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https://gitweb.dealii.org/ - dealii-svn.git/log
heltai [Thu, 5 Jun 2014 07:37:45 +0000 (07:37 +0000)]
Merged from trunk r32444 through r33019.
git-svn-id: https://svn.dealii.org/branches/branch_manifold_id_intermediate@33020
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heltai [Fri, 16 May 2014 12:31:17 +0000 (12:31 +0000)]
Merged r32862 through r32923 from trunk.
git-svn-id: https://svn.dealii.org/branches/branch_manifold_id_intermediate@32924
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heltai [Wed, 30 Apr 2014 07:56:04 +0000 (07:56 +0000)]
Merged from trunk r32444 through r32861.
git-svn-id: https://svn.dealii.org/branches/branch_manifold_id_intermediate@32862
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heltai [Tue, 22 Apr 2014 14:44:02 +0000 (14:44 +0000)]
Merged from trunk r32781 through r32805.
git-svn-id: https://svn.dealii.org/branches/branch_manifold_id_intermediate@32806
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heltai [Wed, 16 Apr 2014 10:04:55 +0000 (10:04 +0000)]
Merged from trunk r32444 through r32780.
git-svn-id: https://svn.dealii.org/branches/branch_manifold_id_intermediate@32781
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heltai [Sun, 13 Apr 2014 14:20:06 +0000 (14:20 +0000)]
Merged r32444 through r32769 from trunk.
git-svn-id: https://svn.dealii.org/branches/branch_manifold_id_intermediate@32770
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heltai [Fri, 11 Apr 2014 13:03:21 +0000 (13:03 +0000)]
Merged from trunk r32657 through r32762
git-svn-id: https://svn.dealii.org/branches/branch_manifold_id_intermediate@32766
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heltai [Sat, 15 Mar 2014 11:46:16 +0000 (11:46 +0000)]
Merged from trunk
git-svn-id: https://svn.dealii.org/branches/branch_manifold_id_intermediate@32657
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heltai [Mon, 10 Feb 2014 17:50:30 +0000 (17:50 +0000)]
Fixed codimension one bug in manifold case.
git-svn-id: https://svn.dealii.org/branches/branch_manifold_id_intermediate@32449
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heltai [Mon, 10 Feb 2014 15:48:26 +0000 (15:48 +0000)]
Replaced all tria.get_boundary(OBJ-\>boundary_id) with OBJ-\>get_boundary()
git-svn-id: https://svn.dealii.org/branches/branch_manifold_id_intermediate@32448
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heltai [Mon, 10 Feb 2014 15:28:44 +0000 (15:28 +0000)]
Compiling intermediate branch manifold id
git-svn-id: https://svn.dealii.org/branches/branch_manifold_id_intermediate@32447
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heltai [Mon, 10 Feb 2014 14:18:19 +0000 (14:18 +0000)]
Rough fix. Not compiling.
git-svn-id: https://svn.dealii.org/branches/branch_manifold_id_intermediate@32445
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heltai [Mon, 10 Feb 2014 13:11:45 +0000 (13:11 +0000)]
Added an intermediate branch for manifold_id. In this branch I only
split manifold_ids from boundary_ids, and leave alone the entire
interface of the Boundary<dim,spacedim> class, since this is
creating way too much noise in the testsuite.
git-svn-id: https://svn.dealii.org/branches/branch_manifold_id_intermediate@32443
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ryan.grove [Mon, 10 Feb 2014 01:59:13 +0000 (01:59 +0000)]
Fixed typos in step-2 tutorial, step-6.cc, and to the Function< dim > documentation.
git-svn-id: https://svn.dealii.org/trunk@32442
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kronbichler [Sun, 9 Feb 2014 19:39:01 +0000 (19:39 +0000)]
Avoid warning
git-svn-id: https://svn.dealii.org/trunk@32441
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kronbichler [Sun, 9 Feb 2014 19:21:02 +0000 (19:21 +0000)]
Also free vector memory from deal.II's own parallel vectors.
git-svn-id: https://svn.dealii.org/trunk@32440
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bangerth [Sat, 8 Feb 2014 14:56:53 +0000 (14:56 +0000)]
Fix odd markup.
git-svn-id: https://svn.dealii.org/trunk@32439
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bangerth [Sat, 8 Feb 2014 13:56:26 +0000 (13:56 +0000)]
Make DerivativeApproximation a namespace, rather than a class with all static members.
