]>
https://gitweb.dealii.org/ - dealii.git/log
Wolfgang Bangerth [Thu, 28 Jan 2016 13:35:27 +0000 (07:35 -0600)]
Adjust the output of two tests for 64-bit runs.
Martin Kronbichler [Thu, 28 Jan 2016 08:04:42 +0000 (09:04 +0100)]
Merge pull request #2119 from fsonner/sparsevankafix
Fix local second-order coupling in SparseVanka
Florian Sonner [Wed, 27 Jan 2016 14:56:48 +0000 (15:56 +0100)]
Add SparseVanka fix message to changes.h
Wolfgang Bangerth [Tue, 26 Jan 2016 17:17:48 +0000 (11:17 -0600)]
Merge pull request #2120 from tjhei/petsc_matrix_err_msg
improve PETSc sparse_matrix constructor error msg
Timo Heister [Tue, 26 Jan 2016 14:03:53 +0000 (15:03 +0100)]
improve PETSc sparse_matrix constructor error msg
If you construct a PETSc sparse matrix with invalid IndexSets for local
rows/columns, you only get a cryptic PETSc error code. This commit adds
a check in debug mode with a helpful error message.
Florian Sonner [Tue, 26 Jan 2016 13:37:20 +0000 (14:37 +0100)]
Fix local second-order coupling in SparseVanka
Fixes issue #2118.
Wolfgang Bangerth [Tue, 26 Jan 2016 11:50:17 +0000 (05:50 -0600)]
Merge pull request #2117 from tjhei/metis_small
fix METIS partitioning with too many processors
Timo Heister [Tue, 26 Jan 2016 09:54:25 +0000 (10:54 +0100)]
changelog
Timo Heister [Tue, 26 Jan 2016 09:51:57 +0000 (10:51 +0100)]
fix the case where we reduce to 1 domain
Timo Heister [Tue, 26 Jan 2016 09:51:38 +0000 (10:51 +0100)]
fix metis partitioning with too many processors
If you have more processors than cells to partition, METIS will behave
in a weird and undesired way:
- at some point all subdomains land on a single processor
- METIS produces an error message "***Cannot bisect a graph with 0
vertices!"
Timo Heister [Tue, 26 Jan 2016 08:29:54 +0000 (09:29 +0100)]
add test
Wolfgang Bangerth [Mon, 25 Jan 2016 15:13:30 +0000 (09:13 -0600)]
Merge pull request #2113 from bangerth/further-FEValues-cleanups-40
Remove internal update_once/update_each functions
Wolfgang Bangerth [Mon, 25 Jan 2016 15:12:55 +0000 (09:12 -0600)]
Fix copyright year range.
Wolfgang Bangerth [Sun, 24 Jan 2016 20:03:36 +0000 (14:03 -0600)]
Slightly clarify a comment.
Wolfgang Bangerth [Sun, 24 Jan 2016 19:16:33 +0000 (13:16 -0600)]
Remove declarations of functions that are no longer implemented.
Wolfgang Bangerth [Sun, 24 Jan 2016 01:23:34 +0000 (19:23 -0600)]
Remove an outdated comment.
Replace it with links to places where the comments are up to date.
Wolfgang Bangerth [Sun, 24 Jan 2016 01:23:07 +0000 (19:23 -0600)]
Remove now no longer used FE_PolyTensor::update_once/each.
Wolfgang Bangerth [Sun, 24 Jan 2016 01:22:45 +0000 (19:22 -0600)]
Remove now no longer used FE_Poly::update_once/each.
Wolfgang Bangerth [Sun, 24 Jan 2016 01:05:36 +0000 (19:05 -0600)]
Remove now no longer used FE_PolyFace::update_once/each.
Wolfgang Bangerth [Sun, 24 Jan 2016 00:54:54 +0000 (18:54 -0600)]
Remove now no longer used FE_FaceQ::update_once/each.
Wolfgang Bangerth [Sun, 24 Jan 2016 00:54:29 +0000 (18:54 -0600)]
Remove now no longer used FE_DGP_Nonparametric::update_once/each.
