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https://gitweb.dealii.org/ - dealii.git/log
Martin Kronbichler [Mon, 27 Nov 2017 10:53:36 +0000 (11:53 +0100)]
Merge pull request #5535 from bangerth/grammar-issues
Use uniform grammar in function documentation.
Wolfgang Bangerth [Mon, 27 Nov 2017 04:50:45 +0000 (21:50 -0700)]
Use uniform grammar in function documentation.
Wolfgang Bangerth [Sun, 26 Nov 2017 23:19:33 +0000 (16:19 -0700)]
Merge pull request #5514 from niveshd/zoltanPartition
Mesh partitioning with zoltan instead of metis.
Wolfgang Bangerth [Sun, 26 Nov 2017 22:34:14 +0000 (15:34 -0700)]
Merge pull request #5528 from tamiko/generalized_interpolation_5
Allow non-interpolatory elements in FESystem for generalized supp.p.
Wolfgang Bangerth [Sun, 26 Nov 2017 22:31:13 +0000 (15:31 -0700)]
Merge pull request #5532 from masterleinad/fix_empty_lines
Fix empty lines in subdomain_ids_parallel_08 output
Daniel Arndt [Sun, 26 Nov 2017 22:16:43 +0000 (23:16 +0100)]
Fix empty lines in subdomain_ids_parallel_08 output
Nivesh Dommaraju [Sun, 26 Nov 2017 17:49:16 +0000 (11:49 -0600)]
add changelog entry
Nivesh Dommaraju [Sun, 26 Nov 2017 17:49:02 +0000 (11:49 -0600)]
add zoltan tests
Nivesh Dommaraju [Sun, 26 Nov 2017 17:47:53 +0000 (11:47 -0600)]
Add support for Zoltan graph partitioner
Zoltan is used for graph partitioning. The following page for zoltan's
guide has more information.
http://www.cs.sandia.gov/zoltan/ug_html/ug_alg_phg.html
Implementation:
- 4 query functions, as need by zoltan, are added in sparsity_tools.cc
- additional option has been added to "partition_triangulation"
function to choose between "metis" or "zoltan"
Nivesh Dommaraju [Sun, 26 Nov 2017 17:45:11 +0000 (11:45 -0600)]
CMake: Add check for Zoltan to trilinos configuration
Matthias Maier [Sat, 25 Nov 2017 18:39:21 +0000 (12:39 -0600)]
update documentation
Matthias Maier [Fri, 24 Nov 2017 17:36:59 +0000 (11:36 -0600)]
update test output
Matthias Maier [Fri, 24 Nov 2017 17:27:47 +0000 (11:27 -0600)]
add a new assert checking for non-interpolatory base elements
Matthias Maier [Fri, 24 Nov 2017 16:41:23 +0000 (10:41 -0600)]
remove duplicate asserts
Matthias Maier [Fri, 24 Nov 2017 16:26:07 +0000 (10:26 -0600)]
Bugfix: Allow non-interpolatory elements in FESystem for generalized s.p.
In case we encounter a non-interpolatory base element we now simply fill
the corresponding degrees of freedom with NaNs.
Wolfgang Bangerth [Sat, 25 Nov 2017 04:57:04 +0000 (21:57 -0700)]
Merge pull request #5526 from GivAlz/new_bbox_serialization
Adding serialize function to boundingbox class
Giovanni Alzetta [Fri, 24 Nov 2017 11:27:14 +0000 (12:27 +0100)]
Adding serialize function to boundingbox class and test
Matthias Maier [Fri, 24 Nov 2017 15:47:57 +0000 (09:47 -0600)]
Revert "Reinsert old function"
This reverts commit
711c6ea696376a5e5726cda0b31efe1a37b4e742 .
Jean-Paul Pelteret [Fri, 24 Nov 2017 13:04:58 +0000 (14:04 +0100)]
Merge pull request #5522 from masterleinad/fix_undefined_references_ad_intel
Avoid undefined references in AD::NumberTraits
Luca Heltai [Fri, 24 Nov 2017 11:51:26 +0000 (12:51 +0100)]
Merge pull request #5527 from masterleinad/fix_mpi_some_to_some_02
Fix base/mpi_some_to_some_02
Daniel Arndt [Fri, 24 Nov 2017 11:36:20 +0000 (12:36 +0100)]
Fix mpi_some_to_some_02
Daniel Arndt [Fri, 24 Nov 2017 10:35:54 +0000 (11:35 +0100)]
Merge pull request #5521 from masterleinad/restrict_metis_test
Change partitioner for mpi/subdomain_ids_parallel_08
Daniel Arndt [Thu, 23 Nov 2017 14:18:54 +0000 (15:18 +0100)]
Use different partitioner in mpi/mpi/subdomain_ids_parallel_08
Jean-Paul Pelteret [Fri, 24 Nov 2017 06:59:39 +0000 (07:59 +0100)]
Merge pull request #5491 from bangerth/complex-test
Change the boundary value type to match the vector type.
