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https://gitweb.dealii.org/ - dealii-svn.git/log
denis.davydov [Thu, 15 May 2014 14:12:35 +0000 (14:12 +0000)]
another attempt on renumbering following advice by Timo
git-svn-id: https://svn.dealii.org/branches/branch_sharedtria@32902
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denis.davydov [Sun, 4 May 2014 17:35:16 +0000 (17:35 +0000)]
revert previous commit; add Assert to ParallelShared::renumber_dofs
git-svn-id: https://svn.dealii.org/branches/branch_sharedtria@32882
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denis.davydov [Sun, 4 May 2014 12:46:23 +0000 (12:46 +0000)]
started adding some processing of new_numbers in ParallelShared::renumber_dofs...
git-svn-id: https://svn.dealii.org/branches/branch_sharedtria@32881
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heister [Fri, 2 May 2014 14:31:24 +0000 (14:31 +0000)]
update test output
git-svn-id: https://svn.dealii.org/branches/branch_sharedtria@32876
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heister [Fri, 2 May 2014 14:20:50 +0000 (14:20 +0000)]
make it compile with clang
git-svn-id: https://svn.dealii.org/branches/branch_sharedtria@32875
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denis.davydov [Fri, 2 May 2014 12:16:43 +0000 (12:16 +0000)]
call update_number_cache () for shared tria when appropriate
git-svn-id: https://svn.dealii.org/branches/branch_sharedtria@32874
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denis.davydov [Fri, 2 May 2014 11:24:23 +0000 (11:24 +0000)]
reworked DoFTools::locally_owned_dofs_with_subdomain again; Sum of locally owned now equals n_dofs()
git-svn-id: https://svn.dealii.org/branches/branch_sharedtria@32873
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denis.davydov [Fri, 2 May 2014 09:40:49 +0000 (09:40 +0000)]
reworked DoFTools::locally_owned_dofs_with_subdomain; use updated version in policy
git-svn-id: https://svn.dealii.org/branches/branch_sharedtria@32872
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denis.davydov [Fri, 2 May 2014 08:33:59 +0000 (08:33 +0000)]
added MeshSmoothing to constructor; Verbatim copy of NumberCache related functions from distributed triangulation
git-svn-id: https://svn.dealii.org/branches/branch_sharedtria@32871
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heister [Tue, 29 Apr 2014 22:59:43 +0000 (22:59 +0000)]
test sharedtria: renumbering
git-svn-id: https://svn.dealii.org/branches/branch_sharedtria@32861
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heister [Tue, 29 Apr 2014 22:47:05 +0000 (22:47 +0000)]
fix test output
git-svn-id: https://svn.dealii.org/branches/branch_sharedtria@32860
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heister [Tue, 29 Apr 2014 22:36:03 +0000 (22:36 +0000)]
test number_cache for shared_tria
git-svn-id: https://svn.dealii.org/branches/branch_sharedtria@32859
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denis.davydov [Sun, 27 Apr 2014 15:41:40 +0000 (15:41 +0000)]
made distribute_dofs() return NumberCache as it was originally
git-svn-id: https://svn.dealii.org/branches/branch_sharedtria@32848
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denis.davydov [Sat, 26 Apr 2014 21:41:52 +0000 (21:41 +0000)]
another attempt to fix the bug
git-svn-id: https://svn.dealii.org/branches/branch_sharedtria@32847
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denis.davydov [Sat, 26 Apr 2014 20:32:42 +0000 (20:32 +0000)]
Hopefully fixed a bug introduced in 32694
git-svn-id: https://svn.dealii.org/branches/branch_sharedtria@32846
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heister [Fri, 25 Apr 2014 21:37:09 +0000 (21:37 +0000)]
leave a todo
git-svn-id: https://svn.dealii.org/branches/branch_sharedtria@32838
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heister [Fri, 25 Apr 2014 21:36:42 +0000 (21:36 +0000)]
new step-18 using shared_tria
git-svn-id: https://svn.dealii.org/branches/branch_sharedtria@32837
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heister [Fri, 25 Apr 2014 21:19:18 +0000 (21:19 +0000)]
test: output subdomain id
git-svn-id: https://svn.dealii.org/branches/branch_sharedtria@32836
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heister [Fri, 25 Apr 2014 21:14:39 +0000 (21:14 +0000)]
update test with new header, works now
git-svn-id: https://svn.dealii.org/branches/branch_sharedtria@32835
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heister [Fri, 25 Apr 2014 21:14:12 +0000 (21:14 +0000)]
move shared_tria into separate files
git-svn-id: https://svn.dealii.org/branches/branch_sharedtria@32834
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heister [Fri, 25 Apr 2014 20:48:17 +0000 (20:48 +0000)]
