]>
https://gitweb.dealii.org/ - dealii-svn.git/log
bangerth [Mon, 12 Sep 2011 01:27:16 +0000 (01:27 +0000)]
Fix an oversight.
git-svn-id: https://svn.dealii.org/trunk@24308
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bangerth [Mon, 12 Sep 2011 01:27:06 +0000 (01:27 +0000)]
Assert that the file we read in fact exists.
git-svn-id: https://svn.dealii.org/trunk@24307
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bangerth [Sun, 11 Sep 2011 18:13:23 +0000 (18:13 +0000)]
Avoid a race condition by making sure temp files are unique between runs with different numbers of processors.
git-svn-id: https://svn.dealii.org/trunk@24306
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bangerth [Sun, 11 Sep 2011 17:56:41 +0000 (17:56 +0000)]
Delete temporary file after concatenating it to deallog.
git-svn-id: https://svn.dealii.org/trunk@24305
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bangerth [Sun, 11 Sep 2011 05:44:26 +0000 (05:44 +0000)]
Use the cell->is_locally_owned() predicate introduced in the previous patch.
git-svn-id: https://svn.dealii.org/trunk@24304
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bangerth [Sun, 11 Sep 2011 05:10:03 +0000 (05:10 +0000)]
Add a function cell->is_locally_owned.
git-svn-id: https://svn.dealii.org/trunk@24303
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bangerth [Sun, 11 Sep 2011 04:26:13 +0000 (04:26 +0000)]
Fix markup.
git-svn-id: https://svn.dealii.org/trunk@24302
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young [Sat, 10 Sep 2011 18:01:38 +0000 (18:01 +0000)]
Additional data for SLEPcWrappers Arnoldi solver
git-svn-id: https://svn.dealii.org/trunk@24301
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young [Sat, 10 Sep 2011 10:21:59 +0000 (10:21 +0000)]
Catch another possible EPS failure
git-svn-id: https://svn.dealii.org/trunk@24300
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bangerth [Sat, 10 Sep 2011 04:56:42 +0000 (04:56 +0000)]
Expand message issued in case of an error by stating where more information is hidden.
git-svn-id: https://svn.dealii.org/trunk@24299
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kanschat [Fri, 9 Sep 2011 20:28:11 +0000 (20:28 +0000)]
add structure to documentation
git-svn-id: https://svn.dealii.org/trunk@24298
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bangerth [Fri, 9 Sep 2011 04:12:49 +0000 (04:12 +0000)]
Move things local to each program into a local namespace.
git-svn-id: https://svn.dealii.org/trunk@24297
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bangerth [Fri, 9 Sep 2011 04:04:21 +0000 (04:04 +0000)]
Remove 'typename' when not in a template.
git-svn-id: https://svn.dealii.org/trunk@24296
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bangerth [Fri, 9 Sep 2011 04:02:31 +0000 (04:02 +0000)]
Move things local to each program into a local namespace.
git-svn-id: https://svn.dealii.org/trunk@24295
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bangerth [Fri, 9 Sep 2011 03:57:13 +0000 (03:57 +0000)]
Use the standard form main() function.
git-svn-id: https://svn.dealii.org/trunk@24294
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bangerth [Fri, 9 Sep 2011 03:55:52 +0000 (03:55 +0000)]
Move things local to each program into a local namespace.
git-svn-id: https://svn.dealii.org/trunk@24293
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bangerth [Fri, 9 Sep 2011 03:20:13 +0000 (03:20 +0000)]
Use the main() function used by step-6 and forward, rather than the old and
unsafe one from step-4.
git-svn-id: https://svn.dealii.org/trunk@24292
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bangerth [Fri, 9 Sep 2011 03:17:50 +0000 (03:17 +0000)]
Move things local to each program into a local namespace.
git-svn-id: https://svn.dealii.org/trunk@24291
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bangerth [Fri, 9 Sep 2011 02:25:35 +0000 (02:25 +0000)]
New test.
git-svn-id: https://svn.dealii.org/trunk@24290
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bangerth [Fri, 9 Sep 2011 02:24:14 +0000 (02:24 +0000)]
Add a comment.
