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https://gitweb.dealii.org/ - dealii-svn.git/log
heister [Mon, 22 Jul 2013 21:28:52 +0000 (21:28 +0000)]
update version information
git-svn-id: https://svn.dealii.org/trunk@30110
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heister [Mon, 22 Jul 2013 21:25:02 +0000 (21:25 +0000)]
release step: 1, adjust changes
git-svn-id: https://svn.dealii.org/trunk@30108
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bangerth [Mon, 22 Jul 2013 21:24:52 +0000 (21:24 +0000)]
Comment out link to recent changes.
git-svn-id: https://svn.dealii.org/trunk@30107
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bangerth [Mon, 22 Jul 2013 21:23:43 +0000 (21:23 +0000)]
Announce 8.0.
git-svn-id: https://svn.dealii.org/trunk@30106
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bangerth [Mon, 22 Jul 2013 20:48:39 +0000 (20:48 +0000)]
Several more.
git-svn-id: https://svn.dealii.org/trunk@30105
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heister [Mon, 22 Jul 2013 20:28:28 +0000 (20:28 +0000)]
add funroll-all-loops if using gcc
git-svn-id: https://svn.dealii.org/trunk@30104
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maier [Mon, 22 Jul 2013 19:35:24 +0000 (19:35 +0000)]
CMake: A small workaround
git-svn-id: https://svn.dealii.org/trunk@30103
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bangerth [Mon, 22 Jul 2013 19:21:43 +0000 (19:21 +0000)]
New test. Currently fails, but clearly demonstrates the problem. The 'generic' output file has been verified to be correct.
git-svn-id: https://svn.dealii.org/trunk@30102
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bangerth [Mon, 22 Jul 2013 19:21:14 +0000 (19:21 +0000)]
Fix the current failure of the various dof_test_21_b variants.
git-svn-id: https://svn.dealii.org/trunk@30101
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bangerth [Mon, 22 Jul 2013 18:35:56 +0000 (18:35 +0000)]
New tests. The outputs have been verified to be correct and have been generated with r29524, which is correct.
git-svn-id: https://svn.dealii.org/trunk@30100
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bangerth [Mon, 22 Jul 2013 18:12:40 +0000 (18:12 +0000)]
Remove unused variable.
git-svn-id: https://svn.dealii.org/trunk@30099
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bangerth [Mon, 22 Jul 2013 18:11:42 +0000 (18:11 +0000)]
Remove unused variable.
git-svn-id: https://svn.dealii.org/trunk@30098
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bangerth [Mon, 22 Jul 2013 15:28:27 +0000 (15:28 +0000)]
Set optimization flags for ICC to -O1 in accordance with the findings
here: http://code.google.com/p/dealii/issues/detail?id=30 . We may
revisit the issue at a later time, but for the moment this is the safe
approach.
git-svn-id: https://svn.dealii.org/trunk@30097
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bangerth [Mon, 22 Jul 2013 15:18:35 +0000 (15:18 +0000)]
Adjust output that differs by round-off.
git-svn-id: https://svn.dealii.org/trunk@30096
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heister [Mon, 22 Jul 2013 13:52:46 +0000 (13:52 +0000)]
add publication
git-svn-id: https://svn.dealii.org/trunk@30095
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heister [Mon, 22 Jul 2013 13:50:37 +0000 (13:50 +0000)]
add publication
git-svn-id: https://svn.dealii.org/trunk@30094
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bangerth [Mon, 22 Jul 2013 12:56:52 +0000 (12:56 +0000)]
Avoid filling a map with numeric_limit<types::boundary_id>::max() elements -- too many if we ever increase the number of bits in boundary_id.
git-svn-id: https://svn.dealii.org/trunk@30093
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bangerth [Mon, 22 Jul 2013 12:44:57 +0000 (12:44 +0000)]
Fix a bug.
git-svn-id: https://svn.dealii.org/trunk@30092
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kronbichler [Mon, 22 Jul 2013 12:15:19 +0000 (12:15 +0000)]
Adjust output
git-svn-id: https://svn.dealii.org/trunk@30091
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kronbichler [Mon, 22 Jul 2013 09:43:59 +0000 (09:43 +0000)]
Fix global_dof_index in matrix-free class: It should only be used when dealing with deal.II's global dof indices, not the matrix-free dof indices which are transformed into a process-local index space and start at zero on all processors. This limits the MPI-local problem size to 4 billion, but i) that limit is still far away and ii) there were many internal uses of unsigned int left that would have needed re-organization. This change saves memory as dof indices can be saved in 32-bit integer instead of 64-bit integers and still allows problems with >4g global dofs.
