]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
4 years agoMerge pull request #10478 from nfehn/tolerance_find_active_cells
Luca Heltai [Thu, 11 Jun 2020 12:44:58 +0000 (14:44 +0200)]
Merge pull request #10478 from nfehn/tolerance_find_active_cells

Equip GridTools::find_active_cell_around_point() with tolerance

4 years agoMerge pull request #10473 from bangerth/affine-2
Daniel Arndt [Thu, 11 Jun 2020 12:26:36 +0000 (08:26 -0400)]
Merge pull request #10473 from bangerth/affine-2

4 years agoMerge pull request #10509 from bangerth/style
Martin Kronbichler [Thu, 11 Jun 2020 05:44:57 +0000 (07:44 +0200)]
Merge pull request #10509 from bangerth/style

Use usual ++var style.

4 years agoMerge pull request #10505 from tjhei/feiv_test_update
Matthias Maier [Thu, 11 Jun 2020 03:42:30 +0000 (22:42 -0500)]
Merge pull request #10505 from tjhei/feiv_test_update

improve tests/feinterface/*

4 years agoMerge pull request #10504 from Rombur/cuda_mf_fix
Daniel Arndt [Thu, 11 Jun 2020 01:45:19 +0000 (21:45 -0400)]
Merge pull request #10504 from Rombur/cuda_mf_fix

4 years agoFix comparison warning 10504/head
Bruno Turcksin [Thu, 11 Jun 2020 00:49:30 +0000 (00:49 +0000)]
Fix comparison warning

4 years agoFix a bug in CUDAWrappers::MatrixFree::cell_loop when different partitioners are...
Bruno Turcksin [Wed, 10 Jun 2020 19:16:15 +0000 (19:16 +0000)]
Fix a bug in CUDAWrappers::MatrixFree::cell_loop when different partitioners are used

4 years agoMerge pull request #10496 from masterleinad/fix_petsc_complex_instantiation
Daniel Arndt [Thu, 11 Jun 2020 00:25:01 +0000 (20:25 -0400)]
Merge pull request #10496 from masterleinad/fix_petsc_complex_instantiation

Add missing instantiation for PETSc with complex values

4 years agoMake move operation explicit. 10473/head
Wolfgang Bangerth [Wed, 10 Jun 2020 22:43:33 +0000 (16:43 -0600)]
Make move operation explicit.

4 years agoUse usual ++var style. 10509/head
Wolfgang Bangerth [Wed, 10 Jun 2020 22:11:14 +0000 (16:11 -0600)]
Use usual ++var style.

4 years agoMerge pull request #10465 from peterrum/internal_TriaAccessorImplementation_Implement...
Matthias Maier [Wed, 10 Jun 2020 20:59:42 +0000 (15:59 -0500)]
Merge pull request #10465 from peterrum/internal_TriaAccessorImplementation_Implementation

Remove unneeded template argument

4 years agoAugment some documentation. Mark functions as 'noexcept'.
Wolfgang Bangerth [Wed, 10 Jun 2020 20:58:19 +0000 (14:58 -0600)]
Augment some documentation. Mark functions as 'noexcept'.

4 years agoimprove tests/feinterface/* 10505/head
Timo Heister [Wed, 10 Jun 2020 19:31:21 +0000 (15:31 -0400)]
improve tests/feinterface/*

- use -1 instead of unsigned int

4 years agoMerge pull request #10442 from peterrum/pft_update_test_output
Daniel Arndt [Wed, 10 Jun 2020 18:10:00 +0000 (14:10 -0400)]
Merge pull request #10442 from peterrum/pft_update_test_output

Update output of test

4 years agoMerge pull request #10501 from masterleinad/remove_percent
Matthias Maier [Wed, 10 Jun 2020 17:54:37 +0000 (12:54 -0500)]
Merge pull request #10501 from masterleinad/remove_percent

Remove % in documentation

4 years agoMerge pull request #10502 from masterleinad/remove_appveyor
Timo Heister [Wed, 10 Jun 2020 17:52:57 +0000 (13:52 -0400)]
Merge pull request #10502 from masterleinad/remove_appveyor

