]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
7 years agoimprove documentation of Functions::StokesLSingularity 4671/head
Timo Heister [Thu, 27 Jul 2017 18:17:14 +0000 (14:17 -0400)]
improve documentation of Functions::StokesLSingularity

7 years agoMerge pull request #4659 from drwells/fix-mapping-q1
Jean-Paul Pelteret [Thu, 27 Jul 2017 07:44:12 +0000 (09:44 +0200)]
Merge pull request #4659 from drwells/fix-mapping-q1

Fix mapping q1

7 years agoDescribe the changes in a test and changelog entry. 4659/head
David Wells [Tue, 25 Jul 2017 23:20:44 +0000 (19:20 -0400)]
Describe the changes in a test and changelog entry.

7 years agoMerge pull request #4657 from masterleinad/alternative_pattern
Martin Kronbichler [Wed, 26 Jul 2017 07:31:05 +0000 (09:31 +0200)]
Merge pull request #4657 from masterleinad/alternative_pattern

Add alternative output for pattern_tools_06/07

7 years agoMark some quantities in transform_real_to_unit_cell as long double.
David Wells [Tue, 25 Jul 2017 21:46:13 +0000 (17:46 -0400)]
Mark some quantities in transform_real_to_unit_cell as long double.

This improves accuracy but incurs a modest (about 20%) slowdown. Using the exact
formula here instead of the Newton scheme (that we use for MappingQGeneric)
results in a 40x speed up anyway, so this is relatively small.

7 years agoRearrange the MappingQ1 quadratic equation solver.
David Wells [Tue, 25 Jul 2017 21:44:25 +0000 (17:44 -0400)]
Rearrange the MappingQ1 quadratic equation solver.

This gets around an issue where, for parallelograms, a should be zero: the
previous version did not handle this correctly.

7 years agoAdd alternative output for pattern_tools_06/07 4657/head
Daniel Arndt [Tue, 25 Jul 2017 14:06:42 +0000 (16:06 +0200)]
Add alternative output for pattern_tools_06/07

7 years agoMerge pull request #4655 from nfehn/master
Timo Heister [Tue, 25 Jul 2017 13:24:41 +0000 (09:24 -0400)]
Merge pull request #4655 from nfehn/master

Improvement of initialization of Chebyshev smoother.

7 years agoentry in /doc/news/changes/minor/ added 4655/head
Niklas Fehn [Tue, 25 Jul 2017 11:53:23 +0000 (13:53 +0200)]
entry in /doc/news/changes/minor/ added

7 years agoImprovement of initialization of Chebyshev smoother.
Niklas Fehn [Tue, 25 Jul 2017 11:33:36 +0000 (13:33 +0200)]
Improvement of initialization of Chebyshev smoother.

Make initial guess robust with respect to number of processors by operating on the global index.

7 years agoMerge pull request #4651 from gassmoeller/fix_zero_dim_output
Wolfgang Bangerth [Tue, 25 Jul 2017 07:57:43 +0000 (01:57 -0600)]
Merge pull request #4651 from gassmoeller/fix_zero_dim_output

Fix some minor bugs in #4628

7 years agoMerge pull request #4653 from kronbichler/fix_unity_build_with_clang_3.5
Wolfgang Bangerth [Tue, 25 Jul 2017 07:55:26 +0000 (01:55 -0600)]
Merge pull request #4653 from kronbichler/fix_unity_build_with_clang_3.5

Fix unity build with clang-3.5.

7 years agoFix unity build with clang-3.5. 4653/head
Martin Kronbichler [Tue, 25 Jul 2017 06:40:35 +0000 (08:40 +0200)]
Fix unity build with clang-3.5.

