]>
https://gitweb.dealii.org/ - dealii.git/log
Martin Kronbichler [Wed, 21 Oct 2020 09:30:16 +0000 (11:30 +0200)]
Restructure MappingQGeneric: Use internal header file
Martin Kronbichler [Wed, 21 Oct 2020 07:43:15 +0000 (09:43 +0200)]
Adjust test output affected by roundoff behavior.
More specifically, the old code would reject some points because the line search
did not improve due to roundoff errors, searching in the neighboring cell instead.
The new code should be more robust, but obviously changes from the previous results.
Martin Kronbichler [Mon, 19 Oct 2020 08:32:21 +0000 (10:32 +0200)]
Improve termination criterion for transform_real_to_unit_point
Also, do not project initial point to the unit cell because we might
often search outside and have a good initial guess there. But we need
a recovery strategy, which adds some code.
Peter Munch [Fri, 23 Oct 2020 10:00:02 +0000 (12:00 +0200)]
Merge pull request #11086 from kronbichler/update_mf_is_supported
Improve MatrixFree::is_supported(FiniteElement)
Martin Kronbichler [Fri, 23 Oct 2020 08:37:45 +0000 (10:37 +0200)]
Merge pull request #11081 from peterrum/fe_face_evaluation_process_and_io_restructure
MatrixFree: restructure fe_face_evaluation_process_and_io
Peter Munch [Fri, 23 Oct 2020 08:16:53 +0000 (10:16 +0200)]
Merge pull request #11089 from peterrum/get_vector_data
MatrixFree: introduce get_vector_data()
Peter Munch [Fri, 23 Oct 2020 06:22:20 +0000 (08:22 +0200)]
MatrixFree: introduce get_vector_data()
Martin Kronbichler [Fri, 23 Oct 2020 06:04:01 +0000 (08:04 +0200)]
Merge pull request #11088 from jppelteret/fix_compiler_warnings_01
Use non-reference type for copied RBL element
Martin Kronbichler [Fri, 23 Oct 2020 06:03:18 +0000 (08:03 +0200)]
Merge pull request #11071 from peterrum/partitioner_new_constructor
Partitioner + L:d:V: new constructor
Jean-Paul Pelteret [Thu, 22 Oct 2020 20:27:34 +0000 (22:27 +0200)]
Use non-reference type for copied RBL element
Martin Kronbichler [Thu, 22 Oct 2020 16:31:13 +0000 (18:31 +0200)]
Improve MatrixFree::is_supported()
Martin Kronbichler [Thu, 22 Oct 2020 17:09:03 +0000 (19:09 +0200)]
Merge pull request #11083 from drwells/improve-template-argument
Make a template argument easier to read.
David Wells [Thu, 22 Oct 2020 14:36:54 +0000 (10:36 -0400)]
Make a template argument easier to read.
clang-format gets confused here - lets just explicitly use a variable.
Martin Kronbichler [Thu, 22 Oct 2020 13:43:07 +0000 (15:43 +0200)]
Merge pull request #11080 from peterrum/rename_functions
Rename some functions in evaluation_kernels.h
Martin Kronbichler [Thu, 22 Oct 2020 11:32:36 +0000 (13:32 +0200)]
Merge pull request #11079 from peterrum/use_IsBlockVector
FEEvaluation: Simplify check for block vector
Peter Munch [Thu, 22 Oct 2020 10:27:29 +0000 (12:27 +0200)]
Restructure fe_face_evaluation_process_and_io
Peter Munch [Thu, 22 Oct 2020 09:32:31 +0000 (11:32 +0200)]
Rename some functions in evaluation_kernels.h
Peter Munch [Thu, 22 Oct 2020 09:14:29 +0000 (11:14 +0200)]
FEEvaluation: Simplify check for block vector
Martin Kronbichler [Thu, 22 Oct 2020 08:52:39 +0000 (10:52 +0200)]
Merge pull request #11069 from peterrum/ldv_matrixfree
Add incompatibility change-log entry: L:d:V in MatrixFree
Peter Munch [Wed, 21 Oct 2020 14:26:00 +0000 (16:26 +0200)]
Partitioner + L:d:V: new constructor
Daniel Arndt [Wed, 21 Oct 2020 22:47:05 +0000 (18:47 -0400)]
Merge pull request #11077 from bangerth/slepc-2
Use American English.
