]>
https://gitweb.dealii.org/ - dealii.git/log
David Wells [Sat, 15 Feb 2020 16:03:21 +0000 (08:03 -0800)]
Merge pull request #9533 from tjhei/assert_throw_lapack
Use AssertThrow when LAPACK or other dependencies are not installed
Martin Kronbichler [Sat, 15 Feb 2020 14:52:32 +0000 (15:52 +0100)]
Merge pull request #9534 from tjhei/mg_tansfer_64bit_but_not_really_a_bug
Use a 64bit type in one other MGTransfer location
Timo Heister [Sat, 15 Feb 2020 14:12:24 +0000 (09:12 -0500)]
Merge pull request #9536 from bangerth/nonlocal
Avoid nonlocal control flow since it's so hard to read.
Martin Kronbichler [Sat, 15 Feb 2020 06:20:55 +0000 (07:20 +0100)]
Merge pull request #9537 from bangerth/pedantic
Be pedantic in how we spell deal.II.
Wolfgang Bangerth [Sat, 15 Feb 2020 05:58:18 +0000 (22:58 -0700)]
Use better markup when talking about header files.
Wolfgang Bangerth [Sat, 15 Feb 2020 05:56:54 +0000 (22:56 -0700)]
Be pedantic in how we spell deal.II.
Wolfgang Bangerth [Sat, 15 Feb 2020 05:28:16 +0000 (22:28 -0700)]
Avoid nonlocal control flow since it's so hard to read.
Timo Heister [Sat, 15 Feb 2020 05:26:35 +0000 (00:26 -0500)]
find other places to AssertThrow for missing dependencies
Timo Heister [Sat, 15 Feb 2020 05:07:50 +0000 (00:07 -0500)]
Merge pull request #9531 from bangerth/refs
Move the step-71 -> step-47 references in references.bib.
Daniel Arndt [Sat, 15 Feb 2020 05:00:20 +0000 (00:00 -0500)]
Merge pull request #9532 from tjhei/examples_no_h2
do not use <h2> tag in tutorials
Timo Heister [Sat, 15 Feb 2020 04:55:22 +0000 (23:55 -0500)]
Use a 64bit type in one other MGTransfer location
This is a local index (how manyth index) and as such likely under 4
billion. I found it harder to assert or document why this cast makes
sense, so I rather change the type.
Timo Heister [Sat, 15 Feb 2020 04:42:27 +0000 (23:42 -0500)]
Use AssertThrow when no LAPACK is installed
This bit me on a run in release mode on a cluster today, because my
deal.II didn't have a working LAPACK.
Timo Heister [Sat, 15 Feb 2020 04:38:04 +0000 (23:38 -0500)]
do not use <h2> tag in tutorials
I am not quite sure why, but they don't show up in the table of
contents. We have been avoiding them, but a few tutorials seem to
violate this now.
Wolfgang Bangerth [Sat, 15 Feb 2020 04:30:08 +0000 (21:30 -0700)]
Move the step-71 -> step-47 references in references.bib.
Wolfgang Bangerth [Fri, 14 Feb 2020 17:49:52 +0000 (18:49 +0100)]
Merge pull request #9528 from kronbichler/fix_64bit_type
Use types::global_dof_index rather than unsigned int in MGTransfer
Martin Kronbichler [Fri, 14 Feb 2020 08:31:46 +0000 (09:31 +0100)]
Use types::global_dof_index rather than unsigned int in MGTransfer
Bruno Turcksin [Fri, 14 Feb 2020 02:23:45 +0000 (21:23 -0500)]
Merge pull request #9510 from agrayver/add_python_wrappers
Add more python bindings
David Wells [Fri, 14 Feb 2020 00:19:58 +0000 (16:19 -0800)]
Merge pull request #9527 from GrahamBenHarper/graham_dev_fix_tables
Remove empty lines inside html tables
grahambenharper [Thu, 13 Feb 2020 23:43:00 +0000 (16:43 -0700)]
Remove empty lines inside html tables
Martin Kronbichler [Thu, 13 Feb 2020 07:10:09 +0000 (08:10 +0100)]
Merge pull request #9511 from tamiko/fix_indent_for_old_git
Indent script: Do not use --diff-filter=d
Martin Kronbichler [Thu, 13 Feb 2020 07:04:37 +0000 (08:04 +0100)]
Merge pull request #9522 from bangerth/14
Scale a graphic in the results section of step-14.
