]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
11 years agoFix http://code.google.com/p/dealii/issues/detail?id=82 by ignoring DoFs that are...
Wolfgang Bangerth [Sat, 17 Aug 2013 01:16:24 +0000 (01:16 +0000)]
Fix http://code.google.com/p/dealii/issues/detail?id=82 by ignoring DoFs that are already identity constrained to each other. Add testcase by David Emerson.

git-svn-id: https://svn.dealii.org/trunk@30328 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFix http://code.google.com/p/dealii/issues/detail?id=82 by ignoring DoFs that are...
Wolfgang Bangerth [Sat, 17 Aug 2013 01:16:04 +0000 (01:16 +0000)]
Fix http://code.google.com/p/dealii/issues/detail?id=82 by ignoring DoFs that are already identity constrained to each other.

git-svn-id: https://svn.dealii.org/trunk@30327 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoProvide ConstraintMatrix::are_identity_constrained()
Wolfgang Bangerth [Sat, 17 Aug 2013 01:14:52 +0000 (01:14 +0000)]
Provide ConstraintMatrix::are_identity_constrained()

git-svn-id: https://svn.dealii.org/trunk@30326 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoCMake: Some final changes:
Matthias Maier [Fri, 16 Aug 2013 22:38:21 +0000 (22:38 +0000)]
CMake: Some final changes:

  - Get the behaviour for BOOST_DIR right
  - Print out *_DIR variables in detailed.log as well

git-svn-id: https://svn.dealii.org/trunk@30325 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoCMake: Bugfix, use BOOST_ROOT instead of Boost_DIR.
Matthias Maier [Fri, 16 Aug 2013 22:28:37 +0000 (22:28 +0000)]
CMake: Bugfix, use BOOST_ROOT instead of Boost_DIR.

git-svn-id: https://svn.dealii.org/trunk@30324 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoCMake: Fix Boost versin numbers and BOOST_DIR
Matthias Maier [Fri, 16 Aug 2013 22:17:18 +0000 (22:17 +0000)]
CMake: Fix Boost versin numbers and BOOST_DIR

git-svn-id: https://svn.dealii.org/trunk@30323 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoCMake: Bugfix: Rename "POINT" by "PATCH"
Matthias Maier [Fri, 16 Aug 2013 21:55:24 +0000 (21:55 +0000)]
CMake: Bugfix: Rename "POINT" by "PATCH"

git-svn-id: https://svn.dealii.org/trunk@30322 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoCMake: Print version numbers into detailed.log
Matthias Maier [Fri, 16 Aug 2013 21:55:20 +0000 (21:55 +0000)]
CMake: Print version numbers into detailed.log

git-svn-id: https://svn.dealii.org/trunk@30321 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoCMake: Unify version variables
Matthias Maier [Fri, 16 Aug 2013 21:55:16 +0000 (21:55 +0000)]
CMake: Unify version variables

git-svn-id: https://svn.dealii.org/trunk@30320 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoCMake: Unify version variables
Matthias Maier [Fri, 16 Aug 2013 21:32:45 +0000 (21:32 +0000)]
CMake: Unify version variables

git-svn-id: https://svn.dealii.org/trunk@30319 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoCMake: FindP4EST.cmake now export VERSION numbers as well
Matthias Maier [Fri, 16 Aug 2013 21:23:01 +0000 (21:23 +0000)]
CMake: FindP4EST.cmake now export VERSION numbers as well

git-svn-id: https://svn.dealii.org/trunk@30318 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFix computation of column widths.
Wolfgang Bangerth [Thu, 15 Aug 2013 19:23:09 +0000 (19:23 +0000)]
Fix computation of column widths.

git-svn-id: https://svn.dealii.org/trunk@30317 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoPatch by Oleh Krehel: add org-mode as a possibility for TableHandler::write_text().
Wolfgang Bangerth [Thu, 15 Aug 2013 11:59:44 +0000 (11:59 +0000)]
Patch by Oleh Krehel: add org-mode as a possibility for TableHandler::write_text().

git-svn-id: https://svn.dealii.org/trunk@30316 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoPatch by Scott Miller (and testcases by me): Add scalar_product functions between...
Wolfgang Bangerth [Thu, 15 Aug 2013 02:52:42 +0000 (02:52 +0000)]
Patch by Scott Miller (and testcases by me): Add scalar_product functions between tensors.