7 years agoMerge pull request #4652 from masterleinad/fix_compilation_without_p4est
Martin Kronbichler [Tue, 25 Jul 2017 06:13:41 +0000 (08:13 +0200)]
Merge pull request #4652 from masterleinad/fix_compilation_without_p4est

Fix compilation without p4est

7 years agoMerge pull request #4650 from masterleinad/fix_warning_geometryinfo
Jean-Paul Pelteret [Tue, 25 Jul 2017 05:45:09 +0000 (07:45 +0200)]
Merge pull request #4650 from masterleinad/fix_warning_geometryinfo

Fix warning about instantiation of GeometryInfo<0>

7 years agoFix compilation without p4est 4652/head
Daniel Arndt [Mon, 24 Jul 2017 22:20:07 +0000 (00:20 +0200)]
Fix compilation without p4est

7 years agoFix some minor bugs 4651/head
Rene Gassmoeller [Mon, 24 Jul 2017 22:17:15 +0000 (16:17 -0600)]
Fix some minor bugs

7 years agoFix warning about instantiation of GeometryInfo<0> 4650/head
Daniel Arndt [Mon, 24 Jul 2017 22:02:49 +0000 (00:02 +0200)]
Fix warning about instantiation of GeometryInfo<0>

7 years agoMerge pull request #4442 from drwells/manual-unity
Matthias Maier [Mon, 24 Jul 2017 18:31:23 +0000 (13:31 -0500)]
Merge pull request #4442 from drwells/manual-unity

Manual unity

7 years agoMerge pull request #4645 from bangerth/constraint-matrix-copy
David Wells [Mon, 24 Jul 2017 16:06:55 +0000 (12:06 -0400)]
Merge pull request #4645 from bangerth/constraint-matrix-copy

Implement a ConstraintMatrix::copy_from() function.

7 years agoMerge pull request #4648 from drwells/add-p4est-zlib-check
Martin Kronbichler [Mon, 24 Jul 2017 14:54:28 +0000 (16:54 +0200)]
Merge pull request #4648 from drwells/add-p4est-zlib-check

Fail to install p4est if it is not compiled with zlib.

7 years agoFail to install p4est if it is not compiled with zlib. 4648/head
David Wells [Sun, 23 Jul 2017 21:02:38 +0000 (17:02 -0400)]
Fail to install p4est if it is not compiled with zlib.

7 years agoMerge pull request #4649 from simonsticko/disable_warning_immersed_surface_quad
Martin Kronbichler [Mon, 24 Jul 2017 10:40:34 +0000 (12:40 +0200)]
Merge pull request #4649 from simonsticko/disable_warning_immersed_surface_quad

Remove a compiler warning in ImmersedSurfaceQuadrature.

7 years agoRemove a compiler warning in ImmersedSurfaceQuadrature. 4649/head
Simon Sticko [Mon, 24 Jul 2017 09:22:13 +0000 (11:22 +0200)]
Remove a compiler warning in ImmersedSurfaceQuadrature.

7 years agoUpdate the documentation on CMakeLists.txt files. 4442/head
David Wells [Sun, 23 Jul 2017 18:05:33 +0000 (14:05 -0400)]
Update the documentation on CMakeLists.txt files.

7 years agoAdd an option for a unity build.
David Wells [Sun, 16 Jul 2017 12:50:05 +0000 (08:50 -0400)]
Add an option for a unity build.

7 years agoAdd another FE namespace fix.
David Wells [Sun, 16 Jul 2017 17:33:38 +0000 (13:33 -0400)]
Add another FE namespace fix.

7 years agoMerge pull request #4632 from luca-heltai/pattern-tools
Wolfgang Bangerth [Sun, 23 Jul 2017 20:08:31 +0000 (14:08 -0600)]
Merge pull request #4632 from luca-heltai/pattern-tools

PatternsTools namespace.

7 years agoMerge pull request #4305 from simonsticko/immersed_surface_quadrature
Wolfgang Bangerth [Sun, 23 Jul 2017 20:06:21 +0000 (14:06 -0600)]
Merge pull request #4305 from simonsticko/immersed_surface_quadrature

Add class ImmersedSurfaceQuadrature

7 years agoMerge pull request #4646 from drwells/add-default-prm-note
Wolfgang Bangerth [Sun, 23 Jul 2017 20:03:07 +0000 (14:03 -0600)]
Merge pull request #4646 from drwells/add-default-prm-note

Add a note on generating default parameter files.

7 years agoMerge pull request #4647 from bangerth/doc-update
David Wells [Sun, 23 Jul 2017 17:27:40 +0000 (13:27 -0400)]
Merge pull request #4647 from bangerth/doc-update

Minor doc updates to a couple of classes.