Bruno Turcksin [Mon, 25 Jan 2016 13:26:36 +0000 (08:26 -0500)]
Merge pull request #2115 from bangerth/fix-doxygen-markup
Fix doxygen markup.
Bruno Turcksin [Mon, 25 Jan 2016 13:26:03 +0000 (08:26 -0500)]
Merge pull request #2112 from bangerth/further-FEValues-cleanups-38
Initialize the last non-const field of FiniteElementData from constructor arguments
Wolfgang Bangerth [Mon, 25 Jan 2016 04:13:43 +0000 (22:13 -0600)]
Fix doxygen markup.
doxygen generates unpleasantly looking markup if the text that goes with a
'@name' tag is spread over two lines. Fix this.
Martin Kronbichler [Sun, 24 Jan 2016 21:15:37 +0000 (22:15 +0100)]
Merge pull request #2114 from bangerth/update-copyright-years
Update copyright year of all files touched in 2015.
Wolfgang Bangerth [Sun, 24 Jan 2016 21:03:16 +0000 (15:03 -0600)]
Update copyright year of all files touched in 2015.
Wolfgang Bangerth [Sun, 24 Jan 2016 19:33:38 +0000 (13:33 -0600)]
Merge pull request #2111 from tjhei/fix_step_40
fix crash in petsc step-40
Wolfgang Bangerth [Sat, 23 Jan 2016 18:24:25 +0000 (12:24 -0600)]
Initialize the last non-const field of FiniteElementData from constructor arguments.
Timo Heister [Sun, 24 Jan 2016 17:05:13 +0000 (18:05 +0100)]
fix crash in petsc step-40
fix:
An error occurred in line <96> of file </ssd/deal-
git/source/lac/petsc_solver.cc> in function
void dealii::PETScWrappers::SolverBase::solve(const
dealii::PETScWrappers::MatrixBase&, dealii::PETScWrappers::VectorBase&,
const dealii::PETScWrappers::VectorBase&, const
dealii::PETScWrappers::PreconditionerBase&)
The violated condition was:
ierr == 0
The name and call sequence of the exception was:
ExcPETScError(ierr)
Additional Information:
An error with error number 80 occurred while calling a PETSc function
Timo Heister [Sun, 24 Jan 2016 18:50:05 +0000 (19:50 +0100)]
Merge pull request #2106 from bangerth/further-FEValues-cleanups-37
Move some internal functions.
Bruno Turcksin [Sun, 24 Jan 2016 00:56:55 +0000 (19:56 -0500)]
Merge pull request #2110 from bangerth/remove-unnecessary-friend-declaration
Remove a friend declaration that is unnecessary.
Wolfgang Bangerth [Sun, 24 Jan 2016 00:53:00 +0000 (18:53 -0600)]
Remove a friend declaration that is unnecessary.
It also made no sense. Everything compiles just fine without it.
Bruno Turcksin [Sun, 24 Jan 2016 00:40:21 +0000 (19:40 -0500)]
Merge pull request #2109 from bangerth/further-FEValues-cleanups-39
Remove a comment that's no longer correct.
Wolfgang Bangerth [Sun, 24 Jan 2016 00:37:12 +0000 (18:37 -0600)]
Remove a comment that's no longer correct.
In fact, remove the entire section since there is a link to an extensive
documentation module just a couple of lines further down.
Matthias Maier [Sat, 23 Jan 2016 20:54:22 +0000 (14:54 -0600)]
Merge pull request #2108 from bangerth/fix-changelog
Sort changelog entries into the right categories.
David Wells [Sat, 23 Jan 2016 20:05:54 +0000 (15:05 -0500)]
Merge pull request #2093 from drwells/mesh-concept
Mesh concept
Wolfgang Bangerth [Sat, 23 Jan 2016 19:42:38 +0000 (13:42 -0600)]
Sort changelog entries into the right categories.
David Wells [Thu, 21 Jan 2016 04:42:46 +0000 (23:42 -0500)]
Merge GlossMeshAsAContainer and ConceptMeshType.
This moves the discussion completely into concepts.h.