Remove appveyor

4 years agoMerge pull request #10491 from tjhei/github_actions_indent
Daniel Arndt [Wed, 10 Jun 2020 17:42:09 +0000 (13:42 -0400)]
Merge pull request #10491 from tjhei/github_actions_indent

[CI] add githubactions indent/documentation check

4 years agoMerge pull request #10499 from tjhei/ci_github_actions_windows_no_zlib
Daniel Arndt [Wed, 10 Jun 2020 16:03:42 +0000 (12:03 -0400)]
Merge pull request #10499 from tjhei/ci_github_actions_windows_no_zlib

[CI] github-actions windows: disable zlib

4 years agoMerge pull request #10485 from drwells/readme-link
Daniel Arndt [Wed, 10 Jun 2020 15:55:53 +0000 (11:55 -0400)]
Merge pull request #10485 from drwells/readme-link

Fix a dead link in the top level readme.

4 years agoRemove appveyor 10502/head
Daniel Arndt [Wed, 10 Jun 2020 15:42:15 +0000 (11:42 -0400)]
Remove appveyor

4 years agoRemove % in documentation 10501/head
Daniel Arndt [Wed, 10 Jun 2020 14:27:11 +0000 (10:27 -0400)]
Remove % in documentation

4 years ago[CI] github-actions windows: disable zlib 10499/head
Timo Heister [Wed, 10 Jun 2020 15:02:14 +0000 (11:02 -0400)]
[CI] github-actions windows: disable zlib

The zlib found on the system is a x86 lib that is not compatible with
our x64 build. Disable auto detection for now.

4 years agoMerge pull request #10495 from tjhei/doxygen_ref_step_links_only_numbered
Daniel Arndt [Wed, 10 Jun 2020 14:20:04 +0000 (10:20 -0400)]
Merge pull request #10495 from tjhei/doxygen_ref_step_links_only_numbered

doxygen filter: do not try to link step- without number

4 years agoAdd missing instantiation for PETSc with complex values 10496/head
Daniel Arndt [Wed, 10 Jun 2020 14:12:00 +0000 (10:12 -0400)]
Add missing instantiation for PETSc with complex values

4 years agodoxygen filter: do not try to link step- without number 10495/head
Timo Heister [Wed, 10 Jun 2020 14:07:19 +0000 (10:07 -0400)]
doxygen filter: do not try to link step- without number

We are currently trying to create a hyperlink for every occurance of
step-BLA found in the documentation. This requires escaping words like
"step-number" using a backslash. This is confusing.
Instead, only do this if the dash is followed by a digit.

Fixes #10489

4 years agoMerge pull request #10453 from peterrum/pft_level_fix
Martin Kronbichler [Wed, 10 Jun 2020 12:34:16 +0000 (14:34 +0200)]
Merge pull request #10453 from peterrum/pft_level_fix

Fix distribution of levels in pft

4 years ago[CI] add githubactions indent/documentation check 10491/head
Timo Heister [Wed, 10 Jun 2020 11:59:06 +0000 (07:59 -0400)]
[CI] add githubactions indent/documentation check

add a new "indent" check on github actions that mirrors what we do on
travisci (to ultimately replace it).

4 years agoadd an include
Matthias Maier [Wed, 10 Jun 2020 00:59:08 +0000 (19:59 -0500)]
add an include

4 years agoThreadLocalStorage: add copy and move constructors
Matthias Maier [Wed, 10 Jun 2020 00:51:27 +0000 (19:51 -0500)]
ThreadLocalStorage: add copy and move constructors

Add copy and move constructors and corresponding copy and move
assignment operators.

4 years agoMake the AffineConstraints scratch storage object-local.
Wolfgang Bangerth [Fri, 5 Jun 2020 13:17:46 +0000 (07:17 -0600)]
Make the AffineConstraints scratch storage object-local.

4 years agoNext step in fixing AffineConstraints.
Wolfgang Bangerth [Fri, 5 Jun 2020 00:12:47 +0000 (18:12 -0600)]
Next step in fixing AffineConstraints.

4 years agoMerge pull request #10162 from jppelteret/sd-tests_01
Matthias Maier [Tue, 9 Jun 2020 19:34:34 +0000 (14:34 -0500)]
Merge pull request #10162 from jppelteret/sd-tests_01

Refactor some SD tests

4 years agoFix a dead link in the top level readme. 10485/head
David Wells [Tue, 9 Jun 2020 14:54:08 +0000 (10:54 -0400)]
Fix a dead link in the top level readme.

