https://gitweb.dealii.org/

Martin Kronbichler [Tue, 5 Feb 2013 20:24:56 +0000 (20:24 +0000)]

Improve add_entries function a little.

git-svn-id: https://svn.dealii.org/trunk@28238 0785d39b-7218-0410-832d-ea1e28bc413d

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Timo Heister [Tue, 5 Feb 2013 16:53:54 +0000 (16:53 +0000)]

make indent

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Timo Heister [Tue, 5 Feb 2013 16:47:49 +0000 (16:47 +0000)]

use the real communicator in PetscSparseMatrix as returned from PETSc

git-svn-id: https://svn.dealii.org/trunk@28236 0785d39b-7218-0410-832d-ea1e28bc413d

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Martin Kronbichler [Tue, 5 Feb 2013 16:36:38 +0000 (16:36 +0000)]

Avoid a few deprecation warnings.

git-svn-id: https://svn.dealii.org/trunk@28235 0785d39b-7218-0410-832d-ea1e28bc413d

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Timo Heister [Tue, 5 Feb 2013 16:36:08 +0000 (16:36 +0000)]

add BlockMatrixBase::add(factor,matrix) (patch from Jean-Paul Pelteret)

git-svn-id: https://svn.dealii.org/trunk@28234 0785d39b-7218-0410-832d-ea1e28bc413d

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Martin Kronbichler [Tue, 5 Feb 2013 16:09:59 +0000 (16:09 +0000)]

Remove a few deprecation warnings.

git-svn-id: https://svn.dealii.org/trunk@28233 0785d39b-7218-0410-832d-ea1e28bc413d

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Timo Heister [Tue, 5 Feb 2013 15:51:14 +0000 (15:51 +0000)]

step-49: add some notes

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Wolfgang Bangerth [Tue, 5 Feb 2013 15:45:05 +0000 (15:45 +0000)]

Make clear that f=1.

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Joerg Frohne [Tue, 5 Feb 2013 04:10:36 +0000 (04:10 +0000)]

minor edits

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Joerg Frohne [Tue, 5 Feb 2013 03:47:26 +0000 (03:47 +0000)]

working on section 2

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Timo Heister [Tue, 5 Feb 2013 00:48:28 +0000 (00:48 +0000)]

step-49: write some text

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Timo Heister [Tue, 5 Feb 2013 00:36:43 +0000 (00:36 +0000)]

work on step-49

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Wolfgang Bangerth [Mon, 4 Feb 2013 17:28:38 +0000 (17:28 +0000)]

Some expansion.

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Wolfgang Bangerth [Mon, 4 Feb 2013 17:28:08 +0000 (17:28 +0000)]

Fix up a couple markup problems.

git-svn-id: https://svn.dealii.org/trunk@28222 0785d39b-7218-0410-832d-ea1e28bc413d

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Timo Heister [Mon, 4 Feb 2013 17:20:49 +0000 (17:20 +0000)]

step-49: add images, write down notes

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Wolfgang Bangerth [Mon, 4 Feb 2013 15:10:18 +0000 (15:10 +0000)]

Add some to the documentation.

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Wolfgang Bangerth [Sat, 2 Feb 2013 21:44:55 +0000 (21:44 +0000)]

Fix a few deprecated function calls.

git-svn-id: https://svn.dealii.org/trunk@28217 0785d39b-7218-0410-832d-ea1e28bc413d

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Wolfgang Bangerth [Sat, 2 Feb 2013 21:35:22 +0000 (21:35 +0000)]

Always use the storage pattern where the diagonal entry comes first in each row, as long as the matrix is square.

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Timo Heister [Sat, 2 Feb 2013 01:11:33 +0000 (01:11 +0000)]

move vertices

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Timo Heister [Sat, 2 Feb 2013 00:58:10 +0000 (00:58 +0000)]

step-49: how to merge triangulations

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Timo Heister [Sat, 2 Feb 2013 00:49:19 +0000 (00:49 +0000)]

gmsh example

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Timo Heister [Fri, 1 Feb 2013 23:33:49 +0000 (23:33 +0000)]

add notes for step-49

git-svn-id: https://svn.dealii.org/trunk@28212 0785d39b-7218-0410-832d-ea1e28bc413d

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Timo Heister [Fri, 1 Feb 2013 23:19:03 +0000 (23:19 +0000)]

starting step-49: more complex meshes

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Timo Heister [Fri, 1 Feb 2013 16:45:07 +0000 (16:45 +0000)]

remove Asserts() in PETSc solvers for now

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Wolfgang Bangerth [Fri, 1 Feb 2013 01:00:10 +0000 (01:00 +0000)]

Minor typo.

