]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
4 years agoMerge pull request #9624 from peterrum/ExcNeedsMPI
Martin Kronbichler [Fri, 6 Mar 2020 10:05:41 +0000 (11:05 +0100)]
Merge pull request #9624 from peterrum/ExcNeedsMPI

Introduce and use new ExcNeedsMPI

4 years agoIntoduce and use new ExcNeedsMPI 9624/head
Peter Munch [Thu, 5 Mar 2020 10:27:14 +0000 (11:27 +0100)]
Intoduce and use new ExcNeedsMPI

4 years agoMerge pull request #9585 from tjhei/use_global_cell_index_typedef
Wolfgang Bangerth [Fri, 6 Mar 2020 03:06:49 +0000 (04:06 +0100)]
Merge pull request #9585 from tjhei/use_global_cell_index_typedef

use global_cell_index in many places

4 years agoMerge pull request #9628 from bangerth/69
David Wells [Fri, 6 Mar 2020 02:25:39 +0000 (21:25 -0500)]
Merge pull request #9628 from bangerth/69

Reference step-69 in a couple of places.

4 years agoMerge pull request #9580 from MFraters/add_rank_2_tensor_orthogonalization_function
Wolfgang Bangerth [Thu, 5 Mar 2020 23:26:36 +0000 (00:26 +0100)]
Merge pull request #9580 from MFraters/add_rank_2_tensor_orthogonalization_function

Add rank 2 tensor orthogonalization function

4 years agoReference step-69 in a couple of places. 9628/head
Wolfgang Bangerth [Thu, 5 Mar 2020 23:23:27 +0000 (16:23 -0700)]
Reference step-69 in a couple of places.

4 years agoMerge pull request #9622 from bangerth/vertex_indices
Daniel Arndt [Thu, 5 Mar 2020 22:27:41 +0000 (17:27 -0500)]
Merge pull request #9622 from bangerth/vertex_indices

Introduce GeometryInfo::vertex_indices()

4 years agoMerge pull request #9614 from tjhei/cleanup_check_indentation.sh
David Wells [Thu, 5 Mar 2020 20:45:44 +0000 (15:45 -0500)]
Merge pull request #9614 from tjhei/cleanup_check_indentation.sh

cleanup and document check_indentation.sh

4 years agoMerge pull request #9625 from drwells/add-missing-boost-header
Wolfgang Bangerth [Thu, 5 Mar 2020 17:14:27 +0000 (18:14 +0100)]
Merge pull request #9625 from drwells/add-missing-boost-header

Add a missing boost header.

4 years agoAdd a missing boost header. 9625/head
David Wells [Thu, 5 Mar 2020 15:20:02 +0000 (10:20 -0500)]
Add a missing boost header.

4 years agoUse GeometryInfo::vertex_indices() in tests/. 9622/head
Wolfgang Bangerth [Thu, 5 Mar 2020 01:46:51 +0000 (18:46 -0700)]
Use GeometryInfo::vertex_indices() in tests/.

4 years agoMerge pull request #9616 from bangerth/active_cell_iterators-2
Martin Kronbichler [Thu, 5 Mar 2020 08:22:33 +0000 (09:22 +0100)]
Merge pull request #9616 from bangerth/active_cell_iterators-2

More active_cell_iterators().

4 years agoMerge pull request #9600 from peterrum/ca_move_to_new_file
Martin Kronbichler [Thu, 5 Mar 2020 08:11:49 +0000 (09:11 +0100)]
Merge pull request #9600 from peterrum/ca_move_to_new_file

Move ConsensusAlgorithm related functions to mpi_consensus_algorithm.h

4 years agoUse GeometryInfo::vertex_indices() in include/ and source/.
Wolfgang Bangerth [Thu, 5 Mar 2020 01:46:38 +0000 (18:46 -0700)]
Use GeometryInfo::vertex_indices() in include/ and source/.

4 years agoAdd a changelog entry.
Wolfgang Bangerth [Wed, 4 Mar 2020 22:30:44 +0000 (15:30 -0700)]
Add a changelog entry.

4 years agoAdd GeometryInfo::vertex_indices().
Wolfgang Bangerth [Wed, 4 Mar 2020 22:29:17 +0000 (15:29 -0700)]
Add GeometryInfo::vertex_indices().