Martin Kronbichler [Thu, 13 Feb 2020 07:02:35 +0000 (08:02 +0100)]
Merge pull request #9525 from kronbichler/fill_q_points
Ensure to have valid quadrature point data for all SIMD lanes
Martin Kronbichler [Thu, 13 Feb 2020 07:02:13 +0000 (08:02 +0100)]
Merge pull request #9524 from kronbichler/fix_fe_eval_vector
FEEvaluation: Place exception about no block vector correctly
Martin Kronbichler [Thu, 13 Feb 2020 07:01:24 +0000 (08:01 +0100)]
Merge pull request #9519 from kronbichler/fix_minmaxavg_mpi
Avoid calling into MPI functions with MinMaxAvg in serial
Daniel Arndt [Wed, 12 Feb 2020 19:06:27 +0000 (14:06 -0500)]
Merge pull request #9523 from bangerth/6
Replace eps-generated figure by vtu-generated one in step-6.
Timo Heister [Wed, 12 Feb 2020 18:57:13 +0000 (13:57 -0500)]
Merge pull request #9518 from rezarastak/value_semantics
Use value semantics for const parameters with trivial small types
Alexander Grayver [Wed, 12 Feb 2020 15:32:52 +0000 (16:32 +0100)]
Add python binding for TriaAccessor::centre
Alexander Grayver [Wed, 12 Feb 2020 15:08:50 +0000 (16:08 +0100)]
Add extra CylindricalManifold constructor
Martin Kronbichler [Wed, 12 Feb 2020 14:46:25 +0000 (15:46 +0100)]
Ensure to have valid quadrature point data for all SIMD lanes
Martin Kronbichler [Wed, 12 Feb 2020 14:38:26 +0000 (15:38 +0100)]
FEEvaluation: Place exception about no block vector correctly
Wolfgang Bangerth [Wed, 12 Feb 2020 14:12:13 +0000 (07:12 -0700)]
Replace eps-generated figure by vtu-generated one in step-6.
Wolfgang Bangerth [Wed, 12 Feb 2020 13:54:36 +0000 (06:54 -0700)]
Scale a graphic in the results section of step-14.
Make it the same size as the other images of the solution.
Martin Kronbichler [Wed, 12 Feb 2020 10:20:16 +0000 (11:20 +0100)]
Merge pull request #9493 from bangerth/30
Convert step-30 from using eps/gnuplot to svg/vtu.
Martin Kronbichler [Wed, 12 Feb 2020 10:19:17 +0000 (11:19 +0100)]
Merge pull request #9495 from bangerth/14
Convert step-14 from using eps/gnuplot to svg/vtu.
Martin Kronbichler [Wed, 12 Feb 2020 10:18:27 +0000 (11:18 +0100)]
Merge pull request #9514 from peterrum/write_vtu_with_pvtu_record_comm
Remove MPI_COMM_WORLD as default argument in write_vtu_with_pvtu_record
Martin Kronbichler [Wed, 12 Feb 2020 10:18:03 +0000 (11:18 +0100)]
Merge pull request #9515 from GrahamBenHarper/graham_dev_vec_warnings
Remove some unused variable warnings in vectorization.h
Martin Kronbichler [Wed, 12 Feb 2020 10:17:47 +0000 (11:17 +0100)]
Merge pull request #9516 from marcfehling/bug-weights
parallel::CellWeights: Capture values, not references.
Martin Kronbichler [Wed, 12 Feb 2020 10:13:58 +0000 (11:13 +0100)]
Avoid calling into MPI functions with MinMaxAvg in serial
Reza Rastak [Wed, 12 Feb 2020 08:45:22 +0000 (00:45 -0800)]
Use value semantics for parameters with trivial small types
Alexander Grayver [Tue, 11 Feb 2020 15:41:17 +0000 (16:41 +0100)]
Add more python binds
Wolfgang Bangerth [Tue, 11 Feb 2020 21:07:44 +0000 (22:07 +0100)]
Merge pull request #9451 from sophy1029/step-47
step-47: switch the jump and average in one term of the scheme.
Marc Fehling [Tue, 11 Feb 2020 19:23:34 +0000 (20:23 +0100)]
parallel::CellWeights: Capture values, not references.
grahambenharper [Tue, 11 Feb 2020 18:53:15 +0000 (11:53 -0700)]
Remove some unused variable warnings
Peter Munch [Tue, 11 Feb 2020 17:59:51 +0000 (18:59 +0100)]
Remove MPI_COMM_WORLD as default arguemtn in write_vtu_with_pvtu_record
Wolfgang Bangerth [Tue, 11 Feb 2020 17:53:24 +0000 (18:53 +0100)]
Merge pull request #9474 from GrahamBenHarper/graham_dev_svg_boundaryid
Add boundary id functionality to write_svg
Wolfgang Bangerth [Tue, 11 Feb 2020 17:50:51 +0000 (18:50 +0100)]
Merge pull request #9506 from GrahamBenHarper/graham_dev_clean_tutorials
Update tutorial programs to fix all broken dox links
Wolfgang Bangerth [Tue, 11 Feb 2020 17:50:23 +0000 (18:50 +0100)]
Merge pull request #9512 from kronbichler/fix_muelu_test
Fix MueLu periodicity test
grahambenharper [Mon, 10 Feb 2020 21:59:59 +0000 (14:59 -0700)]
Update tutorial programs to fix broken dox links
Martin Kronbichler [Tue, 11 Feb 2020 17:35:17 +0000 (18:35 +0100)]
Fix MueLu periodicity test
Matthias Maier [Tue, 11 Feb 2020 17:15:44 +0000 (11:15 -0600)]
Indent script: Do not use --diff-filter=d
This hopefully fixes some compatibility issues with ancient git versions
not supporting the --diff-filter option.