Denis Davydov [Fri, 24 Nov 2017 06:02:57 +0000 (07:02 +0100)]
Merge pull request #5524 from masterleinad/fix_communicate_active_fe_indices
Fix communicate_active_fe_indices again
Wolfgang Bangerth [Fri, 17 Nov 2017 16:46:39 +0000 (09:46 -0700)]
Add changelog.
Daniel Arndt [Thu, 23 Nov 2017 21:49:03 +0000 (22:49 +0100)]
Fix communicate_active_vertice_fe_indices again
Luca Heltai [Thu, 23 Nov 2017 16:25:26 +0000 (17:25 +0100)]
Merge pull request #5520 from bangerth/changelogs
Make changelogs look more uniform.
Luca Heltai [Thu, 23 Nov 2017 16:25:15 +0000 (17:25 +0100)]
Merge pull request #5519 from bangerth/doc-update
Minor doc updates.
Wolfgang Bangerth [Thu, 23 Nov 2017 14:08:39 +0000 (07:08 -0700)]
Minor doc updates.
Wolfgang Bangerth [Thu, 23 Nov 2017 13:59:33 +0000 (06:59 -0700)]
Make changelogs look more uniform.
Daniel Arndt [Thu, 23 Nov 2017 14:35:06 +0000 (15:35 +0100)]
Avoid undefined references in AD::NumberTraits
Luca Heltai [Thu, 23 Nov 2017 13:01:03 +0000 (14:01 +0100)]
Merge pull request #5511 from masterleinad/restrict_arpack_tests
Restrict ARPACK tests to UMFPACK support
Luca Heltai [Thu, 23 Nov 2017 12:59:17 +0000 (13:59 +0100)]
Merge pull request #5509 from luca-heltai/test-utilities
Added random_value and random_point to tests.h
Luca Heltai [Thu, 23 Nov 2017 08:01:16 +0000 (09:01 +0100)]
Be more pedantic with static_cast (now works also for std::complex).
Denis Davydov [Wed, 22 Nov 2017 22:11:05 +0000 (23:11 +0100)]
Merge pull request #5518 from masterleinad/fix_communicate_active_fe_indices
Fix sharedtria/communicate_active_fe_indices
Denis Davydov [Wed, 22 Nov 2017 22:09:17 +0000 (23:09 +0100)]
Merge pull request #5508 from jppelteret/ad-update_run_testsuite
Update script that runs the testsuite
Timo Heister [Wed, 22 Nov 2017 16:56:56 +0000 (11:56 -0500)]
Merge pull request #5516 from tjhei/tests_avoid_metis
Tests: avoid using metis in tests using shared tria
Timo Heister [Wed, 22 Nov 2017 19:22:30 +0000 (14:22 -0500)]
Tests: avoid using metis in tests using shared tria
This is because maintenance of 4 output files is a nightmare
Daniel Arndt [Wed, 22 Nov 2017 15:37:46 +0000 (16:37 +0100)]
Fix sharedtria/communicate_active_fe_indices
Luca Heltai [Wed, 22 Nov 2017 15:40:29 +0000 (16:40 +0100)]
Fixed Denis' comments.
Luca Heltai [Tue, 21 Nov 2017 11:34:55 +0000 (12:34 +0100)]
Added random_value and random_point to tests.h
Denis Davydov [Wed, 22 Nov 2017 14:47:39 +0000 (15:47 +0100)]
Merge pull request #5517 from jppelteret/ad-doxygen_settings
Update doxygen options to include Adol-C
Jean-Paul Pelteret [Wed, 22 Nov 2017 14:34:08 +0000 (15:34 +0100)]
Update doxygen options to include Adol-C
Jean-Paul Pelteret [Wed, 22 Nov 2017 13:12:45 +0000 (14:12 +0100)]
Merge pull request #5501 from masterleinad/bump_trilinos_version
Bump required Trilinos version to 12.4.2
Daniel Arndt [Sat, 18 Nov 2017 13:02:42 +0000 (14:02 +0100)]
Bump required Trilinos version to 12.4
Daniel Arndt [Tue, 21 Nov 2017 13:41:52 +0000 (14:41 +0100)]
Restrict ARPACK tests to UMFPACK support
Luca Heltai [Tue, 21 Nov 2017 08:22:35 +0000 (09:22 +0100)]
Merge pull request #5458 from GivAlz/new_guess_bbox
Added GridTools::guess_point_owner and test
Jean-Paul Pelteret [Tue, 21 Nov 2017 06:02:03 +0000 (07:02 +0100)]
Update script that runs the testsuite
Jean-Paul Pelteret [Tue, 21 Nov 2017 05:57:48 +0000 (06:57 +0100)]
Merge pull request #5482 from jppelteret/ad-sacado_product_type
Remove redundant specializations of scalar_product for Sacado numbers
Timo Heister [Mon, 20 Nov 2017 19:55:13 +0000 (14:55 -0500)]
Merge pull request #5436 from tcclevenger/distribute_dofs_shared
Change sharedtria dof distribution to match distributed tria
Daniel Arndt [Mon, 20 Nov 2017 17:45:28 +0000 (18:45 +0100)]
Merge pull request #5502 from luca-heltai/some-to-some-all-gather
New some_to_some and all_gather functions.
