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dealii.git
15 months agoMerge pull request #15339 from bangerth/e
Martin Kronbichler [Mon, 12 Jun 2023 13:57:52 +0000 (15:57 +0200)]
Merge pull request #15339 from bangerth/e

Minor adjustments to FETools::extrapolate().

15 months agoMerge pull request #15336 from jh66637/fepe_dg_multicomp
Martin Kronbichler [Mon, 12 Jun 2023 12:51:50 +0000 (14:51 +0200)]
Merge pull request #15336 from jh66637/fepe_dg_multicomp

Fix renumbering in FEPointEvaluation

15 months agoFix numbering for multiple components and first selected component in FEPEval 15336/head
Johannes Heinz [Fri, 9 Jun 2023 17:32:56 +0000 (19:32 +0200)]
Fix numbering for multiple components and first selected component in FEPEval

Co-authored-by: Peter Munch <peter.muench@uni-a.de>
15 months agoMerge pull request #15330 from bangerth/traits
David Wells [Sat, 10 Jun 2023 12:19:32 +0000 (08:19 -0400)]
Merge pull request #15330 from bangerth/traits

Adjust iterator traits classes for C++20.

15 months agoMerge pull request #14657 from ivweber/pull_request_polynomials
Matthias Maier [Sat, 10 Jun 2023 03:53:31 +0000 (03:53 +0000)]
Merge pull request #14657 from ivweber/pull_request_polynomials

Hermite polynomials

15 months agoRemove a variable that is no longer needed. 15339/head
Wolfgang Bangerth [Sat, 10 Jun 2023 03:31:15 +0000 (21:31 -0600)]
Remove a variable that is no longer needed.

Specifically, the variable was only ever written to, never read.

15 months agoSimplify code.
Wolfgang Bangerth [Thu, 8 Jun 2023 22:36:10 +0000 (16:36 -0600)]
Simplify code.

15 months agoMinor adjustments to FETools::extrapolate().
Wolfgang Bangerth [Sat, 10 Jun 2023 03:29:56 +0000 (21:29 -0600)]
Minor adjustments to FETools::extrapolate().

15 months agoMerge pull request #15331 from bangerth/copy-from
Marc Fehling [Fri, 9 Jun 2023 18:41:15 +0000 (12:41 -0600)]
Merge pull request #15331 from bangerth/copy-from

Add a test.

15 months agoMerge pull request #15334 from jh66637/add_assert
Marc Fehling [Fri, 9 Jun 2023 18:40:09 +0000 (12:40 -0600)]
Merge pull request #15334 from jh66637/add_assert

ensure distribute_local_to_global() is called with contiguous iterators

15 months agoMerge pull request #15335 from Rombur/fix_typo
Marc Fehling [Fri, 9 Jun 2023 18:39:33 +0000 (12:39 -0600)]
Merge pull request #15335 from Rombur/fix_typo

Fix a typo in step-8

15 months agobase: implement Hermite polynomials 14657/head
Ivy Weber [Tue, 10 Jan 2023 12:08:37 +0000 (13:08 +0100)]
base: implement Hermite polynomials

15 months agoMerge pull request #15283 from masterleinad/cmake_kokkos_targets
Matthias Maier [Fri, 9 Jun 2023 17:33:33 +0000 (17:33 +0000)]
Merge pull request #15283 from masterleinad/cmake_kokkos_targets

Use Kokkos CMake targets

15 months agoWhen available, use the C++20 iterator category. 15330/head
Wolfgang Bangerth [Thu, 8 Jun 2023 21:07:34 +0000 (15:07 -0600)]
When available, use the C++20 iterator category.

15 months agoFix typo 15335/head
Bruno Turcksin [Fri, 9 Jun 2023 14:07:38 +0000 (14:07 +0000)]
Fix typo

15 months agoensure distribute_local_to_global() is called with contiguous iterators 15334/head
Johannes Heinz [Fri, 9 Jun 2023 09:25:32 +0000 (11:25 +0200)]
ensure distribute_local_to_global() is called with contiguous iterators

15 months agoMerge pull request #15328 from drwells/active-cell-simplices
Daniel Arndt [Fri, 9 Jun 2023 03:44:14 +0000 (23:44 -0400)]
Merge pull request #15328 from drwells/active-cell-simplices

15 months agofind_active_cell_around_point(): add a simplex test. 15328/head
David Wells [Thu, 8 Jun 2023 19:54:48 +0000 (15:54 -0400)]
find_active_cell_around_point(): add a simplex test.

