]>
https://gitweb.dealii.org/ - dealii.git/log
Matthias Maier [Wed, 31 Jul 2013 08:54:27 +0000 (08:54 +0000)]
Fix a compilation issue with LLVMs libc++
Due to more restrictive include policy template<class T1, class T2> struct pair
is not already defined in std at this point. Unfortunately, a forward
declaration is invalid because it doesn't allow for instantiations:
"error: implicit instantiation of undefined template"
Furthermore, ISO/IEC C++ 2011 Standard, section 17.6.4.2.1 prohibits such
manipulation of the namespace std.
git-svn-id: https://svn.dealii.org/branches/branch_port_to_libcxx@30189
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Matthias Maier [Wed, 31 Jul 2013 08:51:51 +0000 (08:51 +0000)]
Create a branch for porting to libcxx
git-svn-id: https://svn.dealii.org/branches/branch_port_to_libcxx@30188
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Matthias Maier [Tue, 30 Jul 2013 09:22:03 +0000 (09:22 +0000)]
CMake: And guard the last to occurences of a C compiler as well
git-svn-id: https://svn.dealii.org/trunk@30184
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Matthias Maier [Tue, 30 Jul 2013 09:15:30 +0000 (09:15 +0000)]
CMake: *sigh*
git-svn-id: https://svn.dealii.org/trunk@30183
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Matthias Maier [Tue, 30 Jul 2013 08:58:51 +0000 (08:58 +0000)]
CMake: Bugfix, use use supplied cxx flags throughout the configure phase, clean up CMAKE_REQUIRED_* setup and update documentation
git-svn-id: https://svn.dealii.org/trunk@30182
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Timo Heister [Tue, 30 Jul 2013 03:02:49 +0000 (03:02 +0000)]
add failing test
git-svn-id: https://svn.dealii.org/trunk@30181
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Timo Heister [Tue, 30 Jul 2013 02:35:34 +0000 (02:35 +0000)]
add test
git-svn-id: https://svn.dealii.org/trunk@30180
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Timo Heister [Tue, 30 Jul 2013 02:35:22 +0000 (02:35 +0000)]
throw when you create a FE_Q of degree 0 (otherwise we try to allocate a LOT of memory)
git-svn-id: https://svn.dealii.org/trunk@30179
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Wolfgang Bangerth [Sun, 28 Jul 2013 18:32:53 +0000 (18:32 +0000)]
Clarify that a variable is a number of neighbors, not a has some/has no neighbors boolean.
git-svn-id: https://svn.dealii.org/trunk@30178
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Wolfgang Bangerth [Sun, 28 Jul 2013 18:32:49 +0000 (18:32 +0000)]
Fix a typo. Add another half sentence.
git-svn-id: https://svn.dealii.org/trunk@30177
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Wolfgang Bangerth [Sun, 28 Jul 2013 18:32:44 +0000 (18:32 +0000)]
Align semicolon as usual.
git-svn-id: https://svn.dealii.org/trunk@30176
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Wolfgang Bangerth [Sat, 27 Jul 2013 15:35:03 +0000 (15:35 +0000)]
Minor adjustments.