git-svn-id: https://svn.dealii.org/trunk@30315 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoCMake: Reenable -O2 for intel-12* compilers. Set -no-ansi-alias unconditionally
Matthias Maier [Thu, 15 Aug 2013 02:31:47 +0000 (02:31 +0000)]
CMake: Reenable -O2 for intel-12* compilers. Set -no-ansi-alias unconditionally

git-svn-id: https://svn.dealii.org/trunk@30314 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoUse usual function argument arrangement.
Wolfgang Bangerth [Thu, 15 Aug 2013 02:05:15 +0000 (02:05 +0000)]
Use usual function argument arrangement.

git-svn-id: https://svn.dealii.org/trunk@30313 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoPatch by Juan Carlos Araujo Cabarcas: Relax an assertion.
Wolfgang Bangerth [Thu, 15 Aug 2013 01:55:08 +0000 (01:55 +0000)]
Patch by Juan Carlos Araujo Cabarcas: Relax an assertion.

git-svn-id: https://svn.dealii.org/trunk@30312 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoPatch by Armin Ghajar Jazi: Also instantiate MappingQEulerian for Trilinos vectors.
Wolfgang Bangerth [Thu, 15 Aug 2013 01:48:46 +0000 (01:48 +0000)]
Patch by Armin Ghajar Jazi: Also instantiate MappingQEulerian for Trilinos vectors.

git-svn-id: https://svn.dealii.org/trunk@30311 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoremove debug output
Timo Heister [Wed, 14 Aug 2013 18:36:07 +0000 (18:36 +0000)]
remove debug output

git-svn-id: https://svn.dealii.org/trunk@30310 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFix a bug in PreconditionIdentity.
Bruno Turcksin [Wed, 14 Aug 2013 15:52:05 +0000 (15:52 +0000)]
Fix a bug in PreconditionIdentity.

git-svn-id: https://svn.dealii.org/trunk@30309 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFix typo.
Wolfgang Bangerth [Wed, 14 Aug 2013 11:29:26 +0000 (11:29 +0000)]
Fix typo.

git-svn-id: https://svn.dealii.org/trunk@30308 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoPETSc/Trilinos BlockVectors now only allow assignment if destination is empty or...
Timo Heister [Tue, 13 Aug 2013 19:58:15 +0000 (19:58 +0000)]
PETSc/Trilinos BlockVectors now only allow assignment if destination is empty or had the same number of blocks

git-svn-id: https://svn.dealii.org/trunk@30307 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoadd missing compress() call in step-32
Timo Heister [Tue, 13 Aug 2013 19:55:44 +0000 (19:55 +0000)]
add missing compress() call in step-32

git-svn-id: https://svn.dealii.org/trunk@30306 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoadd new test
Timo Heister [Tue, 13 Aug 2013 19:55:26 +0000 (19:55 +0000)]
add new test

git-svn-id: https://svn.dealii.org/trunk@30305 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoupdate my affiliation
Timo Heister [Tue, 13 Aug 2013 18:58:07 +0000 (18:58 +0000)]
update my affiliation

git-svn-id: https://svn.dealii.org/trunk@30304 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoadd a publication
Timo Heister [Tue, 13 Aug 2013 18:48:27 +0000 (18:48 +0000)]
add a publication

git-svn-id: https://svn.dealii.org/trunk@30303 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoAdd TrilinosWrappers::PreconditionIdentity, i.e., identity preconditioner for Trilinos.
Bruno Turcksin [Tue, 13 Aug 2013 17:30:01 +0000 (17:30 +0000)]
Add TrilinosWrappers::PreconditionIdentity, i.e., identity preconditioner for Trilinos.