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Wolfgang Bangerth [Fri, 1 Feb 2013 00:38:05 +0000 (00:38 +0000)]

Fix reference to picture.

git-svn-id: https://svn.dealii.org/trunk@28207 0785d39b-7218-0410-832d-ea1e28bc413d

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Timo Heister [Fri, 1 Feb 2013 00:23:08 +0000 (00:23 +0000)]

integrate r28202,r28203,r28204 from unified linear algebra branch: introduces get_mpi_communicator() for PETScWrappers::Vector

git-svn-id: https://svn.dealii.org/trunk@28206 0785d39b-7218-0410-832d-ea1e28bc413d

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Timo Heister [Fri, 1 Feb 2013 00:20:22 +0000 (00:20 +0000)]

fix assertion

git-svn-id: https://svn.dealii.org/trunk@28205 0785d39b-7218-0410-832d-ea1e28bc413d

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Joerg Frohne [Wed, 30 Jan 2013 18:04:36 +0000 (18:04 +0000)]

extension of section 7

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Luca Heltai [Wed, 30 Jan 2013 16:57:46 +0000 (16:57 +0000)]

Fixed docs of step-34.

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Martin Kronbichler [Wed, 30 Jan 2013 09:48:19 +0000 (09:48 +0000)]

Adjust one more include file.

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Martin Kronbichler [Wed, 30 Jan 2013 09:40:59 +0000 (09:40 +0000)]

Remove obsolete include.

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Wolfgang Bangerth [Tue, 29 Jan 2013 20:43:12 +0000 (20:43 +0000)]

Add more deprecation notices to files.

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Wolfgang Bangerth [Tue, 29 Jan 2013 17:01:19 +0000 (17:01 +0000)]

Mark deprecation using #warning rather than just a simple piece of text.

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Wolfgang Bangerth [Tue, 29 Jan 2013 16:22:49 +0000 (16:22 +0000)]

Document boundary indicators in the glossary and link to it.

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Wolfgang Bangerth [Tue, 29 Jan 2013 04:35:29 +0000 (04:35 +0000)]

Add a link.

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Guido Kanschat [Mon, 28 Jan 2013 17:06:14 +0000 (17:06 +0000)]

move more images to homepage

git-svn-id: https://svn.dealii.org/trunk@28188 0785d39b-7218-0410-832d-ea1e28bc413d

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Guido Kanschat [Mon, 28 Jan 2013 16:41:09 +0000 (16:41 +0000)]

keep step images unaltered

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Toby D. Young [Mon, 28 Jan 2013 16:18:22 +0000 (16:18 +0000)]

Ignore generated files.

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Toby D. Young [Mon, 28 Jan 2013 16:16:36 +0000 (16:16 +0000)]

Skeleton SLEPC import.

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Toby D. Young [Mon, 28 Jan 2013 14:51:25 +0000 (14:51 +0000)]

Create a solver if there is not one yet, otherwise continue.

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Guido Kanschat [Mon, 28 Jan 2013 13:27:54 +0000 (13:27 +0000)]

move images to homepage

git-svn-id: https://svn.dealii.org/trunk@28181 0785d39b-7218-0410-832d-ea1e28bc413d

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Guido Kanschat [Mon, 28 Jan 2013 13:16:49 +0000 (13:16 +0000)]

move images to homepage

git-svn-id: https://svn.dealii.org/trunk@28180 0785d39b-7218-0410-832d-ea1e28bc413d

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Guido Kanschat [Mon, 28 Jan 2013 12:57:37 +0000 (12:57 +0000)]

move images to homepage

git-svn-id: https://svn.dealii.org/trunk@28179 0785d39b-7218-0410-832d-ea1e28bc413d

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Toby D. Young [Mon, 28 Jan 2013 12:27:18 +0000 (12:27 +0000)]

Ignore generated files.

git-svn-id: https://svn.dealii.org/trunk@28177 0785d39b-7218-0410-832d-ea1e28bc413d

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Toby D. Young [Mon, 28 Jan 2013 12:25:20 +0000 (12:25 +0000)]

Simple tests for the subdivided parallelepiped.

git-svn-id: https://svn.dealii.org/trunk@28176 0785d39b-7218-0410-832d-ea1e28bc413d

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Toby D. Young [Mon, 28 Jan 2013 12:20:47 +0000 (12:20 +0000)]

Add subdivided parallelpiped, where the number of subdivisions can be equal or vary.

git-svn-id: https://svn.dealii.org/trunk@28175 0785d39b-7218-0410-832d-ea1e28bc413d

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Wolfgang Bangerth [Mon, 28 Jan 2013 01:06:46 +0000 (01:06 +0000)]

Add one more.