git-svn-id: https://svn.dealii.org/trunk@30175
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Matthias Maier [Sat, 27 Jul 2013 12:23:29 +0000 (12:23 +0000)]
CMake: Adjust MPI error message
git-svn-id: https://svn.dealii.org/trunk@30174
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Matthias Maier [Sat, 27 Jul 2013 12:15:16 +0000 (12:15 +0000)]
CMake: Cleanup
git-svn-id: https://svn.dealii.org/trunk@30173
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Matthias Maier [Sat, 27 Jul 2013 12:12:34 +0000 (12:12 +0000)]
CMake: Cleanup and restructure
git-svn-id: https://svn.dealii.org/trunk@30172
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Matthias Maier [Sat, 27 Jul 2013 11:48:15 +0000 (11:48 +0000)]
CMake: Fix typos
git-svn-id: https://svn.dealii.org/trunk@30171
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Matthias Maier [Sat, 27 Jul 2013 11:32:59 +0000 (11:32 +0000)]
CMake: A new header for Make.global_options as well
git-svn-id: https://svn.dealii.org/trunk@30170
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Matthias Maier [Sat, 27 Jul 2013 11:26:39 +0000 (11:26 +0000)]
CMake: Cleanup deal.IIConfig.cmake a bit
git-svn-id: https://svn.dealii.org/trunk@30169
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Matthias Maier [Sat, 27 Jul 2013 11:12:52 +0000 (11:12 +0000)]
Adapt step-18 to the resent changes in DataOut
git-svn-id: https://svn.dealii.org/trunk@30168
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Wolfgang Bangerth [Sat, 27 Jul 2013 10:51:45 +0000 (10:51 +0000)]
No need for 'typename'.
git-svn-id: https://svn.dealii.org/trunk@30167
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Wolfgang Bangerth [Fri, 26 Jul 2013 22:58:02 +0000 (22:58 +0000)]
Also instantiate a member template.
git-svn-id: https://svn.dealii.org/trunk@30166
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Wolfgang Bangerth [Fri, 26 Jul 2013 20:53:24 +0000 (20:53 +0000)]
Add explicit instantiations.
git-svn-id: https://svn.dealii.org/trunk@30165
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Wolfgang Bangerth [Fri, 26 Jul 2013 18:23:16 +0000 (18:23 +0000)]
Fix names of header files.
git-svn-id: https://svn.dealii.org/trunk@30164
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Wolfgang Bangerth [Fri, 26 Jul 2013 18:20:35 +0000 (18:20 +0000)]
Improve error message.
git-svn-id: https://svn.dealii.org/trunk@30163
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Wolfgang Bangerth [Fri, 26 Jul 2013 16:31:42 +0000 (16:31 +0000)]
Fix wrong link (thanks, Jean!).
git-svn-id: https://svn.dealii.org/trunk@30162
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Joerg Frohne [Fri, 26 Jul 2013 15:34:23 +0000 (15:34 +0000)]
Diss of nicole klein 2013
git-svn-id: https://svn.dealii.org/trunk@30161
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Wolfgang Bangerth [Fri, 26 Jul 2013 13:45:27 +0000 (13:45 +0000)]
Update.
git-svn-id: https://svn.dealii.org/trunk@30160
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Wolfgang Bangerth [Fri, 26 Jul 2013 11:30:37 +0000 (11:30 +0000)]
Fix comment.
git-svn-id: https://svn.dealii.org/trunk@30159
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Bruno Turcksin [Thu, 25 Jul 2013 15:18:48 +0000 (15:18 +0000)]
Fix a bug when using 64bit indices.
git-svn-id: https://svn.dealii.org/trunk@30158
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Wolfgang Bangerth [Thu, 25 Jul 2013 13:54:49 +0000 (13:54 +0000)]
Link to download site from news page.
git-svn-id: https://svn.dealii.org/trunk@30157
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Wolfgang Bangerth [Thu, 25 Jul 2013 11:57:24 +0000 (11:57 +0000)]
Re-indent function argument list.
git-svn-id: https://svn.dealii.org/trunk@30156
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Wolfgang Bangerth [Thu, 25 Jul 2013 11:07:04 +0000 (11:07 +0000)]
Remove instantiation of a non-public function. This shouldn't be necessary since the function is now in an anonymous namespace and is not exported anyway.
git-svn-id: https://svn.dealii.org/trunk@30155
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Wolfgang Bangerth [Thu, 25 Jul 2013 10:53:32 +0000 (10:53 +0000)]
Patch by Felix Gruber: Fix all sorts of misspellings and documentation markup fixes.