4 years agoMerge pull request #9619 from bangerth/warnings
Daniel Arndt [Thu, 5 Mar 2020 04:27:40 +0000 (23:27 -0500)]
Merge pull request #9619 from bangerth/warnings

Avoid a bunch of warnings in release mode.

4 years agoMerge pull request #9615 from tjhei/cleanup_shell_scripts
David Wells [Thu, 5 Mar 2020 02:38:17 +0000 (21:38 -0500)]
Merge pull request #9615 from tjhei/cleanup_shell_scripts

shell script: fix some shellcheck warnings

4 years agoFix tester: remove constant expression. 9580/head
Menno Fraters [Tue, 3 Mar 2020 04:32:33 +0000 (20:32 -0800)]
Fix tester: remove constant expression.

4 years agoAvoid a bunch of warnings in release mode. 9619/head
Wolfgang Bangerth [Wed, 4 Mar 2020 17:50:52 +0000 (10:50 -0700)]
Avoid a bunch of warnings in release mode.

4 years agoMove ConsensusAlgorithm related functions to mpi_consensus_algorithm.h 9600/head
Peter Munch [Tue, 3 Mar 2020 10:10:10 +0000 (11:10 +0100)]
Move ConsensusAlgorithm related functions to mpi_consensus_algorithm.h

4 years agoexpand testing
Menno Fraters [Fri, 28 Feb 2020 23:50:57 +0000 (15:50 -0800)]
expand testing

4 years agoadress Wolfgangs comments.
Menno Fraters [Fri, 28 Feb 2020 22:42:40 +0000 (14:42 -0800)]
adress Wolfgangs comments.

4 years agoMore active_cell_iterators(). 9616/head
Wolfgang Bangerth [Wed, 4 Mar 2020 15:54:47 +0000 (08:54 -0700)]
More active_cell_iterators().

4 years agoaddress comments 9585/head
Timo Heister [Mon, 2 Mar 2020 01:57:45 +0000 (20:57 -0500)]
address comments

4 years agouse global_cell_index in many places
Timo Heister [Sun, 1 Mar 2020 19:58:34 +0000 (14:58 -0500)]
use global_cell_index in many places

4 years agoMerge pull request #9586 from bangerth/global_cell_index
Timo Heister [Wed, 4 Mar 2020 15:53:21 +0000 (10:53 -0500)]
Merge pull request #9586 from bangerth/global_cell_index

Introduce types::global_cell_index.

4 years agoshell script: fix some shellcheck warnings 9615/head
Timo Heister [Wed, 4 Mar 2020 15:50:54 +0000 (10:50 -0500)]
shell script: fix some shellcheck warnings

4 years agocleanup and document check_indentation.sh 9614/head
Timo Heister [Wed, 4 Mar 2020 15:37:01 +0000 (10:37 -0500)]
cleanup and document check_indentation.sh

4 years agoMerge pull request #9612 from tjhei/fix_check_doxygen_script
Daniel Arndt [Wed, 4 Mar 2020 13:37:09 +0000 (08:37 -0500)]
Merge pull request #9612 from tjhei/fix_check_doxygen_script

CI: fix check_indentation.sh script

4 years agoCI: fix check_indentation.sh script 9612/head
Timo Heister [Wed, 4 Mar 2020 13:16:24 +0000 (08:16 -0500)]
CI: fix check_indentation.sh script

Due to the addition of check_doxygen.sh we were not checking the return
value of git diff. This means the travis check would pass even though
there was a diff.

4 years agoMerge pull request #9611 from peterrum/fix_indent
Martin Kronbichler [Wed, 4 Mar 2020 11:07:48 +0000 (12:07 +0100)]
Merge pull request #9611 from peterrum/fix_indent

[URGENT] Fix indentation in step-8

4 years agoFix indentation in step-8 9611/head
Peter Munch [Wed, 4 Mar 2020 10:04:05 +0000 (11:04 +0100)]
Fix indentation in step-8

4 years agoMerge pull request #9584 from tjhei/ci_jenkins_set_ex
Daniel Arndt [Wed, 4 Mar 2020 03:41:45 +0000 (22:41 -0500)]
Merge pull request #9584 from tjhei/ci_jenkins_set_ex

CI: Jenkins: set -x and set -e

4 years agoMerge pull request #9602 from kronbichler/fix_fe_eval_constraints
Timo Heister [Wed, 4 Mar 2020 03:07:22 +0000 (22:07 -0500)]
Merge pull request #9602 from kronbichler/fix_fe_eval_constraints

Fix bug in FEEvaluation for constraints in face integrals

4 years agoMerge pull request #9601 from bangerth/8
Timo Heister [Wed, 4 Mar 2020 03:04:45 +0000 (22:04 -0500)]
Merge pull request #9601 from bangerth/8

Augment the introduction of step-8.