git-svn-id: https://svn.dealii.org/trunk@32438
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bangerth [Fri, 7 Feb 2014 23:01:40 +0000 (23:01 +0000)]
Remove dealii::swap(SmartPointer,SmartPointer) for MS VC++. It apparently only leads to confusion but isn't even strictly necessary.
git-svn-id: https://svn.dealii.org/trunk@32437
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bangerth [Fri, 7 Feb 2014 22:55:20 +0000 (22:55 +0000)]
Rewrite a piece of code in hopes of making it easier on MS VC++.
git-svn-id: https://svn.dealii.org/trunk@32436
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kronbichler [Fri, 7 Feb 2014 12:52:34 +0000 (12:52 +0000)]
Silence compiler warning
git-svn-id: https://svn.dealii.org/trunk@32430
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bangerth [Fri, 7 Feb 2014 01:05:06 +0000 (01:05 +0000)]
Provide ThreadLocalStorage::clear().
git-svn-id: https://svn.dealii.org/trunk@32429
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bangerth [Fri, 7 Feb 2014 01:04:47 +0000 (01:04 +0000)]
Provide ThreadLocalStorage::clear().
git-svn-id: https://svn.dealii.org/trunk@32428
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heister [Thu, 6 Feb 2014 20:43:46 +0000 (20:43 +0000)]
fix typo
git-svn-id: https://svn.dealii.org/trunk@32426
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bangerth [Thu, 6 Feb 2014 16:44:02 +0000 (16:44 +0000)]
Remove stray typename.
git-svn-id: https://svn.dealii.org/trunk@32423
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heister [Thu, 6 Feb 2014 16:18:43 +0000 (16:18 +0000)]
run test only if we have tbb
git-svn-id: https://svn.dealii.org/trunk@32421
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heister [Thu, 6 Feb 2014 16:17:55 +0000 (16:17 +0000)]
add multithreaded function_parser test
git-svn-id: https://svn.dealii.org/trunk@32420
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heister [Thu, 6 Feb 2014 16:17:10 +0000 (16:17 +0000)]
fix tbb quicktest
git-svn-id: https://svn.dealii.org/trunk@32419
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heister [Thu, 6 Feb 2014 14:51:04 +0000 (14:51 +0000)]
add another test for FunctionParser
git-svn-id: https://svn.dealii.org/trunk@32418
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maier [Thu, 6 Feb 2014 01:03:21 +0000 (01:03 +0000)]
CMake: Bugfix
git-svn-id: https://svn.dealii.org/trunk@32416
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heister [Wed, 5 Feb 2014 20:35:58 +0000 (20:35 +0000)]
update affinity quicktest to work with 1 cpu and on mac
git-svn-id: https://svn.dealii.org/trunk@32415
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maier [Wed, 5 Feb 2014 18:21:11 +0000 (18:21 +0000)]
Quicktests: Use mpirun configured by FindMPI.cmake instead of generic "mpirun -n"
git-svn-id: https://svn.dealii.org/trunk@32414
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bangerth [Wed, 5 Feb 2014 17:19:04 +0000 (17:19 +0000)]
Try to work around a bug in MS VC++. This is not pretty, but if it gets the job done I'm ok with it.
git-svn-id: https://svn.dealii.org/trunk@32413
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bangerth [Wed, 5 Feb 2014 16:57:35 +0000 (16:57 +0000)]
Hopefully make MS VC++'s life a bit easier. Also leave a note in the documentation in a couple of places.
git-svn-id: https://svn.dealii.org/trunk@32412
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maier [Wed, 5 Feb 2014 10:43:56 +0000 (10:43 +0000)]
CMake: Bugfix: Add header to quick_tests. Closes bug 185.
git-svn-id: https://svn.dealii.org/trunk@32411
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bangerth [Tue, 4 Feb 2014 22:26:40 +0000 (22:26 +0000)]
Get the list of friends of a class right after a recent change.
git-svn-id: https://svn.dealii.org/trunk@32410
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bangerth [Tue, 4 Feb 2014 21:59:19 +0000 (21:59 +0000)]
Do not qualify an element in its own namespace.
git-svn-id: https://svn.dealii.org/trunk@32409
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bangerth [Tue, 4 Feb 2014 21:58:54 +0000 (21:58 +0000)]
Use the correct include file.
git-svn-id: https://svn.dealii.org/trunk@32408
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bangerth [Tue, 4 Feb 2014 21:45:30 +0000 (21:45 +0000)]
Reduce template contortion level by one in hopes that this helps MS VC++.