Wolfgang Bangerth [Wed, 21 Oct 2020 22:30:37 +0000 (16:30 -0600)]
Use American English.
Martin Kronbichler [Wed, 21 Oct 2020 15:27:51 +0000 (17:27 +0200)]
Merge pull request #11070 from peterrum/use_initialize_dof_vector
Use MatrixFree::initialize_dof_vector() at two places
Peter Munch [Wed, 21 Oct 2020 14:07:59 +0000 (16:07 +0200)]
Use MatrixFree::initialize_dof_vector() at two places
Timo Heister [Wed, 21 Oct 2020 13:43:34 +0000 (09:43 -0400)]
Merge pull request #11064 from rezarastak/fe_field_func_doc
FeFieldFunction: minor doc fix
Daniel Arndt [Wed, 21 Oct 2020 12:59:35 +0000 (08:59 -0400)]
Merge pull request #11068 from peterrum/MemorySpaceData_revert
Revert changes to MemorySpaceData
Peter Munch [Wed, 21 Oct 2020 05:33:25 +0000 (07:33 +0200)]
Add incompatibility change-log entry: L:d:V in MatrixFree
Martin Kronbichler [Wed, 21 Oct 2020 10:03:32 +0000 (12:03 +0200)]
Merge pull request #11060 from peterrum/mf_hp_parallel
Fix DoFInfo::assign_ghosts for hp in parallel
Martin Kronbichler [Wed, 21 Oct 2020 10:03:15 +0000 (12:03 +0200)]
Merge pull request #11061 from peterrum/mf_hp_parallel_log
Add change-log entry: parallel hp + MatrixFree
Peter Munch [Wed, 21 Oct 2020 05:09:36 +0000 (07:09 +0200)]
Revert changes to MemorySpaceData
Peter Munch [Tue, 20 Oct 2020 11:15:16 +0000 (13:15 +0200)]
Fix DoFInfo::assign_ghosts for hp in parallel
Daniel Arndt [Wed, 21 Oct 2020 04:34:33 +0000 (00:34 -0400)]
Merge pull request #11067 from bangerth/fesys2
Improve documentation of FESystem slightly.
Reza Rastak [Tue, 20 Oct 2020 18:25:23 +0000 (11:25 -0700)]
doc of FeFieldFunction fixed to include better cross-references
Wolfgang Bangerth [Tue, 20 Oct 2020 23:42:26 +0000 (17:42 -0600)]
Improve documentation of FESystem slightly.
Daniel Arndt [Tue, 20 Oct 2020 21:25:20 +0000 (17:25 -0400)]
Merge pull request #11065 from bangerth/5
Avoid unnecessary template argument.
Peter Munch [Tue, 20 Oct 2020 20:07:49 +0000 (22:07 +0200)]
Merge pull request #11063 from kronbichler/fix_matrix_free_communication
Ensure all communication is finished in matrix-free loops
Martin Kronbichler [Tue, 20 Oct 2020 20:00:35 +0000 (22:00 +0200)]
Merge pull request #11056 from bangerth/doc-18
Update documentation in FEFieldFunction.
Peter Munch [Tue, 20 Oct 2020 11:18:56 +0000 (13:18 +0200)]
Add changlog entry: parallel hp + MatrixFree
Wolfgang Bangerth [Tue, 20 Oct 2020 19:10:59 +0000 (13:10 -0600)]
Avoid unnecessary template argument.
Daniel Arndt [Tue, 20 Oct 2020 17:50:01 +0000 (13:50 -0400)]
Merge pull request #11059 from bangerth/property_pool
Martin Kronbichler [Tue, 20 Oct 2020 14:04:29 +0000 (16:04 +0200)]
Apply patch by Peter Munch to clean up partitioner identification
Martin Kronbichler [Tue, 20 Oct 2020 13:02:20 +0000 (15:02 +0200)]
Ensure all communication is finished in matrix-free loops
David Wells [Tue, 20 Oct 2020 13:47:18 +0000 (09:47 -0400)]
Merge pull request #10978 from bangerth/doc-17
Update documentation of MatrixTools::apply_boundary_values().