git-svn-id: https://svn.dealii.org/trunk@30302 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoBugfix: Rename private member variables so that they do not start with a
Matthias Maier [Tue, 13 Aug 2013 16:40:38 +0000 (16:40 +0000)]
Bugfix: Rename private member variables so that they do not start with a
leading dash

git-svn-id: https://svn.dealii.org/trunk@30301 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoCMake: Fix copy&paste error
Matthias Maier [Tue, 13 Aug 2013 03:36:11 +0000 (03:36 +0000)]
CMake: Fix copy&paste error

git-svn-id: https://svn.dealii.org/trunk@30300 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoCMake: fix build type handling in DEAL_II_* macros
Matthias Maier [Tue, 13 Aug 2013 03:18:30 +0000 (03:18 +0000)]
CMake: fix build type handling in DEAL_II_* macros

git-svn-id: https://svn.dealii.org/trunk@30299 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoCMake: Export LAPACK_DIR and BLAS_DIR if they are needed
Matthias Maier [Tue, 13 Aug 2013 02:55:42 +0000 (02:55 +0000)]
CMake: Export LAPACK_DIR and BLAS_DIR if they are needed

git-svn-id: https://svn.dealii.org/trunk@30298 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agostep-51 use workstream for postprocessing the local solution
Scott Miller [Tue, 13 Aug 2013 02:50:00 +0000 (02:50 +0000)]
step-51 use workstream for postprocessing the local solution

git-svn-id: https://svn.dealii.org/trunk@30297 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoMinor cleanups.
Wolfgang Bangerth [Tue, 13 Aug 2013 00:50:38 +0000 (00:50 +0000)]
Minor cleanups.

git-svn-id: https://svn.dealii.org/trunk@30296 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFix a bug in petsc_matrix_free.
Bruno Turcksin [Mon, 12 Aug 2013 21:42:04 +0000 (21:42 +0000)]
Fix a bug in petsc_matrix_free.

git-svn-id: https://svn.dealii.org/trunk@30295 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoAugment documentation.
Wolfgang Bangerth [Mon, 12 Aug 2013 21:06:05 +0000 (21:06 +0000)]
Augment documentation.

git-svn-id: https://svn.dealii.org/trunk@30294 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoCMake: Update the documentation as well
Matthias Maier [Mon, 12 Aug 2013 19:32:40 +0000 (19:32 +0000)]
CMake: Update the documentation as well

git-svn-id: https://svn.dealii.org/trunk@30293 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoCMake: *yay* CMake's FindBLAS.cmake and FindLAPACK.cmake apparently set
Matthias Maier [Mon, 12 Aug 2013 19:28:29 +0000 (19:28 +0000)]
CMake: *yay* CMake's FindBLAS.cmake and FindLAPACK.cmake apparently set
BLAS_LIBRARIES and LAPACK_LIBRARIES to "FALSE" if they weren't found. We
have to manually remove this content...

Now, these are so many changes to the native behaviour that it deserves its
own FindDEALII_LAPACK.cmake module to do this properly

git-svn-id: https://svn.dealii.org/trunk@30292 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoUpdate heading
Martin Kronbichler [Mon, 12 Aug 2013 18:38:33 +0000 (18:38 +0000)]
Update heading

git-svn-id: https://svn.dealii.org/trunk@30291 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoAdd missing output
Martin Kronbichler [Mon, 12 Aug 2013 18:36:04 +0000 (18:36 +0000)]
Add missing output

git-svn-id: https://svn.dealii.org/trunk@30290 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoSome results on computing times, cleanup.
Martin Kronbichler [Mon, 12 Aug 2013 16:02:06 +0000 (16:02 +0000)]
Some results on computing times, cleanup.

git-svn-id: https://svn.dealii.org/trunk@30289 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agostep-42.cc still had an old QPL license header
Felix Gruber [Mon, 12 Aug 2013 14:22:37 +0000 (14:22 +0000)]
step-42.cc still had an old QPL license header

Updated it to the new copyright header mentioning the LGPL and
reconstructed the authors of step-42.cc from its svn history.

git-svn-id: https://svn.dealii.org/trunk@30288 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFix doxygen markup in documentation of step 51.
Felix Gruber [Mon, 12 Aug 2013 11:22:14 +0000 (11:22 +0000)]
Fix doxygen markup in documentation of step 51.

git-svn-id: https://svn.dealii.org/trunk@30287 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFix list markup in the changelog.
Felix Gruber [Mon, 12 Aug 2013 09:22:34 +0000 (09:22 +0000)]
Fix list markup in the changelog.

git-svn-id: https://svn.dealii.org/trunk@30286 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agomore step-51 documentation
Scott Miller [Sun, 11 Aug 2013 15:59:17 +0000 (15:59 +0000)]
more step-51 documentation

git-svn-id: https://svn.dealii.org/trunk@30285 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoLimit test to what's working right now.
Wolfgang Bangerth [Sat, 10 Aug 2013 22:17:31 +0000 (22:17 +0000)]
Limit test to what's working right now.