git-svn-id: https://svn.dealii.org/trunk@30154
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Matthias Maier [Thu, 25 Jul 2013 08:28:41 +0000 (08:28 +0000)]
Reindent parameters in grid_generator.h
git-svn-id: https://svn.dealii.org/trunk@30153
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Wolfgang Bangerth [Wed, 24 Jul 2013 18:23:20 +0000 (18:23 +0000)]
Do not execute tutorial programs with mpirun -np 2. It violates the element of least surprise rule.
git-svn-id: https://svn.dealii.org/trunk@30152
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Martin Kronbichler [Wed, 24 Jul 2013 15:43:22 +0000 (15:43 +0000)]
Make tests work: convert DoFHandler::cell_iterator to DataOut::cell_iterator
git-svn-id: https://svn.dealii.org/trunk@30151
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Martin Kronbichler [Wed, 24 Jul 2013 14:28:03 +0000 (14:28 +0000)]
Implement DataOut::add_data_vector with DoFHandler argument to allow for different DoFHandlers
git-svn-id: https://svn.dealii.org/trunk@30150
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Wolfgang Bangerth [Wed, 24 Jul 2013 12:58:44 +0000 (12:58 +0000)]
Change GridGenerator from a class to a namespace. Undo introduction of local typedef size_type.
git-svn-id: https://svn.dealii.org/trunk@30149
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Wolfgang Bangerth [Wed, 24 Jul 2013 11:40:19 +0000 (11:40 +0000)]
Better document GridTools::laplace_transform.
git-svn-id: https://svn.dealii.org/trunk@30148
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Matthias Maier [Wed, 24 Jul 2013 09:28:41 +0000 (09:28 +0000)]
Change the comment headers in the examples so that they don't get stripped
away by strip_comments
git-svn-id: https://svn.dealii.org/trunk@30147
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Wolfgang Bangerth [Wed, 24 Jul 2013 03:02:22 +0000 (03:02 +0000)]
Get it right this time...
git-svn-id: https://svn.dealii.org/trunk@30146
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Wolfgang Bangerth [Tue, 23 Jul 2013 21:07:44 +0000 (21:07 +0000)]
Set the executable flag. Also adjust the starting revision number.
git-svn-id: https://svn.dealii.org/trunk@30145
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Timo Heister [Tue, 23 Jul 2013 20:58:39 +0000 (20:58 +0000)]
benchmark: index.html is being generated
git-svn-id: https://svn.dealii.org/trunk@30144
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Timo Heister [Tue, 23 Jul 2013 20:56:54 +0000 (20:56 +0000)]
update benchmark (cmake, interactive graphs, etc.)
git-svn-id: https://svn.dealii.org/trunk@30143
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Wolfgang Bangerth [Tue, 23 Jul 2013 20:02:51 +0000 (20:02 +0000)]
Also assume that MPI is present when generating documentation.
git-svn-id: https://svn.dealii.org/trunk@30142
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Wolfgang Bangerth [Tue, 23 Jul 2013 19:55:47 +0000 (19:55 +0000)]
Normalize results in a more useful way: don't just replace one version number by another, but by a generic string. This way we no longer have to bump version numbers every time we make a release.
git-svn-id: https://svn.dealii.org/trunk@30141
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Matthias Maier [Tue, 23 Jul 2013 17:24:57 +0000 (17:24 +0000)]
Update a remaining license header
git-svn-id: https://svn.dealii.org/trunk@30136
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Wolfgang Bangerth [Tue, 23 Jul 2013 16:32:21 +0000 (16:32 +0000)]
Remove a vestige from the days of gcc2.95.
git-svn-id: https://svn.dealii.org/trunk@30135
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Wolfgang Bangerth [Tue, 23 Jul 2013 15:39:41 +0000 (15:39 +0000)]
Add something.
git-svn-id: https://svn.dealii.org/trunk@30133
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Wolfgang Bangerth [Tue, 23 Jul 2013 13:49:55 +0000 (13:49 +0000)]
Fix some broken links. Update file properties.