4 years agoAdd a changelog entry. 9586/head
Wolfgang Bangerth [Mon, 2 Mar 2020 03:51:02 +0000 (20:51 -0700)]
Add a changelog entry.

4 years agoCompress documentation.
Wolfgang Bangerth [Mon, 2 Mar 2020 20:01:53 +0000 (13:01 -0700)]
Compress documentation.

4 years agoIntroduce types::global_cell_index.
Wolfgang Bangerth [Mon, 2 Mar 2020 03:40:12 +0000 (20:40 -0700)]
Introduce types::global_cell_index.

While there, also clean up a bit of the documentation around that point
in the file.

4 years agoUse \mathbf C to denote the stress-strain tensor. 9601/head
Wolfgang Bangerth [Wed, 4 Mar 2020 01:23:58 +0000 (18:23 -0700)]
Use \mathbf C to denote the stress-strain tensor.

4 years agoAugment the introduction of step-8.
Wolfgang Bangerth [Tue, 3 Mar 2020 13:46:41 +0000 (06:46 -0700)]
Augment the introduction of step-8.

We should make the connection to the Laplace equation a bit clearer, and also
introduce some of the notation we use there.

4 years agoMerge pull request #9605 from bangerth/simplify
Daniel Arndt [Tue, 3 Mar 2020 23:23:14 +0000 (18:23 -0500)]
Merge pull request #9605 from bangerth/simplify

Simplify a piece of code.

4 years agoMerge pull request #9608 from tjhei/table_handler_uint64_doc
Wolfgang Bangerth [Tue, 3 Mar 2020 23:23:06 +0000 (00:23 +0100)]
Merge pull request #9608 from tjhei/table_handler_uint64_doc

doc: TableHandler uint_64 type

4 years agodoc: TableHandler uint_64 type 9608/head
Timo Heister [Tue, 3 Mar 2020 22:26:20 +0000 (17:26 -0500)]
doc: TableHandler uint_64 type

It looks like we never mentioned that this type is available.

4 years agoMerge pull request #9604 from peterrum/ConsensusAlgorithmProcessTargets_fixtype
Timo Heister [Tue, 3 Mar 2020 21:44:10 +0000 (16:44 -0500)]
Merge pull request #9604 from peterrum/ConsensusAlgorithmProcessTargets_fixtype

Fix type of ConsensusAlgorithmProcessTargets

4 years agoMerge pull request #9606 from tjhei/doxygen_warnings
Wolfgang Bangerth [Tue, 3 Mar 2020 19:56:59 +0000 (20:56 +0100)]
Merge pull request #9606 from tjhei/doxygen_warnings

fix some doxygen warnings

4 years agoMerge pull request #9603 from bangerth/face_indices
Daniel Arndt [Tue, 3 Mar 2020 19:12:57 +0000 (14:12 -0500)]
Merge pull request #9603 from bangerth/face_indices

Convert explicit loops over faces to range-based loops.

4 years agoComment some code and add aliases for readability 9602/head
Martin Kronbichler [Tue, 3 Mar 2020 19:12:46 +0000 (20:12 +0100)]
Comment some code and add aliases for readability

4 years agofix some doxygen warnings 9606/head
Timo Heister [Tue, 3 Mar 2020 19:00:32 +0000 (14:00 -0500)]
fix some doxygen warnings

4 years agoSimplify a piece of code. 9605/head
Wolfgang Bangerth [Tue, 3 Mar 2020 18:39:42 +0000 (11:39 -0700)]
Simplify a piece of code.