git-svn-id: https://svn.dealii.org/trunk@32407
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bangerth [Tue, 4 Feb 2014 21:44:57 +0000 (21:44 +0000)]
Pass array by reference instead of by value. This should also help MS VC++ which doesn't like the situation as is.
git-svn-id: https://svn.dealii.org/trunk@32406
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bangerth [Tue, 4 Feb 2014 21:31:42 +0000 (21:31 +0000)]
Make the spelling of 'lda' and 'level_dof_access' uniform between dof_accessor.h and .templates.h. Help MS VC++ by introducing a typedef rather than trying to be overly tricky with the return type of the face() function.
git-svn-id: https://svn.dealii.org/trunk@32405
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heister [Tue, 4 Feb 2014 20:17:15 +0000 (20:17 +0000)]
add test for GridTools::transform
git-svn-id: https://svn.dealii.org/trunk@32404
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maier [Tue, 4 Feb 2014 18:57:07 +0000 (18:57 +0000)]
CMake: Fix a configuration error on Debian Testing wrt. libSuiteSparse_config.a
git-svn-id: https://svn.dealii.org/trunk@32403
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heister [Tue, 4 Feb 2014 18:43:20 +0000 (18:43 +0000)]
make GridTools::transform work with hanging nodes
git-svn-id: https://svn.dealii.org/trunk@32402
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young [Tue, 4 Feb 2014 11:42:15 +0000 (11:42 +0000)]
Remove code duplication.
git-svn-id: https://svn.dealii.org/trunk@32401
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young [Tue, 4 Feb 2014 11:27:44 +0000 (11:27 +0000)]
Test PETSc FullMatrix reinit function.
git-svn-id: https://svn.dealii.org/trunk@32400
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bangerth [Mon, 3 Feb 2014 21:01:26 +0000 (21:01 +0000)]
Generalize test.
git-svn-id: https://svn.dealii.org/trunk@32397
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bangerth [Mon, 3 Feb 2014 19:43:22 +0000 (19:43 +0000)]
Remove a piece of debug code.
git-svn-id: https://svn.dealii.org/trunk@32396
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bangerth [Mon, 3 Feb 2014 19:41:25 +0000 (19:41 +0000)]
One more test for curls.
git-svn-id: https://svn.dealii.org/trunk@32395
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bangerth [Mon, 3 Feb 2014 17:06:24 +0000 (17:06 +0000)]
Fix a bug reported by Christoph Heiniger (including a description of how it should be fixed): The computation of curls was wrong.
git-svn-id: https://svn.dealii.org/trunk@32394
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heister [Mon, 3 Feb 2014 16:25:32 +0000 (16:25 +0000)]
fix example code that trips up doxygen
git-svn-id: https://svn.dealii.org/trunk@32393
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bangerth [Mon, 3 Feb 2014 15:40:53 +0000 (15:40 +0000)]
Minor adjustments for style and in hopes of getting MS VC++ to like the file better than it used to.
git-svn-id: https://svn.dealii.org/trunk@32391
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bangerth [Mon, 3 Feb 2014 14:58:05 +0000 (14:58 +0000)]
Avoid what I believe is an unnecessary '::template ' in hopes that it makes MS VC++ happier.
git-svn-id: https://svn.dealii.org/trunk@32389
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heister [Mon, 3 Feb 2014 14:50:28 +0000 (14:50 +0000)]
formatting
git-svn-id: https://svn.dealii.org/trunk@32388
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heister [Mon, 3 Feb 2014 14:49:44 +0000 (14:49 +0000)]
add publication
git-svn-id: https://svn.dealii.org/trunk@32387
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kronbichler [Mon, 3 Feb 2014 14:41:54 +0000 (14:41 +0000)]
Refill comments
git-svn-id: https://svn.dealii.org/trunk@32386
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kronbichler [Mon, 3 Feb 2014 14:32:10 +0000 (14:32 +0000)]
Introduce mmult and second factorization routine.
git-svn-id: https://svn.dealii.org/trunk@32385
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bangerth [Mon, 3 Feb 2014 14:24:09 +0000 (14:24 +0000)]
DataOutBase no longer is a class.
git-svn-id: https://svn.dealii.org/trunk@32384
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kanschat [Sun, 2 Feb 2014 22:41:39 +0000 (22:41 +0000)]
add weighted mass matrix
git-svn-id: https://svn.dealii.org/trunk@32381
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kanschat [Sun, 2 Feb 2014 22:41:20 +0000 (22:41 +0000)]
add functions for clearing and initializing an MGTransferPrebuilt object
git-svn-id: https://svn.dealii.org/trunk@32380
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kanschat [Sun, 2 Feb 2014 22:40:45 +0000 (22:40 +0000)]
Newton::threshold() was missing
git-svn-id: https://svn.dealii.org/trunk@32379
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bangerth [Sun, 2 Feb 2014 21:53:39 +0000 (21:53 +0000)]
Help MS VC++ recognize which template function to take.