git-svn-id: https://svn.dealii.org/trunk@30090
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kronbichler [Mon, 22 Jul 2013 09:38:03 +0000 (09:38 +0000)]
Prettify output
git-svn-id: https://svn.dealii.org/trunk@30089
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kronbichler [Mon, 22 Jul 2013 06:07:51 +0000 (06:07 +0000)]
Remove stray typename
git-svn-id: https://svn.dealii.org/trunk@30088
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kronbichler [Mon, 22 Jul 2013 06:03:33 +0000 (06:03 +0000)]
Simplify test case
git-svn-id: https://svn.dealii.org/trunk@30087
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bangerth [Mon, 22 Jul 2013 02:58:54 +0000 (02:58 +0000)]
Implement VectorTools::project also for hp::DoFHandler. This required refactoring a whole bunch of other functions as well, as well as a good number of additional instantiations.
git-svn-id: https://svn.dealii.org/trunk@30086
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bangerth [Mon, 22 Jul 2013 02:46:30 +0000 (02:46 +0000)]
Fix disabling bug in hp::DoFHandler::n_boundary_dofs().
git-svn-id: https://svn.dealii.org/trunk@30085
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bangerth [Mon, 22 Jul 2013 01:59:20 +0000 (01:59 +0000)]
Put the cheap condition first in a conditional.
git-svn-id: https://svn.dealii.org/trunk@30084
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bangerth [Sun, 21 Jul 2013 23:56:00 +0000 (23:56 +0000)]
Update comment to match what we are currently doing.
git-svn-id: https://svn.dealii.org/trunk@30083
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heister [Sun, 21 Jul 2013 23:47:29 +0000 (23:47 +0000)]
revert to iterating back-wards which was changed in r30061 and broke a couple of tests (I don't understand why exactly though)
git-svn-id: https://svn.dealii.org/trunk@30082
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heister [Sun, 21 Jul 2013 23:45:46 +0000 (23:45 +0000)]
more publicatoins
git-svn-id: https://svn.dealii.org/trunk@30081
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bangerth [Sun, 21 Jul 2013 22:56:58 +0000 (22:56 +0000)]
Provide the same comments for begin_active/end_active as for the other DoFHandler and Triangulation.
git-svn-id: https://svn.dealii.org/trunk@30080
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heister [Sun, 21 Jul 2013 22:35:18 +0000 (22:35 +0000)]
add publications (and remove preprints)
git-svn-id: https://svn.dealii.org/trunk@30079
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maier [Sat, 20 Jul 2013 12:35:01 +0000 (12:35 +0000)]
Remove test_affinity from the build system for now until we have a final design decision ;-)
git-svn-id: https://svn.dealii.org/trunk@30078
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bangerth [Sat, 20 Jul 2013 12:07:47 +0000 (12:07 +0000)]
Also avoid a potentially endless loop. Fix typo.
git-svn-id: https://svn.dealii.org/trunk@30077
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bangerth [Sat, 20 Jul 2013 12:07:03 +0000 (12:07 +0000)]
Fix a thinko.
git-svn-id: https://svn.dealii.org/trunk@30076
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bangerth [Sat, 20 Jul 2013 11:56:00 +0000 (11:56 +0000)]
Add appropriate header file.
git-svn-id: https://svn.dealii.org/trunk@30075
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maier [Sat, 20 Jul 2013 08:31:48 +0000 (08:31 +0000)]
CMake: Make sure to compile test_affinity.cc correctly
git-svn-id: https://svn.dealii.org/trunk@30074
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maier [Sat, 20 Jul 2013 08:25:44 +0000 (08:25 +0000)]
add test_affinity program, refactor slightly
git-svn-id: https://svn.dealii.org/trunk@30073
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maier [Fri, 19 Jul 2013 23:16:27 +0000 (23:16 +0000)]
Update Author for step-49
git-svn-id: https://svn.dealii.org/trunk@30072
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heister [Fri, 19 Jul 2013 21:48:50 +0000 (21:48 +0000)]
update petsc/trilinos documentation
git-svn-id: https://svn.dealii.org/trunk@30071
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bangerth [Fri, 19 Jul 2013 21:24:05 +0000 (21:24 +0000)]
Remove instructions on how to apply this license to a project.