git-svn-id: https://svn.dealii.org/trunk@28174 0785d39b-7218-0410-832d-ea1e28bc413d

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Wolfgang Bangerth [Fri, 25 Jan 2013 19:37:21 +0000 (19:37 +0000)]

Give variables and typedefs introduced only a debug mode a smaller scope.

git-svn-id: https://svn.dealii.org/trunk@28172 0785d39b-7218-0410-832d-ea1e28bc413d

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Martin Kronbichler [Fri, 25 Jan 2013 07:23:41 +0000 (07:23 +0000)]

Make compile without P4EST

git-svn-id: https://svn.dealii.org/trunk@28171 0785d39b-7218-0410-832d-ea1e28bc413d

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Martin Kronbichler [Fri, 25 Jan 2013 06:33:56 +0000 (06:33 +0000)]

Remove use of deprecated function.

git-svn-id: https://svn.dealii.org/trunk@28170 0785d39b-7218-0410-832d-ea1e28bc413d

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Wolfgang Bangerth [Fri, 25 Jan 2013 02:24:34 +0000 (02:24 +0000)]

List one more thesis.

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Matthias Maier [Thu, 24 Jan 2013 13:12:23 +0000 (13:12 +0000)]

Allow the use of make_periodicity_constraints when running on a parallel::distributed mesh in serial

Reported by Jean-Paul Pelteret

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Timo Heister [Wed, 23 Jan 2013 16:56:28 +0000 (16:56 +0000)]

add existing instantiation to documentation

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Wolfgang Bangerth [Tue, 22 Jan 2013 20:27:26 +0000 (20:27 +0000)]

Augment documentation.

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Matthias Maier [Tue, 22 Jan 2013 19:10:31 +0000 (19:10 +0000)]

Change to warnings to "#pragma message"

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Guido Kanschat [Tue, 22 Jan 2013 15:50:45 +0000 (15:50 +0000)]

remove deprecated function calls

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Guido Kanschat [Tue, 22 Jan 2013 15:49:04 +0000 (15:49 +0000)]

remove deprecated function calls

git-svn-id: https://svn.dealii.org/trunk@28156 0785d39b-7218-0410-832d-ea1e28bc413d

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Guido Kanschat [Tue, 22 Jan 2013 15:39:44 +0000 (15:39 +0000)]

remove deprecated function calls

git-svn-id: https://svn.dealii.org/trunk@28155 0785d39b-7218-0410-832d-ea1e28bc413d

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Martin Kronbichler [Tue, 22 Jan 2013 07:24:38 +0000 (07:24 +0000)]

Remove 3D geometry where a ball boundary is laid around a single cell as this results in a non-invertible mapping.

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Wolfgang Bangerth [Tue, 22 Jan 2013 02:57:25 +0000 (02:57 +0000)]

update.

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Timo Heister [Mon, 21 Jan 2013 20:10:54 +0000 (20:10 +0000)]

fix typo

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Toby D. Young [Mon, 21 Jan 2013 17:32:13 +0000 (17:32 +0000)]

Random typo corrected.

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Martin Kronbichler [Mon, 21 Jan 2013 14:43:28 +0000 (14:43 +0000)]

Use std::memset. Fix typo in in-code comment.

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Wolfgang Bangerth [Sun, 20 Jan 2013 18:16:34 +0000 (18:16 +0000)]

More. Resort.

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Guido Kanschat [Sun, 20 Jan 2013 12:09:12 +0000 (12:09 +0000)]

Change svn web address

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Toby D. Young [Sat, 19 Jan 2013 09:32:50 +0000 (09:32 +0000)]

Fix doxygen typo.

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Wolfgang Bangerth [Fri, 18 Jan 2013 23:47:53 +0000 (23:47 +0000)]

Clarify documentation.

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Wolfgang Bangerth [Fri, 18 Jan 2013 23:11:45 +0000 (23:11 +0000)]

Add a TODO.

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Wolfgang Bangerth [Fri, 18 Jan 2013 21:39:41 +0000 (21:39 +0000)]

Work around a bug in icc13.

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Toby D. Young [Fri, 18 Jan 2013 20:27:55 +0000 (20:27 +0000)]

Resolve a couple of doxygen link warnings...

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Toby D. Young [Fri, 18 Jan 2013 19:47:05 +0000 (19:47 +0000)]

@endgroup required to remove doxygen warning.

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Toby D. Young [Fri, 18 Jan 2013 19:39:28 +0000 (19:39 +0000)]

Record the changes to SLEPcWrappers.

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Toby D. Young [Fri, 18 Jan 2013 19:35:15 +0000 (19:35 +0000)]

Update step-36 to output the number of iterations taken by the solver.