15 months agoGridTools::Cache: avoid GeometryInfo.
David Wells [Thu, 8 Jun 2023 18:04:22 +0000 (14:04 -0400)]
GridTools::Cache: avoid GeometryInfo.

15 months agofind_active_cell_around_point(): avoid GeometryInfo.
David Wells [Thu, 8 Jun 2023 18:04:00 +0000 (14:04 -0400)]
find_active_cell_around_point(): avoid GeometryInfo.

15 months agoAdd a test. 15331/head
Wolfgang Bangerth [Thu, 8 Jun 2023 23:30:15 +0000 (17:30 -0600)]
Add a test.

15 months agoEnable make_array_view() also for C++20-style contiguous iterators.
Wolfgang Bangerth [Thu, 8 Jun 2023 21:04:18 +0000 (15:04 -0600)]
Enable make_array_view() also for C++20-style contiguous iterators.

15 months agoInherit iterator traits from the underlying class.
Wolfgang Bangerth [Thu, 8 Jun 2023 21:02:44 +0000 (15:02 -0600)]
Inherit iterator traits from the underlying class.

15 months agoMerge pull request #15304 from jh66637/change_function_names
Martin Kronbichler [Thu, 8 Jun 2023 18:01:18 +0000 (20:01 +0200)]
Merge pull request #15304 from jh66637/change_function_names

use FEPE::get_normal_vector() to be consistent with FEE

15 months agofind_active_cell_around_point(): use auto.
David Wells [Thu, 8 Jun 2023 16:41:13 +0000 (12:41 -0400)]
find_active_cell_around_point(): use auto.

15 months agoMerge pull request #15292 from jh66637/add_flag_for_scaled_weights
David Wells [Thu, 8 Jun 2023 16:35:32 +0000 (12:35 -0400)]
Merge pull request #15292 from jh66637/add_flag_for_scaled_weights

Add flag to NM::MappingInfo reinit functions

15 months agoMerge pull request #15266 from pcafrica/vtk_support
Luca Heltai [Thu, 8 Jun 2023 07:17:21 +0000 (09:17 +0200)]
Merge pull request #15266 from pcafrica/vtk_support

Added support for VTK

15 months agoMerge pull request #15326 from kronbichler/fix_warning3
Marc Fehling [Wed, 7 Jun 2023 21:39:11 +0000 (15:39 -0600)]
Merge pull request #15326 from kronbichler/fix_warning3

Fix compiler warning with clang-16

15 months agoMerge pull request #15325 from masterleinad/fix_trilinos_14_cuda
Marc Fehling [Wed, 7 Jun 2023 21:15:47 +0000 (15:15 -0600)]
Merge pull request #15325 from masterleinad/fix_trilinos_14_cuda

Fix compiling with Trilinos 14 and Cuda

15 months agoMerge pull request #15324 from masterleinad/remove_unused_mpi_communicator_ptr
Marc Fehling [Wed, 7 Jun 2023 19:58:56 +0000 (13:58 -0600)]
Merge pull request #15324 from masterleinad/remove_unused_mpi_communicator_ptr

Remove unused mpi_communicator pointer members initialized by temporaries

15 months agoFix compiler warning with clang-16 15326/head
Martin Kronbichler [Wed, 7 Jun 2023 19:15:23 +0000 (21:15 +0200)]
Fix compiler warning with clang-16

15 months agoMerge pull request #15318 from jh66637/distribute_local_to_global
Martin Kronbichler [Wed, 7 Jun 2023 18:50:02 +0000 (20:50 +0200)]
Merge pull request #15318 from jh66637/distribute_local_to_global

Make distribute_local_to_global() work with std:: iterators

15 months agoExplicitly specify type in ParticleHandler for nvcc 15325/head
Daniel Arndt [Wed, 7 Jun 2023 15:03:15 +0000 (15:03 +0000)]
Explicitly specify type in ParticleHandler for nvcc

15 months agoExplicitly add Kokkos::kokkos to Trilinos targets
Daniel Arndt [Wed, 7 Jun 2023 15:01:50 +0000 (15:01 +0000)]
Explicitly add Kokkos::kokkos to Trilinos targets

15 months agoMerge pull request #15295 from bangerth/unify
David Wells [Wed, 7 Jun 2023 12:57:47 +0000 (08:57 -0400)]
Merge pull request #15295 from bangerth/unify

Unify multiple copies of the same function.