correct test output
git-svn-id: https://svn.dealii.org/branches/branch_sharedtria@32833
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heister [Fri, 25 Apr 2014 20:47:39 +0000 (20:47 +0000)]
add test
git-svn-id: https://svn.dealii.org/branches/branch_sharedtria@32832
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heister [Fri, 25 Apr 2014 20:47:10 +0000 (20:47 +0000)]
add new test directory
git-svn-id: https://svn.dealii.org/branches/branch_sharedtria@32831
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heister [Tue, 22 Apr 2014 15:01:57 +0000 (15:01 +0000)]
merge from mainline
git-svn-id: https://svn.dealii.org/branches/branch_sharedtria@32807
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maier [Tue, 22 Apr 2014 14:22:41 +0000 (14:22 +0000)]
CMake: Bugfixes:
Use DEAL_II_CXX_FLAGS for the top level library target
Set the linker language to cxx
git-svn-id: https://svn.dealii.org/trunk@32805
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heister [Tue, 22 Apr 2014 13:46:53 +0000 (13:46 +0000)]
revert r32801 because we suppress boost version information now
git-svn-id: https://svn.dealii.org/trunk@32804
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heister [Tue, 22 Apr 2014 13:46:37 +0000 (13:46 +0000)]
make serialization tests independent of boost.serialize version number by writing them with 'no_header'
git-svn-id: https://svn.dealii.org/trunk@32803
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maier [Tue, 22 Apr 2014 10:31:02 +0000 (10:31 +0000)]
Testsuite: Invert order of files to diff so that the output shows the changes with respect to the expected output
git-svn-id: https://svn.dealii.org/trunk@32802
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maier [Tue, 22 Apr 2014 10:28:15 +0000 (10:28 +0000)]
Testsuite: Try to normalize boost serialization output
git-svn-id: https://svn.dealii.org/trunk@32801
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kronbichler [Tue, 22 Apr 2014 06:36:56 +0000 (06:36 +0000)]
Use another way to compute the value to be submitted. This should fix the final norm (but not the test case) on the tester
git-svn-id: https://svn.dealii.org/trunk@32800
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kronbichler [Mon, 21 Apr 2014 16:22:37 +0000 (16:22 +0000)]
Yet better information for test case failure: It looks like the big expression containing std::sin is evaluated wrongly whereas when using only individual terms things get right.
git-svn-id: https://svn.dealii.org/trunk@32799
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kronbichler [Mon, 21 Apr 2014 16:22:07 +0000 (16:22 +0000)]
Yet better information for test case failure: It looks like the big expression containing std::sin is evaluated wrongly whereas when using only individual terms things get right.
git-svn-id: https://svn.dealii.org/trunk@32798
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kronbichler [Mon, 21 Apr 2014 08:31:31 +0000 (08:31 +0000)]
Further simplification of test output. Update comment.
git-svn-id: https://svn.dealii.org/trunk@32797
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kronbichler [Sun, 20 Apr 2014 20:35:35 +0000 (20:35 +0000)]
Next step in identifying the problem on the tester: Output the some of the values actually computed
git-svn-id: https://svn.dealii.org/trunk@32796
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bangerth [Sun, 20 Apr 2014 17:28:43 +0000 (17:28 +0000)]
Qualify endl properly.
git-svn-id: https://svn.dealii.org/trunk@32795
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bangerth [Sun, 20 Apr 2014 17:27:00 +0000 (17:27 +0000)]
Only run test when we have PETSc.
git-svn-id: https://svn.dealii.org/trunk@32794
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bangerth [Sun, 20 Apr 2014 17:26:40 +0000 (17:26 +0000)]
Only run test when we have PETSc.
git-svn-id: https://svn.dealii.org/trunk@32793
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kronbichler [Fri, 18 Apr 2014 12:30:52 +0000 (12:30 +0000)]
Simplify test
git-svn-id: https://svn.dealii.org/trunk@32792
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bangerth [Thu, 17 Apr 2014 14:55:11 +0000 (14:55 +0000)]
Many more.
git-svn-id: https://svn.dealii.org/trunk@32790
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maier [Thu, 17 Apr 2014 14:29:13 +0000 (14:29 +0000)]
CMake: Cosmetic changes
And yes, icc is happy again
git-svn-id: https://svn.dealii.org/trunk@32789
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bangerth [Thu, 17 Apr 2014 11:58:55 +0000 (11:58 +0000)]
Extend friendship more so that we can actually declare Accessor::Reference a friend of SparseMatrix.
