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kanschat [Sat, 25 May 2013 08:58:22 +0000 (08:58 +0000)]

fix new test

git-svn-id: https://svn.dealii.org/trunk@29591 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Sat, 25 May 2013 08:53:53 +0000 (08:53 +0000)]

remove misleading comment

git-svn-id: https://svn.dealii.org/trunk@29590 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Sat, 25 May 2013 08:50:25 +0000 (08:50 +0000)]

debug output for MGTransferPrebuilt
remove deprecated function call in mg_block_smoother.h

git-svn-id: https://svn.dealii.org/trunk@29589 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Sat, 25 May 2013 08:49:29 +0000 (08:49 +0000)]

cleanup test

git-svn-id: https://svn.dealii.org/trunk@29588 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Sat, 25 May 2013 08:48:01 +0000 (08:48 +0000)]

and some more MG bugs from yesterday

git-svn-id: https://svn.dealii.org/trunk@29587 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Sat, 25 May 2013 08:24:07 +0000 (08:24 +0000)]

add failing test

git-svn-id: https://svn.dealii.org/trunk@29586 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Sat, 25 May 2013 08:23:31 +0000 (08:23 +0000)]

Fix a stupid deadlock.

git-svn-id: https://svn.dealii.org/trunk@29585 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Sat, 25 May 2013 08:22:36 +0000 (08:22 +0000)]

fix stuff I broke yesterday

git-svn-id: https://svn.dealii.org/trunk@29584 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Sat, 25 May 2013 08:12:39 +0000 (08:12 +0000)]

remove deprecated warninngs and prepare a new test
still waiting for boundary lists to be fixed

git-svn-id: https://svn.dealii.org/trunk@29583 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Sat, 25 May 2013 07:49:44 +0000 (07:49 +0000)]

Use locks only when modifying entries, not whenever accessing through get_prolongation_matrix

git-svn-id: https://svn.dealii.org/trunk@29582 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Sat, 25 May 2013 07:27:26 +0000 (07:27 +0000)]

prepare transfer for Trilinos matrices

git-svn-id: https://svn.dealii.org/trunk@29581 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 24 May 2013 19:19:35 +0000 (19:19 +0000)]

New test.

git-svn-id: https://svn.dealii.org/trunk@29580 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 24 May 2013 19:18:52 +0000 (19:18 +0000)]

Can't call vec.l1_norm() if not on all processors.

git-svn-id: https://svn.dealii.org/trunk@29579 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 24 May 2013 19:02:27 +0000 (19:02 +0000)]

Add locally_owned_elements() to all vector classes.

git-svn-id: https://svn.dealii.org/trunk@29578 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 24 May 2013 18:59:19 +0000 (18:59 +0000)]

Add complete_index_set().

git-svn-id: https://svn.dealii.org/trunk@29577 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Fri, 24 May 2013 18:43:56 +0000 (18:43 +0000)]

Fix locks.

git-svn-id: https://svn.dealii.org/trunk@29576 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Fri, 24 May 2013 16:22:37 +0000 (16:22 +0000)]

output all levels
allow for negative subdomains
simplify some redundant expressions

git-svn-id: https://svn.dealii.org/trunk@29575 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 24 May 2013 16:11:47 +0000 (16:11 +0000)]

ignore non local cells in mg*

git-svn-id: https://svn.dealii.org/trunk@29574 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Fri, 24 May 2013 15:46:18 +0000 (15:46 +0000)]

Avoid warning about possibly uninitialized variables.

git-svn-id: https://svn.dealii.org/trunk@29573 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 24 May 2013 14:19:53 +0000 (14:19 +0000)]

remove debug output

git-svn-id: https://svn.dealii.org/trunk@29572 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 24 May 2013 14:02:55 +0000 (14:02 +0000)]

fix bug in distribute mg dofs in parallel

git-svn-id: https://svn.dealii.org/trunk@29571 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 24 May 2013 13:55:20 +0000 (13:55 +0000)]

step-50: add gridout

git-svn-id: https://svn.dealii.org/trunk@29570 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Fri, 24 May 2013 13:15:12 +0000 (13:15 +0000)]