15 months agoRemove unused mpi_communicator pointer members initialized by temporaries 15324/head
Daniel Arndt [Wed, 7 Jun 2023 12:22:25 +0000 (08:22 -0400)]
Remove unused mpi_communicator pointer members initialized by temporaries

15 months agoadd NM::MappingInfo::AD to be able to reinit with global weights 15292/head
Johannes Heinz [Thu, 1 Jun 2023 15:44:45 +0000 (17:44 +0200)]
add NM::MappingInfo::AD to be able to reinit with global weights

15 months agomake distribute_local_to_global() work with std:: iterators 15318/head
Johannes Heinz [Tue, 6 Jun 2023 16:14:22 +0000 (18:14 +0200)]
make distribute_local_to_global() work with std:: iterators

15 months agoMerge pull request #15322 from marcfehling/isnan-2
Martin Kronbichler [Wed, 7 Jun 2023 08:15:56 +0000 (10:15 +0200)]
Merge pull request #15322 from marcfehling/isnan-2

Prefer numbers::is_nan over std::isnan

15 months agouse FEEval::normal_vector() to be consistent with FEValues and FEPEval 15304/head
Johannes Heinz [Mon, 5 Jun 2023 13:20:40 +0000 (15:20 +0200)]
use FEEval::normal_vector() to be consistent with FEValues and FEPEval

15 months agoMerge pull request #15321 from marcfehling/github-intel-icx
Daniel Arndt [Wed, 7 Jun 2023 03:34:10 +0000 (23:34 -0400)]
Merge pull request #15321 from marcfehling/github-intel-icx

15 months agoMerge pull request #15316 from bangerth/69
Marc Fehling [Tue, 6 Jun 2023 21:23:11 +0000 (15:23 -0600)]
Merge pull request #15316 from bangerth/69

Minor updates to step-69.

15 months agoMerge pull request #15317 from bangerth/62
Marc Fehling [Tue, 6 Jun 2023 21:22:49 +0000 (15:22 -0600)]
Merge pull request #15317 from bangerth/62

Minor updates to step-62.

15 months agoPrefer numbers::is_nan over std::isnan 15322/head
Marc Fehling [Tue, 6 Jun 2023 21:20:35 +0000 (15:20 -0600)]
Prefer numbers::is_nan over std::isnan

15 months agoOnly install new Intel compilers. 15321/head
Marc Fehling [Mon, 5 Jun 2023 16:46:09 +0000 (10:46 -0600)]
Only install new Intel compilers.

15 months agoMerge pull request #15308 from masterleinad/test_icpx
Marc Fehling [Tue, 6 Jun 2023 21:05:55 +0000 (15:05 -0600)]
Merge pull request #15308 from masterleinad/test_icpx

Test icpx instead of icpc

15 months agoMerge pull request #15315 from bangerth/const
Daniel Arndt [Tue, 6 Jun 2023 19:06:07 +0000 (15:06 -0400)]
Merge pull request #15315 from bangerth/const

15 months agoAnother try for MSVC 15308/head
Daniel Arndt [Tue, 6 Jun 2023 14:14:23 +0000 (10:14 -0400)]
Another try for MSVC

15 months agoMerge pull request #15314 from marcfehling/isfinite
Wolfgang Bangerth [Tue, 6 Jun 2023 14:36:17 +0000 (08:36 -0600)]
Merge pull request #15314 from marcfehling/isfinite

Use numbers::is_finite whenever we compare with infinity.

15 months agoMinor updates to step-62. 15317/head
Wolfgang Bangerth [Tue, 6 Jun 2023 14:34:41 +0000 (08:34 -0600)]
Minor updates to step-62.