git-svn-id: https://svn.dealii.org/trunk@30070
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heister [Fri, 19 Jul 2013 21:20:05 +0000 (21:20 +0000)]
update readme
git-svn-id: https://svn.dealii.org/trunk@30069
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koecher [Fri, 19 Jul 2013 21:11:36 +0000 (21:11 +0000)]
corrected misspelling of development in several cases (was spelled as develpment) for doc/readme.html
git-svn-id: https://svn.dealii.org/trunk@30068
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bangerth [Fri, 19 Jul 2013 21:03:41 +0000 (21:03 +0000)]
Update slightly. Avoid the circular references to the FAQ and back.
git-svn-id: https://svn.dealii.org/trunk@30067
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bangerth [Fri, 19 Jul 2013 21:01:06 +0000 (21:01 +0000)]
Add a sentence.
git-svn-id: https://svn.dealii.org/trunk@30066
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bangerth [Fri, 19 Jul 2013 19:24:22 +0000 (19:24 +0000)]
New test.
git-svn-id: https://svn.dealii.org/trunk@30065
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bangerth [Fri, 19 Jul 2013 19:13:40 +0000 (19:13 +0000)]
Work around the removal of a couple of functions in Triangulation.
git-svn-id: https://svn.dealii.org/trunk@30064
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bangerth [Fri, 19 Jul 2013 19:05:27 +0000 (19:05 +0000)]
Yea, this code wasn't tested :-(
git-svn-id: https://svn.dealii.org/trunk@30063
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heister [Fri, 19 Jul 2013 18:58:33 +0000 (18:58 +0000)]
add publication
git-svn-id: https://svn.dealii.org/trunk@30062
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bangerth [Fri, 19 Jul 2013 16:18:48 +0000 (16:18 +0000)]
Remove last_active(level) and last(level), as suggested by bug report 2.
git-svn-id: https://svn.dealii.org/trunk@30061
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bangerth [Fri, 19 Jul 2013 16:04:26 +0000 (16:04 +0000)]
Augment documentation.
git-svn-id: https://svn.dealii.org/trunk@30060
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bangerth [Fri, 19 Jul 2013 16:04:06 +0000 (16:04 +0000)]
Minor cleanup. The initialization of ring buffer elements is now no longer expensive.
git-svn-id: https://svn.dealii.org/trunk@30059
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heister [Fri, 19 Jul 2013 15:39:29 +0000 (15:39 +0000)]
add citations
git-svn-id: https://svn.dealii.org/trunk@30058
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kanschat [Fri, 19 Jul 2013 15:26:27 +0000 (15:26 +0000)]
add documentation of Algorithms namespace
git-svn-id: https://svn.dealii.org/trunk@30057
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heister [Fri, 19 Jul 2013 15:03:38 +0000 (15:03 +0000)]
update authors
git-svn-id: https://svn.dealii.org/trunk@30056
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heister [Fri, 19 Jul 2013 15:02:48 +0000 (15:02 +0000)]
remove duplicate entry in changelog
git-svn-id: https://svn.dealii.org/trunk@30055
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maier [Fri, 19 Jul 2013 07:40:42 +0000 (07:40 +0000)]
Resolve a compilation issue with bundled boost compiled with clang or icc
git-svn-id: https://svn.dealii.org/trunk@30054
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maier [Thu, 18 Jul 2013 21:38:49 +0000 (21:38 +0000)]
Fix wrong indentations. *sigh* astyle is not stable wrt version numbers.
git-svn-id: https://svn.dealii.org/trunk@30053
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maier [Thu, 18 Jul 2013 20:22:13 +0000 (20:22 +0000)]
CMake: Adjust comment width
git-svn-id: https://svn.dealii.org/trunk@30052
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maier [Thu, 18 Jul 2013 20:09:50 +0000 (20:09 +0000)]
Check in the shell script for the license replacement
git-svn-id: https://svn.dealii.org/trunk@30051
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maier [Thu, 18 Jul 2013 20:03:31 +0000 (20:03 +0000)]
Update the licencse headers for the example steps as well
git-svn-id: https://svn.dealii.org/trunk@30050
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maier [Thu, 18 Jul 2013 19:42:40 +0000 (19:42 +0000)]
Process a whole bunch of remaining copyright notices
git-svn-id: https://svn.dealii.org/trunk@30049
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maier [Thu, 18 Jul 2013 19:42:36 +0000 (19:42 +0000)]
Don't forget some header files as well...
