]>
https://gitweb.dealii.org/ - dealii.git/log
Matthias Maier [Wed, 16 Oct 2013 07:04:04 +0000 (07:04 +0000)]
Merge trunk into branch_port_the_testsuite
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31249
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Wolfgang Bangerth [Wed, 16 Oct 2013 02:41:43 +0000 (02:41 +0000)]
Avoid 'typename' outside templates.
git-svn-id: https://svn.dealii.org/trunk@31248
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Bruno Turcksin [Wed, 16 Oct 2013 00:06:34 +0000 (00:06 +0000)]
Replace Threads with WorkStream in step-9. Documentation still needs to be updated.
git-svn-id: https://svn.dealii.org/trunk@31247
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Matthias Maier [Tue, 15 Oct 2013 23:49:07 +0000 (23:49 +0000)]
Bugfix: Guard correctly
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31246
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Matthias Maier [Tue, 15 Oct 2013 21:34:40 +0000 (21:34 +0000)]
Nice try, nice try...
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31245
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Matthias Maier [Tue, 15 Oct 2013 21:05:24 +0000 (21:05 +0000)]
Add support for Cygwin64
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31244
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Bruno Turcksin [Tue, 15 Oct 2013 20:28:36 +0000 (20:28 +0000)]
Modify data_out.cc to copy the patches in parrallel.
git-svn-id: https://svn.dealii.org/trunk@31243
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Wolfgang Bangerth [Tue, 15 Oct 2013 18:19:12 +0000 (18:19 +0000)]
Explicitly state source and result files for failing diffs so that it
is easier to find the right files when trying to update tests.
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31242
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Wolfgang Bangerth [Tue, 15 Oct 2013 17:53:28 +0000 (17:53 +0000)]
Adjust output.
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31241
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Bruno Turcksin [Tue, 15 Oct 2013 17:34:45 +0000 (17:34 +0000)]
Replace distance by using SynchronousIterators in derivative_approximation.
git-svn-id: https://svn.dealii.org/trunk@31240
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Wolfgang Bangerth [Tue, 15 Oct 2013 16:27:44 +0000 (16:27 +0000)]
Increase precision to get under numdiffs limit.
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31239
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Wolfgang Bangerth [Tue, 15 Oct 2013 12:54:48 +0000 (12:54 +0000)]
Guard 'noexcept' with appropriate flag.
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31238
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Matthias Maier [Tue, 15 Oct 2013 10:31:54 +0000 (10:31 +0000)]
We indeed need to export TBB_IMPLEMENT_CPP0X=1 more freely. TODO: Is it
safe to export TBB_IMPLEMENT_CPP0X for headers used from an external
library?
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31237
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Matthias Maier [Tue, 15 Oct 2013 10:10:55 +0000 (10:10 +0000)]
Add noexcept(false) also to ~GrowingVectorMemory (and its base class)
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31236
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Matthias Maier [Tue, 15 Oct 2013 10:02:46 +0000 (10:02 +0000)]
Bugfix: Propagate exceptions out of ~Subscriptor in C++11 mode
According to the C++11 standard [class.dtor] 3 in combination with
[except.spec] 14 and [except.spec] 9---as explained in detail in
[1]---we're guilty of just terminating in case of throwing an exception in
a destructor.
[1] http://www.open-std.org/jtc1/sc22/wg21/docs/papers/2010/n3204.htm
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31235
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Matthias Maier [Tue, 15 Oct 2013 08:17:22 +0000 (08:17 +0000)]
Rename DEAL_II_CAN_USE_CXX11 to DEAL_II_USE_CXX11 to make the fact clear that we'll use it..