git-svn-id: https://svn.dealii.org/trunk@24289
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bangerth [Fri, 9 Sep 2011 02:23:06 +0000 (02:23 +0000)]
Patch by Daniel Castanon Quiroz: Implement generating a torus and describing the boundary.
git-svn-id: https://svn.dealii.org/trunk@24288
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young [Thu, 8 Sep 2011 09:13:53 +0000 (09:13 +0000)]
Minor bug fix
git-svn-id: https://svn.dealii.org/trunk@24287
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bangerth [Thu, 8 Sep 2011 04:43:50 +0000 (04:43 +0000)]
Lower tolerance.
git-svn-id: https://svn.dealii.org/trunk@24286
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bangerth [Thu, 8 Sep 2011 03:31:09 +0000 (03:31 +0000)]
Add new test.
git-svn-id: https://svn.dealii.org/trunk@24285
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bangerth [Thu, 8 Sep 2011 00:12:07 +0000 (00:12 +0000)]
Mark the conversion constructor explicit, to avoid any confusion.
git-svn-id: https://svn.dealii.org/trunk@24284
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bangerth [Thu, 8 Sep 2011 00:10:27 +0000 (00:10 +0000)]
Add member functions that make the TLS object look more like the underlying object on the current thread.
git-svn-id: https://svn.dealii.org/trunk@24283
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bangerth [Wed, 7 Sep 2011 23:58:11 +0000 (23:58 +0000)]
Add some more commentary.
git-svn-id: https://svn.dealii.org/trunk@24282
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bangerth [Wed, 7 Sep 2011 23:21:05 +0000 (23:21 +0000)]
Fix by Patrick Sodre: FEFieldFunction was not thread-safe due to the cell_hint cache (a mutable variable) that different threads kept stomping on. This is now fixed using a thread-local variable.
git-svn-id: https://svn.dealii.org/trunk@24281
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bangerth [Wed, 7 Sep 2011 22:29:45 +0000 (22:29 +0000)]
Have a way to escape expansion of step-xx in situations where we don't want to expand because in that context doxygen would not resolve the explicit reference. Use this mechanism in a bunch of places in the tutorial.
git-svn-id: https://svn.dealii.org/trunk@24280
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bangerth [Wed, 7 Sep 2011 21:45:38 +0000 (21:45 +0000)]
Rename test.
git-svn-id: https://svn.dealii.org/trunk@24279
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bangerth [Wed, 7 Sep 2011 21:42:21 +0000 (21:42 +0000)]
Add comment on what the test actually does.
git-svn-id: https://svn.dealii.org/trunk@24278
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bangerth [Wed, 7 Sep 2011 19:45:49 +0000 (19:45 +0000)]
Use a way to reference labels that will not lead to them being escaped.
git-svn-id: https://svn.dealii.org/trunk@24277
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bangerth [Tue, 6 Sep 2011 20:56:51 +0000 (20:56 +0000)]
Make compile with older compilers.
git-svn-id: https://svn.dealii.org/trunk@24276
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kanschat [Tue, 6 Sep 2011 16:33:12 +0000 (16:33 +0000)]
Use only files needed and add documantation
git-svn-id: https://svn.dealii.org/trunk@24275
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kanschat [Tue, 6 Sep 2011 16:26:24 +0000 (16:26 +0000)]
...and thnings compile again
git-svn-id: https://svn.dealii.org/trunk@24274
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kanschat [Tue, 6 Sep 2011 16:15:40 +0000 (16:15 +0000)]
start splitting assembler.h
git-svn-id: https://svn.dealii.org/trunk@24273
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kanschat [Tue, 6 Sep 2011 16:01:55 +0000 (16:01 +0000)]
split template file
git-svn-id: https://svn.dealii.org/trunk@24272
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kanschat [Tue, 6 Sep 2011 15:56:41 +0000 (15:56 +0000)]
eliminate old style includes for meshworker
git-svn-id: https://svn.dealii.org/trunk@24271
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kanschat [Tue, 6 Sep 2011 15:43:55 +0000 (15:43 +0000)]
compatibility file for last move
git-svn-id: https://svn.dealii.org/trunk@24270
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kanschat [Tue, 6 Sep 2011 15:39:23 +0000 (15:39 +0000)]
move next file
git-svn-id: https://svn.dealii.org/trunk@24269
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kanschat [Tue, 6 Sep 2011 15:37:35 +0000 (15:37 +0000)]