4 years agoFix type of ConsensusAlgorithmProcessTargets 9604/head
Peter Munch [Tue, 3 Mar 2020 18:19:21 +0000 (19:19 +0100)]
Fix type of ConsensusAlgorithmProcessTargets

4 years agoMerge pull request #9592 from tjhei/ci_test64bit
Wolfgang Bangerth [Tue, 3 Mar 2020 16:49:06 +0000 (17:49 +0100)]
Merge pull request #9592 from tjhei/ci_test64bit

CI: github action: test 64bit indices

4 years agoChangelog
Martin Kronbichler [Tue, 3 Mar 2020 13:52:45 +0000 (14:52 +0100)]
Changelog

4 years agoAdd test case
Martin Kronbichler [Tue, 3 Mar 2020 13:52:34 +0000 (14:52 +0100)]
Add test case

4 years agoFix bug in FEEvaluation for constraints in face integrals
Martin Kronbichler [Tue, 3 Mar 2020 13:52:24 +0000 (14:52 +0100)]
Fix bug in FEEvaluation for constraints in face integrals

4 years agoMerge pull request #9593 from nfehn/master
Martin Kronbichler [Tue, 3 Mar 2020 13:40:35 +0000 (14:40 +0100)]
Merge pull request #9593 from nfehn/master

remove redundancy from MGTransfer

4 years agoMerge pull request #9556 from peterrum/vectorized_transposed
Martin Kronbichler [Tue, 3 Mar 2020 13:33:00 +0000 (14:33 +0100)]
Merge pull request #9556 from peterrum/vectorized_transposed

Add new vectorized_load_and_transpose and vectorized_transpose_and_store

4 years agoMerge pull request #9599 from kronbichler/another_longlong_fix
Wolfgang Bangerth [Tue, 3 Mar 2020 12:55:42 +0000 (13:55 +0100)]
Merge pull request #9599 from kronbichler/another_longlong_fix

Add overload for logstream's << for uint64_t

4 years agoAdd new vectorized_load_and_transpose and vectorized_transpose_and_store 9556/head
Peter Munch [Thu, 20 Feb 2020 22:28:53 +0000 (23:28 +0100)]
Add new vectorized_load_and_transpose and vectorized_transpose_and_store

4 years agoAdd overload for logstream's << for uint64_t 9599/head
Martin Kronbichler [Tue, 3 Mar 2020 08:49:53 +0000 (09:49 +0100)]
Add overload for logstream's << for uint64_t

4 years agoMGTransfer: don't repeat yourself 9593/head
Niklas Fehn [Mon, 2 Mar 2020 17:06:58 +0000 (18:06 +0100)]
MGTransfer: don't repeat yourself

4 years agoMerge pull request #9557 from dangars/fix_equation_step_8
Wolfgang Bangerth [Tue, 3 Mar 2020 04:30:32 +0000 (05:30 +0100)]
Merge pull request #9557 from dangars/fix_equation_step_8

Fix elastic equation of step-8

4 years agoMerge pull request #9575 from tjhei/doc_tria_level_ghost
Wolfgang Bangerth [Tue, 3 Mar 2020 04:28:38 +0000 (05:28 +0100)]
Merge pull request #9575 from tjhei/doc_tria_level_ghost

documentation: improve level_ghost_owners

4 years agoMerge pull request #9595 from masterleinad/use_templated_utilities_invert_reverse_per...
Wolfgang Bangerth [Tue, 3 Mar 2020 04:26:43 +0000 (05:26 +0100)]
Merge pull request #9595 from masterleinad/use_templated_utilities_invert_reverse_permutation

Use a template for Utilities::reverse_permutation and Utilities::invert_permutation

4 years agoMerge pull request #9560 from gassmoeller/fix_polar_manifold
Wolfgang Bangerth [Tue, 3 Mar 2020 04:26:13 +0000 (05:26 +0100)]
Merge pull request #9560 from gassmoeller/fix_polar_manifold

Handle special case for PolarManifold::normal_vector

4 years agoConvert explicit loops over faces to range-based loops. 9603/head
Wolfgang Bangerth [Tue, 3 Mar 2020 00:21:47 +0000 (17:21 -0700)]
Convert explicit loops over faces to range-based loops.