Closes #9489
David Wells [Tue, 11 Feb 2020 12:48:19 +0000 (07:48 -0500)]
Merge pull request #9507 from bangerth/6
Minor edit to step-6's results section.
Wolfgang Bangerth [Tue, 11 Feb 2020 04:58:18 +0000 (05:58 +0100)]
Merge pull request #9508 from masterleinad/fix_section_step_45
Fix sections in step-45
Daniel Arndt [Tue, 11 Feb 2020 04:52:42 +0000 (23:52 -0500)]
Merge pull request #9473 from peterrum/minmaxave_vector
Add Utilities::MPI::min_max_avg() for vectors
Daniel Arndt [Tue, 11 Feb 2020 03:18:25 +0000 (22:18 -0500)]
Fix sections in step-45
Wolfgang Bangerth [Tue, 11 Feb 2020 02:57:26 +0000 (19:57 -0700)]
Minor edit to step-6's results section.
Wolfgang Bangerth [Mon, 10 Feb 2020 20:46:12 +0000 (21:46 +0100)]
Merge pull request #9501 from jihuan-tian/jihuan-tian-contrib
Correct the printed message output from ExcInvalidBoundaryFunction()
Timo Heister [Mon, 10 Feb 2020 18:45:45 +0000 (13:45 -0500)]
Merge pull request #9504 from GrahamBenHarper/graham_dev_step61
Fix header names in step-61
grahambenharper [Mon, 10 Feb 2020 17:12:39 +0000 (10:12 -0700)]
Fix header names in step-61
Timo Heister [Mon, 10 Feb 2020 16:19:51 +0000 (11:19 -0500)]
Merge pull request #9503 from masterleinad/create_separate_artifacts
Create separate artifacts in GitHub workflows
Daniel Arndt [Mon, 10 Feb 2020 14:31:14 +0000 (09:31 -0500)]
Create separate artifacts in GitHub workflows
Timo Heister [Mon, 10 Feb 2020 14:19:42 +0000 (09:19 -0500)]
Merge pull request #9500 from drwells/remove-eps-step-6
Remove eps step 6
Jihuan Tian [Mon, 10 Feb 2020 05:48:50 +0000 (13:48 +0800)]
Merge remote-tracking branch 'upstream/master' into jihuan-tian-contrib
Jihuan Tian [Mon, 10 Feb 2020 05:47:26 +0000 (13:47 +0800)]
Add a description file for the fix committed in
c4b096d
Martin Kronbichler [Sun, 9 Feb 2020 20:43:46 +0000 (21:43 +0100)]
Merge pull request #9237 from tjhei/trilinos_muelu_optional
make MueLu optional in Trilinos
Martin Kronbichler [Sun, 9 Feb 2020 20:38:48 +0000 (21:38 +0100)]
Merge pull request #9278 from tjhei/single_level_data_out
test DataOut set_cell_selection for multilevel cells
Timo Heister [Thu, 6 Feb 2020 15:06:13 +0000 (10:06 -0500)]
update tests, disable muelu tests
Jihuan Tian [Sun, 9 Feb 2020 15:58:50 +0000 (23:58 +0800)]
Correct the printed message output from ExcInvalidBoundaryFunction()
Timo Heister [Sun, 9 Feb 2020 15:54:07 +0000 (10:54 -0500)]
make test work without mpi
Peter Munch [Mon, 3 Feb 2020 17:35:17 +0000 (18:35 +0100)]
Add Utilities::MPI::min_max_avg() for vectors
David Wells [Sun, 9 Feb 2020 02:27:12 +0000 (21:27 -0500)]
Clean up some whitespace in step-6 results.
David Wells [Sun, 9 Feb 2020 02:23:22 +0000 (21:23 -0500)]
Remove EPS output from step-6.