git-svn-id: https://svn.dealii.org/trunk@30284 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoDo not use member function that doesn't exist.
Wolfgang Bangerth [Sat, 10 Aug 2013 22:09:56 +0000 (22:09 +0000)]
Do not use member function that doesn't exist.

git-svn-id: https://svn.dealii.org/trunk@30283 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoLeave a couple of TODOs. There are ways to make the current code simpler, but most...
Wolfgang Bangerth [Sat, 10 Aug 2013 21:27:59 +0000 (21:27 +0000)]
Leave a couple of TODOs. There are ways to make the current code simpler, but most of what needs to work works now, so I will leave it at this for the moment and we will see if anyone runs into the assertions that remain for now.

git-svn-id: https://svn.dealii.org/trunk@30282 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoRemove test now no longer necessary. Move test that now works.
Wolfgang Bangerth [Sat, 10 Aug 2013 21:15:46 +0000 (21:15 +0000)]
Remove test now no longer necessary. Move test that now works.

git-svn-id: https://svn.dealii.org/trunk@30281 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoReplace removed function call by one that still works.
Wolfgang Bangerth [Sat, 10 Aug 2013 19:29:11 +0000 (19:29 +0000)]
Replace removed function call by one that still works.

git-svn-id: https://svn.dealii.org/trunk@30280 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoClean up workstream data in step-51
Scott Miller [Sat, 10 Aug 2013 18:59:03 +0000 (18:59 +0000)]
Clean up workstream data in step-51

git-svn-id: https://svn.dealii.org/trunk@30279 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoMake sure the common case actually works...
Wolfgang Bangerth [Sat, 10 Aug 2013 14:00:56 +0000 (14:00 +0000)]
Make sure the common case actually works...

git-svn-id: https://svn.dealii.org/trunk@30278 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoImplement face_to_cell_index() also for FESystem.
Wolfgang Bangerth [Sat, 10 Aug 2013 11:44:30 +0000 (11:44 +0000)]
Implement face_to_cell_index() also for FESystem.

git-svn-id: https://svn.dealii.org/trunk@30277 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoImplement the face_to_cell() function for the FE_Q element family, at least for 2d...
Wolfgang Bangerth [Sat, 10 Aug 2013 10:52:57 +0000 (10:52 +0000)]
Implement the face_to_cell() function for the FE_Q element family, at least for 2d. In 3d, someone will need to draw a few pictures and figure things out, but at least for now one gets an ExcNotImplemented().

git-svn-id: https://svn.dealii.org/trunk@30276 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoUse standard arrangement of function arguments. Document two arguments that are unuse...
Wolfgang Bangerth [Sat, 10 Aug 2013 10:30:46 +0000 (10:30 +0000)]
Use standard arrangement of function arguments. Document two arguments that are unused in a function.

git-svn-id: https://svn.dealii.org/trunk@30275 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoRemove tests now no longer useful after the removal of the function they test.
Wolfgang Bangerth [Sat, 10 Aug 2013 09:37:15 +0000 (09:37 +0000)]
Remove tests now no longer useful after the removal of the function they test.

git-svn-id: https://svn.dealii.org/trunk@30274 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoSmall update
Martin Kronbichler [Sat, 10 Aug 2013 09:05:05 +0000 (09:05 +0000)]
Small update

git-svn-id: https://svn.dealii.org/trunk@30273 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoWorkaround for an issue with gcc-4.1 and an explicit destructor call
Matthias Maier [Sat, 10 Aug 2013 07:47:53 +0000 (07:47 +0000)]
Workaround for an issue with gcc-4.1 and an explicit destructor call

(aka I don't want to give up yet and fully revert the change ;-) )

git-svn-id: https://svn.dealii.org/trunk@30272 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoMove FiniteElementData::face_to_cell_index to FiniteElement. The function needs to...
Wolfgang Bangerth [Fri, 9 Aug 2013 22:37:31 +0000 (22:37 +0000)]
Move FiniteElementData::face_to_cell_index to FiniteElement. The function needs to be virtual, following my changes yesterday, and it would be the only virtual function of this base class. Thus, it doesn't fit into the "data" part of this class if its implementation can be and will be overloaded.