Provide a compatibility definition of DEAL_II_CAN_USE_CXX11 in config.h.in
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31234
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Wolfgang Bangerth [Mon, 14 Oct 2013 22:16:49 +0000 (22:16 +0000)]
Remove debug output accidentally committed in r31180.
git-svn-id: https://svn.dealii.org/trunk@31233
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Bruno Turcksin [Mon, 14 Oct 2013 21:37:39 +0000 (21:37 +0000)]
Replace the second Threads by WorkStream in matrix_tools.cc
git-svn-id: https://svn.dealii.org/trunk@31232
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Wolfgang Bangerth [Mon, 14 Oct 2013 20:56:11 +0000 (20:56 +0000)]
Fix typo.
git-svn-id: https://svn.dealii.org/trunk@31231
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Bruno Turcksin [Mon, 14 Oct 2013 19:19:08 +0000 (19:19 +0000)]
Replace the first Threads by WorkStream in matrix_tools.cc
git-svn-id: https://svn.dealii.org/trunk@31230
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Matthias Maier [Mon, 14 Oct 2013 14:52:35 +0000 (14:52 +0000)]
Fix an issue with __PRETTY_FUNCTION__ and clang
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31229
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Matthias Maier [Mon, 14 Oct 2013 13:51:52 +0000 (13:51 +0000)]
Workaround an issue with clang and enabled C++11 mode
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31228
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Wolfgang Bangerth [Mon, 14 Oct 2013 13:23:43 +0000 (13:23 +0000)]
Add a comment.
git-svn-id: https://svn.dealii.org/trunk@31227
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Matthias Maier [Mon, 14 Oct 2013 13:12:28 +0000 (13:12 +0000)]
Workaround an issue with bundled tbb and clang in C++11 mode
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31226
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Wolfgang Bangerth [Mon, 14 Oct 2013 13:07:02 +0000 (13:07 +0000)]
Provide at least 7 digits of accuracy so that numdiff with its 6 digits of relative accuracy can work its magic.
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31225
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Wolfgang Bangerth [Mon, 14 Oct 2013 12:19:27 +0000 (12:19 +0000)]
Clarify a couple of items.
git-svn-id: https://svn.dealii.org/trunk@31224
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Wolfgang Bangerth [Mon, 14 Oct 2013 12:01:09 +0000 (12:01 +0000)]
Disable output to console.
git-svn-id: https://svn.dealii.org/trunk@31223
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Wolfgang Bangerth [Mon, 14 Oct 2013 11:57:31 +0000 (11:57 +0000)]
Disable warning #135 on intel compilers.
git-svn-id: https://svn.dealii.org/trunk@31222
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Matthias Maier [Mon, 14 Oct 2013 08:29:31 +0000 (08:29 +0000)]
Bugfix
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31221
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Matthias Maier [Sun, 13 Oct 2013 22:56:58 +0000 (22:56 +0000)]
Export ZLIB version as well
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31216
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Matthias Maier [Sun, 13 Oct 2013 16:21:18 +0000 (16:21 +0000)]
Finish documentation
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31215
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Matthias Maier [Sun, 13 Oct 2013 10:38:51 +0000 (10:38 +0000)]
Delete obsolete files
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31214
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Matthias Maier [Sun, 13 Oct 2013 10:38:48 +0000 (10:38 +0000)]
Merge trunk into branch_port_the_testsuite
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31213
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Martin Kronbichler [Sun, 13 Oct 2013 10:01:42 +0000 (10:01 +0000)]
Announce tutorial program also on news page
git-svn-id: https://svn.dealii.org/trunk@31212
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Matthias Maier [Sat, 12 Oct 2013 19:29:51 +0000 (19:29 +0000)]
Bugfix
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31211
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Matthias Maier [Sat, 12 Oct 2013 19:18:42 +0000 (19:18 +0000)]
Provide MPI version number (and OMPI version number as well)
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31210
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Matthias Maier [Sat, 12 Oct 2013 18:41:21 +0000 (18:41 +0000)]
Add version information for mumps, tbb and umfpack
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31209
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Wolfgang Bangerth [Fri, 11 Oct 2013 14:22:21 +0000 (14:22 +0000)]
Add an instantiation.
git-svn-id: https://svn.dealii.org/trunk@31208
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Matthias Maier [Fri, 11 Oct 2013 14:12:27 +0000 (14:12 +0000)]
Rename (setup|clean|prune)_test to (setup|clean|prune)_tests
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31207
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Wolfgang Bangerth [Fri, 11 Oct 2013 13:25:08 +0000 (13:25 +0000)]
Help some compilers (notably xlC) with name lookup.