4 years agoMerge pull request #10484 from tamiko/avoid_symbol_clash
Matthias Maier [Tue, 9 Jun 2020 18:19:26 +0000 (13:19 -0500)]
Merge pull request #10484 from tamiko/avoid_symbol_clash

CMake: Avoid another symbol clash with adol-c

4 years agoMerge pull request #10483 from tamiko/fix_compilation
Matthias Maier [Tue, 9 Jun 2020 18:19:13 +0000 (13:19 -0500)]
Merge pull request #10483 from tamiko/fix_compilation

Fix compilation with c++14: add missing instantiation

4 years agoGridTools::find_active_cell_around_point(): introduce tolerance as parameter 10478/head
Niklas Fehn [Sun, 7 Jun 2020 20:33:41 +0000 (22:33 +0200)]
GridTools::find_active_cell_around_point(): introduce tolerance as parameter

4 years agoMerge pull request #10477 from nfehn/refactoring_find_all_active_cells
Peter Munch [Tue, 9 Jun 2020 10:14:47 +0000 (12:14 +0200)]
Merge pull request #10477 from nfehn/refactoring_find_all_active_cells

refactoring of GridTools::find_all_active_cells_around_point()

4 years agoMerge pull request #10456 from nfehn/find_active_cells
Martin Kronbichler [Tue, 9 Jun 2020 10:05:45 +0000 (12:05 +0200)]
Merge pull request #10456 from nfehn/find_active_cells

Fix bug in find_active_cell_around_point_tolerance()

4 years agorefactoring of GridTools::find_all_active_cells_around_point() 10477/head
Niklas Fehn [Sun, 7 Jun 2020 17:22:33 +0000 (19:22 +0200)]
refactoring of GridTools::find_all_active_cells_around_point()

4 years agoCMake: Avoid another symbol clash with adol-c 10484/head
Matthias Maier [Tue, 9 Jun 2020 03:45:56 +0000 (22:45 -0500)]
CMake: Avoid another symbol clash with adol-c

4 years agosilence doxygen 10483/head
Matthias Maier [Tue, 9 Jun 2020 02:49:57 +0000 (21:49 -0500)]
silence doxygen

4 years agoadd missing instantiations
Matthias Maier [Tue, 9 Jun 2020 01:56:11 +0000 (20:56 -0500)]
add missing instantiations

4 years agoMerge pull request #10348 from mathmerizing/MGTransfer-add-constraints
Daniel Arndt [Mon, 8 Jun 2020 19:40:24 +0000 (15:40 -0400)]
Merge pull request #10348 from mathmerizing/MGTransfer-add-constraints

4 years agoMoved copy of vector into if block 10348/head
Julian Roth [Sat, 6 Jun 2020 20:17:13 +0000 (22:17 +0200)]
Moved copy of vector into if block

4 years agoMerge pull request #10458 from nfehn/docu_find_active_cells
Martin Kronbichler [Sat, 6 Jun 2020 17:38:41 +0000 (19:38 +0200)]
Merge pull request #10458 from nfehn/docu_find_active_cells

remove redundant documentation for GridTools::find_active_cell_around_point() functions

4 years agoMerge pull request #10470 from masterleinad/fix_more_address_sanitizer
Wolfgang Bangerth [Sat, 6 Jun 2020 14:01:17 +0000 (16:01 +0200)]
Merge pull request #10470 from masterleinad/fix_more_address_sanitizer

Fix more issues found by AddressSanitizer

4 years agoMerge pull request #10448 from bangerth/tria_object
Daniel Arndt [Sat, 6 Jun 2020 03:44:40 +0000 (23:44 -0400)]
Merge pull request #10448 from bangerth/tria_object

4 years agoMerge pull request #10457 from nfehn/bounding_box
Wolfgang Bangerth [Fri, 5 Jun 2020 21:06:40 +0000 (23:06 +0200)]
Merge pull request #10457 from nfehn/bounding_box

add tolerance to BoundingBox::point_inside()

4 years agoMerge pull request #10416 from masterleinad/remove_author_information
David Wells [Fri, 5 Jun 2020 21:01:37 +0000 (17:01 -0400)]
Merge pull request #10416 from masterleinad/remove_author_information

Remove author information from source files

4 years agoAdd a changelog entry. 10448/head
Wolfgang Bangerth [Fri, 5 Jun 2020 20:37:10 +0000 (14:37 -0600)]
Add a changelog entry.

