]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
4 years agoMerge pull request #10507 from bangerth/tut-graph
Matthias Maier [Thu, 11 Jun 2020 17:57:54 +0000 (12:57 -0500)]
Merge pull request #10507 from bangerth/tut-graph

Improve tutorial graph layout.

4 years agoMerge pull request #10508 from bangerth/cmake
Matthias Maier [Thu, 11 Jun 2020 17:57:12 +0000 (12:57 -0500)]
Merge pull request #10508 from bangerth/cmake

Better describe what we do when running cmake for code gallery programs.

4 years agoMerge pull request #10511 from peterrum/tria_level_cell_iterator
Matthias Maier [Thu, 11 Jun 2020 17:56:51 +0000 (12:56 -0500)]
Merge pull request #10511 from peterrum/tria_level_cell_iterator

Add alias Triangulation::level_cell_iterator

4 years agoMerge pull request #10512 from bangerth/affine-3
Matthias Maier [Thu, 11 Jun 2020 17:55:13 +0000 (12:55 -0500)]
Merge pull request #10512 from bangerth/affine-3

Remove a surrounding class that is now no longer necessary.

4 years agoMerge pull request #10513 from bangerth/affine-4
Matthias Maier [Thu, 11 Jun 2020 14:59:30 +0000 (09:59 -0500)]
Merge pull request #10513 from bangerth/affine-4

Add a changelog entry.

4 years agoAdd a changelog entry. 10513/head
Wolfgang Bangerth [Thu, 11 Jun 2020 13:03:34 +0000 (07:03 -0600)]
Add a changelog entry.

4 years agoRemove a surrounding class that is now no longer necessary. 10512/head
Wolfgang Bangerth [Wed, 10 Jun 2020 22:44:00 +0000 (16:44 -0600)]
Remove a surrounding class that is now no longer necessary.

4 years agoMerge pull request #10478 from nfehn/tolerance_find_active_cells
Luca Heltai [Thu, 11 Jun 2020 12:44:58 +0000 (14:44 +0200)]
Merge pull request #10478 from nfehn/tolerance_find_active_cells

Equip GridTools::find_active_cell_around_point() with tolerance

4 years agoMerge pull request #10473 from bangerth/affine-2
Daniel Arndt [Thu, 11 Jun 2020 12:26:36 +0000 (08:26 -0400)]
Merge pull request #10473 from bangerth/affine-2

4 years agoAdd alias Triangulation::level_cell_iterator 10511/head
Peter Munch [Thu, 11 Jun 2020 11:10:30 +0000 (13:10 +0200)]
Add alias Triangulation::level_cell_iterator

4 years agoMerge pull request #10509 from bangerth/style
Martin Kronbichler [Thu, 11 Jun 2020 05:44:57 +0000 (07:44 +0200)]
Merge pull request #10509 from bangerth/style

Use usual ++var style.

4 years agoMerge pull request #10505 from tjhei/feiv_test_update
Matthias Maier [Thu, 11 Jun 2020 03:42:30 +0000 (22:42 -0500)]
Merge pull request #10505 from tjhei/feiv_test_update

improve tests/feinterface/*

4 years agoMerge pull request #10504 from Rombur/cuda_mf_fix
Daniel Arndt [Thu, 11 Jun 2020 01:45:19 +0000 (21:45 -0400)]
Merge pull request #10504 from Rombur/cuda_mf_fix

4 years agoFix comparison warning 10504/head
Bruno Turcksin [Thu, 11 Jun 2020 00:49:30 +0000 (00:49 +0000)]
Fix comparison warning

4 years agoFix a bug in CUDAWrappers::MatrixFree::cell_loop when different partitioners are...
Bruno Turcksin [Wed, 10 Jun 2020 19:16:15 +0000 (19:16 +0000)]
Fix a bug in CUDAWrappers::MatrixFree::cell_loop when different partitioners are used

4 years agoMerge pull request #10496 from masterleinad/fix_petsc_complex_instantiation
Daniel Arndt [Thu, 11 Jun 2020 00:25:01 +0000 (20:25 -0400)]
Merge pull request #10496 from masterleinad/fix_petsc_complex_instantiation

Add missing instantiation for PETSc with complex values

4 years agoMake move operation explicit. 10473/head
Wolfgang Bangerth [Wed, 10 Jun 2020 22:43:33 +0000 (16:43 -0600)]
Make move operation explicit.