git-svn-id: https://svn.dealii.org/trunk@31203
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Wolfgang Bangerth [Fri, 11 Oct 2013 13:02:00 +0000 (13:02 +0000)]
Rewire the reading of the obstacle: either say 'sphere' or 'read from file'.
git-svn-id: https://svn.dealii.org/trunk@31202
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Wolfgang Bangerth [Fri, 11 Oct 2013 12:50:31 +0000 (12:50 +0000)]
Minor cleanup of parameter declaration. Remove the option 'refinement strategy = fixed dofs' from the parameters since it wasn't actually implemented.
git-svn-id: https://svn.dealii.org/trunk@31201
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Matthias Maier [Thu, 10 Oct 2013 22:54:30 +0000 (22:54 +0000)]
Remove unnecessary template qualifier that icc chokes on
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31200
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Matthias Maier [Thu, 10 Oct 2013 22:49:48 +0000 (22:49 +0000)]
Add missing template instantiations
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31199
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Matthias Maier [Thu, 10 Oct 2013 17:35:52 +0000 (17:35 +0000)]
Merge trunk into branch_port_the_testsuite
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31198
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Matthias Maier [Thu, 10 Oct 2013 17:17:18 +0000 (17:17 +0000)]
Disable the "fail" and "a-framework" categories for tests
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31197
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Matthias Maier [Thu, 10 Oct 2013 17:12:27 +0000 (17:12 +0000)]
Add a Nightly branch
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31196
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Bruno Turcksin [Thu, 10 Oct 2013 16:56:19 +0000 (16:56 +0000)]
Use WorkStream instead of Thread in DerivativeApproximation::approximate_derivative.
git-svn-id: https://svn.dealii.org/trunk@31195
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Matthias Maier [Thu, 10 Oct 2013 13:22:02 +0000 (13:22 +0000)]
Refactor test layout: Move all relevant parts of the new testsuite to the source directory so that it can still be run if ./tests is unavailable
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31194
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Matthias Maier [Thu, 10 Oct 2013 08:16:03 +0000 (08:16 +0000)]
Reactivate -O2 for icc-14*
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31193
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Matthias Maier [Wed, 9 Oct 2013 22:52:07 +0000 (22:52 +0000)]
Bugfix
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31192
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Bruno Turcksin [Wed, 9 Oct 2013 21:34:07 +0000 (21:34 +0000)]
Replace Threads by WorkStream in dof_tools_constraints.cc
git-svn-id: https://svn.dealii.org/trunk@31191
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Wolfgang Bangerth [Wed, 9 Oct 2013 19:01:57 +0000 (19:01 +0000)]
Remove test. The functionality of this test can not be verified if we work in directories other than the source directory since there we don't know anything about the file system layout.
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31190
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Wolfgang Bangerth [Wed, 9 Oct 2013 18:53:44 +0000 (18:53 +0000)]
Make other necessary adjustments.
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31189
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Wolfgang Bangerth [Wed, 9 Oct 2013 15:05:39 +0000 (15:05 +0000)]
Fix search path. again.
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31188
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Wolfgang Bangerth [Wed, 9 Oct 2013 15:00:49 +0000 (15:00 +0000)]
Remove top lines with absolute paths.
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31187
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Wolfgang Bangerth [Wed, 9 Oct 2013 14:58:16 +0000 (14:58 +0000)]
Fix search path.
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31186
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Wolfgang Bangerth [Wed, 9 Oct 2013 12:42:30 +0000 (12:42 +0000)]
Rework.
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31185
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Wolfgang Bangerth [Wed, 9 Oct 2013 12:32:54 +0000 (12:32 +0000)]
Only set TMPDIR if it isn't already set.
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31184
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Wolfgang Bangerth [Wed, 9 Oct 2013 12:30:55 +0000 (12:30 +0000)]
Fix typo.