4 years agoUpdate include/deal.II/base/utilities.h 9595/head
Daniel Arndt [Mon, 2 Mar 2020 20:18:43 +0000 (15:18 -0500)]
Update include/deal.II/base/utilities.h

Co-Authored-By: Martin Kronbichler <kronbichler@lnm.mw.tum.de>
4 years agoUse a template for Utilities::reverse_permutation and Utilities::invert_permutation
Daniel Arndt [Mon, 2 Mar 2020 19:55:24 +0000 (14:55 -0500)]
Use a template for Utilities::reverse_permutation and Utilities::invert_permutation

4 years agoMerge pull request #9591 from kronbichler/fix_64bit_warning
Martin Kronbichler [Mon, 2 Mar 2020 19:24:37 +0000 (20:24 +0100)]
Merge pull request #9591 from kronbichler/fix_64bit_warning

Fix two 64 bit warnings by converting to long long unsigned

4 years agoMerge pull request #9587 from bangerth/follow-up
Martin Kronbichler [Mon, 2 Mar 2020 19:23:55 +0000 (20:23 +0100)]
Merge pull request #9587 from bangerth/follow-up

Follow up to #9581

4 years agoFix documentation and indentation 9560/head
Rene Gassmoeller [Mon, 2 Mar 2020 16:38:57 +0000 (11:38 -0500)]
Fix documentation and indentation

4 years agoMerge pull request #9590 from kronbichler/fix_compile_64b
Timo Heister [Mon, 2 Mar 2020 18:47:24 +0000 (13:47 -0500)]
Merge pull request #9590 from kronbichler/fix_compile_64b

Eliminate two places with unsigned long long int

4 years agoAdd a changelog entry. 9587/head
Wolfgang Bangerth [Mon, 2 Mar 2020 03:48:51 +0000 (20:48 -0700)]
Add a changelog entry.

4 years agoUpdate the readme file.
Wolfgang Bangerth [Mon, 2 Mar 2020 03:48:42 +0000 (20:48 -0700)]
Update the readme file.

4 years agoCI: github action: test 64bit indices 9592/head
Timo Heister [Mon, 2 Mar 2020 14:50:57 +0000 (09:50 -0500)]
CI: github action: test 64bit indices

Test 64bit indices on the OSX github action.

4 years agoRemove duplicate code of invert_permutation 9590/head
Martin Kronbichler [Mon, 2 Mar 2020 13:31:42 +0000 (14:31 +0100)]
Remove duplicate code of invert_permutation

4 years agoEliminate two places with unsigned long long int
Martin Kronbichler [Mon, 2 Mar 2020 12:22:55 +0000 (13:22 +0100)]
Eliminate two places with unsigned long long int

4 years agoFix two 64 bit warnings by converting to long long unsigned 9591/head
Martin Kronbichler [Mon, 2 Mar 2020 14:12:05 +0000 (15:12 +0100)]
Fix two 64 bit warnings by converting to long long unsigned

4 years agoMerge pull request #9589 from kronbichler/fixup_geometry_info
Martin Kronbichler [Mon, 2 Mar 2020 14:11:21 +0000 (15:11 +0100)]
Merge pull request #9589 from kronbichler/fixup_geometry_info

Fix compile error of GeometryInfo::unit_tangential_vectors on clang-4/5

4 years agoFix compile error of GeometryInfo::unit_tangential_vectors on clang-4/5 9589/head
Martin Kronbichler [Mon, 2 Mar 2020 12:09:54 +0000 (13:09 +0100)]
Fix compile error of GeometryInfo::unit_tangential_vectors on clang-4/5

4 years agoMerge pull request #9574 from peterrum/anonymous_ca
Martin Kronbichler [Mon, 2 Mar 2020 11:37:13 +0000 (12:37 +0100)]
Merge pull request #9574 from peterrum/anonymous_ca

Add AnonymousConsensusAlgorithmProcess

4 years agoAdd AnonymousConsensusAlgorithmProcess 9574/head
Peter Munch [Fri, 28 Feb 2020 13:21:13 +0000 (14:21 +0100)]
Add AnonymousConsensusAlgorithmProcess

4 years agoMerge pull request #9581 from bangerth/uint64_t
Daniel Arndt [Mon, 2 Mar 2020 02:09:20 +0000 (21:09 -0500)]
Merge pull request #9581 from bangerth/uint64_t

Use uint64_t instead of 'unsigned long long int'.