git-svn-id: https://svn.dealii.org/trunk@32788
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bangerth [Thu, 17 Apr 2014 11:45:45 +0000 (11:45 +0000)]
Patch by k3daevin: Add Reference class as a friend of sparse matrix to make
IBM xlC work.
git-svn-id: https://svn.dealii.org/trunk@32787
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kronbichler [Thu, 17 Apr 2014 09:11:05 +0000 (09:11 +0000)]
Fix a few issues with vectorization that might help simserv04 with Intel min-bundled configuration. Initial detection for AVX512 (but due to hardware not released yet I could not test it).
git-svn-id: https://svn.dealii.org/trunk@32786
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kronbichler [Thu, 17 Apr 2014 05:30:37 +0000 (05:30 +0000)]
Also compare correctness in release mode by replacing Assert by AssertThrow
git-svn-id: https://svn.dealii.org/trunk@32785
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kronbichler [Thu, 17 Apr 2014 05:27:24 +0000 (05:27 +0000)]
Fix comparison when the numbers are denormals
git-svn-id: https://svn.dealii.org/trunk@32784
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kronbichler [Wed, 16 Apr 2014 19:30:38 +0000 (19:30 +0000)]
Add additional tests (simplied version of matrix_free/step-48) to see what is going on
git-svn-id: https://svn.dealii.org/trunk@32783
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heister [Wed, 16 Apr 2014 15:55:15 +0000 (15:55 +0000)]
fix race condition in test mpi/codim_01
git-svn-id: https://svn.dealii.org/trunk@32782
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bangerth [Tue, 15 Apr 2014 02:32:45 +0000 (02:32 +0000)]
Fully qualify some access to make MS Visual Studio happy.
git-svn-id: https://svn.dealii.org/trunk@32780
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bangerth [Mon, 14 Apr 2014 21:32:40 +0000 (21:32 +0000)]
Undo the accidental part of commit 32777.
git-svn-id: https://svn.dealii.org/trunk@32779
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bangerth [Mon, 14 Apr 2014 19:06:57 +0000 (19:06 +0000)]
The name of the 'official' test machine has changed.
git-svn-id: https://svn.dealii.org/trunk@32778
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bangerth [Mon, 14 Apr 2014 18:51:59 +0000 (18:51 +0000)]
Fix a bug in GridTools::find_active_cell_around_point() where we accidentally used tria.n_cells() instead of tria.n_active_cells().
git-svn-id: https://svn.dealii.org/trunk@32777
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bangerth [Mon, 14 Apr 2014 16:49:38 +0000 (16:49 +0000)]
Fix it right.
git-svn-id: https://svn.dealii.org/trunk@32776
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bangerth [Mon, 14 Apr 2014 16:48:58 +0000 (16:48 +0000)]
Undo a commit from a couple of weeks ago that I thought might address
bug #197 (https://code.google.com/p/dealii/issues/detail?id=197) but
in reality only made it worse since it now also makes
build_tests/step-49.{debug,release} fail.
git-svn-id: https://svn.dealii.org/trunk@32775
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bangerth [Mon, 14 Apr 2014 15:51:50 +0000 (15:51 +0000)]
Adjust a number of test results for the new tester machine.
git-svn-id: https://svn.dealii.org/trunk@32774
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bangerth [Mon, 14 Apr 2014 15:47:11 +0000 (15:47 +0000)]
Avoid default arguments on template parameters for function templates.
git-svn-id: https://svn.dealii.org/trunk@32773
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bangerth [Mon, 14 Apr 2014 15:46:00 +0000 (15:46 +0000)]
Adjust tolerance for the new 'tester' machine that produces errors on
the order of 1.5e-12.
git-svn-id: https://svn.dealii.org/trunk@32772
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heister [Sun, 13 Apr 2014 15:02:34 +0000 (15:02 +0000)]
improve comment formatting script
git-svn-id: https://svn.dealii.org/trunk@32771
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bangerth [Sat, 12 Apr 2014 11:43:46 +0000 (11:43 +0000)]
Address a number of warnings about unused variables.
git-svn-id: https://svn.dealii.org/trunk@32769
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kronbichler [Fri, 11 Apr 2014 14:35:41 +0000 (14:35 +0000)]
Adjust serialization output after switch from std::vector to AlignedVector in TableBase.
git-svn-id: https://svn.dealii.org/trunk@32767
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bangerth [Fri, 11 Apr 2014 12:53:15 +0000 (12:53 +0000)]
Update output.