4 years agoMerge pull request #10467 from tjhei/quick_test_use_with_tbb
Timo Heister [Fri, 5 Jun 2020 20:09:16 +0000 (16:09 -0400)]
Merge pull request #10467 from tjhei/quick_test_use_with_tbb

use WITH_TBB for the affinity quicktest

4 years agoAdded check whether there actually are any user_constraints
Julian Roth [Fri, 5 Jun 2020 19:31:55 +0000 (21:31 +0200)]
Added check whether there actually are any user_constraints

4 years agoMerge pull request #10468 from tjhei/taskflow-update-2.5.0
Daniel Arndt [Fri, 5 Jun 2020 18:51:32 +0000 (14:51 -0400)]
Merge pull request #10468 from tjhei/taskflow-update-2.5.0

update taskflow to 2.5.0

4 years agoFix type of variable in GridTools::compute_local_to_global_vertex_index_map 10470/head
Daniel Arndt [Fri, 5 Jun 2020 18:26:20 +0000 (14:26 -0400)]
Fix type of variable in GridTools::compute_local_to_global_vertex_index_map

4 years agoFix IndexSet::is_ascending_and_one_to_one for empty objects
Daniel Arndt [Fri, 5 Jun 2020 16:32:06 +0000 (12:32 -0400)]
Fix IndexSet::is_ascending_and_one_to_one for empty objects

4 years agoFix move construction/assignment for Subscriptor
Daniel Arndt [Fri, 5 Jun 2020 16:20:01 +0000 (12:20 -0400)]
Fix move construction/assignment for Subscriptor

4 years agoadd docu and test, make implementation more readable 10457/head
Niklas Fehn [Fri, 5 Jun 2020 17:57:53 +0000 (19:57 +0200)]
add docu and test, make implementation more readable

4 years agoUpdated changelog
Julian Roth [Fri, 5 Jun 2020 17:55:07 +0000 (19:55 +0200)]
Updated changelog

4 years agouse WITH_TBB for the affinity quicktest 10467/head
Timo Heister [Fri, 5 Jun 2020 11:41:59 +0000 (07:41 -0400)]
use WITH_TBB for the affinity quicktest

4 years agoupdate taskflow to 2.5.0 10468/head
Timo Heister [Fri, 5 Jun 2020 11:47:15 +0000 (07:47 -0400)]
update taskflow to 2.5.0

4 years agoOnly distributing user constraints before prolongation
Julian Roth [Fri, 5 Jun 2020 17:36:55 +0000 (19:36 +0200)]
Only distributing user constraints before prolongation

4 years agoUpdate output of test 10442/head
Peter Munch [Tue, 2 Jun 2020 14:17:39 +0000 (16:17 +0200)]
Update output of test

4 years agoRemove unneded template argument 10465/head
Peter Munch [Fri, 5 Jun 2020 08:01:33 +0000 (10:01 +0200)]
Remove unneded template argument

4 years agoMerge pull request #10466 from tjhei/doc_tensorproductconstructor
David Wells [Fri, 5 Jun 2020 13:07:37 +0000 (09:07 -0400)]
Merge pull request #10466 from tjhei/doc_tensorproductconstructor

add some documentation to InterpolatedTensorProductGridData

4 years agoMerge pull request #10464 from peterrum/line_orientation_simplify
David Wells [Fri, 5 Jun 2020 13:03:07 +0000 (09:03 -0400)]
Merge pull request #10464 from peterrum/line_orientation_simplify

Simplify line_orientation()

4 years agoMerge pull request #10461 from masterleinad/fix_clang_10_bug_cleaned
David Wells [Fri, 5 Jun 2020 12:14:34 +0000 (08:14 -0400)]
Merge pull request #10461 from masterleinad/fix_clang_10_bug_cleaned