git-svn-id: https://svn.dealii.org/trunk@32378
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bangerth [Sun, 2 Feb 2014 20:53:38 +0000 (20:53 +0000)]
Complete specify namespace for a symbol to help MS VC++.
git-svn-id: https://svn.dealii.org/trunk@32377
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bangerth [Sun, 2 Feb 2014 19:37:02 +0000 (19:37 +0000)]
Address a few follow-up issues with the previous patches.
git-svn-id: https://svn.dealii.org/trunk@32376
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bangerth [Sun, 2 Feb 2014 19:05:08 +0000 (19:05 +0000)]
More conversions from class to namespace DataOutBase. Reindent these files.
git-svn-id: https://svn.dealii.org/trunk@32375
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maier [Sun, 2 Feb 2014 11:39:36 +0000 (11:39 +0000)]
Bugfixes: Make compilation of bundled libraries work again
git-svn-id: https://svn.dealii.org/trunk@32374
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maier [Sun, 2 Feb 2014 00:31:01 +0000 (00:31 +0000)]
I have no idea where this cache invalidation comes from - disable for now
git-svn-id: https://svn.dealii.org/trunk@32373
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maier [Sun, 2 Feb 2014 00:10:11 +0000 (00:10 +0000)]
CMake: Bugfix: Get the caching right in FindPETSC.cmake and
FindTRILINOS.cmake
git-svn-id: https://svn.dealii.org/trunk@32372
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maier [Sat, 1 Feb 2014 21:58:11 +0000 (21:58 +0000)]
Well, well. Also adjust the project configuration...
git-svn-id: https://svn.dealii.org/trunk@32371
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maier [Sat, 1 Feb 2014 21:53:31 +0000 (21:53 +0000)]
CMake: Break everything (tm)
- Provide a quick sanity check to test the final link interface.
git-svn-id: https://svn.dealii.org/trunk@32370
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maier [Sat, 1 Feb 2014 21:53:29 +0000 (21:53 +0000)]
CMake: Break everything (tm)
- Do not record full path of system libraries and use reduced link line
instead.
git-svn-id: https://svn.dealii.org/trunk@32369
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maier [Sat, 1 Feb 2014 21:53:24 +0000 (21:53 +0000)]
CMake: Break everything (tm).
- Redesign complete feature configuration process
git-svn-id: https://svn.dealii.org/trunk@32368
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bangerth [Sat, 1 Feb 2014 13:18:44 +0000 (13:18 +0000)]
Remove the awkward private inheritance from DataOutBase to DataOutInterface that has tripped up virtually every compiler we have ever tried. Instead, make DataOutBase a namespace.
git-svn-id: https://svn.dealii.org/trunk@32367
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kronbichler [Sat, 1 Feb 2014 08:16:52 +0000 (08:16 +0000)]
Mark new functions in header file as inline
git-svn-id: https://svn.dealii.org/trunk@32365
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steigemann [Sat, 1 Feb 2014 08:04:39 +0000 (08:04 +0000)]
new tests for ParameterHandler print_parameters_section
git-svn-id: https://svn.dealii.org/trunk@32364
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steigemann [Sat, 1 Feb 2014 07:57:30 +0000 (07:57 +0000)]
added a new flag to ParameterHandler::print_parameters_section for printing all higher subsection elements needed for XML output
git-svn-id: https://svn.dealii.org/trunk@32363
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kronbichler [Fri, 31 Jan 2014 20:07:22 +0000 (20:07 +0000)]
Make compile again
git-svn-id: https://svn.dealii.org/trunk@32362
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kronbichler [Fri, 31 Jan 2014 20:03:54 +0000 (20:03 +0000)]
Add tests
git-svn-id: https://svn.dealii.org/trunk@32361
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bangerth [Fri, 31 Jan 2014 19:44:13 +0000 (19:44 +0000)]
Make all instances of a template a friend function, in hopes to make
MS VC++ happy.
git-svn-id: https://svn.dealii.org/trunk@32360
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kronbichler [Fri, 31 Jan 2014 19:05:03 +0000 (19:05 +0000)]
Better way for specifying deal.II namespace.