git-svn-id: https://svn.dealii.org/trunk@32765
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bangerth [Fri, 11 Apr 2014 12:52:50 +0000 (12:52 +0000)]
Reorder output slightly so that the big whitespace block comes *after*, not
*before* the timing summary, thereby marking the summary to the *previous*,
not the *next* time step.
git-svn-id: https://svn.dealii.org/trunk@32764
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bangerth [Fri, 11 Apr 2014 12:50:47 +0000 (12:50 +0000)]
Update output.
git-svn-id: https://svn.dealii.org/trunk@32763
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heister [Fri, 11 Apr 2014 11:40:23 +0000 (11:40 +0000)]
add failing test
git-svn-id: https://svn.dealii.org/trunk@32762
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bangerth [Fri, 11 Apr 2014 01:13:54 +0000 (01:13 +0000)]
Mark up a comment in such a way that it appears as part of the code.
git-svn-id: https://svn.dealii.org/trunk@32761
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bangerth [Fri, 11 Apr 2014 00:09:07 +0000 (00:09 +0000)]
Sort. Add a missing year.
git-svn-id: https://svn.dealii.org/trunk@32760
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bangerth [Thu, 10 Apr 2014 16:25:31 +0000 (16:25 +0000)]
Add one.
git-svn-id: https://svn.dealii.org/trunk@32759
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bangerth [Thu, 10 Apr 2014 16:20:01 +0000 (16:20 +0000)]
Fix grammar error.
git-svn-id: https://svn.dealii.org/trunk@32758
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kronbichler [Thu, 10 Apr 2014 12:30:12 +0000 (12:30 +0000)]
Avoid default template argument for function template which requires c++11.
git-svn-id: https://svn.dealii.org/trunk@32757
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young [Thu, 10 Apr 2014 10:19:20 +0000 (10:19 +0000)]
Remove a variable declaration that has been unused for a long time.
git-svn-id: https://svn.dealii.org/trunk@32756
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young [Thu, 10 Apr 2014 09:07:37 +0000 (09:07 +0000)]
Chexk reinit() and m() and n() do not break.
git-svn-id: https://svn.dealii.org/trunk@32755
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young [Thu, 10 Apr 2014 09:06:33 +0000 (09:06 +0000)]
Allow LAAPCKFullMatrix to be reinitialised (reset state).
git-svn-id: https://svn.dealii.org/trunk@32754
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bangerth [Wed, 9 Apr 2014 21:33:07 +0000 (21:33 +0000)]
Qualify a number of names fully to make MS VS++ happy.
git-svn-id: https://svn.dealii.org/trunk@32753
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bangerth [Wed, 9 Apr 2014 20:51:51 +0000 (20:51 +0000)]
Fix grammar error (thanks, Hung-Chieh).
git-svn-id: https://svn.dealii.org/trunk@32752
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bangerth [Wed, 9 Apr 2014 18:54:30 +0000 (18:54 +0000)]
Simplify code by keeping some functions as templates, rather than specializing them.
git-svn-id: https://svn.dealii.org/trunk@32751
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bangerth [Wed, 9 Apr 2014 15:43:22 +0000 (15:43 +0000)]
Remove a comment that is apparently no longer accurate.
git-svn-id: https://svn.dealii.org/trunk@32750
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kronbichler [Wed, 9 Apr 2014 10:02:32 +0000 (10:02 +0000)]
Fix an oversight
git-svn-id: https://svn.dealii.org/trunk@32749
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kronbichler [Wed, 9 Apr 2014 09:44:44 +0000 (09:44 +0000)]
Fix bug in memory consumption of AlignedVector and in some other places. Mention change in Table class and use the table in step-37
git-svn-id: https://svn.dealii.org/trunk@32748
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kronbichler [Wed, 9 Apr 2014 09:22:14 +0000 (09:22 +0000)]
Forgot to update test output
git-svn-id: https://svn.dealii.org/trunk@32747
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kronbichler [Wed, 9 Apr 2014 09:21:14 +0000 (09:21 +0000)]
Rename tests for AlignedVector as aligned_vector_xx, add a test for a bool vector
git-svn-id: https://svn.dealii.org/trunk@32746
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kronbichler [Wed, 9 Apr 2014 08:42:47 +0000 (08:42 +0000)]
Cleanup TableBase implementation from internal AlignedVectorSet/Move functions
git-svn-id: https://svn.dealii.org/trunk@32745
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kanschat [Wed, 9 Apr 2014 07:47:32 +0000 (07:47 +0000)]
update documentation fo FE_BDM
git-svn-id: https://svn.dealii.org/trunk@32744
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kanschat [Wed, 9 Apr 2014 07:45:14 +0000 (07:45 +0000)]
copy RT tests for BDM
git-svn-id: https://svn.dealii.org/trunk@32743
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turcksin [Tue, 8 Apr 2014 23:55:33 +0000 (23:55 +0000)]
Use a more explicit namespace to help MS VC.
