]>
https://gitweb.dealii.org/ - dealii.git/log
Wolfgang Bangerth [Fri, 24 Jul 2015 15:58:25 +0000 (10:58 -0500)]
Add a changelog entry.
Conflicts:
doc/news/changes.h
Wolfgang Bangerth [Thu, 23 Jul 2015 16:00:51 +0000 (11:00 -0500)]
Make sure that compute refinement thresholds are no larger than the max indicator.
This could happen because we search the threshold in an interval larger than the
actual indicators. If we end up with a threshold that is larger than the largest
indicator, we need to cut things back.
In the process of debugging, I also found a few oddities that have to do
with the fact that we do a lot of arithmetic in double precision, but often
pass in criteria as vectors of float. Fix some of those as well.
Matthias Maier [Fri, 24 Jul 2015 13:55:16 +0000 (08:55 -0500)]
Merge pull request #1187 from tjhei/r83_pr1179
[8.3] take over #1179: Fix cmake configure issue introduced by #1148
Matthias Maier [Fri, 24 Jul 2015 13:55:04 +0000 (08:55 -0500)]
Merge pull request #1186 from tjhei/r83_pr1176
[8.3] take over #1176 fix invalid operation in DynamicSparsityPattern::iterator
Timo Heister [Thu, 23 Jul 2015 13:27:41 +0000 (09:27 -0400)]
Fix cmake configure issue introduced by #1148
add missing RESET_CMAKE_REQUIRED() introduced by #1148 and commit
e02e450 .
Timo Heister [Wed, 22 Jul 2015 19:42:31 +0000 (15:42 -0400)]
fix invalid operation in DynamicSparsityPattern::iterator
We used to compare two std::vector iterators that might belong to
different std::vectors. This is obviously illegal.
This addresses issue #1175, see
https://github.com/dealii/dealii/issues/1175
Add a test that failed (with stl debug library only).
Conflicts:
doc/news/changes.h
Wolfgang Bangerth [Tue, 21 Jul 2015 12:54:12 +0000 (14:54 +0200)]
Merge pull request #1170 from tjhei/r83_authors
[8.3] add forgotten AUTHORS file for release
Timo Heister [Tue, 21 Jul 2015 12:34:54 +0000 (08:34 -0400)]
add forgotten AUTHORS file for release
Matthias Maier [Sat, 18 Jul 2015 18:04:23 +0000 (13:04 -0500)]
Merge pull request #1161 from tjhei/r83_pr1148
[8.3] take over #1148: Workaround: fix compilation with icc and linear_operator
Matthias Maier [Sat, 18 Jul 2015 18:04:07 +0000 (13:04 -0500)]
Merge pull request #1160 from tjhei/r83_pr1157
[8.3] take over #1157: Update tests for Intel 15
Matthias Maier [Sat, 18 Jul 2015 18:03:57 +0000 (13:03 -0500)]
Merge pull request #1159 from tjhei/r83_pr1158
[8.3] take over #1158: Avoid Intel 15 bug in SymmetricTensor
Matthias Maier [Fri, 17 Jul 2015 19:33:45 +0000 (14:33 -0500)]
silence test
Matthias Maier [Thu, 16 Jul 2015 18:12:12 +0000 (13:12 -0500)]
Workaround: fix compilation with icc and linear_operator
Disables the sfinae lookup in the has_vmult_add helper class for faulty
icc. Intel's compiler up version 15.0.3 run into an sfinae bug otherwise.
For affected compiler versions, has_vmult_add will always report "false"
for icc which will result in a slight performance penalty due to
unnecessary temporary storage.
Timo Heister [Sat, 18 Jul 2015 16:22:01 +0000 (12:22 -0400)]
Update tests for Intel 15
Make error checks more reliable and void == with doubles.
Timo Heister [Sat, 18 Jul 2015 16:24:04 +0000 (12:24 -0400)]
Avoid Intel 15 bug in SymmetricTensor
This should fix broken behavior in deal.II/fe_values_view_{23|24|25} with
Intel 15.0.3, where the compiler sometimes forgets to initialize the static
fields.