Also remove FiniteElementData::face_to_equivalent_cell_index: this function had been deprecated a while back already.

git-svn-id: https://svn.dealii.org/trunk@30271 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoAdd support for Windows/MinGW32
Matthias Maier [Fri, 9 Aug 2013 20:27:34 +0000 (20:27 +0000)]
Add support for Windows/MinGW32

git-svn-id: https://svn.dealii.org/trunk@30270 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoDisable bundled TBB for Windows targets as well
Matthias Maier [Fri, 9 Aug 2013 20:27:19 +0000 (20:27 +0000)]
Disable bundled TBB for Windows targets as well

git-svn-id: https://svn.dealii.org/trunk@30269 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agouse meshworker for step-51
Scott Miller [Fri, 9 Aug 2013 19:17:54 +0000 (19:17 +0000)]
use meshworker for step-51

git-svn-id: https://svn.dealii.org/trunk@30268 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoCompile with -Wno-long-long to suppress a lot of warnings when compiling in
Matthias Maier [Fri, 9 Aug 2013 16:29:32 +0000 (16:29 +0000)]
Compile with -Wno-long-long to suppress a lot of warnings when compiling in
C++98 mode

git-svn-id: https://svn.dealii.org/trunk@30267 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoAdd a small change note
Matthias Maier [Fri, 9 Aug 2013 12:37:35 +0000 (12:37 +0000)]
Add a small change note

git-svn-id: https://svn.dealii.org/trunk@30265 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoMerge branch 'branch_port_to_libcxx' into trunk
Matthias Maier [Fri, 9 Aug 2013 12:37:28 +0000 (12:37 +0000)]
Merge branch 'branch_port_to_libcxx' into trunk

This merge fixes several language standard incompatibilities. With this
LLVM's libcxx (revision >= 188068) is now supported.

git-svn-id: https://svn.dealii.org/trunk@30264 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFix typos
Matthias Maier [Fri, 9 Aug 2013 12:20:08 +0000 (12:20 +0000)]
Fix typos

git-svn-id: https://svn.dealii.org/branches/branch_port_to_libcxx@30263 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoAdd step-51 comments
Scott Miller [Fri, 9 Aug 2013 10:42:05 +0000 (10:42 +0000)]
Add step-51 comments

git-svn-id: https://svn.dealii.org/trunk@30262 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoGuard new assertion with a test for standard orientation.
Wolfgang Bangerth [Fri, 9 Aug 2013 10:05:07 +0000 (10:05 +0000)]
Guard new assertion with a test for standard orientation.

git-svn-id: https://svn.dealii.org/trunk@30261 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoDocument a problem with FiniteElementBase::face_to_cell_index in a couple of differen...
Wolfgang Bangerth [Thu, 8 Aug 2013 22:11:08 +0000 (22:11 +0000)]
Document a problem with FiniteElementBase::face_to_cell_index in a couple of different places. Add an assertion. Add two tests.

git-svn-id: https://svn.dealii.org/trunk@30260 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoSubmit the essence of the last bit of the patch by Oleh Krehel, now that I actually...
Wolfgang Bangerth [Thu, 8 Aug 2013 19:58:46 +0000 (19:58 +0000)]
Submit the essence of the last bit of the patch by Oleh Krehel, now that I actually understand it. Explain it in a comment.

git-svn-id: https://svn.dealii.org/trunk@30259 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoPatch by Oleh Krehel: many typo and other small fixes.
Wolfgang Bangerth [Thu, 8 Aug 2013 17:31:57 +0000 (17:31 +0000)]
Patch by Oleh Krehel: many typo and other small fixes.

git-svn-id: https://svn.dealii.org/trunk@30258 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFix typos in the glossary.
Bruno Turcksin [Thu, 8 Aug 2013 14:52:38 +0000 (14:52 +0000)]
Fix typos in the glossary.

git-svn-id: https://svn.dealii.org/trunk@30257 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoUpdates to HDG documentation
Scott Miller [Thu, 8 Aug 2013 14:09:27 +0000 (14:09 +0000)]
Updates to HDG documentation

git-svn-id: https://svn.dealii.org/trunk@30256 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoMerge step-51 botched commit.
Scott Miller [Thu, 8 Aug 2013 13:05:04 +0000 (13:05 +0000)]
Merge step-51 botched commit.