git-svn-id: https://svn.dealii.org/trunk@32742
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turcksin [Tue, 8 Apr 2014 23:39:29 +0000 (23:39 +0000)]
Fix a coefficient in the Butcher tableau of DOPRI.
git-svn-id: https://svn.dealii.org/trunk@32741
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kronbichler [Tue, 8 Apr 2014 20:33:01 +0000 (20:33 +0000)]
Use AlignedVector instead of std::vector as data container for TableBase. It uses more memory for Table<N,bool> but let's first see if everything goes smooth with this type.
git-svn-id: https://svn.dealii.org/trunk@32740
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denis.davydov [Tue, 8 Apr 2014 16:39:47 +0000 (16:39 +0000)]
added documentation
git-svn-id: https://svn.dealii.org/branches/branch_sharedtria@32739
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denis.davydov [Tue, 8 Apr 2014 16:35:04 +0000 (16:35 +0000)]
reverted Assert in get_dof_indices since there are no artifical cells and thus all dofs are available on all cells for each processor
git-svn-id: https://svn.dealii.org/branches/branch_sharedtria@32738
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denis.davydov [Tue, 8 Apr 2014 16:32:36 +0000 (16:32 +0000)]
Moved a small part of the code in hp::DoFHandler under if condition to AssertThrow when parallel::shared::Triangulation is used
git-svn-id: https://svn.dealii.org/branches/branch_sharedtria@32737
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heister [Tue, 8 Apr 2014 13:50:25 +0000 (13:50 +0000)]
update test output
git-svn-id: https://svn.dealii.org/trunk@32736
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heister [Tue, 8 Apr 2014 13:46:53 +0000 (13:46 +0000)]
remove obsolete test
git-svn-id: https://svn.dealii.org/trunk@32735
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heister [Tue, 8 Apr 2014 13:46:39 +0000 (13:46 +0000)]
undo r29864 that introduced (level-)subdomain checks in operator< for cell iterators.
git-svn-id: https://svn.dealii.org/trunk@32734
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heister [Tue, 8 Apr 2014 13:19:50 +0000 (13:19 +0000)]
do not rely on cell::operator< comparing subdomain ids in meshworker::loop for ghost faces but do the check manually
git-svn-id: https://svn.dealii.org/trunk@32733
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heister [Tue, 8 Apr 2014 13:06:33 +0000 (13:06 +0000)]
add another test for parallel meshworker for ghost faces
git-svn-id: https://svn.dealii.org/trunk@32732
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bangerth [Tue, 8 Apr 2014 03:00:45 +0000 (03:00 +0000)]
Fix spelling. Doh!
git-svn-id: https://svn.dealii.org/trunk@32731
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bangerth [Mon, 7 Apr 2014 23:17:04 +0000 (23:17 +0000)]
Work some more to get MS VC to like the code.
git-svn-id: https://svn.dealii.org/trunk@32730
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bangerth [Mon, 7 Apr 2014 20:42:02 +0000 (20:42 +0000)]
Add a test that currently fails.
git-svn-id: https://svn.dealii.org/trunk@32729
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bangerth [Mon, 7 Apr 2014 19:28:01 +0000 (19:28 +0000)]
Call reorder_cells() in merge_triangulations(), though this does not help for the current case.
git-svn-id: https://svn.dealii.org/trunk@32727
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kronbichler [Mon, 7 Apr 2014 19:02:54 +0000 (19:02 +0000)]
Remove stray default arguments
git-svn-id: https://svn.dealii.org/trunk@32726
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bangerth [Mon, 7 Apr 2014 18:04:21 +0000 (18:04 +0000)]
Patch by Denis Davydov: Add an optional argument to GridTools::laplace_transform that indicates the local stiffness.
git-svn-id: https://svn.dealii.org/trunk@32725
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bangerth [Mon, 7 Apr 2014 16:14:45 +0000 (16:14 +0000)]
Change the signature of approximate_derivative_tensor in hopes of convincing MS Visual C++ that everything with it is alright...
git-svn-id: https://svn.dealii.org/trunk@32724
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