Wolfgang Bangerth [Mon, 28 Sep 2020 22:49:57 +0000 (16:49 -0600)]
Update documentation of MatrixTools::apply_boundary_values().
Wolfgang Bangerth [Tue, 20 Oct 2020 02:42:11 +0000 (20:42 -0600)]
Clarify the indentation of a test.
Wolfgang Bangerth [Tue, 20 Oct 2020 01:26:43 +0000 (19:26 -0600)]
Rename a local variable.
Wolfgang Bangerth [Tue, 20 Oct 2020 01:26:29 +0000 (19:26 -0600)]
Add commentary.
Wolfgang Bangerth [Tue, 20 Oct 2020 01:07:16 +0000 (19:07 -0600)]
Let PropertyPool keep track of the memory it allocates.
Wolfgang Bangerth [Tue, 20 Oct 2020 02:43:44 +0000 (20:43 -0600)]
Clear any properties already set when calling Particle::set_property_pool().
Wolfgang Bangerth [Tue, 20 Oct 2020 01:26:05 +0000 (19:26 -0600)]
Move the order of member variables in ParticleHandler around.
Wolfgang Bangerth [Mon, 19 Oct 2020 23:19:08 +0000 (17:19 -0600)]
Update documentation in FEFieldFunction.
Daniel Arndt [Mon, 19 Oct 2020 14:17:29 +0000 (10:17 -0400)]
Merge pull request #11049 from tjhei/improve_make_hanging_error_message
improve error message in make_hanging_node_constraints()
Martin Kronbichler [Sat, 17 Oct 2020 18:37:41 +0000 (20:37 +0200)]
Merge pull request #11047 from peterrum/mf_only_use_partitioners
MatrixFree: only use partitioner for communication for L:p:V
Martin Kronbichler [Sat, 17 Oct 2020 18:01:40 +0000 (20:01 +0200)]
Merge pull request #11045 from kronbichler/vectorize_transform_points_real_to_unit
Vectorize MappingQGeneric::transform_points_real_to_unit_cell
Martin Kronbichler [Sat, 17 Oct 2020 17:56:59 +0000 (19:56 +0200)]
Merge pull request #11051 from peterrum/ghost_indices_subset_data
Fix Partitioner::ghost_indices_subset_data for larger_ghost_index_set.size() == 0
Martin Kronbichler [Sat, 17 Oct 2020 17:21:28 +0000 (19:21 +0200)]
Merge pull request #11029 from peterrum/simplex_vtu
Generalize DataOut::write_vtu for simplex mesh
Peter Munch [Fri, 16 Oct 2020 20:53:00 +0000 (22:53 +0200)]
Fix Partitioner::ghost_indices_subset_data for larger_ghost_index_set.size() == 0
Timo Heister [Fri, 16 Oct 2020 20:23:35 +0000 (16:23 -0400)]
Merge pull request #11048 from peterrum/gc_remove_include
Remove unnecessary include
Timo Heister [Fri, 16 Oct 2020 18:17:56 +0000 (14:17 -0400)]
improve error message in make_hanging_node_constraints()
Without this, it fails with an internal error deep inside the
constraints computation.
Peter Munch [Sun, 11 Oct 2020 11:51:05 +0000 (13:51 +0200)]
Generalize DataOut::write_vtu for simplex mesh
Peter Munch [Fri, 16 Oct 2020 17:18:41 +0000 (19:18 +0200)]
Remove unnecessary include
Peter Munch [Fri, 16 Oct 2020 16:59:22 +0000 (18:59 +0200)]
MatrixFree: only use partitioner for communication for L:p:V
Martin Kronbichler [Fri, 16 Oct 2020 10:24:19 +0000 (12:24 +0200)]
Add test case
Martin Kronbichler [Thu, 15 Oct 2020 09:09:49 +0000 (11:09 +0200)]
Vectorize MappingQGeneric::transform_points_real_to_unit_cell
Peter Munch [Thu, 15 Oct 2020 19:41:13 +0000 (21:41 +0200)]
Merge pull request #11034 from kronbichler/evaluate_tensor_product_value_and_gradient
Generic evaluation of tensor product interpolation and gradient in a point
David Wells [Thu, 15 Oct 2020 17:57:57 +0000 (13:57 -0400)]
Merge pull request #11033 from bangerth/supg
Explain SUPG in step-9.