git-svn-id: https://svn.dealii.org/trunk@30255 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoAdd output for step-51
Scott Miller [Thu, 8 Aug 2013 02:07:07 +0000 (02:07 +0000)]
Add output for step-51

git-svn-id: https://svn.dealii.org/trunk@30254 0785d39b-7218-0410-832d-ea1e28bc413d

11 years ago#include cleanup. multigrid.h included <data_out.h> for no apparent reason.
Wolfgang Bangerth [Wed, 7 Aug 2013 21:06:29 +0000 (21:06 +0000)]
#include cleanup. multigrid.h included <data_out.h> for no apparent reason.

git-svn-id: https://svn.dealii.org/trunk@30253 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoPatch by Oleh Krehel: allow suppressing writing date and time in generating VTK and...
Wolfgang Bangerth [Wed, 7 Aug 2013 21:01:03 +0000 (21:01 +0000)]
Patch by Oleh Krehel: allow suppressing writing date and time in generating VTK and VTU output.

git-svn-id: https://svn.dealii.org/trunk@30252 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoAdd list with convergence rates in 3d
Martin Kronbichler [Wed, 7 Aug 2013 17:42:54 +0000 (17:42 +0000)]
Add list with convergence rates in 3d

git-svn-id: https://svn.dealii.org/trunk@30251 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoAdjust output: FE_FaceQ now has support points
Martin Kronbichler [Wed, 7 Aug 2013 16:36:48 +0000 (16:36 +0000)]
Adjust output: FE_FaceQ now has support points

git-svn-id: https://svn.dealii.org/trunk@30250 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoTests for face interpolation in FE_FaceQ
Martin Kronbichler [Wed, 7 Aug 2013 15:49:45 +0000 (15:49 +0000)]
Tests for face interpolation in FE_FaceQ

git-svn-id: https://svn.dealii.org/trunk@30249 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoTests for face interpolation in FE_FaceQ
Martin Kronbichler [Wed, 7 Aug 2013 15:49:33 +0000 (15:49 +0000)]
Tests for face interpolation in FE_FaceQ

git-svn-id: https://svn.dealii.org/trunk@30248 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFix bug
Martin Kronbichler [Wed, 7 Aug 2013 14:21:53 +0000 (14:21 +0000)]
Fix bug

git-svn-id: https://svn.dealii.org/trunk@30247 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoImplement adaptivity. For this, need to add a few functions to FE_FaceQ like face...
Martin Kronbichler [Wed, 7 Aug 2013 13:13:39 +0000 (13:13 +0000)]
Implement adaptivity. For this, need to add a few functions to FE_FaceQ like face interpolation matrices. Also, change the support points of FE_FaceQ to Gauss-Lobatto points instead of equidistant ones as listed in a todo.

git-svn-id: https://svn.dealii.org/trunk@30246 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoAdd missing instantiation.
Martin Kronbichler [Wed, 7 Aug 2013 10:03:44 +0000 (10:03 +0000)]
Add missing instantiation.

git-svn-id: https://svn.dealii.org/trunk@30245 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFix high memory consumption in ChunkSparsityPattern::copy_from by creating the reduce...
Martin Kronbichler [Wed, 7 Aug 2013 09:47:47 +0000 (09:47 +0000)]
Fix high memory consumption in ChunkSparsityPattern::copy_from by creating the reduced sparsity pattern using a CompressedSimpleSparsityPattern object for gathering the small indices

git-svn-id: https://svn.dealii.org/trunk@30244 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFix a warning
Martin Kronbichler [Wed, 7 Aug 2013 09:07:49 +0000 (09:07 +0000)]
Fix a warning

git-svn-id: https://svn.dealii.org/trunk@30243 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoMerge branch 'trunk' into branch_port_to_libcxx
Matthias Maier [Wed, 7 Aug 2013 09:04:39 +0000 (09:04 +0000)]
Merge branch 'trunk' into branch_port_to_libcxx

Conflicts:
deal.II/source/numerics/data_out.inst.in

git-svn-id: https://svn.dealii.org/branches/branch_port_to_libcxx@30242 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoWhen reading the C++ standard 12.4 I'm not quite sure whether this is a bug
Matthias Maier [Wed, 7 Aug 2013 09:03:04 +0000 (09:03 +0000)]
When reading the C++ standard 12.4 I'm not quite sure whether this is a bug
or not.