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Toby D. Young [Fri, 18 Jan 2013 19:15:48 +0000 (19:15 +0000)]

Remove and unused variable (ierr).

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Toby D. Young [Fri, 18 Jan 2013 18:38:44 +0000 (18:38 +0000)]

Improve SLEPcWrappers. Fix usage of SolverControl.

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Martin Kronbichler [Fri, 18 Jan 2013 13:58:41 +0000 (13:58 +0000)]

Replace a few deprecated functions.

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Martin Kronbichler [Fri, 18 Jan 2013 13:58:19 +0000 (13:58 +0000)]

Set the correct boundary description on the first cell. This avoids NaN entries for cell_similarity_0[78]. Adjust output.

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Wolfgang Bangerth [Fri, 18 Jan 2013 13:55:32 +0000 (13:55 +0000)]

Minor edits.

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Wolfgang Bangerth [Fri, 18 Jan 2013 13:33:05 +0000 (13:33 +0000)]

Use standard header for file.

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Martin Kronbichler [Fri, 18 Jan 2013 09:01:28 +0000 (09:01 +0000)]

Remove unused variable.

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Martin Kronbichler [Fri, 18 Jan 2013 08:27:04 +0000 (08:27 +0000)]

deal.II assumes positive volume elements.

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Martin Kronbichler [Fri, 18 Jan 2013 08:23:47 +0000 (08:23 +0000)]

Fix copy-paste issue.

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Martin Kronbichler [Fri, 18 Jan 2013 08:08:47 +0000 (08:08 +0000)]

Check that the Jacobian determinant is always positive.

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Wolfgang Bangerth [Fri, 18 Jan 2013 04:49:10 +0000 (04:49 +0000)]

Fix indentation.

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Wolfgang Bangerth [Fri, 18 Jan 2013 04:48:07 +0000 (04:48 +0000)]

Fix something that is almost certainly a bug.

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Wolfgang Bangerth [Fri, 18 Jan 2013 04:46:14 +0000 (04:46 +0000)]

Avoid use of deprecated function.

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Wolfgang Bangerth [Fri, 18 Jan 2013 04:25:34 +0000 (04:25 +0000)]

New test. Like the ILU, the test -- surprisingly -- doesn't actually show that the decomposition we compute is exact, even if we take into account *all* entries of the matrix. That appears to be a pre-existing problem, though, and one I won't investigate today.

git-svn-id: https://svn.dealii.org/trunk@28115 0785d39b-7218-0410-832d-ea1e28bc413d

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Wolfgang Bangerth [Fri, 18 Jan 2013 01:15:17 +0000 (01:15 +0000)]

Make compile.

git-svn-id: https://svn.dealii.org/trunk@28114 0785d39b-7218-0410-832d-ea1e28bc413d

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Wolfgang Bangerth [Fri, 18 Jan 2013 00:47:05 +0000 (00:47 +0000)]

Update documentation in a number of places and make a parameter a reference.

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Wolfgang Bangerth [Fri, 18 Jan 2013 00:46:05 +0000 (00:46 +0000)]

Add a note.

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Wolfgang Bangerth [Thu, 17 Jan 2013 23:51:44 +0000 (23:51 +0000)]

More.

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Wolfgang Bangerth [Thu, 17 Jan 2013 19:55:06 +0000 (19:55 +0000)]

Yet one more.

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Timo Heister [Thu, 17 Jan 2013 18:37:46 +0000 (18:37 +0000)]

clean up test output, higher accuracy in output

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Wolfgang Bangerth [Thu, 17 Jan 2013 17:03:31 +0000 (17:03 +0000)]

One more.

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Wolfgang Bangerth [Thu, 17 Jan 2013 16:22:38 +0000 (16:22 +0000)]

Minor code cleanups.

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Wolfgang Bangerth [Thu, 17 Jan 2013 16:18:45 +0000 (16:18 +0000)]

Adjust the test so that mesh refinement no longer depends on an estimated error. We had problems where this test produced different meshes on different machines.

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Wolfgang Bangerth [Thu, 17 Jan 2013 16:14:24 +0000 (16:14 +0000)]

Remove one test. The tested function is, in principle, useful, but its results are not numerically stable and so it's hard to have a verifiable test for it.

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Wolfgang Bangerth [Thu, 17 Jan 2013 16:11:15 +0000 (16:11 +0000)]

Adjust output for one test.

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Wolfgang Bangerth [Thu, 17 Jan 2013 15:50:11 +0000 (15:50 +0000)]

Exhaustively test one function that previously wasn't tested. As always if one does so there are bugs to be found.

git-svn-id: https://svn.dealii.org/trunk@28099 0785d39b-7218-0410-832d-ea1e28bc413d

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