git-svn-id: https://svn.dealii.org/trunk@30048
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kanschat [Thu, 18 Jul 2013 19:39:29 +0000 (19:39 +0000)]
adjusting script
git-svn-id: https://svn.dealii.org/trunk@30047
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bangerth [Thu, 18 Jul 2013 19:31:32 +0000 (19:31 +0000)]
Replace TIME_UTC by TIME_UTC_ as suggested in bug report 64 (https://code.google.com/p/dealii/issues/detail?id=64#makechanges) and the linked to report at https://svn.boost.org/trac/boost/ticket/6940 .
git-svn-id: https://svn.dealii.org/trunk@30046
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maier [Thu, 18 Jul 2013 19:18:00 +0000 (19:18 +0000)]
Run the reindent script on the complete test suite
git-svn-id: https://svn.dealii.org/trunk@30045
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maier [Thu, 18 Jul 2013 19:13:49 +0000 (19:13 +0000)]
Replace headers in tests, too
git-svn-id: https://svn.dealii.org/trunk@30044
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heister [Thu, 18 Jul 2013 19:03:59 +0000 (19:03 +0000)]
fix many warnings in tests
git-svn-id: https://svn.dealii.org/trunk@30043
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heister [Thu, 18 Jul 2013 19:02:53 +0000 (19:02 +0000)]
fix compile error in FilteredIterator introduced by change in TriaIterators
git-svn-id: https://svn.dealii.org/trunk@30042
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bangerth [Thu, 18 Jul 2013 18:12:12 +0000 (18:12 +0000)]
Restructure slightly.
git-svn-id: https://svn.dealii.org/trunk@30041
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maier [Thu, 18 Jul 2013 17:06:48 +0000 (17:06 +0000)]
Run the fierce autoindent script
git-svn-id: https://svn.dealii.org/trunk@30040
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maier [Thu, 18 Jul 2013 17:00:05 +0000 (17:00 +0000)]
Fix an include...
git-svn-id: https://svn.dealii.org/trunk@30039
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maier [Thu, 18 Jul 2013 16:55:44 +0000 (16:55 +0000)]
Update the stuff under contrib as well
git-svn-id: https://svn.dealii.org/trunk@30038
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maier [Thu, 18 Jul 2013 16:55:40 +0000 (16:55 +0000)]
Update License Headers in Source files
git-svn-id: https://svn.dealii.org/trunk@30037
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maier [Thu, 18 Jul 2013 16:55:32 +0000 (16:55 +0000)]
Update license headers in header files
git-svn-id: https://svn.dealii.org/trunk@30036
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maier [Thu, 18 Jul 2013 16:55:24 +0000 (16:55 +0000)]
Update Headers in CMake script file for the new license
git-svn-id: https://svn.dealii.org/trunk@30035
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maier [Thu, 18 Jul 2013 14:55:19 +0000 (14:55 +0000)]
Finalize template headers
git-svn-id: https://svn.dealii.org/trunk@30034
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bangerth [Thu, 18 Jul 2013 13:00:39 +0000 (13:00 +0000)]
Set props.
git-svn-id: https://svn.dealii.org/trunk@30033
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bangerth [Thu, 18 Jul 2013 12:59:28 +0000 (12:59 +0000)]
Adjust output after a recent change.
git-svn-id: https://svn.dealii.org/trunk@30032
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maier [Thu, 18 Jul 2013 11:10:32 +0000 (11:10 +0000)]
Fix some typos in comments
git-svn-id: https://svn.dealii.org/trunk@30031
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bangerth [Thu, 18 Jul 2013 01:47:00 +0000 (01:47 +0000)]
Do conversion of iterators right, following Timo's patches today.
git-svn-id: https://svn.dealii.org/trunk@30030
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bangerth [Wed, 17 Jul 2013 21:56:51 +0000 (21:56 +0000)]
Fix it the right way.