move next file
git-svn-id: https://svn.dealii.org/trunk@24268
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kanschat [Tue, 6 Sep 2011 15:36:20 +0000 (15:36 +0000)]
move next file
git-svn-id: https://svn.dealii.org/trunk@24267
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kanschat [Tue, 6 Sep 2011 15:33:32 +0000 (15:33 +0000)]
re-add file with diversion
git-svn-id: https://svn.dealii.org/trunk@24266
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kanschat [Tue, 6 Sep 2011 15:02:58 +0000 (15:02 +0000)]
Fix some obvious nonsense in the documentation
git-svn-id: https://svn.dealii.org/trunk@24265
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young [Tue, 6 Sep 2011 12:33:37 +0000 (12:33 +0000)]
Fix SLEPc libraries for slepc-dev
git-svn-id: https://svn.dealii.org/trunk@24264
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young [Tue, 6 Sep 2011 12:14:00 +0000 (12:14 +0000)]
Make compiling scripts pretty (align=)
git-svn-id: https://svn.dealii.org/trunk@24263
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young [Tue, 6 Sep 2011 10:19:18 +0000 (10:19 +0000)]
Stop configure making stuff up about PETSc
git-svn-id: https://svn.dealii.org/trunk@24262
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young [Tue, 6 Sep 2011 09:21:48 +0000 (09:21 +0000)]
Upgrade SLEPc to petsc/slepc-dev
git-svn-id: https://svn.dealii.org/trunk@24261
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young [Tue, 6 Sep 2011 09:10:59 +0000 (09:10 +0000)]
Put missing petsc-dev upgrade in
git-svn-id: https://svn.dealii.org/trunk@24260
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young [Tue, 6 Sep 2011 08:25:06 +0000 (08:25 +0000)]
Upgrade petsc solvers to petsc-dev
git-svn-id: https://svn.dealii.org/trunk@24259
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young [Tue, 6 Sep 2011 08:23:59 +0000 (08:23 +0000)]
Upgrade PETSc matrices to petsc-dev
git-svn-id: https://svn.dealii.org/trunk@24258
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young [Tue, 6 Sep 2011 08:23:07 +0000 (08:23 +0000)]
Upgrade PETSc vectors to petsc-dev
git-svn-id: https://svn.dealii.org/trunk@24257
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young [Tue, 6 Sep 2011 07:50:48 +0000 (07:50 +0000)]
Function check for PETSc dev - looks like version checks
git-svn-id: https://svn.dealii.org/trunk@24256
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young [Tue, 6 Sep 2011 07:39:06 +0000 (07:39 +0000)]
Function check for PETSc dev - looks like version checks
git-svn-id: https://svn.dealii.org/trunk@24255
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kanschat [Mon, 5 Sep 2011 19:13:04 +0000 (19:13 +0000)]
move assember file
git-svn-id: https://svn.dealii.org/trunk@24254
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kanschat [Mon, 5 Sep 2011 19:05:36 +0000 (19:05 +0000)]
svn had swallowed these
git-svn-id: https://svn.dealii.org/trunk@24253
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heister [Mon, 5 Sep 2011 15:34:35 +0000 (15:34 +0000)]
update mesh_conversion readme
git-svn-id: https://svn.dealii.org/trunk@24252
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heister [Mon, 5 Sep 2011 15:28:02 +0000 (15:28 +0000)]
super simple test script for the mesh_conversion tool
git-svn-id: https://svn.dealii.org/trunk@24251
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heister [Mon, 5 Sep 2011 15:26:36 +0000 (15:26 +0000)]
update cubit/abaqus mesh conversion tool and update example files.
git-svn-id: https://svn.dealii.org/trunk@24250
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young [Mon, 5 Sep 2011 09:19:15 +0000 (09:19 +0000)]
Update check for PETSC_VERSION
git-svn-id: https://svn.dealii.org/trunk@24249
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young [Sun, 4 Sep 2011 17:26:31 +0000 (17:26 +0000)]
Fix no-effect statement
git-svn-id: https://svn.dealii.org/trunk@24248
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young [Sun, 4 Sep 2011 17:20:00 +0000 (17:20 +0000)]
Fix header includes in meshworker
git-svn-id: https://svn.dealii.org/trunk@24247
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kanschat [Sat, 3 Sep 2011 17:50:53 +0000 (17:50 +0000)]
start moving meshworkwer
git-svn-id: https://svn.dealii.org/trunk@24246
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bangerth [Sat, 3 Sep 2011 00:23:29 +0000 (00:23 +0000)]
Implement GridTools::volume.