7 years agoAdd a note on generating default parameter files. 4646/head
David Wells [Sat, 22 Jul 2017 23:32:04 +0000 (19:32 -0400)]
Add a note on generating default parameter files.

A since-removed equivalent to parse_input (see commit 8baf33d316b) took,
as an optional argument argument, a boolean that specified whether or
not parse_input should write a default parameter file if one is not
found. This commit summarizes that old documentation for users who want
the old behavior.

7 years agoMoved changelog to major. 4632/head
Luca Heltai [Sun, 23 Jul 2017 14:31:19 +0000 (16:31 +0200)]
Moved changelog to major.

7 years agoSpecialise Bool pattern.
Luca Heltai [Fri, 21 Jul 2017 11:01:08 +0000 (13:01 +0200)]
Specialise Bool pattern.

7 years agoFixed naming of is_stl_container and is_stl_map
Luca Heltai [Thu, 20 Jul 2017 20:39:59 +0000 (22:39 +0200)]
Fixed naming of is_stl_container and is_stl_map

7 years agochange log
Luca Heltai [Thu, 20 Jul 2017 18:00:05 +0000 (20:00 +0200)]
change log

7 years agoAdded add_parameter function and tests.
Luca Heltai [Thu, 20 Jul 2017 17:52:02 +0000 (19:52 +0200)]
Added add_parameter function and tests.

7 years agoMoved pattern_tools.h inside patterns.h
Luca Heltai [Thu, 20 Jul 2017 17:07:43 +0000 (19:07 +0200)]
Moved pattern_tools.h inside patterns.h

7 years agoMoved Patterns namespace in its own file.
Luca Heltai [Thu, 20 Jul 2017 16:37:57 +0000 (18:37 +0200)]
Moved Patterns namespace in its own file.

7 years agoSupport for std::pair
Luca Heltai [Thu, 20 Jul 2017 10:18:51 +0000 (12:18 +0200)]
Support for std::pair

7 years agoRenamed files to pattern_tools
Luca Heltai [Thu, 20 Jul 2017 09:47:44 +0000 (11:47 +0200)]
Renamed files to pattern_tools

7 years agoFixed support for arbitrary map types.
Luca Heltai [Thu, 20 Jul 2017 08:58:28 +0000 (10:58 +0200)]
Fixed support for arbitrary map types.

7 years agoRenamed namespace, fixed cxx14 dep, fixed stylistic comments.
Luca Heltai [Thu, 20 Jul 2017 08:08:14 +0000 (10:08 +0200)]
Renamed namespace, fixed cxx14 dep, fixed stylistic comments.

7 years agoAdded tests for several Convert<T> types.
Luca Heltai [Wed, 19 Jul 2017 19:35:03 +0000 (21:35 +0200)]
Added tests for several Convert<T> types.

7 years agoAdd Convert for string types.
Luca Heltai [Wed, 19 Jul 2017 19:23:41 +0000 (21:23 +0200)]
Add Convert for string types.

7 years agoAdded convert for std::complex types.
Luca Heltai [Wed, 19 Jul 2017 19:08:48 +0000 (21:08 +0200)]
Added convert for std::complex types.

7 years agoAdded tensor and point types.
Luca Heltai [Wed, 19 Jul 2017 18:56:00 +0000 (20:56 +0200)]
Added tensor and point types.

Moved some functions to internal namespaces.

7 years agoRemoved patterns_tools.cc and refactored add_parameter
Luca Heltai [Wed, 19 Jul 2017 18:53:48 +0000 (20:53 +0200)]
Removed patterns_tools.cc and refactored  add_parameter

7 years agoMade all stl containers and map available.
Luca Heltai [Tue, 18 Jul 2017 20:22:52 +0000 (22:22 +0200)]
Made all stl containers and map available.

7 years agoSpecialization of Convert for Map types.
Luca Heltai [Tue, 18 Jul 2017 19:04:24 +0000 (21:04 +0200)]
Specialization of Convert for Map types.

7 years agoAdded getters to Patterns::Map
Luca Heltai [Tue, 18 Jul 2017 19:03:13 +0000 (21:03 +0200)]
Added getters to Patterns::Map

7 years agoPatterns for arithmetic types and container types.
Luca Heltai [Tue, 18 Jul 2017 18:15:12 +0000 (20:15 +0200)]
Patterns for arithmetic types and container types.