Daniel Arndt [Mon, 20 Nov 2017 17:25:28 +0000 (18:25 +0100)]
Merge pull request #5507 from kronbichler/fix_spherical_manifold_intermediate
Fix get_intermediate_point in spherical manifold for particular point
Giovanni Alzetta [Mon, 13 Nov 2017 12:26:00 +0000 (12:26 +0000)]
Added GridTools::guess_point_owner and test
Daniel Arndt [Mon, 20 Nov 2017 15:44:29 +0000 (16:44 +0100)]
Merge pull request #5493 from gassmoeller/fix_particle_handler_bug
Fix ghost particle bug
Luca Heltai [Mon, 20 Nov 2017 15:10:31 +0000 (16:10 +0100)]
Removed one output that requires MPILogInitAll in serial.
Luca Heltai [Mon, 20 Nov 2017 13:53:00 +0000 (14:53 +0100)]
Merge pull request #5468 from GivAlz/improve_computeptloc
Improving and fixing GridTools::compute_point_locations
Luca Heltai [Mon, 20 Nov 2017 13:36:40 +0000 (14:36 +0100)]
Added tests for serial, and one more complex test.
Martin Kronbichler [Mon, 20 Nov 2017 12:08:58 +0000 (13:08 +0100)]
Add test.
Martin Kronbichler [Mon, 20 Nov 2017 11:59:45 +0000 (12:59 +0100)]
Fix SphericalManifold::get_intermediate_point for particular point combination.
Daniel Arndt [Mon, 20 Nov 2017 11:10:26 +0000 (12:10 +0100)]
Merge pull request #5503 from cpraveen/convert-support-dof
Add convert_generalized_support_point_values_to_dof_values in FE_FaceQ and FE_TraceQ
Luca Heltai [Mon, 20 Nov 2017 09:37:30 +0000 (10:37 +0100)]
Fixed serial case.
Luca Heltai [Sun, 19 Nov 2017 23:14:15 +0000 (00:14 +0100)]
Addressed Denis' comments.
Daniel Arndt [Sun, 19 Nov 2017 20:23:36 +0000 (21:23 +0100)]
Merge pull request #5504 from kronbichler/fix_convergence_table
Fix convergence rates with 64 bit integer key column
Martin Kronbichler [Sun, 19 Nov 2017 14:55:11 +0000 (15:55 +0100)]
Changelog.
Martin Kronbichler [Sun, 19 Nov 2017 14:54:59 +0000 (15:54 +0100)]
Add test.
Martin Kronbichler [Sun, 19 Nov 2017 14:54:26 +0000 (15:54 +0100)]
Fix TableEntry for unsigned long long int.
Luca Heltai [Sun, 19 Nov 2017 11:25:50 +0000 (12:25 +0100)]
Renamed tests to be more descriptive.
Luca Heltai [Sat, 18 Nov 2017 20:49:54 +0000 (21:49 +0100)]
some_to_some and all_gather.
Praveen C [Sun, 19 Nov 2017 09:35:19 +0000 (15:05 +0530)]
Add entry in news
Praveen C [Sun, 19 Nov 2017 05:45:50 +0000 (11:15 +0530)]
Indent using astyle 2.04
Praveen C [Sun, 19 Nov 2017 05:01:00 +0000 (10:31 +0530)]
Fix indentation
Daniel Arndt [Sun, 19 Nov 2017 04:54:22 +0000 (05:54 +0100)]
Merge pull request #5500 from luca-heltai/pack_unpack
Utilities::pack and unpack
Praveen C [Sun, 19 Nov 2017 04:51:28 +0000 (10:21 +0530)]
Fix comment
Praveen C [Sun, 19 Nov 2017 04:44:46 +0000 (10:14 +0530)]
Add convert_generalized_support_point_values_to_dof_values
This function is missing for FE_FaceQ and FE_TraceQ which is now
implemented by copying from FE_DGQ.