4 years agoUse usual ++var style. 10509/head
Wolfgang Bangerth [Wed, 10 Jun 2020 22:11:14 +0000 (16:11 -0600)]
Use usual ++var style.

4 years agoBetter describe what we do when running cmake for code gallery programs. 10508/head
Wolfgang Bangerth [Wed, 10 Jun 2020 22:10:32 +0000 (16:10 -0600)]
Better describe what we do when running cmake for code gallery programs.

4 years agoImprove tutorial graph layout. 10507/head
Wolfgang Bangerth [Wed, 10 Jun 2020 22:09:34 +0000 (16:09 -0600)]
Improve tutorial graph layout.

Specifically, don't treat edges from one code-gallery to another code-gallery program
as requiring special weight.

Also show these edges in gray instead of the white we're currently using (i.e., not
visible at all).

4 years agoMerge pull request #10465 from peterrum/internal_TriaAccessorImplementation_Implement...
Matthias Maier [Wed, 10 Jun 2020 20:59:42 +0000 (15:59 -0500)]
Merge pull request #10465 from peterrum/internal_TriaAccessorImplementation_Implementation

Remove unneeded template argument

4 years agoAugment some documentation. Mark functions as 'noexcept'.
Wolfgang Bangerth [Wed, 10 Jun 2020 20:58:19 +0000 (14:58 -0600)]
Augment some documentation. Mark functions as 'noexcept'.

4 years agoimprove tests/feinterface/* 10505/head
Timo Heister [Wed, 10 Jun 2020 19:31:21 +0000 (15:31 -0400)]
improve tests/feinterface/*

- use -1 instead of unsigned int

4 years agoMerge pull request #10442 from peterrum/pft_update_test_output
Daniel Arndt [Wed, 10 Jun 2020 18:10:00 +0000 (14:10 -0400)]
Merge pull request #10442 from peterrum/pft_update_test_output

Update output of test

4 years agoMerge pull request #10501 from masterleinad/remove_percent
Matthias Maier [Wed, 10 Jun 2020 17:54:37 +0000 (12:54 -0500)]
Merge pull request #10501 from masterleinad/remove_percent

Remove % in documentation

4 years agoMerge pull request #10502 from masterleinad/remove_appveyor
Timo Heister [Wed, 10 Jun 2020 17:52:57 +0000 (13:52 -0400)]
Merge pull request #10502 from masterleinad/remove_appveyor

Remove appveyor

4 years agoMerge pull request #10491 from tjhei/github_actions_indent
Daniel Arndt [Wed, 10 Jun 2020 17:42:09 +0000 (13:42 -0400)]
Merge pull request #10491 from tjhei/github_actions_indent

[CI] add githubactions indent/documentation check

4 years agoMerge pull request #10499 from tjhei/ci_github_actions_windows_no_zlib
Daniel Arndt [Wed, 10 Jun 2020 16:03:42 +0000 (12:03 -0400)]
Merge pull request #10499 from tjhei/ci_github_actions_windows_no_zlib

[CI] github-actions windows: disable zlib

4 years agoMerge pull request #10485 from drwells/readme-link
Daniel Arndt [Wed, 10 Jun 2020 15:55:53 +0000 (11:55 -0400)]
Merge pull request #10485 from drwells/readme-link

Fix a dead link in the top level readme.

4 years agoRemove appveyor 10502/head
Daniel Arndt [Wed, 10 Jun 2020 15:42:15 +0000 (11:42 -0400)]
Remove appveyor

4 years agoRemove % in documentation 10501/head
Daniel Arndt [Wed, 10 Jun 2020 14:27:11 +0000 (10:27 -0400)]
Remove % in documentation

4 years ago[CI] github-actions windows: disable zlib 10499/head
Timo Heister [Wed, 10 Jun 2020 15:02:14 +0000 (11:02 -0400)]
[CI] github-actions windows: disable zlib

The zlib found on the system is a x86 lib that is not compatible with
our x64 build. Disable auto detection for now.