git-svn-id: https://svn.dealii.org/trunk@32359
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kronbichler [Fri, 31 Jan 2014 19:03:37 +0000 (19:03 +0000)]
Add similar interface for copying from a Trilinos MPI vector as for Petsc.
git-svn-id: https://svn.dealii.org/trunk@32358
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kronbichler [Fri, 31 Jan 2014 14:11:14 +0000 (14:11 +0000)]
Add test
git-svn-id: https://svn.dealii.org/trunk@32357
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heister [Fri, 31 Jan 2014 14:05:39 +0000 (14:05 +0000)]
avoid fmin with unsigned int because it is not defined for ints before c++11
git-svn-id: https://svn.dealii.org/trunk@32356
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kronbichler [Fri, 31 Jan 2014 13:24:30 +0000 (13:24 +0000)]
Patch by Ben Thompson: copy petsc vector to deal.II parallel distributed vector
git-svn-id: https://svn.dealii.org/trunk@32355
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kronbichler [Fri, 31 Jan 2014 07:33:59 +0000 (07:33 +0000)]
Prior to C++11, fmax is a C99 function and not in namespace std
git-svn-id: https://svn.dealii.org/trunk@32354
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kronbichler [Fri, 31 Jan 2014 07:20:16 +0000 (07:20 +0000)]
Prior to C++11, fmin is a C99 function and not in namespace std
git-svn-id: https://svn.dealii.org/trunk@32353
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bangerth [Fri, 31 Jan 2014 03:34:47 +0000 (03:34 +0000)]
Add tests for bug report #182. At least the _28 test doesn't currently work and I will get to it over the weekend at the latest.
git-svn-id: https://svn.dealii.org/trunk@32352
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turcksin [Fri, 31 Jan 2014 01:32:15 +0000 (01:32 +0000)]
Add a const in sparse_matrix.h and an include in sparsity_tools.cc to help Visual Studio.
git-svn-id: https://svn.dealii.org/trunk@32351
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turcksin [Fri, 31 Jan 2014 00:04:32 +0000 (00:04 +0000)]
Add several typenames and change min to fmin, max to fmax to help Visual Studio.
git-svn-id: https://svn.dealii.org/trunk@32350
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bangerth [Thu, 30 Jan 2014 23:08:09 +0000 (23:08 +0000)]
Look through the documentation at a couple of places.
git-svn-id: https://svn.dealii.org/trunk@32349
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bangerth [Thu, 30 Jan 2014 21:53:29 +0000 (21:53 +0000)]
Link to another paper on best practices, as well as the video lectures.
git-svn-id: https://svn.dealii.org/trunk@32348
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bangerth [Thu, 30 Jan 2014 17:23:49 +0000 (17:23 +0000)]
Add a few statements on running stuff in parallel with MPI.
git-svn-id: https://svn.dealii.org/trunk@32347
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bangerth [Wed, 29 Jan 2014 16:38:51 +0000 (16:38 +0000)]
Initialize a variable and explain it.
git-svn-id: https://svn.dealii.org/trunk@32345
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bangerth [Wed, 29 Jan 2014 12:53:51 +0000 (12:53 +0000)]
Add last name of contributor Mihai.
git-svn-id: https://svn.dealii.org/trunk@32344
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maier [Tue, 28 Jan 2014 19:01:32 +0000 (19:01 +0000)]
CMake: Start refactoring of REGISTER_FEATURE
git-svn-id: https://svn.dealii.org/trunk@32339
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maier [Tue, 28 Jan 2014 19:01:29 +0000 (19:01 +0000)]
CMake: Refactor detailed and summary log creation
git-svn-id: https://svn.dealii.org/trunk@32338
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heister [Tue, 28 Jan 2014 19:00:20 +0000 (19:00 +0000)]
step-1: add some text output to the screen
git-svn-id: https://svn.dealii.org/trunk@32337
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maier [Tue, 28 Jan 2014 18:58:22 +0000 (18:58 +0000)]
CMake: Refactor list deduplication into a macro
git-svn-id: https://svn.dealii.org/trunk@32336
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maier [Tue, 28 Jan 2014 13:29:02 +0000 (13:29 +0000)]
Testsuite: Bugfix: Do not copy CMakeCache.txt and CMakeFiles for build tests
git-svn-id: https://svn.dealii.org/trunk@32332
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felix.gruber [Tue, 28 Jan 2014 09:35:21 +0000 (09:35 +0000)]
fix indentation
git-svn-id: https://svn.dealii.org/trunk@32330
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