David Wells [Sat, 23 Jan 2016 18:35:48 +0000 (13:35 -0500)]
Merge pull request #2107 from bangerth/fix-changelog
Fix grammar of an entry in the changelog.
David Wells [Wed, 20 Jan 2016 18:46:56 +0000 (13:46 -0500)]
Prefer 'MeshType' to 'Container' and 'GridClass'.
These things are already described as meshes in the documentation and there is
already a class named Mesh (buried in grid_reordering_internal.h), so the best
name for the concept is MeshType.
Wolfgang Bangerth [Sat, 23 Jan 2016 18:30:42 +0000 (12:30 -0600)]
Fix grammar of an entry in the changelog.
Wolfgang Bangerth [Sat, 23 Jan 2016 17:43:40 +0000 (11:43 -0600)]
Move some internal functions.
FESystem has a number of functions that are called in the member initializer list
of the constructors. These are all static functions, of course, and don't access
any member variables.
This patch moves them ouf of the class altogether. This has the advantage that
it reduces the size of the .h file, and that it reduces the number of functions
exported by the shared libraries. Rather, these functions may as well live
inside an anonymous namespace in the .cc file.
There are no functional changes, nor anything that would be visible to the user.
Wolfgang Bangerth [Sat, 23 Jan 2016 18:10:35 +0000 (12:10 -0600)]
Merge pull request #2103 from bangerth/further-FEValues-cleanups-36
Remove an unused argument of FiniteElementData.
Wolfgang Bangerth [Sat, 23 Jan 2016 16:43:59 +0000 (10:43 -0600)]
Remove an unused argument of FiniteElementData.
The value of this argument was unused by this class, but several derived
classes passed something down anyway. Fix this by simply removing the argument.
Wolfgang Bangerth [Sat, 23 Jan 2016 16:07:21 +0000 (10:07 -0600)]
Remove a default constructor that likely doesn't do very much good.
Martin Kronbichler [Sat, 23 Jan 2016 11:32:07 +0000 (12:32 +0100)]
Merge pull request #2102 from tjhei/fix_test
fix test codim_one/error_estimator_02
Timo Heister [Sat, 23 Jan 2016 10:56:27 +0000 (11:56 +0100)]
fix test codim_one/error_estimator_02
fixes dealii/tests/codim_one/error_estimator_02.cc:75:9: warning: using
integer absolute value function 'abs' when argument is of floating point
type [-Wabsolute-value]
if (abs(p(1)-1.0)<1e-5)
Wolfgang Bangerth [Sat, 23 Jan 2016 03:07:47 +0000 (21:07 -0600)]
Merge pull request #2097 from davydden/slepc_tests_no_iterations
do not print-out iteration counts for GHEP SLEPc unit tests
Wolfgang Bangerth [Sat, 23 Jan 2016 03:05:46 +0000 (21:05 -0600)]
Merge pull request #2092 from tjhei/kelly_codim_one
Kelly codim one
Denis Davydov [Thu, 21 Jan 2016 21:15:48 +0000 (22:15 +0100)]
do not print-out iteration counts for GHEP SLEPc unit tests
Timo Heister [Fri, 22 Jan 2016 03:10:02 +0000 (22:10 -0500)]
fix multithreading bug in test
Timo Heister [Fri, 22 Jan 2016 03:09:54 +0000 (22:09 -0500)]
add changelog
Timo Heister [Fri, 22 Jan 2016 03:01:00 +0000 (22:01 -0500)]
fix Neumann part of 1d Kelly estimator
Neumann conditions were evaluated at the wrong point. Also adjust test
(and print coordinates to prove that it is correct now).
Wolfgang Bangerth [Thu, 21 Jan 2016 22:58:08 +0000 (16:58 -0600)]
Merge pull request #2096 from tjhei/doxygen_remove_duplicate_functs
doxygen: do not export duplicate functions
Timo Heister [Thu, 21 Jan 2016 20:47:08 +0000 (15:47 -0500)]
doxygen: do not export duplicate functions
Since we started handing .cc files to doxygen, every explicit template
declaration of a function inside a .cc would generate another line for
that function in the class documentation (not clickable and before the
correct ones). We fix this by hiding undocumented functions. A quick
test shows, that even with this change, undocumented functions inside
classes defined in the .h will still be exported, because things like
@name groups and @ingroup count as "documentation".