git-svn-id: https://svn.dealii.org/trunk@30131
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Matthias Maier [Tue, 23 Jul 2013 09:13:42 +0000 (09:13 +0000)]
CMake: Silence clang warnings about unused arguments
git-svn-id: https://svn.dealii.org/trunk@30125
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Matthias Maier [Tue, 23 Jul 2013 09:13:41 +0000 (09:13 +0000)]
CMake: Bugfix, use the same Generator for when querying for language support.
git-svn-id: https://svn.dealii.org/trunk@30124
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Martin Kronbichler [Tue, 23 Jul 2013 08:33:32 +0000 (08:33 +0000)]
Add instantiations for dim=1, spacedim=3 to avoid undefined symbols with Intel compiler
git-svn-id: https://svn.dealii.org/trunk@30123
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Martin Kronbichler [Tue, 23 Jul 2013 06:45:12 +0000 (06:45 +0000)]
Fix warning with clang: Do not use -funroll-all-loops
git-svn-id: https://svn.dealii.org/trunk@30122
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Wolfgang Bangerth [Mon, 22 Jul 2013 23:58:09 +0000 (23:58 +0000)]
Move tests that currently fail.
git-svn-id: https://svn.dealii.org/trunk@30121
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Wolfgang Bangerth [Mon, 22 Jul 2013 23:55:08 +0000 (23:55 +0000)]
Add a test that currently fails.
git-svn-id: https://svn.dealii.org/trunk@30120
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Matthias Maier [Mon, 22 Jul 2013 23:19:52 +0000 (23:19 +0000)]
CMake: Implement ENABLE_LANGUAGE_OPTIONAL
git-svn-id: https://svn.dealii.org/trunk@30118
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Matthias Maier [Mon, 22 Jul 2013 21:59:48 +0000 (21:59 +0000)]
CMake: Be a bit more flexible in finding BLACS on DARWIN
git-svn-id: https://svn.dealii.org/trunk@30117
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Wolfgang Bangerth [Mon, 22 Jul 2013 21:38:13 +0000 (21:38 +0000)]
Get link to post-8.0 changes back in.
git-svn-id: https://svn.dealii.org/trunk@30116
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Timo Heister [Mon, 22 Jul 2013 21:35:18 +0000 (21:35 +0000)]
update ignores
git-svn-id: https://svn.dealii.org/trunk@30115
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Timo Heister [Mon, 22 Jul 2013 21:32:25 +0000 (21:32 +0000)]
release step 7
git-svn-id: https://svn.dealii.org/trunk@30113
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Timo Heister [Mon, 22 Jul 2013 21:28:52 +0000 (21:28 +0000)]
update version information
git-svn-id: https://svn.dealii.org/trunk@30110
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Timo Heister [Mon, 22 Jul 2013 21:25:02 +0000 (21:25 +0000)]
release step: 1, adjust changes
git-svn-id: https://svn.dealii.org/trunk@30108
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Wolfgang Bangerth [Mon, 22 Jul 2013 21:24:52 +0000 (21:24 +0000)]
Comment out link to recent changes.
git-svn-id: https://svn.dealii.org/trunk@30107
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Wolfgang Bangerth [Mon, 22 Jul 2013 21:23:43 +0000 (21:23 +0000)]
Announce 8.0.
git-svn-id: https://svn.dealii.org/trunk@30106
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Wolfgang Bangerth [Mon, 22 Jul 2013 20:48:39 +0000 (20:48 +0000)]
Several more.
git-svn-id: https://svn.dealii.org/trunk@30105
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Timo Heister [Mon, 22 Jul 2013 20:28:28 +0000 (20:28 +0000)]
add funroll-all-loops if using gcc
git-svn-id: https://svn.dealii.org/trunk@30104
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Matthias Maier [Mon, 22 Jul 2013 19:35:24 +0000 (19:35 +0000)]
CMake: A small workaround
git-svn-id: https://svn.dealii.org/trunk@30103
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Wolfgang Bangerth [Mon, 22 Jul 2013 19:21:43 +0000 (19:21 +0000)]
New test. Currently fails, but clearly demonstrates the problem. The 'generic' output file has been verified to be correct.