Adjust output.

git-svn-id: https://svn.dealii.org/trunk@29569 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 24 May 2013 13:11:25 +0000 (13:11 +0000)]

simplify test

git-svn-id: https://svn.dealii.org/trunk@29568 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 24 May 2013 12:58:47 +0000 (12:58 +0000)]

update test

git-svn-id: https://svn.dealii.org/trunk@29567 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 24 May 2013 12:56:20 +0000 (12:56 +0000)]

add broken test

git-svn-id: https://svn.dealii.org/trunk@29566 0785d39b-7218-0410-832d-ea1e28bc413d

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koecher [Fri, 24 May 2013 12:52:52 +0000 (12:52 +0000)]

added some (void)i to avoid warnings in optimized mode to tria_accessor.templates.h

git-svn-id: https://svn.dealii.org/trunk@29565 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 24 May 2013 12:20:58 +0000 (12:20 +0000)]

give multigrid hint in step-50

git-svn-id: https://svn.dealii.org/trunk@29564 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 24 May 2013 12:18:17 +0000 (12:18 +0000)]

add comment

git-svn-id: https://svn.dealii.org/trunk@29563 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 24 May 2013 12:15:12 +0000 (12:15 +0000)]

add cmake stuff for step-50

git-svn-id: https://svn.dealii.org/trunk@29562 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Fri, 24 May 2013 09:53:12 +0000 (09:53 +0000)]

Initialize restriction and prolongation matrix in FESystem and FE_Q only upon request. This significantly reduces memory requirements for higher order elements as most of these matrices are never needed, e.g. anisotropic ones without anisotropic refinement.

git-svn-id: https://svn.dealii.org/trunk@29561 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 24 May 2013 05:04:17 +0000 (05:04 +0000)]

Provide Vector::supports_distributed_data for all vector classes.

git-svn-id: https://svn.dealii.org/trunk@29560 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 24 May 2013 04:30:55 +0000 (04:30 +0000)]

Move exception declaration out of function-local scope to a globally visible scope so that the class has external linkage as required by the standard.

git-svn-id: https://svn.dealii.org/trunk@29559 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 23 May 2013 19:19:51 +0000 (19:19 +0000)]

Implement ConstraintMatrix::distribute() in a different way. Adjust testcase.

git-svn-id: https://svn.dealii.org/trunk@29558 0785d39b-7218-0410-832d-ea1e28bc413d

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steigemann [Thu, 23 May 2013 10:44:49 +0000 (10:44 +0000)]

small fix in fe_tools.cc

git-svn-id: https://svn.dealii.org/trunk@29557 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Thu, 23 May 2013 09:36:13 +0000 (09:36 +0000)]

Mention change.

git-svn-id: https://svn.dealii.org/trunk@29556 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Thu, 23 May 2013 09:36:03 +0000 (09:36 +0000)]

Patch for FETools::back_interpolate for parallel::distributed::Vector by Martin Steigemann.

git-svn-id: https://svn.dealii.org/trunk@29555 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Wed, 22 May 2013 22:34:49 +0000 (22:34 +0000)]

One more.

git-svn-id: https://svn.dealii.org/trunk@29554 0785d39b-7218-0410-832d-ea1e28bc413d

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maier [Wed, 22 May 2013 20:36:34 +0000 (20:36 +0000)]

CMake: Rename configure_umfpack.cmake to configura_1_umfpack.cmake so that
it gets processed before configure_petsc.cmake

git-svn-id: https://svn.dealii.org/trunk@29553 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Wed, 22 May 2013 20:08:44 +0000 (20:08 +0000)]

Adjust output.