See https://github.com/dealii/dealii/issues/5449
Luca Heltai [Sat, 18 Nov 2017 19:18:27 +0000 (20:18 +0100)]
Added support for tuple serialization in Utilities.
Luca Heltai [Sat, 18 Nov 2017 19:18:09 +0000 (20:18 +0100)]
Added pack/unpack to Utilities.
Daniel Arndt [Sat, 18 Nov 2017 10:44:56 +0000 (11:44 +0100)]
Merge pull request #5489 from o-sutton/fix_adaptation_bad_access
Fix EXC_BAD_ACCESS occurring when marking all elements for refinement or coarsening
Jean-Paul Pelteret [Fri, 17 Nov 2017 19:50:36 +0000 (20:50 +0100)]
Merge pull request #5495 from masterleinad/remove_unused_typedefs
Remove unused typedefs
Daniel Arndt [Fri, 17 Nov 2017 11:29:57 +0000 (12:29 +0100)]
Remove unused typedefs
Rene Gassmoeller [Fri, 17 Nov 2017 17:24:54 +0000 (10:24 -0700)]
Fix ghost particle bug
Oliver Sutton [Fri, 17 Nov 2017 17:02:19 +0000 (17:02 +0000)]
Add a test to ensure that refine_and_coarsen_fixed_number behaves as expected when either top_fraction or bottom_fraction are set to 1.0.
Wolfgang Bangerth [Fri, 17 Nov 2017 16:43:17 +0000 (09:43 -0700)]
Add test.
Wolfgang Bangerth [Fri, 17 Nov 2017 16:42:59 +0000 (09:42 -0700)]
Change the boundary value type to match the vector type.
Daniel Arndt [Fri, 17 Nov 2017 16:20:06 +0000 (17:20 +0100)]
Merge pull request #5488 from masterleinad/avoid_scoped_lock_warning
Avoid warning about unused ScopedLock for DEAL_II_WITH_THREADS=OFF
Oliver Sutton [Fri, 17 Nov 2017 15:52:24 +0000 (15:52 +0000)]
Add to minor news
o-sutton [Fri, 17 Nov 2017 15:39:46 +0000 (15:39 +0000)]
Update grid_refinement.cc
Fix indentation
Oliver Sutton [Fri, 17 Nov 2017 15:07:33 +0000 (15:07 +0000)]
Fix EXC_BAD_ACCESS occurring when marking all elements for refinement or coarsening using refine_and_coarsen_fixed_number.
Daniel Arndt [Fri, 17 Nov 2017 13:20:41 +0000 (14:20 +0100)]
Avoid warning about unused ScopedLock for DEAL_II_WITH_THREADS=OFF
Denis Davydov [Fri, 17 Nov 2017 12:20:04 +0000 (13:20 +0100)]
Merge pull request #5484 from davydden/bug/missing_instantiations_find_closest_vertex_of_cell
fix missing instantiation of find_closest_vertex_of_cell()
Jean-Paul Pelteret [Fri, 17 Nov 2017 12:10:47 +0000 (13:10 +0100)]
Merge pull request #5485 from masterleinad/fix_bounding_box_warning
Fix warning in base/bounding_box.cc
Daniel Arndt [Fri, 17 Nov 2017 09:47:34 +0000 (10:47 +0100)]
Fix warning in base/bounding_box.cc
Denis Davydov [Fri, 17 Nov 2017 09:34:23 +0000 (10:34 +0100)]
fix missing instantiation of find_closest_vertex_of_cell()
Daniel Arndt [Fri, 17 Nov 2017 09:33:49 +0000 (10:33 +0100)]
Merge pull request #5479 from masterleinad/array_view_2
Introduce ArrayView::data() and use where appropriate
Jean-Paul Pelteret [Fri, 17 Nov 2017 08:09:32 +0000 (09:09 +0100)]
Remove redundant specializations of scalar_product for Sacado numbers
Jean-Paul Pelteret [Fri, 17 Nov 2017 08:08:45 +0000 (09:08 +0100)]
Change the temporary type for a scalar_product function.
Denis Davydov [Fri, 17 Nov 2017 07:50:37 +0000 (08:50 +0100)]
Merge pull request #5481 from jppelteret/ad-changelogs_01
Add changelogs related to newly implemented AD number functionality.
Jean-Paul Pelteret [Fri, 17 Nov 2017 07:41:24 +0000 (08:41 +0100)]
Add changelogs related to newly implemented AD number functionality.
Daniel Arndt [Thu, 16 Nov 2017 23:35:45 +0000 (00:35 +0100)]
Changelog entry
Daniel Arndt [Thu, 16 Nov 2017 14:41:37 +0000 (15:41 +0100)]
Introduce ArrayView::data() and use where appropriate
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