15 months agoMinor updates to step-69. 15316/head
Wolfgang Bangerth [Tue, 6 Jun 2023 14:33:21 +0000 (08:33 -0600)]
Minor updates to step-69.

15 months agoMark loop indices as 'const' where possible. 15315/head
Wolfgang Bangerth [Tue, 6 Jun 2023 14:21:06 +0000 (08:21 -0600)]
Mark loop indices as 'const' where possible.

15 months agoMerge pull request #15313 from bangerth/args
David Wells [Tue, 6 Jun 2023 12:33:30 +0000 (08:33 -0400)]
Merge pull request #15313 from bangerth/args

Be systematic in how we name arguments of FEValues member functions.

15 months agoMerge pull request #15164 from masterleinad/trilinos_14
Matthias Maier [Tue, 6 Jun 2023 05:27:06 +0000 (05:27 +0000)]
Merge pull request #15164 from masterleinad/trilinos_14

Allow using Trilinos 14.0

15 months agoMerge pull request #15307 from drwells/gmsh-codim-1
Wolfgang Bangerth [Tue, 6 Jun 2023 03:41:44 +0000 (21:41 -0600)]
Merge pull request #15307 from drwells/gmsh-codim-1

Fix dim = 1 mesh loading with gmsh.

15 months agoMerge pull request #15311 from drwells/fix-ifdef-comment
Marc Fehling [Tue, 6 Jun 2023 03:40:24 +0000 (21:40 -0600)]
Merge pull request #15311 from drwells/fix-ifdef-comment

Fix a comment at the end of an ifdef.

15 months agoMerge pull request #15312 from marcfehling/muparser-isfinite
Wolfgang Bangerth [Tue, 6 Jun 2023 03:36:27 +0000 (21:36 -0600)]
Merge pull request #15312 from marcfehling/muparser-isfinite

Hotfix muparser: Fix problem with IntelLLVM finite math

15 months agoUse numbers::is_finite whenever we compare with infinity. 15314/head
Marc Fehling [Tue, 6 Jun 2023 02:43:16 +0000 (20:43 -0600)]
Use numbers::is_finite whenever we compare with infinity.

15 months agoTry making MSVC happy
Daniel Arndt [Tue, 6 Jun 2023 00:23:56 +0000 (20:23 -0400)]
Try making MSVC happy

15 months agoHotfix muparser: Fix problem with IntelLLVM finite math 15312/head
Marc Fehling [Mon, 5 Jun 2023 21:45:21 +0000 (15:45 -0600)]
Hotfix muparser: Fix problem with IntelLLVM finite math

15 months agoBe systematic in how we name arguments of FEValues member functions. 15313/head
Wolfgang Bangerth [Mon, 5 Jun 2023 23:08:17 +0000 (17:08 -0600)]
Be systematic in how we name arguments of FEValues member functions.

15 months agoFix a comment at the end of an ifdef. 15311/head
David Wells [Mon, 5 Jun 2023 19:39:17 +0000 (15:39 -0400)]
Fix a comment at the end of an ifdef.

15 months agoAvoid a couple compiler warnings
Daniel Arndt [Mon, 5 Jun 2023 15:18:04 +0000 (11:18 -0400)]
Avoid a couple compiler warnings

15 months agoFix dim = 1 mesh loading with gmsh. 15307/head
David Wells [Mon, 5 Jun 2023 18:27:23 +0000 (14:27 -0400)]
Fix dim = 1 mesh loading with gmsh.

15 months agoTest icpx instead of icpc
Daniel Arndt [Mon, 5 Jun 2023 13:29:49 +0000 (09:29 -0400)]
Test icpx instead of icpc

15 months agoMerge pull request #15299 from bangerth/reference
Timo Heister [Sun, 4 Jun 2023 19:29:09 +0000 (15:29 -0400)]
Merge pull request #15299 from bangerth/reference

Avoid taking references on temporaries.

15 months agoMerge pull request #15300 from marcfehling/fix-test
Peter Munch [Sun, 4 Jun 2023 18:19:17 +0000 (20:19 +0200)]
Merge pull request #15300 from marcfehling/fix-test

Fix matrix_free test.

15 months agoFix matrix_free test. 15300/head
Marc Fehling [Sun, 4 Jun 2023 03:15:15 +0000 (21:15 -0600)]
Fix matrix_free test.