4 years agoMerge pull request #9583 from tjhei/ci_remove_checkdoxygen
Timo Heister [Mon, 2 Mar 2020 01:57:06 +0000 (20:57 -0500)]
Merge pull request #9583 from tjhei/ci_remove_checkdoxygen

CI: remove check_doxygen as we do this in Travis

4 years agoCI: Jenkins: set -x and set -e 9584/head
Timo Heister [Sun, 1 Mar 2020 17:54:59 +0000 (12:54 -0500)]
CI: Jenkins: set -x and set -e

This is useful when browsing the build log to see the executed command

4 years agoCI: remove check_doxygen as we do this in Travis 9583/head
Timo Heister [Sun, 1 Mar 2020 17:50:06 +0000 (12:50 -0500)]
CI: remove check_doxygen as we do this in Travis

see #9582

4 years agoMerge pull request #9582 from masterleinad/improve_indentation_jenkinsfile
Timo Heister [Sun, 1 Mar 2020 17:48:36 +0000 (12:48 -0500)]
Merge pull request #9582 from masterleinad/improve_indentation_jenkinsfile

Improve indentation of Jenkinsfile

4 years agodocumentation: improve level_ghost_owners 9575/head
Timo Heister [Fri, 28 Feb 2020 13:51:39 +0000 (08:51 -0500)]
documentation: improve level_ghost_owners

4 years agoImprove indentation of Jenkinsfile 9582/head
Daniel Arndt [Sun, 1 Mar 2020 15:48:20 +0000 (10:48 -0500)]
Improve indentation of Jenkinsfile

4 years agoMerge pull request #9576 from peterrum/mglevelglobaltransfer_assert
Martin Kronbichler [Sun, 1 Mar 2020 10:28:40 +0000 (11:28 +0100)]
Merge pull request #9576 from peterrum/mglevelglobaltransfer_assert

Add assert to MGLevelGlobalTransfer

4 years agoAdd assert to MGLevelGlobalTransfer 9576/head
Peter Munch [Fri, 28 Feb 2020 17:46:15 +0000 (18:46 +0100)]
Add assert to MGLevelGlobalTransfer

4 years agoMerge pull request #9571 from tjhei/fgmres_doc
Wolfgang Bangerth [Sun, 1 Mar 2020 05:19:27 +0000 (06:19 +0100)]
Merge pull request #9571 from tjhei/fgmres_doc

amend FGMRES documentation

4 years agoUse uint64_t instead of 'unsigned long long int'. 9581/head
Wolfgang Bangerth [Sun, 1 Mar 2020 05:10:22 +0000 (22:10 -0700)]
Use uint64_t instead of 'unsigned long long int'.

4 years agoMerge pull request #9542 from tjhei/ci_run_checkdoxygen
David Wells [Sun, 1 Mar 2020 04:02:46 +0000 (23:02 -0500)]
Merge pull request #9542 from tjhei/ci_run_checkdoxygen

CI: run checkdoxygen.py for each PR

4 years agoCI: run checkdoxygen.py for each PR 9542/head
Timo Heister [Mon, 17 Feb 2020 19:15:34 +0000 (14:15 -0500)]
CI: run checkdoxygen.py for each PR

4 years agoMerge pull request #9541 from tjhei/check_doxygen_cleanup
David Wells [Sat, 29 Feb 2020 14:21:21 +0000 (09:21 -0500)]
Merge pull request #9541 from tjhei/check_doxygen_cleanup

checkdoxygen.py cleanup

4 years agoMerge pull request #9579 from kronbichler/unit_tangential_vectors
Martin Kronbichler [Sat, 29 Feb 2020 14:13:57 +0000 (15:13 +0100)]
Merge pull request #9579 from kronbichler/unit_tangential_vectors

Add GeometryInfo::unit_tangential_vectors

4 years agoChangelog 9579/head
Martin Kronbichler [Fri, 28 Feb 2020 18:27:44 +0000 (19:27 +0100)]
Changelog

4 years agoUse new tangential vectors
Martin Kronbichler [Fri, 28 Feb 2020 18:27:35 +0000 (19:27 +0100)]
Use new tangential vectors

4 years agoAdd test case
Martin Kronbichler [Fri, 28 Feb 2020 18:27:24 +0000 (19:27 +0100)]
Add test case


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