But anyway, simplifying the destructor call resolves this issue, so there
is no need for a guard and an expensive configure test.

git-svn-id: https://svn.dealii.org/branches/branch_port_to_libcxx@30241 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFix misspelling of HTML code.
Wolfgang Bangerth [Wed, 7 Aug 2013 08:45:52 +0000 (08:45 +0000)]
Fix misspelling of HTML code.

git-svn-id: https://svn.dealii.org/trunk@30240 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFix typos.
Wolfgang Bangerth [Wed, 7 Aug 2013 07:55:06 +0000 (07:55 +0000)]
Fix typos.

git-svn-id: https://svn.dealii.org/trunk@30239 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFix bug #78: BlockMatrixBase::set/add had race conditions when used from multiple...
Wolfgang Bangerth [Tue, 6 Aug 2013 21:44:57 +0000 (21:44 +0000)]
Fix bug #78: BlockMatrixBase::set/add had race conditions when used from multiple threads because these functions used scratch arrays. One just needed to add a mutex to guard these data structures.

git-svn-id: https://svn.dealii.org/trunk@30238 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoRemove namespace step-51 as the class name already contains step-51. Speed up assembl...
Martin Kronbichler [Tue, 6 Aug 2013 17:03:45 +0000 (17:03 +0000)]
Remove namespace step-51 as the class name already contains step-51. Speed up assembly by caching the output of FEValuesExtractors and only working on dofs with support on faces

git-svn-id: https://svn.dealii.org/trunk@30237 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFirst version of new tutorial example demonstrating hybridizable discontinuous Galerk...
Martin Kronbichler [Tue, 6 Aug 2013 13:30:49 +0000 (13:30 +0000)]
First version of new tutorial example demonstrating hybridizable discontinuous Galerkin methods on the problem of step-7

git-svn-id: https://svn.dealii.org/trunk@30236 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoFix copy-paste error.
Wolfgang Bangerth [Mon, 5 Aug 2013 22:59:01 +0000 (22:59 +0000)]
Fix copy-paste error.

git-svn-id: https://svn.dealii.org/trunk@30235 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoIt looks like block matrices of all type were not freeing memory at exit. Fixed.
Timo Heister [Mon, 5 Aug 2013 22:42:38 +0000 (22:42 +0000)]
It looks like block matrices of all type were not freeing memory at exit. Fixed.

git-svn-id: https://svn.dealii.org/trunk@30234 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agoadd destructor to PETScWrappers::MPI::SparseMatrix to not leak memory
Timo Heister [Mon, 5 Aug 2013 22:41:29 +0000 (22:41 +0000)]
add destructor to PETScWrappers::MPI::SparseMatrix to not leak memory

git-svn-id: https://svn.dealii.org/trunk@30233 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agochange recommended numdiff export for the regression tests
Timo Heister [Mon, 5 Aug 2013 22:14:44 +0000 (22:14 +0000)]
change recommended numdiff export for the regression tests

git-svn-id: https://svn.dealii.org/trunk@30232 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agofix some of the PETSc memory leaks
Timo Heister [Mon, 5 Aug 2013 22:07:43 +0000 (22:07 +0000)]
fix some of the PETSc memory leaks

git-svn-id: https://svn.dealii.org/trunk@30231 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agofix output
Timo Heister [Mon, 5 Aug 2013 22:06:14 +0000 (22:06 +0000)]
fix output

git-svn-id: https://svn.dealii.org/trunk@30230 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agosimple test to see memory leaks
Timo Heister [Mon, 5 Aug 2013 22:02:59 +0000 (22:02 +0000)]
simple test to see memory leaks

git-svn-id: https://svn.dealii.org/trunk@30229 0785d39b-7218-0410-832d-ea1e28bc413d

11 years agocheck for PETSc memory leaks
Timo Heister [Mon, 5 Aug 2013 22:02:32 +0000 (22:02 +0000)]
check for PETSc memory leaks

We are leaking in many tests, actually.

git-svn-id: https://svn.dealii.org/trunk@30228 0785d39b-7218-0410-832d-ea1e28bc413d


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