7 years agoAdded Convert struct, with its specialisation for integral types
Luca Heltai [Tue, 18 Jul 2017 17:09:37 +0000 (19:09 +0200)]
Added Convert struct, with its specialisation for integral types

7 years agoAdded getters for Patterns::List
Luca Heltai [Tue, 18 Jul 2017 17:05:45 +0000 (19:05 +0200)]
Added getters for Patterns::List

7 years agoMinor doc updates to a couple of classes. 4647/head
Wolfgang Bangerth [Sun, 23 Jul 2017 07:09:08 +0000 (01:09 -0600)]
Minor doc updates to a couple of classes.

7 years agoMerge pull request #4644 from bangerth/doc-update
Jean-Paul Pelteret [Sat, 22 Jul 2017 20:48:07 +0000 (22:48 +0200)]
Merge pull request #4644 from bangerth/doc-update

Better document the extract_subvector_to() functions.

7 years agoExplicitly =delete ConstraintMatrix::operator=(). 4645/head
Wolfgang Bangerth [Sat, 22 Jul 2017 20:31:09 +0000 (14:31 -0600)]
Explicitly =delete ConstraintMatrix::operator=().

Currently, it was just made 'private' and not implemented.

7 years agoAdd a changelog entry.
Wolfgang Bangerth [Sat, 22 Jul 2017 20:29:54 +0000 (14:29 -0600)]
Add a changelog entry.

7 years agoAdd a test.
Wolfgang Bangerth [Sat, 22 Jul 2017 20:29:46 +0000 (14:29 -0600)]
Add a test.

7 years agoImplement a ConstraintMatrix::copy_from() function.
Wolfgang Bangerth [Sat, 22 Jul 2017 20:28:39 +0000 (14:28 -0600)]
Implement a ConstraintMatrix::copy_from() function.

7 years agoBetter document the extract_subvector_to() functions. 4644/head
Wolfgang Bangerth [Sat, 22 Jul 2017 19:42:12 +0000 (13:42 -0600)]
Better document the extract_subvector_to() functions.

This commit deals with the variant of the function that takes iterators.

7 years agoBetter document the extract_subvector_to() functions.
Wolfgang Bangerth [Sat, 22 Jul 2017 19:33:50 +0000 (13:33 -0600)]
Better document the extract_subvector_to() functions.

This commit deals with the variant of the function that takes vectors.

7 years agoMerge pull request #4628 from gassmoeller/allow_zero_dim_output
Wolfgang Bangerth [Sat, 22 Jul 2017 04:33:36 +0000 (22:33 -0600)]
Merge pull request #4628 from gassmoeller/allow_zero_dim_output

Allow zero dimensional output in DataOutBase

7 years agoAdd instantiations 4628/head
Rene Gassmoeller [Sat, 22 Jul 2017 00:03:17 +0000 (18:03 -0600)]
Add instantiations

7 years agoMerge pull request #4640 from kronbichler/fix_mg_ghost_periodic
Wolfgang Bangerth [Fri, 21 Jul 2017 22:46:37 +0000 (16:46 -0600)]
Merge pull request #4640 from kronbichler/fix_mg_ghost_periodic

Fix ghost layer with multigrid hierarchy for distributed triangulation

7 years agoMerge pull request #4636 from bangerth/dofhandler-update
Bruno Turcksin [Fri, 21 Jul 2017 21:27:30 +0000 (17:27 -0400)]
Merge pull request #4636 from bangerth/dofhandler-update

More Dofhandler updates

7 years agoInstantiate output for zero dim.
Rene Gassmoeller [Tue, 18 Jul 2017 17:04:51 +0000 (11:04 -0600)]
Instantiate output for zero dim.

7 years agoAddress a couple of review comments. 4636/head
Wolfgang Bangerth [Fri, 21 Jul 2017 18:48:59 +0000 (12:48 -0600)]
Address a couple of review comments.

7 years agoStandardize on 'template <class DoFHandlerType>'.
Wolfgang Bangerth [Fri, 21 Jul 2017 18:42:49 +0000 (12:42 -0600)]
Standardize on 'template <class DoFHandlerType>'.