Avoid use-after-scope when calling MappinQCache::initialize multiply

4 years agoadd documentation to InterpolatedTensorProductGridData 10466/head
Timo Heister [Fri, 5 Jun 2020 11:39:23 +0000 (07:39 -0400)]
add documentation to InterpolatedTensorProductGridData

4 years agoallow ghost cells 10456/head
Niklas Fehn [Fri, 5 Jun 2020 08:02:24 +0000 (10:02 +0200)]
allow ghost cells

4 years agoSimplify line_orientation() 10464/head
Peter Munch [Fri, 5 Jun 2020 07:26:16 +0000 (09:26 +0200)]
Simplify line_orientation()

4 years agoMerge pull request #10369 from tjhei/matrix-free-no-bool
Martin Kronbichler [Fri, 5 Jun 2020 05:58:02 +0000 (07:58 +0200)]
Merge pull request #10369 from tjhei/matrix-free-no-bool

matrix-free: do not use bool args

4 years agoAlso fix TransfiniteInterpolationManifold::initialize 10461/head
Daniel Arndt [Fri, 5 Jun 2020 03:03:17 +0000 (23:03 -0400)]
Also fix TransfiniteInterpolationManifold::initialize

4 years agoAvoid use-after-scope when calling MappinQCache::initialize multiply
Daniel Arndt [Fri, 5 Jun 2020 02:40:46 +0000 (22:40 -0400)]
Avoid use-after-scope when calling MappinQCache::initialize multiply

4 years agoremove deprecation macro for now 10369/head
Timo Heister [Thu, 4 Jun 2020 19:52:39 +0000 (15:52 -0400)]
remove deprecation macro for now

4 years agoMerge pull request #10409 from tjhei/quick-test-taskflow
Daniel Arndt [Thu, 4 Jun 2020 21:48:28 +0000 (17:48 -0400)]
Merge pull request #10409 from tjhei/quick-test-taskflow

4 years agoMerge pull request #10454 from bangerth/affine
Daniel Arndt [Thu, 4 Jun 2020 21:02:31 +0000 (17:02 -0400)]
Merge pull request #10454 from bangerth/affine

Move some class declarations into the .h file.

4 years agoMerge pull request #10451 from tjhei/taskflow-rename-without-cpp
Peter Munch [Thu, 4 Jun 2020 20:02:09 +0000 (22:02 +0200)]
Merge pull request #10451 from tjhei/taskflow-rename-without-cpp

rename cpp-taskflow to taskflow

4 years agoremove redundant documentation 10458/head
Niklas Fehn [Thu, 4 Jun 2020 19:31:15 +0000 (21:31 +0200)]
remove redundant documentation

4 years agoadd tolerance to BoundingBox::point_inside()
Niklas Fehn [Thu, 4 Jun 2020 15:52:19 +0000 (17:52 +0200)]
add tolerance to BoundingBox::point_inside()

4 years agoMerge pull request #10455 from masterleinad/fix_clang_10_bug
Daniel Arndt [Thu, 4 Jun 2020 15:15:19 +0000 (11:15 -0400)]
Merge pull request #10455 from masterleinad/fix_clang_10_bug

4 years agofix bug in find_active_cell_around_point_tolerance()
Niklas Fehn [Thu, 4 Jun 2020 15:03:29 +0000 (17:03 +0200)]
fix bug in find_active_cell_around_point_tolerance()

4 years agoCompactify documentation 10455/head
Daniel Arndt [Thu, 4 Jun 2020 13:45:33 +0000 (09:45 -0400)]
Compactify documentation

4 years agoAvoid std::initializer_list
Daniel Arndt [Thu, 4 Jun 2020 13:44:06 +0000 (09:44 -0400)]
Avoid std::initializer_list

4 years agoMerge pull request #10452 from simonsticko/assert_range_in_tensor
Daniel Arndt [Thu, 4 Jun 2020 03:56:37 +0000 (23:56 -0400)]
Merge pull request #10452 from simonsticko/assert_range_in_tensor

Add assert on range of incoming index in Tensor::operator[] const.

4 years agoMove some class declarations into the .h file. 10454/head
Wolfgang Bangerth [Thu, 4 Jun 2020 03:35:12 +0000 (21:35 -0600)]
Move some class declarations into the .h file.