4 years agoMerge pull request #10495 from tjhei/doxygen_ref_step_links_only_numbered
Daniel Arndt [Wed, 10 Jun 2020 14:20:04 +0000 (10:20 -0400)]
Merge pull request #10495 from tjhei/doxygen_ref_step_links_only_numbered

doxygen filter: do not try to link step- without number

4 years agoAdd missing instantiation for PETSc with complex values 10496/head
Daniel Arndt [Wed, 10 Jun 2020 14:12:00 +0000 (10:12 -0400)]
Add missing instantiation for PETSc with complex values

4 years agodoxygen filter: do not try to link step- without number 10495/head
Timo Heister [Wed, 10 Jun 2020 14:07:19 +0000 (10:07 -0400)]
doxygen filter: do not try to link step- without number

We are currently trying to create a hyperlink for every occurance of
step-BLA found in the documentation. This requires escaping words like
"step-number" using a backslash. This is confusing.
Instead, only do this if the dash is followed by a digit.

Fixes #10489

4 years agoMerge pull request #10453 from peterrum/pft_level_fix
Martin Kronbichler [Wed, 10 Jun 2020 12:34:16 +0000 (14:34 +0200)]
Merge pull request #10453 from peterrum/pft_level_fix

Fix distribution of levels in pft

4 years ago[CI] add githubactions indent/documentation check 10491/head
Timo Heister [Wed, 10 Jun 2020 11:59:06 +0000 (07:59 -0400)]
[CI] add githubactions indent/documentation check

add a new "indent" check on github actions that mirrors what we do on
travisci (to ultimately replace it).

4 years agoadd an include
Matthias Maier [Wed, 10 Jun 2020 00:59:08 +0000 (19:59 -0500)]
add an include

4 years agoThreadLocalStorage: add copy and move constructors
Matthias Maier [Wed, 10 Jun 2020 00:51:27 +0000 (19:51 -0500)]
ThreadLocalStorage: add copy and move constructors

Add copy and move constructors and corresponding copy and move
assignment operators.

4 years agoMake the AffineConstraints scratch storage object-local.
Wolfgang Bangerth [Fri, 5 Jun 2020 13:17:46 +0000 (07:17 -0600)]
Make the AffineConstraints scratch storage object-local.

4 years agoNext step in fixing AffineConstraints.
Wolfgang Bangerth [Fri, 5 Jun 2020 00:12:47 +0000 (18:12 -0600)]
Next step in fixing AffineConstraints.

4 years agoMerge pull request #10162 from jppelteret/sd-tests_01
Matthias Maier [Tue, 9 Jun 2020 19:34:34 +0000 (14:34 -0500)]
Merge pull request #10162 from jppelteret/sd-tests_01

Refactor some SD tests

4 years agoFix a dead link in the top level readme. 10485/head
David Wells [Tue, 9 Jun 2020 14:54:08 +0000 (10:54 -0400)]
Fix a dead link in the top level readme.

4 years agoMerge pull request #10484 from tamiko/avoid_symbol_clash
Matthias Maier [Tue, 9 Jun 2020 18:19:26 +0000 (13:19 -0500)]
Merge pull request #10484 from tamiko/avoid_symbol_clash

CMake: Avoid another symbol clash with adol-c

4 years agoMerge pull request #10483 from tamiko/fix_compilation
Matthias Maier [Tue, 9 Jun 2020 18:19:13 +0000 (13:19 -0500)]
Merge pull request #10483 from tamiko/fix_compilation

Fix compilation with c++14: add missing instantiation

4 years agoGridTools::find_active_cell_around_point(): introduce tolerance as parameter 10478/head
Niklas Fehn [Sun, 7 Jun 2020 20:33:41 +0000 (22:33 +0200)]
GridTools::find_active_cell_around_point(): introduce tolerance as parameter

4 years agoMerge pull request #10477 from nfehn/refactoring_find_all_active_cells
Peter Munch [Tue, 9 Jun 2020 10:14:47 +0000 (12:14 +0200)]
Merge pull request #10477 from nfehn/refactoring_find_all_active_cells

refactoring of GridTools::find_all_active_cells_around_point()