7 years agoMerge pull request #4641 from bangerth/make-var-const
David Wells [Thu, 20 Jul 2017 22:21:24 +0000 (18:21 -0400)]
Merge pull request #4641 from bangerth/make-var-const

Make a couple of variables 'const'.

7 years agoMake a couple of variables 'const'. 4641/head
Wolfgang Bangerth [Thu, 20 Jul 2017 20:46:01 +0000 (14:46 -0600)]
Make a couple of variables 'const'.

7 years agoAdd changelog. 4640/head
Martin Kronbichler [Thu, 20 Jul 2017 15:16:15 +0000 (17:16 +0200)]
Add changelog.

7 years agoAdd new test
Martin Kronbichler [Thu, 20 Jul 2017 15:14:16 +0000 (17:14 +0200)]
Add new test

7 years agoFix bug in MG ghost layer computation leading to dead locks.
Martin Kronbichler [Thu, 20 Jul 2017 15:14:01 +0000 (17:14 +0200)]
Fix bug in MG ghost layer computation leading to dead locks.

7 years agoMerge pull request #4637 from bangerth/fix-serialization
Daniel Arndt [Thu, 20 Jul 2017 16:40:50 +0000 (18:40 +0200)]
Merge pull request #4637 from bangerth/fix-serialization

Fix serialization of DoFHandler.

7 years agoAdd class ImmersedSurfaceQuadrature 4305/head
Simon Sticko [Mon, 24 Apr 2017 17:49:04 +0000 (19:49 +0200)]
Add class ImmersedSurfaceQuadrature

Add a class representing an quadrature rule over a surface cutting arbitrary
through the unit cell. In order to map a quadrature rule over a surface from
the unit cell to physical space it is not sufficient to know only points and
scalar weights, since information about the normal is also required. In
addition to points and weights this class also stores the normal vectors.

7 years agoMerge pull request #4634 from bangerth/simplify-code
Bruno Turcksin [Thu, 20 Jul 2017 01:36:20 +0000 (21:36 -0400)]
Merge pull request #4634 from bangerth/simplify-code

Simplify a small piece of code.

7 years agoMerge pull request #4631 from bangerth/delete-copy-operators
Bruno Turcksin [Thu, 20 Jul 2017 01:35:33 +0000 (21:35 -0400)]
Merge pull request #4631 from bangerth/delete-copy-operators

Mark copy operators as explicitly deleted.

7 years agoMerge pull request #4635 from bangerth/simplify-test
Daniel Arndt [Wed, 19 Jul 2017 23:27:15 +0000 (01:27 +0200)]
Merge pull request #4635 from bangerth/simplify-test

Remove an unnecessary cast.

7 years agoCompress buffers before communicating.
Wolfgang Bangerth [Wed, 19 Jul 2017 18:58:51 +0000 (12:58 -0600)]
Compress buffers before communicating.

This has already been done in distribute_dofs(). Also do it in renumber_dofs().

7 years agoSubstantially simplify the creation of the NumberCache.
Wolfgang Bangerth [Wed, 19 Jul 2017 18:48:36 +0000 (12:48 -0600)]
Substantially simplify the creation of the NumberCache.

This uses a recently introduced constructor of NumberCache.

7 years agoMake two blocks of code the same.
Wolfgang Bangerth [Wed, 19 Jul 2017 18:48:09 +0000 (12:48 -0600)]
Make two blocks of code the same.

One part of the renumber_dofs() algorithm in parallel is exactly the
same as in the distribute_dofs() algorithm, so use the same code in
both places.

7 years agoSimplify the implementation of an algorithm slightly.
Wolfgang Bangerth [Wed, 19 Jul 2017 18:06:30 +0000 (12:06 -0600)]
Simplify the implementation of an algorithm slightly.

Also make it cheaper: We really only need to loop over ghost cells,
but not locally owned cells.

7 years agoRename a variable.
Wolfgang Bangerth [Wed, 19 Jul 2017 18:01:57 +0000 (12:01 -0600)]
Rename a variable.

7 years agoSimplify an algorithm.
Wolfgang Bangerth [Wed, 19 Jul 2017 18:01:50 +0000 (12:01 -0600)]
Simplify an algorithm.