git-svn-id: https://svn.dealii.org/trunk@30029
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bangerth [Wed, 17 Jul 2013 21:12:28 +0000 (21:12 +0000)]
Re-enable the code from r30020 but initializing uninitialized data
(this caused the many testsuite failures).
git-svn-id: https://svn.dealii.org/trunk@30028
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heister [Wed, 17 Jul 2013 20:58:49 +0000 (20:58 +0000)]
make the conversion from from Accessor to TriaIterators explicit
git-svn-id: https://svn.dealii.org/trunk@30027
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maier [Wed, 17 Jul 2013 20:44:50 +0000 (20:44 +0000)]
CMake: Fix a typo in a comment
git-svn-id: https://svn.dealii.org/trunk@30026
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koecher [Wed, 17 Jul 2013 19:51:11 +0000 (19:51 +0000)]
changed vtk_cell_type dimension to 5, to allow dim=4 instantiation, as supposed by Wolfgang
git-svn-id: https://svn.dealii.org/trunk@30025
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bangerth [Wed, 17 Jul 2013 19:18:33 +0000 (19:18 +0000)]
Avoid warning about casting double to unsigned int.
git-svn-id: https://svn.dealii.org/trunk@30024
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bangerth [Wed, 17 Jul 2013 14:36:21 +0000 (14:36 +0000)]
Do say if there is no additional information. Move code under an if() statement as well.
git-svn-id: https://svn.dealii.org/trunk@30023
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maier [Wed, 17 Jul 2013 11:08:43 +0000 (11:08 +0000)]
CMake: Change inclusion order so that metis gets processed before petsc
git-svn-id: https://svn.dealii.org/trunk@30022
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bangerth [Tue, 16 Jul 2013 21:57:18 +0000 (21:57 +0000)]
Revert it once again. There are many errors that I don't see on my system...
git-svn-id: https://svn.dealii.org/trunk@30021
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bangerth [Tue, 16 Jul 2013 19:45:42 +0000 (19:45 +0000)]
Fix a bug in VectorTools::project.
git-svn-id: https://svn.dealii.org/trunk@30020
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bangerth [Tue, 16 Jul 2013 19:26:17 +0000 (19:26 +0000)]
Properly qualify shared_ptr.
git-svn-id: https://svn.dealii.org/trunk@30019
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heister [Tue, 16 Jul 2013 19:15:59 +0000 (19:15 +0000)]
speed up DoF renumbering for distributed DoFHandler
git-svn-id: https://svn.dealii.org/trunk@30018
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bangerth [Tue, 16 Jul 2013 19:08:07 +0000 (19:08 +0000)]
VectorTools::project has worked in 1d for a while already. Test that as well.
git-svn-id: https://svn.dealii.org/trunk@30017
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heister [Tue, 16 Jul 2013 18:32:49 +0000 (18:32 +0000)]
fix tests
git-svn-id: https://svn.dealii.org/trunk@30016
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bangerth [Tue, 16 Jul 2013 16:53:13 +0000 (16:53 +0000)]
Remove wrong #include.
git-svn-id: https://svn.dealii.org/trunk@30015
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bangerth [Tue, 16 Jul 2013 16:51:56 +0000 (16:51 +0000)]
Ignore Eclipse project files in these directories.
git-svn-id: https://svn.dealii.org/trunk@30014
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bangerth [Tue, 16 Jul 2013 16:43:55 +0000 (16:43 +0000)]
Final version of the thread-local variant of WorkStream, using multiple scratch objects per thread. The story is in the comments documenting the lists of thread local variables.
git-svn-id: https://svn.dealii.org/trunk@30013
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bangerth [Tue, 16 Jul 2013 16:41:19 +0000 (16:41 +0000)]
Final version of the test.
git-svn-id: https://svn.dealii.org/trunk@30012
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bangerth [Tue, 16 Jul 2013 16:33:27 +0000 (16:33 +0000)]
Make things compile in C++98 mode as well.
git-svn-id: https://svn.dealii.org/trunk@30011
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maier [Tue, 16 Jul 2013 11:55:24 +0000 (11:55 +0000)]
CMake: Improve renaming
git-svn-id: https://svn.dealii.org/trunk@30010
0785d39b -7218-0410-832d-
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