4 years agoMerge pull request #10456 from nfehn/find_active_cells
Martin Kronbichler [Tue, 9 Jun 2020 10:05:45 +0000 (12:05 +0200)]
Merge pull request #10456 from nfehn/find_active_cells

Fix bug in find_active_cell_around_point_tolerance()

4 years agorefactoring of GridTools::find_all_active_cells_around_point() 10477/head
Niklas Fehn [Sun, 7 Jun 2020 17:22:33 +0000 (19:22 +0200)]
refactoring of GridTools::find_all_active_cells_around_point()

4 years agoCMake: Avoid another symbol clash with adol-c 10484/head
Matthias Maier [Tue, 9 Jun 2020 03:45:56 +0000 (22:45 -0500)]
CMake: Avoid another symbol clash with adol-c

4 years agosilence doxygen 10483/head
Matthias Maier [Tue, 9 Jun 2020 02:49:57 +0000 (21:49 -0500)]
silence doxygen

4 years agoadd missing instantiations
Matthias Maier [Tue, 9 Jun 2020 01:56:11 +0000 (20:56 -0500)]
add missing instantiations

4 years agoMerge pull request #10348 from mathmerizing/MGTransfer-add-constraints
Daniel Arndt [Mon, 8 Jun 2020 19:40:24 +0000 (15:40 -0400)]
Merge pull request #10348 from mathmerizing/MGTransfer-add-constraints

4 years agoMoved copy of vector into if block 10348/head
Julian Roth [Sat, 6 Jun 2020 20:17:13 +0000 (22:17 +0200)]
Moved copy of vector into if block

4 years agoMerge pull request #10458 from nfehn/docu_find_active_cells
Martin Kronbichler [Sat, 6 Jun 2020 17:38:41 +0000 (19:38 +0200)]
Merge pull request #10458 from nfehn/docu_find_active_cells

remove redundant documentation for GridTools::find_active_cell_around_point() functions

4 years agoMerge pull request #10470 from masterleinad/fix_more_address_sanitizer
Wolfgang Bangerth [Sat, 6 Jun 2020 14:01:17 +0000 (16:01 +0200)]
Merge pull request #10470 from masterleinad/fix_more_address_sanitizer

Fix more issues found by AddressSanitizer

4 years agoMerge pull request #10448 from bangerth/tria_object
Daniel Arndt [Sat, 6 Jun 2020 03:44:40 +0000 (23:44 -0400)]
Merge pull request #10448 from bangerth/tria_object

4 years agoMerge pull request #10457 from nfehn/bounding_box
Wolfgang Bangerth [Fri, 5 Jun 2020 21:06:40 +0000 (23:06 +0200)]
Merge pull request #10457 from nfehn/bounding_box

add tolerance to BoundingBox::point_inside()

4 years agoMerge pull request #10416 from masterleinad/remove_author_information
David Wells [Fri, 5 Jun 2020 21:01:37 +0000 (17:01 -0400)]
Merge pull request #10416 from masterleinad/remove_author_information

Remove author information from source files

4 years agoAdd a changelog entry. 10448/head
Wolfgang Bangerth [Fri, 5 Jun 2020 20:37:10 +0000 (14:37 -0600)]
Add a changelog entry.

4 years agoMerge pull request #10467 from tjhei/quick_test_use_with_tbb
Timo Heister [Fri, 5 Jun 2020 20:09:16 +0000 (16:09 -0400)]
Merge pull request #10467 from tjhei/quick_test_use_with_tbb

use WITH_TBB for the affinity quicktest

4 years agoAdded check whether there actually are any user_constraints
Julian Roth [Fri, 5 Jun 2020 19:31:55 +0000 (21:31 +0200)]
Added check whether there actually are any user_constraints

4 years agoMerge pull request #10468 from tjhei/taskflow-update-2.5.0
Daniel Arndt [Fri, 5 Jun 2020 18:51:32 +0000 (14:51 -0400)]
Merge pull request #10468 from tjhei/taskflow-update-2.5.0

update taskflow to 2.5.0

4 years agoFix type of variable in GridTools::compute_local_to_global_vertex_index_map 10470/head
Daniel Arndt [Fri, 5 Jun 2020 18:26:20 +0000 (14:26 -0400)]
Fix type of variable in GridTools::compute_local_to_global_vertex_index_map