Timo Heister [Thu, 21 Jan 2016 16:01:19 +0000 (11:01 -0500)]
fix 1d Kelly estimator
Timo Heister [Thu, 21 Jan 2016 16:01:10 +0000 (11:01 -0500)]
fix test
Bruno Turcksin [Thu, 21 Jan 2016 11:22:07 +0000 (06:22 -0500)]
Merge pull request #2094 from kronbichler/fix_test_runs
Only run tests if Trilinos is available.
Martin Kronbichler [Thu, 21 Jan 2016 07:59:07 +0000 (08:59 +0100)]
Only run tests if Trilinos is available.
Timo Heister [Wed, 20 Jan 2016 21:45:59 +0000 (16:45 -0500)]
Merge pull request #2091 from drwells/fix-documentation-verbatim-block
Fix documentation verbatim block
Timo Heister [Wed, 20 Jan 2016 21:35:40 +0000 (16:35 -0500)]
remove unused code
Timo Heister [Wed, 20 Jan 2016 21:28:32 +0000 (16:28 -0500)]
fix test formatting
Timo Heister [Wed, 20 Jan 2016 21:28:24 +0000 (16:28 -0500)]
rewrite normal vector computation
David Wells [Wed, 20 Jan 2016 20:50:58 +0000 (15:50 -0500)]
Improve formatting in a documentation example.
David Wells [Wed, 20 Jan 2016 20:45:26 +0000 (15:45 -0500)]
Prefer code to verbatim environments.
The pair '@code' and '@endcode' will instruct doxygen to perform syntax
highlighting while the verbatim environment does not.
Wolfgang Bangerth [Wed, 20 Jan 2016 19:22:42 +0000 (13:22 -0600)]
Merge pull request #2090 from drwells/dofhandlertype-doc
Fix some DoFHandlerType documentation.
Wolfgang Bangerth [Wed, 20 Jan 2016 19:16:01 +0000 (13:16 -0600)]
Merge pull request #2089 from drwells/update-comment-indentation-1
Update comment indentation 1
David Wells [Wed, 20 Jan 2016 18:52:23 +0000 (13:52 -0500)]
Fix some DoFHandlerType documentation.
David Wells [Wed, 20 Jan 2016 19:06:51 +0000 (14:06 -0500)]
Fill in the rest of a missing comment.
David Wells [Wed, 20 Jan 2016 18:50:58 +0000 (13:50 -0500)]
Reindent comments in the documentation: part 2.
Up until
801cfbfc1d deal.II used a style where comments would start at
about the 20th character for visibility. Some comments within the
documentation were not updated at the time.
Martin Kronbichler [Wed, 20 Jan 2016 18:50:52 +0000 (19:50 +0100)]
Merge pull request #2087 from kronbichler/master
Fix compiler warning
Timo Heister [Sat, 16 Jan 2016 23:46:28 +0000 (17:46 -0600)]
WIP kelly fix
Martin Kronbichler [Wed, 20 Jan 2016 16:55:19 +0000 (17:55 +0100)]
Fix compiler warning
Wolfgang Bangerth [Wed, 20 Jan 2016 15:58:05 +0000 (09:58 -0600)]
Merge pull request #2086 from tjhei/hyper_shell_followup
follow-up on hyper_shell documentation fixes
Timo Heister [Wed, 20 Jan 2016 15:37:03 +0000 (10:37 -0500)]
follow-up on hyper_shell documentation fixes
Timo Heister [Wed, 20 Jan 2016 15:24:19 +0000 (10:24 -0500)]
add failing test
Timo Heister [Wed, 20 Jan 2016 15:14:25 +0000 (10:14 -0500)]
Merge pull request #2085 from kronbichler/fix_msvc_compilation_02
Second attempt to fix MSVC on aligned vector
Martin Kronbichler [Wed, 20 Jan 2016 15:04:07 +0000 (16:04 +0100)]
Second attempt to fix MSVC on aligned vector
Martin Kronbichler [Wed, 20 Jan 2016 14:46:40 +0000 (15:46 +0100)]
Merge pull request #2084 from tjhei/hyper_shell_defaults
default cell numbers for hyper_shell in 3d
Martin Kronbichler [Wed, 20 Jan 2016 14:36:12 +0000 (15:36 +0100)]
Merge pull request #2052 from kronbichler/master
Matrix-free level transfer for geometric multigrid
Martin Kronbichler [Wed, 20 Jan 2016 14:31:25 +0000 (15:31 +0100)]
Add changelog entry
Timo Heister [Wed, 20 Jan 2016 14:32:58 +0000 (09:32 -0500)]
default cell numbers for hyper_shell in 3d
- a default of n_cells=0 will now choose 6 coarse cells in 3d (instead
of throwing an exception)
- improve documentation
Martin Kronbichler [Tue, 19 Jan 2016 21:40:13 +0000 (22:40 +0100)]
Small changes to due comments on code.