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31183
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Matthias Maier [Wed, 9 Oct 2013 11:58:13 +0000 (11:58 +0000)]
Doc: Introduce two more links and regroup "Home" in the navbar
git-svn-id: https://svn.dealii.org/trunk@31182
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Wolfgang Bangerth [Tue, 8 Oct 2013 20:37:11 +0000 (20:37 +0000)]
Merge from mainline.
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31181
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Timo Heister [Tue, 8 Oct 2013 20:02:32 +0000 (20:02 +0000)]
take over r31179 to mainline
git-svn-id: https://svn.dealii.org/trunk@31180
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Timo Heister [Tue, 8 Oct 2013 20:00:04 +0000 (20:00 +0000)]
check return value of MPI_File_open
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31179
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Wolfgang Bangerth [Tue, 8 Oct 2013 19:47:03 +0000 (19:47 +0000)]
Remove outdated svn:ignore.
git-svn-id: https://svn.dealii.org/trunk@31178
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Wolfgang Bangerth [Tue, 8 Oct 2013 19:46:27 +0000 (19:46 +0000)]
Rework.
git-svn-id: https://svn.dealii.org/trunk@31177
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Wolfgang Bangerth [Tue, 8 Oct 2013 19:37:45 +0000 (19:37 +0000)]
Link to appropriate tag files.
git-svn-id: https://svn.dealii.org/trunk@31176
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Wolfgang Bangerth [Tue, 8 Oct 2013 19:36:00 +0000 (19:36 +0000)]
Slightly reword top note.
git-svn-id: https://svn.dealii.org/trunk@31175
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Wolfgang Bangerth [Tue, 8 Oct 2013 19:34:27 +0000 (19:34 +0000)]
Rework.
git-svn-id: https://svn.dealii.org/trunk@31174
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Wolfgang Bangerth [Tue, 8 Oct 2013 19:03:30 +0000 (19:03 +0000)]
Update some of the information at the bottom. The link to DEAL no
longer works, so delete it.
git-svn-id: https://svn.dealii.org/trunk@31173
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Timo Heister [Tue, 8 Oct 2013 14:37:45 +0000 (14:37 +0000)]
add test for write_vtu_in_parallel
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31172
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Wolfgang Bangerth [Tue, 8 Oct 2013 14:18:30 +0000 (14:18 +0000)]
Improve error message.
git-svn-id: https://svn.dealii.org/trunk@31171
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Wolfgang Bangerth [Tue, 8 Oct 2013 12:46:17 +0000 (12:46 +0000)]
Release mutex on the same thread that acquired it, to satisfy POSIX requirements.
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31170
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Wolfgang Bangerth [Tue, 8 Oct 2013 12:41:27 +0000 (12:41 +0000)]
Run second part of test only if it's different from the first. Adjust test output.
git-svn-id: https://svn.dealii.org/trunk@31169
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Wolfgang Bangerth [Tue, 8 Oct 2013 00:17:45 +0000 (00:17 +0000)]
Implement bilinear interpolation in a much faster way.
git-svn-id: https://svn.dealii.org/trunk@31168
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Wolfgang Bangerth [Mon, 7 Oct 2013 23:52:01 +0000 (23:52 +0000)]
No longer output the residual to output files.
git-svn-id: https://svn.dealii.org/trunk@31167
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Wolfgang Bangerth [Mon, 7 Oct 2013 23:50:20 +0000 (23:50 +0000)]
Compute locally owned active set as intersection of two sets.
git-svn-id: https://svn.dealii.org/trunk@31166
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Timo Heister [Mon, 7 Oct 2013 21:55:54 +0000 (21:55 +0000)]
enhance SparseMatrix documentation
git-svn-id: https://svn.dealii.org/trunk@31165
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Wolfgang Bangerth [Mon, 7 Oct 2013 14:51:55 +0000 (14:51 +0000)]
Minor adjustments.
git-svn-id: https://svn.dealii.org/trunk@31164
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Wolfgang Bangerth [Mon, 7 Oct 2013 13:43:08 +0000 (13:43 +0000)]
Patch by Mayank Subharwal and Andreas Putz: Make GridIn read VTK files as well.