git-svn-id: https://svn.dealii.org/trunk@29552 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Wed, 22 May 2013 14:57:12 +0000 (14:57 +0000)]

Make compile without C++11.

git-svn-id: https://svn.dealii.org/trunk@29551 0785d39b-7218-0410-832d-ea1e28bc413d

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christian.wuelker [Wed, 22 May 2013 13:36:35 +0000 (13:36 +0000)]

Output adjusted to new version of GridOut::write_svg

git-svn-id: https://svn.dealii.org/trunk@29550 0785d39b-7218-0410-832d-ea1e28bc413d

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christian.wuelker [Wed, 22 May 2013 13:32:48 +0000 (13:32 +0000)]

added DataOutBase::write_svg.
GridOut::write_svg now provides a perspective view

git-svn-id: https://svn.dealii.org/trunk@29549 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Wed, 22 May 2013 06:27:29 +0000 (06:27 +0000)]

Improve documentation.

git-svn-id: https://svn.dealii.org/trunk@29548 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Wed, 22 May 2013 06:02:41 +0000 (06:02 +0000)]

Make compile without MPI.

git-svn-id: https://svn.dealii.org/trunk@29547 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Wed, 22 May 2013 05:49:37 +0000 (05:49 +0000)]

Adjust number of iterations due to new computation of eigenvalues in PreconditionChebyshev.

git-svn-id: https://svn.dealii.org/trunk@29546 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Wed, 22 May 2013 05:35:32 +0000 (05:35 +0000)]

Extend test to negative entries.

git-svn-id: https://svn.dealii.org/trunk@29545 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Wed, 22 May 2013 05:32:19 +0000 (05:32 +0000)]

Fix comparison with negative entries.

git-svn-id: https://svn.dealii.org/trunk@29544 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Wed, 22 May 2013 05:27:30 +0000 (05:27 +0000)]

Remove this file since it's unused, see bug report 57 at http://code.google.com/p/dealii/issues/detail?id=57.

git-svn-id: https://svn.dealii.org/trunk@29543 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Tue, 21 May 2013 16:47:31 +0000 (16:47 +0000)]

Improve inner products in parallel vector: Use only one MPI_Allreduce instead of n_blocks() many.

git-svn-id: https://svn.dealii.org/trunk@29542 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Tue, 21 May 2013 14:39:21 +0000 (14:39 +0000)]

Rename test to reflect the function it tests.

git-svn-id: https://svn.dealii.org/trunk@29541 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Tue, 21 May 2013 14:37:42 +0000 (14:37 +0000)]

Adjust output for change in r29539

git-svn-id: https://svn.dealii.org/trunk@29540 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Tue, 21 May 2013 14:30:26 +0000 (14:30 +0000)]

Use better max coarse size for Trilinos AMG preconditioner. The default (128) is way too small; a direct solver with not more than 2000 entries is very quick indeed.

git-svn-id: https://svn.dealii.org/trunk@29539 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Tue, 21 May 2013 14:29:36 +0000 (14:29 +0000)]

Use deal.II CG solver for initializing PreconditionChebyshev instead of implementing it again. Hook onto deallog for getting the eigenvalue estimates.

git-svn-id: https://svn.dealii.org/trunk@29538 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Tue, 21 May 2013 14:12:41 +0000 (14:12 +0000)]

Fix include files.

git-svn-id: https://svn.dealii.org/trunk@29537 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Tue, 21 May 2013 13:53:26 +0000 (13:53 +0000)]

Fix a few typos.

git-svn-id: https://svn.dealii.org/trunk@29536 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Tue, 21 May 2013 13:52:37 +0000 (13:52 +0000)]

Augment text.

git-svn-id: https://svn.dealii.org/trunk@29535 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Tue, 21 May 2013 13:34:04 +0000 (13:34 +0000)]

Fix bug in parallel::distributed::Vector::compress(VectorOperation::insert) pointed out by Martin Steigemann.