Wolfgang Bangerth [Fri, 17 Jul 2015 12:25:27 +0000 (14:25 +0200)]
Merge pull request #1149 from tjhei/r83_pr1147
[8.3] take over #1147: Bugfix: Do not test for inclusion of config.h in header tests
Matthias Maier [Thu, 16 Jul 2015 13:47:27 +0000 (08:47 -0500)]
Bugfix: Do not test for inclusion of config.h in header tests
It turns out that sometimes [1] the testsuite picks up revision.h (and
config.h) as well.
revision.h does not include config.h and the test subsequently fails with
the DEAL_II_NAMESPACE_* not being found. Disable this check for the
revision.h test.
[1] For an in-source build and if an installed deal.II is tested.
Timo Heister [Thu, 16 Jul 2015 13:00:41 +0000 (09:00 -0400)]
update VERSION for release
Wolfgang Bangerth [Wed, 15 Jul 2015 20:55:18 +0000 (22:55 +0200)]
Merge pull request #1143 from tamiko/remove_blocklinearoperator
[8.3] Remove unfinished BlockLinearOperator class and tests
Matthias Maier [Wed, 15 Jul 2015 20:45:43 +0000 (15:45 -0500)]
Documentation: Remove BlockLinearOperator from the glossary
Wolfgang Bangerth [Wed, 15 Jul 2015 19:00:49 +0000 (21:00 +0200)]
Merge pull request #1145 from tjhei/r83_pr1144
[8.3] take over #1144: Fix name of this file to match our convention
Wolfgang Bangerth [Wed, 15 Jul 2015 17:26:06 +0000 (12:26 -0500)]
Fix name of this file to match our convention (and the HTML links we
use everywhere).
Matthias Maier [Wed, 15 Jul 2015 17:03:29 +0000 (12:03 -0500)]
Remove unfinished BlockLinearOperator class and tests
Matthias Maier [Wed, 15 Jul 2015 15:52:06 +0000 (10:52 -0500)]
Merge pull request #1142 from tjhei/r83_pr1141
[8.3] take over #1141: fix references in testsuite.html
Timo Heister [Wed, 15 Jul 2015 14:47:13 +0000 (10:47 -0400)]
fix references in testsuite.html
Wolfgang Bangerth [Wed, 15 Jul 2015 14:52:13 +0000 (16:52 +0200)]
Merge pull request #1140 from tjhei/r83_pr1135
[8.3] take over #1135: disable cxx11 on clang with libc++ if buggy
Timo Heister [Tue, 14 Jul 2015 18:37:31 +0000 (14:37 -0400)]
disable cxx11 on clang with libc++ if buggy
Wolfgang Bangerth [Tue, 14 Jul 2015 23:05:24 +0000 (01:05 +0200)]
Merge pull request #1137 from tjhei/r83_remove_steps
[8.3] removed unfinished steps (release tasks step 8)
Timo Heister [Tue, 14 Jul 2015 20:38:29 +0000 (16:38 -0400)]
removed unfinished steps (release tasks step 8).
Timo Heister [Tue, 14 Jul 2015 20:31:43 +0000 (16:31 -0400)]
update AUTHORS
Timo Heister [Tue, 14 Jul 2015 20:17:36 +0000 (16:17 -0400)]
update VERSION
Timo Heister [Tue, 14 Jul 2015 20:16:45 +0000 (16:16 -0400)]
update changes and news for release
Bruno Turcksin [Tue, 14 Jul 2015 19:44:27 +0000 (14:44 -0500)]
Merge pull request #1136 from tjhei/intel_vec
enable auto-vectorization for intel 15
Timo Heister [Tue, 14 Jul 2015 19:37:27 +0000 (15:37 -0400)]
enable auto-vectorization for intel 15
It turns out vectorization is working again (at least with 15.0.3), so
enable it conditionally.
Matthias Maier [Tue, 14 Jul 2015 13:19:37 +0000 (08:19 -0500)]
Merge pull request #1130 from bangerth/remove-unnecessary-data-element
Remove storing data we end up not using.
Matthias Maier [Tue, 14 Jul 2015 13:18:42 +0000 (08:18 -0500)]
Merge pull request #1133 from tjhei/cmake_fixes
configuration fixes
Timo Heister [Tue, 14 Jul 2015 13:12:10 +0000 (09:12 -0400)]
set template depth on MAC OS
Timo Heister [Tue, 14 Jul 2015 13:11:53 +0000 (09:11 -0400)]
disable cxx14 if cxx11 fails
Finally disable cxx14 if cxx11 detection failed for whatever reason.