git-svn-id: https://svn.dealii.org/trunk@30102
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Wolfgang Bangerth [Mon, 22 Jul 2013 19:21:14 +0000 (19:21 +0000)]
Fix the current failure of the various dof_test_21_b variants.
git-svn-id: https://svn.dealii.org/trunk@30101
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Wolfgang Bangerth [Mon, 22 Jul 2013 18:35:56 +0000 (18:35 +0000)]
New tests. The outputs have been verified to be correct and have been generated with r29524, which is correct.
git-svn-id: https://svn.dealii.org/trunk@30100
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Wolfgang Bangerth [Mon, 22 Jul 2013 18:12:40 +0000 (18:12 +0000)]
Remove unused variable.
git-svn-id: https://svn.dealii.org/trunk@30099
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Wolfgang Bangerth [Mon, 22 Jul 2013 18:11:42 +0000 (18:11 +0000)]
Remove unused variable.
git-svn-id: https://svn.dealii.org/trunk@30098
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Wolfgang Bangerth [Mon, 22 Jul 2013 15:28:27 +0000 (15:28 +0000)]
Set optimization flags for ICC to -O1 in accordance with the findings
here: http://code.google.com/p/dealii/issues/detail?id=30 . We may
revisit the issue at a later time, but for the moment this is the safe
approach.
git-svn-id: https://svn.dealii.org/trunk@30097
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Wolfgang Bangerth [Mon, 22 Jul 2013 15:18:35 +0000 (15:18 +0000)]
Adjust output that differs by round-off.
git-svn-id: https://svn.dealii.org/trunk@30096
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Timo Heister [Mon, 22 Jul 2013 13:52:46 +0000 (13:52 +0000)]
add publication
git-svn-id: https://svn.dealii.org/trunk@30095
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Timo Heister [Mon, 22 Jul 2013 13:50:37 +0000 (13:50 +0000)]
add publication
git-svn-id: https://svn.dealii.org/trunk@30094
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Wolfgang Bangerth [Mon, 22 Jul 2013 12:56:52 +0000 (12:56 +0000)]
Avoid filling a map with numeric_limit<types::boundary_id>::max() elements -- too many if we ever increase the number of bits in boundary_id.
git-svn-id: https://svn.dealii.org/trunk@30093
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Wolfgang Bangerth [Mon, 22 Jul 2013 12:44:57 +0000 (12:44 +0000)]
Fix a bug.
git-svn-id: https://svn.dealii.org/trunk@30092
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Martin Kronbichler [Mon, 22 Jul 2013 12:15:19 +0000 (12:15 +0000)]
Adjust output
git-svn-id: https://svn.dealii.org/trunk@30091
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Martin Kronbichler [Mon, 22 Jul 2013 09:43:59 +0000 (09:43 +0000)]
Fix global_dof_index in matrix-free class: It should only be used when dealing with deal.II's global dof indices, not the matrix-free dof indices which are transformed into a process-local index space and start at zero on all processors. This limits the MPI-local problem size to 4 billion, but i) that limit is still far away and ii) there were many internal uses of unsigned int left that would have needed re-organization. This change saves memory as dof indices can be saved in 32-bit integer instead of 64-bit integers and still allows problems with >4g global dofs.