git-svn-id: https://svn.dealii.org/trunk@29534 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Tue, 21 May 2013 13:16:35 +0000 (13:16 +0000)]

Short circuit a test to make dof_tools_21 pass again.

git-svn-id: https://svn.dealii.org/trunk@29533 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Tue, 21 May 2013 12:30:22 +0000 (12:30 +0000)]

Add a test.

git-svn-id: https://svn.dealii.org/trunk@29532 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Tue, 21 May 2013 04:18:42 +0000 (04:18 +0000)]

Doh -- I need to learn to place my parentheses...

git-svn-id: https://svn.dealii.org/trunk@29531 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Tue, 21 May 2013 03:52:02 +0000 (03:52 +0000)]

Add a test. This doesn't currently work, but I'd like to continue debugging on a system where this is faster...

git-svn-id: https://svn.dealii.org/trunk@29530 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 20 May 2013 22:13:54 +0000 (22:13 +0000)]

Fix completely bogus way of including header files.

git-svn-id: https://svn.dealii.org/trunk@29529 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 20 May 2013 21:29:14 +0000 (21:29 +0000)]

Add an assertion.

git-svn-id: https://svn.dealii.org/trunk@29528 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 20 May 2013 16:08:45 +0000 (16:08 +0000)]

Add missing include file.

git-svn-id: https://svn.dealii.org/trunk@29527 0785d39b-7218-0410-832d-ea1e28bc413d

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maier [Mon, 20 May 2013 16:05:43 +0000 (16:05 +0000)]

Fixup two comments ;-)

git-svn-id: https://svn.dealii.org/trunk@29526 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 20 May 2013 14:08:26 +0000 (14:08 +0000)]

Make make_periodicity_constraints work with locally refined meshes as well.

git-svn-id: https://svn.dealii.org/trunk@29525 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Sat, 18 May 2013 12:49:17 +0000 (12:49 +0000)]

New test.

git-svn-id: https://svn.dealii.org/trunk@29524 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 17 May 2013 21:08:29 +0000 (21:08 +0000)]

Fix a couple of typos.

git-svn-id: https://svn.dealii.org/trunk@29523 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 17 May 2013 17:37:25 +0000 (17:37 +0000)]

More progress on periodic boundary conditions.

git-svn-id: https://svn.dealii.org/trunk@29522 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 16 May 2013 22:10:32 +0000 (22:10 +0000)]

Refactor a bit, in preparation to dealing with periodic faces not on
the same refinement level.

git-svn-id: https://svn.dealii.org/trunk@29521 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 16 May 2013 21:08:43 +0000 (21:08 +0000)]

Add standard file header.

git-svn-id: https://svn.dealii.org/trunk@29520 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 16 May 2013 12:44:16 +0000 (12:44 +0000)]

Move slightly forward.

git-svn-id: https://svn.dealii.org/trunk@29519 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Thu, 16 May 2013 07:13:12 +0000 (07:13 +0000)]

Fix warning

git-svn-id: https://svn.dealii.org/trunk@29518 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Thu, 16 May 2013 07:10:22 +0000 (07:10 +0000)]

Fix undefined references with Intel compiler.

git-svn-id: https://svn.dealii.org/trunk@29517 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Wed, 15 May 2013 08:21:03 +0000 (08:21 +0000)]

Simplify get_interpolation_matrix

git-svn-id: https://svn.dealii.org/trunk@29516 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Wed, 15 May 2013 06:46:27 +0000 (06:46 +0000)]

Fix clear function of MatrixFree

git-svn-id: https://svn.dealii.org/trunk@29515 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Wed, 15 May 2013 05:40:04 +0000 (05:40 +0000)]

Make compile with older compilers.

git-svn-id: https://svn.dealii.org/trunk@29514 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Tue, 14 May 2013 16:00:12 +0000 (16:00 +0000)]