Before we could end up in a situation with CXX14=TRUE and CXX11=FALSE
even if nothing was specified during configure time. Running cmake a
second time would then bail out.
Timo Heister [Tue, 14 Jul 2015 12:41:22 +0000 (08:41 -0400)]
Merge pull request #1090 from masterleinad/branch_fix_rotated_periodicity
Arbitrary orientations in parallel::distributed::Triangulation::add_periodicity
Wolfgang Bangerth [Tue, 14 Jul 2015 07:38:33 +0000 (09:38 +0200)]
Merge pull request #1132 from kronbichler/master
Update documentation
Martin Kronbichler [Tue, 14 Jul 2015 06:35:33 +0000 (08:35 +0200)]
Update documentation
Daniel Arndt [Mon, 6 Jul 2015 17:41:56 +0000 (19:41 +0200)]
Add tests for periodicity constraints in parallel
Wolfgang Bangerth [Mon, 13 Jul 2015 21:07:29 +0000 (16:07 -0500)]
Remove storing data we end up not using.
We passed a data element around and stored it in a local class, but
ended up not using it after all. This is likely a leftover from a
previous iteration in the code. In any case, removing the member
variable turns out to compile and test fine, so we don't need to
pass this data to the constructor either.
Daniel Arndt [Mon, 6 Jul 2015 17:39:28 +0000 (19:39 +0200)]
Allow for arbitrary orientations of faces for periodicity constraints in parallel
Daniel Arndt [Mon, 6 Jul 2015 09:18:34 +0000 (11:18 +0200)]
Fix smaller errors for rotated periodicity constraints and allow for constraints on the same DoF in this case
Wolfgang Bangerth [Mon, 13 Jul 2015 16:02:40 +0000 (12:02 -0400)]
Merge pull request #1127 from tjhei/release_step_0
Release step 0
Wolfgang Bangerth [Mon, 13 Jul 2015 15:41:53 +0000 (11:41 -0400)]
Merge pull request #1123 from tjhei/test_multipleselection
test ParameterHandler::MultipleSelection
Timo Heister [Mon, 13 Jul 2015 13:07:35 +0000 (09:07 -0400)]
update Trilinos docs
Timo Heister [Sun, 12 Jul 2015 22:40:34 +0000 (18:40 -0400)]
./contrib/utilities/update-copyright
Timo Heister [Sun, 12 Jul 2015 22:37:47 +0000 (18:37 -0400)]
bump PETSc version in doc
Matthias Maier [Sun, 12 Jul 2015 21:52:47 +0000 (23:52 +0200)]
Merge pull request #1125 from tjhei/cmake_cxx14_variable
set cxx14 cmake variable correctly
Matthias Maier [Sun, 12 Jul 2015 21:51:57 +0000 (23:51 +0200)]
Merge pull request #1126 from tjhei/mingw_warnings
boost variadic template warnings
Timo Heister [Sun, 12 Jul 2015 21:42:02 +0000 (17:42 -0400)]
avoid compiler warnings on windows
Timo Heister [Sun, 12 Jul 2015 21:40:00 +0000 (17:40 -0400)]
BOOST no cxx11 warnings
Stop BOOST from trying to use variadic templates when we compile without cxx11
support. This only happens rarely (at least with mingw gcc 5 on windows).
Timo Heister [Sun, 12 Jul 2015 21:33:09 +0000 (17:33 -0400)]
set cxx14 cmake variable correctly
The with_cxx14 flag was incorrectly set as a variable instead of settings the
cached variable. This would cause some weirdness (cached and non-cached
variables of the same name coexist). Before this patch, "DEAL_II_WITH_CXX14 =
OFF" would be printed twice in the feature section.
Timo Heister [Sat, 11 Jul 2015 23:04:39 +0000 (19:04 -0400)]
changelog
Timo Heister [Sat, 11 Jul 2015 23:02:02 +0000 (19:02 -0400)]
fix handling of whitespace in ParameterHandler
No longer remove multiple spaces inside the 'set' expression, but only
at the beginning and end of the lines and before after '='.