git-svn-id: https://svn.dealii.org/trunk@24245
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bangerth [Sat, 3 Sep 2011 00:04:52 +0000 (00:04 +0000)]
New test.
git-svn-id: https://svn.dealii.org/trunk@24244
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bangerth [Fri, 2 Sep 2011 23:48:30 +0000 (23:48 +0000)]
Remove some specializations for 1d since the generic code now also works for 1d.
git-svn-id: https://svn.dealii.org/trunk@24243
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kronbichler [Fri, 2 Sep 2011 09:47:37 +0000 (09:47 +0000)]
Correct number of global refinements: should be five.
git-svn-id: https://svn.dealii.org/trunk@24232
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kronbichler [Wed, 31 Aug 2011 13:32:11 +0000 (13:32 +0000)]
Fix stabilization for alpha=2: need to weight by entropy then. Also, the entropy needs to be computed against the average temperature.
git-svn-id: https://svn.dealii.org/trunk@24229
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bangerth [Wed, 31 Aug 2011 13:00:07 +0000 (13:00 +0000)]
Add a link. Fix a duplicate word.
git-svn-id: https://svn.dealii.org/trunk@24228
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bangerth [Wed, 31 Aug 2011 11:30:40 +0000 (11:30 +0000)]
Add missing header file and update test output.
git-svn-id: https://svn.dealii.org/trunk@24227
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bangerth [Wed, 31 Aug 2011 11:30:33 +0000 (11:30 +0000)]
Add missing header file and update test output.
git-svn-id: https://svn.dealii.org/trunk@24226
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bangerth [Wed, 31 Aug 2011 03:09:10 +0000 (03:09 +0000)]
Remove another test that is now no longer useful after r24219.
git-svn-id: https://svn.dealii.org/trunk@24225
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bangerth [Wed, 31 Aug 2011 01:19:35 +0000 (01:19 +0000)]
Implement getting and setting boundary indicators of triangulations in 1d as well.
git-svn-id: https://svn.dealii.org/trunk@24224
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bangerth [Tue, 30 Aug 2011 23:55:09 +0000 (23:55 +0000)]
New test.
git-svn-id: https://svn.dealii.org/trunk@24223
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bangerth [Tue, 30 Aug 2011 23:07:33 +0000 (23:07 +0000)]
Fix cut'n'pasto in exception message.
git-svn-id: https://svn.dealii.org/trunk@24222
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bangerth [Tue, 30 Aug 2011 23:06:29 +0000 (23:06 +0000)]
Remove tests that are no longer supported.
git-svn-id: https://svn.dealii.org/trunk@24221
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bangerth [Tue, 30 Aug 2011 23:05:34 +0000 (23:05 +0000)]
New test.
git-svn-id: https://svn.dealii.org/trunk@24220
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bangerth [Tue, 30 Aug 2011 19:14:51 +0000 (19:14 +0000)]
No longer try to call PETScWrappers::MatrixBase::compress() automatically, but instead only error out if the user tries to do something that won't work.
git-svn-id: https://svn.dealii.org/trunk@24219
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kanschat [Tue, 30 Aug 2011 16:30:56 +0000 (16:30 +0000)]
bibtex and standardize
git-svn-id: https://svn.dealii.org/trunk@24218
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bangerth [Tue, 30 Aug 2011 16:10:43 +0000 (16:10 +0000)]
Fix typo.
git-svn-id: https://svn.dealii.org/trunk@24217
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kanschat [Tue, 30 Aug 2011 15:49:18 +0000 (15:49 +0000)]
update papers
git-svn-id: https://svn.dealii.org/trunk@24216
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bangerth [Tue, 30 Aug 2011 15:08:52 +0000 (15:08 +0000)]
Restore the previous precision and width of the stream after printing a timer summary.