4 years agoFix distribution of levels in pft 10453/head
Peter Munch [Wed, 3 Jun 2020 15:42:09 +0000 (17:42 +0200)]
Fix distribution of levels in pft

4 years agorename cpp-taskflow to taskflow 10451/head
Timo Heister [Wed, 3 Jun 2020 15:27:11 +0000 (11:27 -0400)]
rename cpp-taskflow to taskflow

with the 2.5.0 release (2020/06/01), the library decided to rebrand as
"taskflow" instead of "cpp-taskflow". Reflect this change by replacing
all references in the library.

4 years agorename cpp-taskflow -> taskflow 10409/head
Timo Heister [Wed, 3 Jun 2020 15:24:15 +0000 (11:24 -0400)]
rename cpp-taskflow -> taskflow

4 years agoAdd assert on range of incoming index in Tensor::operator[] const. 10452/head
Simon Sticko [Wed, 3 Jun 2020 14:41:04 +0000 (16:41 +0200)]
Add assert on range of incoming index in Tensor::operator[] const.

4 years agoCI: windows: make test with -j1
Timo Heister [Tue, 2 Jun 2020 01:35:24 +0000 (21:35 -0400)]
CI: windows: make test with -j1

4 years agoMerge pull request #10445 from bangerth/duplication
Daniel Arndt [Tue, 2 Jun 2020 22:18:21 +0000 (18:18 -0400)]
Merge pull request #10445 from bangerth/duplication

Remove some duplicated code.

4 years agoMerge pull request #10446 from bangerth/comment
Timo Heister [Tue, 2 Jun 2020 21:13:40 +0000 (17:13 -0400)]
Merge pull request #10446 from bangerth/comment

Fix a comment in the documentation.

4 years agoGet rid of TriaObject.
Wolfgang Bangerth [Tue, 2 Jun 2020 20:35:42 +0000 (14:35 -0600)]
Get rid of TriaObject.

TriaObject was a class that was a barely disguised ArrayView, but the class
name wouldn't have told you that. It's not actually very difficult to replace
it by ArrayView, which is what this patch does.

In the process, rename the TriaObjects::get_object() function to
TriaObjects::get_bounding_object_indices() which is both a more
descriptive name of what it returns, and matches the recently
introduced set_bounding_object_indices() function.

4 years agoMerge pull request #10444 from gassmoeller/fix_zero_particle_property_output
Peter Munch [Tue, 2 Jun 2020 19:19:44 +0000 (21:19 +0200)]
Merge pull request #10444 from gassmoeller/fix_zero_particle_property_output

Fix particles data out for no particles.

4 years agoFix a comment in the documentation. 10446/head
Wolfgang Bangerth [Tue, 2 Jun 2020 18:55:00 +0000 (12:55 -0600)]
Fix a comment in the documentation.

4 years agoMerge pull request #10421 from Rombur/cuda_global
Daniel Arndt [Tue, 2 Jun 2020 18:24:58 +0000 (14:24 -0400)]
Merge pull request #10421 from Rombur/cuda_global

4 years agoRemove some duplicated code. 10445/head
Wolfgang Bangerth [Tue, 2 Jun 2020 18:06:25 +0000 (12:06 -0600)]
Remove some duplicated code.

This removes a block of 5 lines of code that is repeated again a few lines below.

4 years agoAdd test 10444/head
Rene Gassmoeller [Tue, 2 Jun 2020 18:01:35 +0000 (11:01 -0700)]
Add test

4 years agoFix particles data out for no particles.
Rene Gassmoeller [Tue, 2 Jun 2020 16:51:43 +0000 (09:51 -0700)]
Fix particles data out for no particles.

4 years agoMerge pull request #10441 from masterleinad/fix_warning_step_32
Daniel Arndt [Tue, 2 Jun 2020 14:52:30 +0000 (10:52 -0400)]
Merge pull request #10441 from masterleinad/fix_warning_step_32

Fix implicit capture warning in step-32

4 years agoFix implicit capture warning in step-32 10441/head
Daniel Arndt [Tue, 2 Jun 2020 02:26:40 +0000 (22:26 -0400)]
Fix implicit capture warning in step-32


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