Martin Kronbichler [Tue, 19 Jan 2016 20:35:35 +0000 (21:35 +0100)]
Make tests a bit faster
Martin Kronbichler [Tue, 19 Jan 2016 19:04:30 +0000 (20:04 +0100)]
Use reproducible random numbers in tests
Martin Kronbichler [Mon, 11 Jan 2016 13:12:18 +0000 (14:12 +0100)]
Unit tests for matrix-free mg transfer
Martin Kronbichler [Mon, 11 Jan 2016 13:12:05 +0000 (14:12 +0100)]
Framework tests (complete multigrid solver)
Martin Kronbichler [Mon, 11 Jan 2016 13:11:50 +0000 (14:11 +0100)]
Test safety
Martin Kronbichler [Mon, 11 Jan 2016 13:11:26 +0000 (14:11 +0100)]
Implement matrix-free multigrid level transfer for FE_Q/FE_DGQ
Martin Kronbichler [Mon, 11 Jan 2016 11:42:47 +0000 (12:42 +0100)]
Add instantiation
Martin Kronbichler [Tue, 19 Jan 2016 19:05:18 +0000 (20:05 +0100)]
Merge pull request #2083 from tjhei/fix_multigrid_deadlock2
Fix multigrid deadlock part 2
David Wells [Tue, 19 Jan 2016 18:45:20 +0000 (13:45 -0500)]
Merge pull request #2082 from ESeNonFossiIo/small_error
swap Range Domain in null_operator
Timo Heister [Tue, 19 Jan 2016 18:00:29 +0000 (13:00 -0500)]
fix marking of MG cells
Timo Heister [Tue, 19 Jan 2016 18:00:08 +0000 (13:00 -0500)]
fix warning
ESeNonFossiIo [Tue, 19 Jan 2016 16:01:11 +0000 (17:01 +0100)]
swap
Wolfgang Bangerth [Tue, 19 Jan 2016 13:44:35 +0000 (07:44 -0600)]
Merge pull request #2080 from kronbichler/fix_msvc_compilation
Fix compilation with MSVC
Martin Kronbichler [Tue, 19 Jan 2016 13:31:07 +0000 (14:31 +0100)]
Fix compilation with MSVC
Martin Kronbichler [Tue, 19 Jan 2016 10:53:27 +0000 (11:53 +0100)]
Merge pull request #2079 from tjhei/mg_par_deadlock
Parallel Multigrid deadlock
Timo Heister [Tue, 19 Jan 2016 03:27:23 +0000 (22:27 -0500)]
setup missing parallel level neighbors
Level ghosts were not set up if neighbor is finer and we have no cells
on that finest level. This causes a situation where
Triangulation::level_ghost_owners is not symmetric causing a deadlock
(and maybe also wrong information down the line). This causes a few test
output changes...
Timo Heister [Tue, 19 Jan 2016 03:14:25 +0000 (22:14 -0500)]
add comments and checks
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