git-svn-id: https://svn.dealii.org/trunk@24215
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heister [Tue, 30 Aug 2011 14:43:11 +0000 (14:43 +0000)]
fixed ConstraintMatrix::distribute() when a CPU has no own DoFs
git-svn-id: https://svn.dealii.org/trunk@24214
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bangerth [Tue, 30 Aug 2011 00:04:12 +0000 (00:04 +0000)]
Adjust output files for computing the exact boundary normal in no_normal_flux (r24198).
git-svn-id: https://svn.dealii.org/trunk@24213
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heister [Mon, 29 Aug 2011 22:24:36 +0000 (22:24 +0000)]
fix test output
git-svn-id: https://svn.dealii.org/trunk@24212
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heister [Mon, 29 Aug 2011 22:24:30 +0000 (22:24 +0000)]
fix bug in parallel::distributed::GridRefinement for a mesh with less cells than CPUs involved.
git-svn-id: https://svn.dealii.org/trunk@24211
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heister [Mon, 29 Aug 2011 22:18:26 +0000 (22:18 +0000)]
document bug in parallel::distributed::refine_and_coarsen*() with more CPUs than cells
git-svn-id: https://svn.dealii.org/trunk@24210
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heister [Mon, 29 Aug 2011 21:59:20 +0000 (21:59 +0000)]
add test that documents unwanted PETSc::MPI::SparseMatrix behavior. Currently disabled, because it hangs
git-svn-id: https://svn.dealii.org/trunk@24209
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bangerth [Mon, 29 Aug 2011 20:31:51 +0000 (20:31 +0000)]
Remove two macros we apparently don't need.
git-svn-id: https://svn.dealii.org/trunk@24208
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bangerth [Mon, 29 Aug 2011 17:37:19 +0000 (17:37 +0000)]
Reduce the number of cells being refined. Make it compile with gcc 4.1.
git-svn-id: https://svn.dealii.org/trunk@24207
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kronbichler [Fri, 26 Aug 2011 11:25:04 +0000 (11:25 +0000)]
Speed up dof_indices_with_subdomain_association.
git-svn-id: https://svn.dealii.org/trunk@24206
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bangerth [Thu, 25 Aug 2011 20:35:25 +0000 (20:35 +0000)]
Do not use typename outside of templates.
git-svn-id: https://svn.dealii.org/trunk@24205
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bangerth [Thu, 25 Aug 2011 19:13:52 +0000 (19:13 +0000)]
New test.
git-svn-id: https://svn.dealii.org/trunk@24204
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bangerth [Thu, 25 Aug 2011 19:13:06 +0000 (19:13 +0000)]
Leave two TODOs.
git-svn-id: https://svn.dealii.org/trunk@24203
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bangerth [Thu, 25 Aug 2011 19:02:42 +0000 (19:02 +0000)]
Add Utilities::string_to_double.
git-svn-id: https://svn.dealii.org/trunk@24202
0785d39b -7218-0410-832d-
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heister [Thu, 25 Aug 2011 16:34:19 +0000 (16:34 +0000)]
make test more reliable by moving the temporary files into the ncpu_*
directory. This way the test can be run at the same time for different
cpu counts.
git-svn-id: https://svn.dealii.org/trunk@24201
0785d39b -7218-0410-832d-
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heister [Thu, 25 Aug 2011 16:19:37 +0000 (16:19 +0000)]
make test more reliable by skipping writing/reading from files. It failed if run with different processor counts at the same time.
git-svn-id: https://svn.dealii.org/trunk@24200
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bangerth [Thu, 25 Aug 2011 16:15:24 +0000 (16:15 +0000)]
Ignore kdevelop4 project files throughout a bunch of directories.
git-svn-id: https://svn.dealii.org/trunk@24199
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bangerth [Thu, 25 Aug 2011 16:03:13 +0000 (16:03 +0000)]
Compute normal vectors in no_normal_flux by querying the Boundary object, rather than the Mapping object.
git-svn-id: https://svn.dealii.org/trunk@24198
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bangerth [Thu, 25 Aug 2011 15:51:59 +0000 (15:51 +0000)]
Add Boundary::normal_vector. Implement it. Test it.
git-svn-id: https://svn.dealii.org/trunk@24197
0785d39b -7218-0410-832d-
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