15 months agoAvoid taking references on temporaries. 15299/head
Wolfgang Bangerth [Sun, 4 Jun 2023 02:46:29 +0000 (20:46 -0600)]
Avoid taking references on temporaries.

15 months agoMerge pull request #15218 from drwells/distance-to-unit-cell
Wolfgang Bangerth [Sun, 4 Jun 2023 02:09:20 +0000 (20:09 -0600)]
Merge pull request #15218 from drwells/distance-to-unit-cell

Add a function for projecting points onto reference cells.

15 months agoMerge pull request #15296 from drwells/snes-p4est
Wolfgang Bangerth [Sun, 4 Jun 2023 01:24:09 +0000 (19:24 -0600)]
Merge pull request #15296 from drwells/snes-p4est

Mark two tests as dependent on p4est.

15 months agoMark two tests as dependent on p4est. 15296/head
David Wells [Sat, 3 Jun 2023 16:51:12 +0000 (12:51 -0400)]
Mark two tests as dependent on p4est.

15 months agoAdd a function for projecting points onto reference cells. 15218/head
David Wells [Mon, 15 May 2023 16:36:25 +0000 (12:36 -0400)]
Add a function for projecting points onto reference cells.

This can replace GeometryInfo::distance_to_unit_cell() and
GeometryInfo::project_to_unit_cell() in most circumstances.

There is no clear way to define the infinity norm for sloped surfaces (like the
top face of a tetrahedron), so this new function uses the Euclidean norm.

15 months agoMerge pull request #14595 from marcfehling/blockvector-reinit
Martin Kronbichler [Sat, 3 Jun 2023 06:06:00 +0000 (08:06 +0200)]
Merge pull request #14595 from marcfehling/blockvector-reinit

Added reinit(partitioners) to LA::distributed::BlockVector.

15 months agoMerge pull request #15273 from bergbauer/evaluate_integrate_values
Martin Kronbichler [Fri, 2 Jun 2023 10:40:29 +0000 (12:40 +0200)]
Merge pull request #15273 from bergbauer/evaluate_integrate_values

Tensor product kernels: Evaluate integrate values only

15 months agoMerge pull request #14346 from peterrum/process_dofs_vectorized_transpose_constant_offset
Martin Kronbichler [Fri, 2 Jun 2023 10:39:55 +0000 (12:39 +0200)]
Merge pull request #14346 from peterrum/process_dofs_vectorized_transpose_constant_offset

Add process_dofs_vectorized_transpose() variants with constant_offset

15 months agoMerge pull request #15294 from drwells/aspect-ratio-lapack
Martin Kronbichler [Fri, 2 Jun 2023 08:58:07 +0000 (10:58 +0200)]
Merge pull request #15294 from drwells/aspect-ratio-lapack

Document that compute_aspect_ratio_of_cells() requires LAPACK.

15 months agoAdd process_dofs_vectorized_transpose() variants with constant_offset 14346/head
Peter Munch [Mon, 10 Oct 2022 13:59:58 +0000 (15:59 +0200)]
Add process_dofs_vectorized_transpose() variants with constant_offset

15 months agoImplement path for values only 15273/head
Maximilian Bergbauer [Fri, 28 Apr 2023 12:35:01 +0000 (14:35 +0200)]
Implement path for values only

15 months agoUnify multiple copies of the same function. 15295/head
Wolfgang Bangerth [Thu, 1 Jun 2023 21:36:37 +0000 (15:36 -0600)]
Unify multiple copies of the same function.

15 months agoMerge pull request #15293 from drwells/wrap-petsc-lines
Wolfgang Bangerth [Thu, 1 Jun 2023 21:31:56 +0000 (15:31 -0600)]
Merge pull request #15293 from drwells/wrap-petsc-lines

Wrap some PETSc documentation lines.

15 months agoMerge pull request #15270 from Rombur/nvcc_warnings
Daniel Arndt [Thu, 1 Jun 2023 18:55:20 +0000 (14:55 -0400)]
Merge pull request #15270 from Rombur/nvcc_warnings

15 months agoDocument that compute_aspect_ratio_of_cells() requires LAPACK. 15294/head
David Wells [Thu, 1 Jun 2023 18:18:57 +0000 (14:18 -0400)]
Document that compute_aspect_ratio_of_cells() requires LAPACK.