Timo Heister [Sat, 11 Jul 2015 22:44:17 +0000 (18:44 -0400)]
add Utilities::trim()
Timo Heister [Sat, 11 Jul 2015 21:57:02 +0000 (17:57 -0400)]
improve documentation
Timo Heister [Sat, 11 Jul 2015 21:40:28 +0000 (17:40 -0400)]
test ParameterHandler::MultipleSelection
Martin Kronbichler [Sun, 12 Jul 2015 10:21:30 +0000 (12:21 +0200)]
Merge pull request #1124 from bangerth/fix-comment
Update a comment.
Wolfgang Bangerth [Sun, 12 Jul 2015 10:15:50 +0000 (05:15 -0500)]
Update a comment.
Reformatting has destroyed the formatting of this comment and made it
difficult to see what it actually was supposed to mean. That said, I'm
also not entirely clear what exactly the TODO referred to to begin with,
so remove it.
Martin Kronbichler [Sat, 11 Jul 2015 18:42:04 +0000 (20:42 +0200)]
Merge pull request #1121 from simonsticko/EigSortingGMRES
Add sorting to eigenvalues in SolverGMRES
Simon Sticko [Sat, 11 Jul 2015 18:21:54 +0000 (20:21 +0200)]
Add sorting to eigenvalues in SolverGMRES
The eigenvalues output through the eigenvalues signals was not sorted
previously. Add sorting according to
internal::SolverGMRES::complex_less_pred.
Martin Kronbichler [Sat, 11 Jul 2015 17:00:27 +0000 (19:00 +0200)]
Merge pull request #1118 from kronbichler/master
Simplify Chebyshev preconditioner setup by using signals
Martin Kronbichler [Sat, 11 Jul 2015 09:59:15 +0000 (11:59 +0200)]
Simplify Chebyshev preconditioner setup by using signals
Wolfgang Bangerth [Sat, 11 Jul 2015 15:26:59 +0000 (11:26 -0400)]
Merge pull request #1112 from drwells/fix-code-intercalation
Fix code intercalation
Guido Kanschat [Sat, 11 Jul 2015 15:05:46 +0000 (17:05 +0200)]
Merge pull request #1120 from drwells/update-include-guards-2
Update two more nonstandard include guards.
David Wells [Sat, 11 Jul 2015 12:42:46 +0000 (08:42 -0400)]
Update two more nonstandard include guards.
David Wells [Sat, 4 Jul 2015 12:27:51 +0000 (08:27 -0400)]
Fix comments on a code sample.
The comments and code were intercalated in an incorrect manner, where
some comments were uncommented and some code was (incorrectly)
commented. I also fixed a small error in the example code (the dof
handler was not associated a triangulation).
Wolfgang Bangerth [Sat, 11 Jul 2015 10:54:20 +0000 (06:54 -0400)]
Merge pull request #1093 from davydden/MPI_sum_Vector
Utilities::MPI::sum() for Vector<number>
Martin Kronbichler [Sat, 11 Jul 2015 08:52:08 +0000 (10:52 +0200)]
Merge pull request #1111 from bangerth/move-IsBlockMatrix
Move IsBlockMatrix from block_indices.h to constraint_matrix.h.
Martin Kronbichler [Sat, 11 Jul 2015 08:50:44 +0000 (10:50 +0200)]
Merge pull request #1116 from drwells/fix-code-quote-line-split
Correctly format a code quote.
Martin Kronbichler [Sat, 11 Jul 2015 08:50:03 +0000 (10:50 +0200)]
Merge pull request #1115 from drwells/use-tt-not-TT
Consistently use '<tt>', not '<TT>', so show code.
Martin Kronbichler [Sat, 11 Jul 2015 08:48:56 +0000 (10:48 +0200)]
Merge pull request #1114 from drwells/update-include-guards
Update header guard symbols to the new style.
Martin Kronbichler [Sat, 11 Jul 2015 08:47:56 +0000 (10:47 +0200)]
Merge pull request #1113 from drwells/fix-small-typos
Fix some small typos.
Martin Kronbichler [Sat, 11 Jul 2015 08:41:30 +0000 (10:41 +0200)]
Merge pull request #703 from simonsticko/signalsSolverCG
Add signals for retrieving additional data from solver_cg
David Wells [Sat, 4 Jul 2015 12:34:23 +0000 (08:34 -0400)]
Correctly format a code quote.