Adjust output difference of the form 0.938/0.937 with exact value 0.9375 that is different due to change in FE_Q_Base (more specifically, polynomials of order 1-3 are now evaluated from tabulated coefficients and not product form for constraints, interpolation and restriction matrices). Also updated memory consumption as there is now an array less in FE_Q.

git-svn-id: https://svn.dealii.org/trunk@29513 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Tue, 14 May 2013 15:15:15 +0000 (15:15 +0000)]

Fix include file locations.

git-svn-id: https://svn.dealii.org/trunk@29512 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Tue, 14 May 2013 15:01:54 +0000 (15:01 +0000)]

Avoid running into an assertion for very high order.

git-svn-id: https://svn.dealii.org/trunk@29511 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Tue, 14 May 2013 14:29:26 +0000 (14:29 +0000)]

Undo accidental check-in.

git-svn-id: https://svn.dealii.org/trunk@29510 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Tue, 14 May 2013 14:28:25 +0000 (14:28 +0000)]

Make compile with older gcc.

git-svn-id: https://svn.dealii.org/trunk@29509 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Tue, 14 May 2013 14:13:36 +0000 (14:13 +0000)]

Update comment

git-svn-id: https://svn.dealii.org/trunk@29508 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Tue, 14 May 2013 14:11:09 +0000 (14:11 +0000)]

Implement FE_Q_iso_Q1 element, i.e., an element that consists of several Q1 elements but with internal degrees of (higher order) FE_Q.

git-svn-id: https://svn.dealii.org/trunk@29507 0785d39b-7218-0410-832d-ea1e28bc413d

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young [Tue, 14 May 2013 09:16:39 +0000 (09:16 +0000)]

handle SLEPc descriptions.

git-svn-id: https://svn.dealii.org/trunk@29506 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 13 May 2013 21:55:19 +0000 (21:55 +0000)]

Add a sentence to the documentation.

git-svn-id: https://svn.dealii.org/trunk@29505 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 13 May 2013 15:31:07 +0000 (15:31 +0000)]

Improve documentation somewhat.

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kronbichler [Mon, 13 May 2013 07:20:47 +0000 (07:20 +0000)]

Fix include files

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kronbichler [Mon, 13 May 2013 05:38:03 +0000 (05:38 +0000)]

Mention fix in ConvergenceTable.

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bangerth [Sun, 12 May 2013 21:37:12 +0000 (21:37 +0000)]

Implement writing time and cycle to VTU files.

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bangerth [Sun, 12 May 2013 21:16:05 +0000 (21:16 +0000)]

Implement writing time and cycle to VTK files. VTU format is still missing.

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bangerth [Sat, 11 May 2013 09:12:28 +0000 (09:12 +0000)]

Fix a bunch of misspellings of the name "Dirichlet".

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kronbichler [Fri, 10 May 2013 17:13:06 +0000 (17:13 +0000)]

Forgot new test output

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kronbichler [Fri, 10 May 2013 16:51:44 +0000 (16:51 +0000)]

Fix one more issue, augment documentation of new parameter.

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kronbichler [Fri, 10 May 2013 15:47:24 +0000 (15:47 +0000)]

Fix issue 28.

git-svn-id: https://svn.dealii.org/trunk@29496 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 10 May 2013 15:11:59 +0000 (15:11 +0000)]

Remove stray 'typename' keywords.

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young [Fri, 10 May 2013 12:50:18 +0000 (12:50 +0000)]

Remove one & comment one 1d-assertion.

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young [Fri, 10 May 2013 12:45:52 +0000 (12:45 +0000)]

Patch MathGL to output 3d grids.

git-svn-id: https://svn.dealii.org/trunk@29493 0785d39b-7218-0410-832d-ea1e28bc413d

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young [Fri, 10 May 2013 11:56:09 +0000 (11:56 +0000)]

Note to self about eigenpair logic...

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