15 months agoWrap some PETSc documentation lines. 15293/head
David Wells [Thu, 1 Jun 2023 18:10:43 +0000 (14:10 -0400)]
Wrap some PETSc documentation lines.

These are quite long and missing some HTML.

15 months agoMerge pull request #15281 from bergbauer/integrate_JxW
David Wells [Thu, 1 Jun 2023 17:19:37 +0000 (13:19 -0400)]
Merge pull request #15281 from bergbauer/integrate_JxW

FEPointEvaluation: Integrate should use JxW

15 months agoFix up generator expression 15283/head
Daniel Arndt [Thu, 1 Jun 2023 12:53:33 +0000 (12:53 +0000)]
Fix up generator expression

15 months agoAutomatically use JxW in integrate when available 15281/head
Maximilian Bergbauer [Fri, 26 May 2023 16:58:04 +0000 (18:58 +0200)]
Automatically use JxW in integrate when available

15 months agoMerge pull request #15287 from bergbauer/remove_update_JxW
Martin Kronbichler [Thu, 1 Jun 2023 11:44:00 +0000 (13:44 +0200)]
Merge pull request #15287 from bergbauer/remove_update_JxW

MappingFEField: Remove update_JxW_values for Piola transform

15 months agoMerge pull request #15289 from peterrum/apply_inverse_tmp_remove
Martin Kronbichler [Thu, 1 Jun 2023 11:41:52 +0000 (13:41 +0200)]
Merge pull request #15289 from peterrum/apply_inverse_tmp_remove

TensorProductMatrixSymmetricSum: small modifications

15 months agoMerge pull request #15288 from kronbichler/fix_mg_transfer
Peter Munch [Thu, 1 Jun 2023 10:53:21 +0000 (12:53 +0200)]
Merge pull request #15288 from kronbichler/fix_mg_transfer

MGTwoLevelTransfer: Clean old vector content in prolongate_add

15 months agoMerge pull request #15291 from bangerth/changelog
Luca Heltai [Thu, 1 Jun 2023 07:47:52 +0000 (09:47 +0200)]
Merge pull request #15291 from bangerth/changelog

Add changelog entry.

15 months agoUpdate test output 15288/head
Peter Munch [Thu, 1 Jun 2023 07:07:47 +0000 (09:07 +0200)]
Update test output

15 months agoAdd a shim for std::clamp().
David Wells [Thu, 1 Jun 2023 03:59:47 +0000 (23:59 -0400)]
Add a shim for std::clamp().

15 months agoAdd changelog entry. 15291/head
Wolfgang Bangerth [Wed, 31 May 2023 23:15:55 +0000 (17:15 -0600)]
Add changelog entry.

15 months agoMerge pull request #15290 from masterleinad/add_citation_bib
Marc Fehling [Wed, 31 May 2023 22:28:48 +0000 (16:28 -0600)]
Merge pull request #15290 from masterleinad/add_citation_bib

Add CITATIONS.bib file to suggest citation in GitHub

15 months agoMerge pull request #15217 from kronbichler/generalize_interfaces
Peter Munch [Wed, 31 May 2023 22:24:59 +0000 (00:24 +0200)]
Merge pull request #15217 from kronbichler/generalize_interfaces

Make MatrixFree evaluation kernels more flexible w.r.t. number type

15 months agoFix tests 15287/head
Maximilian Bergbauer [Wed, 31 May 2023 21:06:38 +0000 (23:06 +0200)]
Fix tests

15 months agoDrop 9.3 release 15290/head
Daniel Arndt [Wed, 31 May 2023 20:54:36 +0000 (16:54 -0400)]
Drop 9.3 release

15 months agoFix reviewer's comments 15270/head
Bruno Turcksin [Wed, 31 May 2023 01:05:54 +0000 (01:05 +0000)]
Fix reviewer's comments

15 months agoFix warnings when compiling with nvcc
Bruno Turcksin [Thu, 25 May 2023 20:48:20 +0000 (20:48 +0000)]
Fix warnings when compiling with nvcc


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