David Wells [Sat, 4 Jul 2015 12:30:27 +0000 (08:30 -0400)]
Consistently use '<tt>', not '<TT>', so show code.
David Wells [Sat, 4 Jul 2015 12:29:54 +0000 (08:29 -0400)]
Update header guard symbols to the new style.
David Wells [Mon, 29 Jun 2015 01:21:05 +0000 (21:21 -0400)]
Fix some small typos.
Wolfgang Bangerth [Fri, 10 Jul 2015 22:28:06 +0000 (17:28 -0500)]
Move IsBlockMatrix from block_indices.h to constraint_matrix.h.
The latter is the only file where it is actually used, so we may as well have it there.
Wolfgang Bangerth [Fri, 10 Jul 2015 21:37:33 +0000 (17:37 -0400)]
Merge pull request #1101 from tjhei/fix_tests
cleanup test
Wolfgang Bangerth [Fri, 10 Jul 2015 21:36:50 +0000 (17:36 -0400)]
Merge pull request #1110 from kronbichler/master
One more fix for gcc-4.4
Timo Heister [Thu, 9 Jul 2015 20:00:59 +0000 (16:00 -0400)]
cleanup test
- correct push/pop
- don't use \n
- format output
- maybe fix mac os by using more long double?
Timo Heister [Fri, 10 Jul 2015 19:59:29 +0000 (15:59 -0400)]
Merge pull request #1108 from bangerth/fix-test-7
Adjust the precision of the output of a test.
Simon Sticko [Sun, 29 Mar 2015 11:25:18 +0000 (13:25 +0200)]
Add signals for retrieving additional data from solver_cg and solver_gmres.
SolverCG and SolverGMRES compute quantities such as eigenvalues, condition numbers
and coefficients during the solution process. Add boost::signals2 to be able to
communicate these estimates back to the caller.
Martin Kronbichler [Fri, 10 Jul 2015 19:43:15 +0000 (21:43 +0200)]
One more fix for gcc-4.4
Timo Heister [Fri, 10 Jul 2015 18:50:29 +0000 (14:50 -0400)]
Merge pull request #1102 from bangerth/cpp11-and-laoperators
Add references between C++11 and the LA Operators.
Wolfgang Bangerth [Fri, 10 Jul 2015 18:49:37 +0000 (14:49 -0400)]
Merge pull request #1109 from tjhei/speed_up_test
simplify test
Timo Heister [Fri, 10 Jul 2015 18:47:22 +0000 (14:47 -0400)]
simplify test
This avoid timeouts on the tester by speeding up the computation by a
factor of about 4.
Wolfgang Bangerth [Fri, 10 Jul 2015 18:34:13 +0000 (13:34 -0500)]
Adjust the precision of the output of a test.
Wolfgang Bangerth [Fri, 10 Jul 2015 17:58:58 +0000 (13:58 -0400)]
Merge pull request #1092 from guidokanschat/block_indices_string
Block indices string
Timo Heister [Fri, 10 Jul 2015 17:20:23 +0000 (13:20 -0400)]
Merge pull request #1107 from kronbichler/master
Make compile gcc-4.4
Martin Kronbichler [Fri, 10 Jul 2015 16:59:15 +0000 (18:59 +0200)]
Make compile gcc-4.4
Guido Kanschat [Wed, 8 Jul 2015 07:59:04 +0000 (09:59 +0200)]
add string conversion for BlockIndices
Timo Heister [Fri, 10 Jul 2015 16:07:54 +0000 (12:07 -0400)]
Merge pull request #1105 from drwells/fix-step-32-references
Fix some minor doxygen issues in step-32.
Wolfgang Bangerth [Fri, 10 Jul 2015 16:07:05 +0000 (10:07 -0600)]
Merge pull request #1106 from tjhei/fix_tests2
fix tests
Timo Heister [Fri, 10 Jul 2015 16:06:07 +0000 (12:06 -0400)]
fix tests
- 2 tests require functionparser
- update another libc++ typename string replacement
David Wells [Fri, 10 Jul 2015 14:19:19 +0000 (10:19 -0400)]
Fix some minor doxygen issues in step-32.
Doxygen did not pick up the quoted text next to a @ref correctly, so I
reworded the paragraph to not need the quoted text.
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