4 years agoFix IndexSet::is_ascending_and_one_to_one for empty objects
Daniel Arndt [Fri, 5 Jun 2020 16:32:06 +0000 (12:32 -0400)]
Fix IndexSet::is_ascending_and_one_to_one for empty objects

4 years agoFix move construction/assignment for Subscriptor
Daniel Arndt [Fri, 5 Jun 2020 16:20:01 +0000 (12:20 -0400)]
Fix move construction/assignment for Subscriptor

4 years agoadd docu and test, make implementation more readable 10457/head
Niklas Fehn [Fri, 5 Jun 2020 17:57:53 +0000 (19:57 +0200)]
add docu and test, make implementation more readable

4 years agoUpdated changelog
Julian Roth [Fri, 5 Jun 2020 17:55:07 +0000 (19:55 +0200)]
Updated changelog

4 years agouse WITH_TBB for the affinity quicktest 10467/head
Timo Heister [Fri, 5 Jun 2020 11:41:59 +0000 (07:41 -0400)]
use WITH_TBB for the affinity quicktest

4 years agoupdate taskflow to 2.5.0 10468/head
Timo Heister [Fri, 5 Jun 2020 11:47:15 +0000 (07:47 -0400)]
update taskflow to 2.5.0

4 years agoOnly distributing user constraints before prolongation
Julian Roth [Fri, 5 Jun 2020 17:36:55 +0000 (19:36 +0200)]
Only distributing user constraints before prolongation

4 years agoUpdate output of test 10442/head
Peter Munch [Tue, 2 Jun 2020 14:17:39 +0000 (16:17 +0200)]
Update output of test

4 years agoRemove unneded template argument 10465/head
Peter Munch [Fri, 5 Jun 2020 08:01:33 +0000 (10:01 +0200)]
Remove unneded template argument

4 years agoMerge pull request #10466 from tjhei/doc_tensorproductconstructor
David Wells [Fri, 5 Jun 2020 13:07:37 +0000 (09:07 -0400)]
Merge pull request #10466 from tjhei/doc_tensorproductconstructor

add some documentation to InterpolatedTensorProductGridData

4 years agoMerge pull request #10464 from peterrum/line_orientation_simplify
David Wells [Fri, 5 Jun 2020 13:03:07 +0000 (09:03 -0400)]
Merge pull request #10464 from peterrum/line_orientation_simplify

Simplify line_orientation()

4 years agoMerge pull request #10461 from masterleinad/fix_clang_10_bug_cleaned
David Wells [Fri, 5 Jun 2020 12:14:34 +0000 (08:14 -0400)]
Merge pull request #10461 from masterleinad/fix_clang_10_bug_cleaned

Avoid use-after-scope when calling MappinQCache::initialize multiply

4 years agoadd documentation to InterpolatedTensorProductGridData 10466/head
Timo Heister [Fri, 5 Jun 2020 11:39:23 +0000 (07:39 -0400)]
add documentation to InterpolatedTensorProductGridData

4 years agoallow ghost cells 10456/head
Niklas Fehn [Fri, 5 Jun 2020 08:02:24 +0000 (10:02 +0200)]
allow ghost cells

4 years agoSimplify line_orientation() 10464/head
Peter Munch [Fri, 5 Jun 2020 07:26:16 +0000 (09:26 +0200)]
Simplify line_orientation()

4 years agoMerge pull request #10369 from tjhei/matrix-free-no-bool
Martin Kronbichler [Fri, 5 Jun 2020 05:58:02 +0000 (07:58 +0200)]
Merge pull request #10369 from tjhei/matrix-free-no-bool

matrix-free: do not use bool args

4 years agoAlso fix TransfiniteInterpolationManifold::initialize 10461/head
Daniel Arndt [Fri, 5 Jun 2020 03:03:17 +0000 (23:03 -0400)]
Also fix TransfiniteInterpolationManifold::initialize

4 years agoAvoid use-after-scope when calling MappinQCache::initialize multiply
Daniel Arndt [Fri, 5 Jun 2020 02:40:46 +0000 (22:40 -0400)]
Avoid use-after-scope when calling MappinQCache::initialize multiply

4 years agoremove deprecation macro for now 10369/head
Timo Heister [Thu, 4 Jun 2020 19:52:39 +0000 (15:52 -0400)]
remove deprecation macro for now

4 years agoMerge pull request #10409 from tjhei/quick-test-taskflow
Daniel Arndt [Thu, 4 Jun 2020 21:48:28 +0000 (17:48 -0400)]
Merge pull request #10409 from tjhei/quick-test-taskflow

4 years agoMerge pull request #10454 from bangerth/affine
Daniel Arndt [Thu, 4 Jun 2020 21:02:31 +0000 (17:02 -0400)]
Merge pull request #10454 from bangerth/affine

Move some class declarations into the .h file.