git-svn-id: https://svn.dealii.org/trunk@31163
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Wolfgang Bangerth [Mon, 7 Oct 2013 13:28:39 +0000 (13:28 +0000)]
Search first for the file with its complete given name. I.e., if someone
searches for <mesh.vtk> with additional suffix <.vtk>, then still find the
file if it exists before trying <mesh.vtk.vtk>.
git-svn-id: https://svn.dealii.org/trunk@31162
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Wolfgang Bangerth [Mon, 7 Oct 2013 03:42:41 +0000 (03:42 +0000)]
Rewrite in parts.
git-svn-id: https://svn.dealii.org/trunk@31161
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Wolfgang Bangerth [Mon, 7 Oct 2013 03:08:28 +0000 (03:08 +0000)]
Remove extraneous space.
git-svn-id: https://svn.dealii.org/trunk@31160
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Wolfgang Bangerth [Mon, 7 Oct 2013 02:54:40 +0000 (02:54 +0000)]
Link in step-42.
git-svn-id: https://svn.dealii.org/trunk@31159
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Wolfgang Bangerth [Mon, 7 Oct 2013 02:42:34 +0000 (02:42 +0000)]
Update svn:ignore.
git-svn-id: https://svn.dealii.org/trunk@31158
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Wolfgang Bangerth [Mon, 7 Oct 2013 02:35:51 +0000 (02:35 +0000)]
Finish documenting.
git-svn-id: https://svn.dealii.org/trunk@31157
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Wolfgang Bangerth [Sun, 6 Oct 2013 21:03:56 +0000 (21:03 +0000)]
Comment on solve_newton().
git-svn-id: https://svn.dealii.org/trunk@31155
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Matthias Maier [Sun, 6 Oct 2013 20:00:42 +0000 (20:00 +0000)]
Bugfix: Pick up the Fortran interface for lapack correctly
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31154
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Matthias Maier [Sun, 6 Oct 2013 19:41:34 +0000 (19:41 +0000)]
Bugfix: build_tests should be recompiled if the underlying library changes...
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31153
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Wolfgang Bangerth [Sun, 6 Oct 2013 18:21:36 +0000 (18:21 +0000)]
Fix a bug introduced in the previous version.
git-svn-id: https://svn.dealii.org/trunk@31152
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Matthias Maier [Sat, 5 Oct 2013 22:37:33 +0000 (22:37 +0000)]
Some more documentation
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31151
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Matthias Maier [Sat, 5 Oct 2013 17:25:48 +0000 (17:25 +0000)]
First part of documentation
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31150
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Toby D. Young [Sat, 5 Oct 2013 16:08:10 +0000 (16:08 +0000)]
Switch Assert to AssertThrow where a PETScInternalError can occur.
git-svn-id: https://svn.dealii.org/trunk@31149
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Matthias Maier [Sat, 5 Oct 2013 15:03:16 +0000 (15:03 +0000)]
Doc: Update CMake documentation. Add a section about configuration and
building, reflect recent changes
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31148
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Matthias Maier [Sat, 5 Oct 2013 13:01:10 +0000 (13:01 +0000)]
Doc: Rearrange two paragraphs
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31147
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Matthias Maier [Sat, 5 Oct 2013 12:59:41 +0000 (12:59 +0000)]
Update readme on Windows support and minimal gcc version
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31146
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Matthias Maier [Sat, 5 Oct 2013 12:32:43 +0000 (12:32 +0000)]
Merge trunk into branch_port_the_testsuite
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31145
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Wolfgang Bangerth [Sat, 5 Oct 2013 12:17:40 +0000 (12:17 +0000)]
Move forward.
git-svn-id: https://svn.dealii.org/trunk@31144
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Guido Kanschat [Sat, 5 Oct 2013 11:48:41 +0000 (11:48 +0000)]
add Stephan's paper
git-svn-id: https://svn.dealii.org/trunk@31143
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Matthias Maier [Sat, 5 Oct 2013 11:46:11 +0000 (11:46 +0000)]
Make clang happy
git-svn-id: https://svn.dealii.org/branches/branch_port_the_testsuite@31142
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