Daniel Arndt [Sun, 9 Feb 2020 02:43:48 +0000 (21:43 -0500)]
Merge pull request #9499 from peterrum/matrixfree_new
Remove most new in folder include/deal.II/matrix_free/
Daniel Arndt [Sat, 8 Feb 2020 13:43:03 +0000 (08:43 -0500)]
Merge pull request #9004 from BrettDong/icc
Add a check on whether LLD links shared object
Peter Munch [Sat, 8 Feb 2020 09:42:07 +0000 (10:42 +0100)]
Remove most new in folder include/deal.II/matrix_free/
Martin Kronbichler [Sat, 8 Feb 2020 07:58:36 +0000 (08:58 +0100)]
Merge pull request #9160 from peterrum/ecl-loop
ECL: add loop_cell_centric
Martin Kronbichler [Sat, 8 Feb 2020 07:57:40 +0000 (08:57 +0100)]
Merge pull request #9494 from peterrum/matrixfree_hold_all_faces_to_owned_cells_fix
Matrixfree hold all faces to owned cells fix
Daniel Arndt [Sat, 8 Feb 2020 03:49:54 +0000 (22:49 -0500)]
Merge pull request #9492 from peterrum/arrayview_scalar
Add new constructor to ArrayView
Wolfgang Bangerth [Fri, 7 Feb 2020 23:46:27 +0000 (00:46 +0100)]
Merge pull request #9498 from masterleinad/fix_more_gmsh
Fix more Gmsh references
Daniel Arndt [Fri, 7 Feb 2020 23:20:43 +0000 (18:20 -0500)]
Fix more Gmsh references
Wolfgang Bangerth [Fri, 7 Feb 2020 20:46:53 +0000 (13:46 -0700)]
Convert step-14 from using eps/gnuplot to svg/vtu.
The figures as currently used are actually quite ugly. We can do
substantially better. While there, also clean up the
function that creates output a bit.
Zhuoran Wang [Fri, 7 Feb 2020 22:35:08 +0000 (15:35 -0700)]
Use jump notation to the RHS for explanation simplicity.
Zhuoran Wang [Fri, 7 Feb 2020 22:26:38 +0000 (15:26 -0700)]
Correct the LHS of the scheme.
Zhuoran Wang [Fri, 7 Feb 2020 22:20:06 +0000 (15:20 -0700)]
Add extra term from the symmetrization to the rhs. Use average and jump notation on rhs for simplicity.
Zhuoran Wang [Thu, 30 Jan 2020 21:33:47 +0000 (14:33 -0700)]
Add one term to the rhs of the scheme.
Zhuoran Wang [Thu, 30 Jan 2020 21:16:57 +0000 (14:16 -0700)]
switch the jump and average in one term of the scheme.
Matthias Maier [Fri, 7 Feb 2020 21:53:46 +0000 (15:53 -0600)]
Merge pull request #9496 from agrayver/fix_step_49
Avoid automatic referencing
Alexander Grayver [Fri, 7 Feb 2020 21:38:45 +0000 (22:38 +0100)]
Avoid automatic referencing
Peter Munch [Tue, 10 Dec 2019 16:57:34 +0000 (17:57 +0100)]
Add loop_cell_centric
Wolfgang Bangerth [Fri, 7 Feb 2020 18:09:02 +0000 (11:09 -0700)]
Convert step-30 from using eps/gnuplot to svg/vtu.
The figures as currently used are actually quite ugly. We can do
substantially better. While there, also clean up the
function that creates output a bit.
Peter Munch [Fri, 7 Feb 2020 18:47:06 +0000 (19:47 +0100)]
Update documentation
Peter Munch [Fri, 7 Feb 2020 18:46:35 +0000 (19:46 +0100)]
Initialize entry 4 and 5 of IndexStorageVariants::vector_partitioner_face_variants
Peter Munch [Fri, 7 Feb 2020 17:54:44 +0000 (18:54 +0100)]
Add new constructor to ArrayView
grahambenharper [Thu, 6 Feb 2020 21:59:47 +0000 (14:59 -0700)]
Update GridOutFlags::Svg documentation to show an example.
grahambenharper [Mon, 3 Feb 2020 18:31:12 +0000 (11:31 -0700)]
Add a test to verify the write_svg boundary id functionality
Matthias Maier [Thu, 6 Feb 2020 16:59:44 +0000 (10:59 -0600)]
CMake: Simplify configuration logic
Matthias Maier [Fri, 7 Feb 2020 16:16:38 +0000 (10:16 -0600)]
Merge pull request #9429 from agrayver/add_python_gridtools_method
Add python bind for compute_aspect_ratio_of_cells
Matthias Maier [Fri, 7 Feb 2020 16:16:24 +0000 (10:16 -0600)]
Merge pull request #9472 from kronbichler/timer_print_statistics
Add function to print statistics over MPI for TimerOutput
Alexander Grayver [Fri, 7 Feb 2020 10:45:25 +0000 (11:45 +0100)]
Fix const-ness
Martin Kronbichler [Fri, 7 Feb 2020 07:27:58 +0000 (08:27 +0100)]
Use io saver class to restore flags/precision/width
Martin Kronbichler [Tue, 4 Feb 2020 11:39:56 +0000 (12:39 +0100)]
Also allow to print quantiles
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