4 years agoMerge pull request #10451 from tjhei/taskflow-rename-without-cpp
Peter Munch [Thu, 4 Jun 2020 20:02:09 +0000 (22:02 +0200)]
Merge pull request #10451 from tjhei/taskflow-rename-without-cpp

rename cpp-taskflow to taskflow

4 years agoremove redundant documentation 10458/head
Niklas Fehn [Thu, 4 Jun 2020 19:31:15 +0000 (21:31 +0200)]
remove redundant documentation

4 years agoadd tolerance to BoundingBox::point_inside()
Niklas Fehn [Thu, 4 Jun 2020 15:52:19 +0000 (17:52 +0200)]
add tolerance to BoundingBox::point_inside()

4 years agoMerge pull request #10455 from masterleinad/fix_clang_10_bug
Daniel Arndt [Thu, 4 Jun 2020 15:15:19 +0000 (11:15 -0400)]
Merge pull request #10455 from masterleinad/fix_clang_10_bug

4 years agofix bug in find_active_cell_around_point_tolerance()
Niklas Fehn [Thu, 4 Jun 2020 15:03:29 +0000 (17:03 +0200)]
fix bug in find_active_cell_around_point_tolerance()

4 years agoCompactify documentation 10455/head
Daniel Arndt [Thu, 4 Jun 2020 13:45:33 +0000 (09:45 -0400)]
Compactify documentation

4 years agoAvoid std::initializer_list
Daniel Arndt [Thu, 4 Jun 2020 13:44:06 +0000 (09:44 -0400)]
Avoid std::initializer_list

4 years agoMerge pull request #10452 from simonsticko/assert_range_in_tensor
Daniel Arndt [Thu, 4 Jun 2020 03:56:37 +0000 (23:56 -0400)]
Merge pull request #10452 from simonsticko/assert_range_in_tensor

Add assert on range of incoming index in Tensor::operator[] const.

4 years agoMove some class declarations into the .h file. 10454/head
Wolfgang Bangerth [Thu, 4 Jun 2020 03:35:12 +0000 (21:35 -0600)]
Move some class declarations into the .h file.

4 years agoFix distribution of levels in pft 10453/head
Peter Munch [Wed, 3 Jun 2020 15:42:09 +0000 (17:42 +0200)]
Fix distribution of levels in pft

4 years agorename cpp-taskflow to taskflow 10451/head
Timo Heister [Wed, 3 Jun 2020 15:27:11 +0000 (11:27 -0400)]
rename cpp-taskflow to taskflow

with the 2.5.0 release (2020/06/01), the library decided to rebrand as
"taskflow" instead of "cpp-taskflow". Reflect this change by replacing
all references in the library.

4 years agorename cpp-taskflow -> taskflow 10409/head
Timo Heister [Wed, 3 Jun 2020 15:24:15 +0000 (11:24 -0400)]
rename cpp-taskflow -> taskflow

4 years agoAdd assert on range of incoming index in Tensor::operator[] const. 10452/head
Simon Sticko [Wed, 3 Jun 2020 14:41:04 +0000 (16:41 +0200)]
Add assert on range of incoming index in Tensor::operator[] const.

4 years agoCI: windows: make test with -j1
Timo Heister [Tue, 2 Jun 2020 01:35:24 +0000 (21:35 -0400)]
CI: windows: make test with -j1

4 years agoMerge pull request #10445 from bangerth/duplication
Daniel Arndt [Tue, 2 Jun 2020 22:18:21 +0000 (18:18 -0400)]
Merge pull request #10445 from bangerth/duplication

Remove some duplicated code.


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