We were trying hard to construct an IndexSet efficiently, but IndexSet
can now do that itself provided we give it a sorted set of indices.

7 years agoMore DoFHandler policy cleanups.
Wolfgang Bangerth [Wed, 19 Jul 2017 16:55:01 +0000 (10:55 -0600)]
More DoFHandler policy cleanups.

Specifically, make function names more uniform. Also some control
flow cleanups, and other minor improvements.

7 years agoInstantiate the ParallelDistributed policy for hp::DoFHandler.
Wolfgang Bangerth [Wed, 19 Jul 2017 02:48:16 +0000 (20:48 -0600)]
Instantiate the ParallelDistributed policy for hp::DoFHandler.

7 years agoFix serialization of DoFHandler. 4637/head
Wolfgang Bangerth [Wed, 19 Jul 2017 21:35:57 +0000 (15:35 -0600)]
Fix serialization of DoFHandler.

Some gcc/boost combinations have trouble re-creating vectors of
std::unique_ptr objects because the latter has no copy constructor.
Work around this by doing things one element at a time.

7 years agoMark copy operators as explicitly deleted. 4631/head
Wolfgang Bangerth [Wed, 19 Jul 2017 16:53:46 +0000 (10:53 -0600)]
Mark copy operators as explicitly deleted.

The operator=() of all accessor classes had previously been hidden
by making them private and not implementing them. C++11 now allows
us to bring them out of the dark and into the light by making
them public, but marking them as '=delete'.

7 years agoRemove an unnecessary cast. 4635/head
Wolfgang Bangerth [Wed, 19 Jul 2017 18:06:01 +0000 (12:06 -0600)]
Remove an unnecessary cast.

7 years agoSimplify a small piece of code. 4634/head
Wolfgang Bangerth [Wed, 19 Jul 2017 18:58:21 +0000 (12:58 -0600)]
Simplify a small piece of code.

7 years agoMerge pull request #4633 from tjhei/doc_loop_control
Wolfgang Bangerth [Wed, 19 Jul 2017 20:16:38 +0000 (14:16 -0600)]
Merge pull request #4633 from tjhei/doc_loop_control

improve LoopControl documentation

7 years agoimprove LoopControl documentation 4633/head
Timo Heister [Wed, 19 Jul 2017 20:11:41 +0000 (16:11 -0400)]
improve LoopControl documentation

7 years agoMerge pull request #4630 from masterleinad/replace_deprecated_table_indices_constructor
David Wells [Wed, 19 Jul 2017 19:23:59 +0000 (15:23 -0400)]
Merge pull request #4630 from masterleinad/replace_deprecated_table_indices_constructor

Replace calls to deprecated TableIndices constructor

7 years agoReplace calls to deprecated TableIndices constructor 4630/head
Daniel Arndt [Wed, 19 Jul 2017 14:45:02 +0000 (16:45 +0200)]
Replace calls to deprecated TableIndices constructor

7 years agoMerge pull request #4629 from masterleinad/fix_construct_chebyshev
Wolfgang Bangerth [Wed, 19 Jul 2017 13:12:58 +0000 (07:12 -0600)]
Merge pull request #4629 from masterleinad/fix_construct_chebyshev

Use appropriate constructor for QGaussChebyshev*

7 years agoUse appropriate constructor for QGaussChebyshev* 4629/head
Daniel Arndt [Wed, 19 Jul 2017 11:15:01 +0000 (13:15 +0200)]
Use appropriate constructor for QGaussChebyshev*

7 years agoMerge pull request #4624 from bangerth/dofhandler-update
Bruno Turcksin [Wed, 19 Jul 2017 01:59:26 +0000 (21:59 -0400)]
Merge pull request #4624 from bangerth/dofhandler-update

DoFHandler policy update

7 years agoSimplify an assertion. 4624/head
Wolfgang Bangerth [Wed, 19 Jul 2017 00:36:08 +0000 (18:36 -0600)]
Simplify an assertion.

7 years agoMore small cleanups.
Wolfgang Bangerth [Tue, 18 Jul 2017 23:48:50 +0000 (17:48 -0600)]
More small cleanups.

Most documentation changes, renaming of variables, and general housekeeping.


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