git-svn-id: https://svn.dealii.org/trunk@30090
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Martin Kronbichler [Mon, 22 Jul 2013 09:38:03 +0000 (09:38 +0000)]
Prettify output
git-svn-id: https://svn.dealii.org/trunk@30089
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Martin Kronbichler [Mon, 22 Jul 2013 06:07:51 +0000 (06:07 +0000)]
Remove stray typename
git-svn-id: https://svn.dealii.org/trunk@30088
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Martin Kronbichler [Mon, 22 Jul 2013 06:03:33 +0000 (06:03 +0000)]
Simplify test case
git-svn-id: https://svn.dealii.org/trunk@30087
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Wolfgang Bangerth [Mon, 22 Jul 2013 02:58:54 +0000 (02:58 +0000)]
Implement VectorTools::project also for hp::DoFHandler. This required refactoring a whole bunch of other functions as well, as well as a good number of additional instantiations.
git-svn-id: https://svn.dealii.org/trunk@30086
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Wolfgang Bangerth [Mon, 22 Jul 2013 02:46:30 +0000 (02:46 +0000)]
Fix disabling bug in hp::DoFHandler::n_boundary_dofs().
git-svn-id: https://svn.dealii.org/trunk@30085
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Wolfgang Bangerth [Mon, 22 Jul 2013 01:59:20 +0000 (01:59 +0000)]
Put the cheap condition first in a conditional.
git-svn-id: https://svn.dealii.org/trunk@30084
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Wolfgang Bangerth [Sun, 21 Jul 2013 23:56:00 +0000 (23:56 +0000)]
Update comment to match what we are currently doing.
git-svn-id: https://svn.dealii.org/trunk@30083
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Timo Heister [Sun, 21 Jul 2013 23:47:29 +0000 (23:47 +0000)]
revert to iterating back-wards which was changed in r30061 and broke a couple of tests (I don't understand why exactly though)
git-svn-id: https://svn.dealii.org/trunk@30082
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Timo Heister [Sun, 21 Jul 2013 23:45:46 +0000 (23:45 +0000)]
more publicatoins
git-svn-id: https://svn.dealii.org/trunk@30081
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Wolfgang Bangerth [Sun, 21 Jul 2013 22:56:58 +0000 (22:56 +0000)]
Provide the same comments for begin_active/end_active as for the other DoFHandler and Triangulation.
git-svn-id: https://svn.dealii.org/trunk@30080
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Timo Heister [Sun, 21 Jul 2013 22:35:18 +0000 (22:35 +0000)]
add publications (and remove preprints)
git-svn-id: https://svn.dealii.org/trunk@30079
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Matthias Maier [Sat, 20 Jul 2013 12:35:01 +0000 (12:35 +0000)]
Remove test_affinity from the build system for now until we have a final design decision ;-)
git-svn-id: https://svn.dealii.org/trunk@30078
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Wolfgang Bangerth [Sat, 20 Jul 2013 12:07:47 +0000 (12:07 +0000)]
Also avoid a potentially endless loop. Fix typo.
git-svn-id: https://svn.dealii.org/trunk@30077
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Wolfgang Bangerth [Sat, 20 Jul 2013 12:07:03 +0000 (12:07 +0000)]
Fix a thinko.
git-svn-id: https://svn.dealii.org/trunk@30076
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Wolfgang Bangerth [Sat, 20 Jul 2013 11:56:00 +0000 (11:56 +0000)]
Add appropriate header file.
git-svn-id: https://svn.dealii.org/trunk@30075
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Matthias Maier [Sat, 20 Jul 2013 08:31:48 +0000 (08:31 +0000)]
CMake: Make sure to compile test_affinity.cc correctly
git-svn-id: https://svn.dealii.org/trunk@30074
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Matthias Maier [Sat, 20 Jul 2013 08:25:44 +0000 (08:25 +0000)]
add test_affinity program, refactor slightly
git-svn-id: https://svn.dealii.org/trunk@30073
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Matthias Maier [Fri, 19 Jul 2013 23:16:27 +0000 (23:16 +0000)]
Update Author for step-49
git-svn-id: https://svn.dealii.org/trunk@30072
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Timo Heister [Fri, 19 Jul 2013 21:48:50 +0000 (21:48 +0000)]
update petsc/trilinos documentation
git-svn-id: https://svn.dealii.org/trunk@30071
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