Bruno Turcksin [Thu, 15 Oct 2020 12:38:12 +0000 (08:38 -0400)]
Merge pull request #11044 from peterrum/mf_hf_getter
Add MatrixFree::get_active_fe_index and ::get_active_quadrature_index
Martin Kronbichler [Sun, 11 Oct 2020 20:36:19 +0000 (22:36 +0200)]
Test cases
Martin Kronbichler [Sun, 11 Oct 2020 20:36:06 +0000 (22:36 +0200)]
Simplify mapping implementation with new function
Martin Kronbichler [Sun, 11 Oct 2020 20:35:49 +0000 (22:35 +0200)]
Implement generic tensor production evaluation in a point
Martin Kronbichler [Sun, 11 Oct 2020 20:35:22 +0000 (22:35 +0200)]
Make a polynomial function inline to allow templated use
Peter Munch [Thu, 15 Oct 2020 04:45:14 +0000 (06:45 +0200)]
Add MatrixFree::get_active_fe_index and ::get_active_quadrature_index
Peter Munch [Wed, 14 Oct 2020 10:27:53 +0000 (12:27 +0200)]
Merge pull request #11043 from dangars/typo_parallel_documentation
Fix typo
Martin Kronbichler [Wed, 14 Oct 2020 10:23:49 +0000 (12:23 +0200)]
Merge pull request #11040 from peterrum/matrixfree_hp_sizes
Fix MF setup for hp::FECollection::size() neq hp::QCollection::size()
Daniel Garcia-Sanchez [Wed, 14 Oct 2020 09:33:46 +0000 (11:33 +0200)]
Fix typo
Wolfgang Bangerth [Wed, 14 Oct 2020 01:58:15 +0000 (19:58 -0600)]
Merge pull request #11041 from krishnakumarg1984/he_it_replace
replaces the remaining occurences of 'he' with 'it'
Wolfgang Bangerth [Wed, 14 Oct 2020 01:22:04 +0000 (19:22 -0600)]
Merge pull request #11042 from krishnakumarg1984/fix_bib
adds the bib entry for Cangiani et al. Uses it in the inline citation…
Krishnakumar Gopalakrishnan [Tue, 13 Oct 2020 23:07:26 +0000 (00:07 +0100)]
adds the bib entry for Cangiani et al. Uses it in the inline citation for FE_NOTHING class documentation
Krishnakumar Gopalakrishnan [Tue, 13 Oct 2020 22:37:57 +0000 (23:37 +0100)]
replaces the remaining occurences of 'he' with 'it'
Martin Kronbichler [Tue, 13 Oct 2020 07:08:36 +0000 (09:08 +0200)]
Merge pull request #11037 from kronbichler/fix_fe_eval_docu
Improve documentation of FEEvaluationBaseData::inverse_jacobian
Peter Munch [Tue, 13 Oct 2020 06:59:26 +0000 (08:59 +0200)]
Fix MatrixFree setup for hp::FECollection::size() neq hp::QCollection::size()
Wolfgang Bangerth [Sun, 11 Oct 2020 20:41:38 +0000 (14:41 -0600)]
Add a changelog entry.
Wolfgang Bangerth [Sun, 11 Oct 2020 20:37:48 +0000 (14:37 -0600)]
Explain SUPG in step-9.
Timo Heister [Mon, 12 Oct 2020 18:25:20 +0000 (14:25 -0400)]
Merge pull request #11031 from tjhei/gcc_segfault
work around gcc segfault in tensor.h
Daniel Arndt [Mon, 12 Oct 2020 14:03:14 +0000 (10:03 -0400)]
Merge pull request #11036 from kronbichler/remove_assertion
Matrix-free evaluation kernels: adjust check in assertion
Timo Heister [Mon, 12 Oct 2020 13:14:55 +0000 (09:14 -0400)]
move out-of class
Martin Kronbichler [Mon, 12 Oct 2020 08:11:13 +0000 (10:11 +0200)]
Improve documentation of FEEvaluationBaseData::inverse_jacobian
Martin Kronbichler [Mon, 12 Oct 2020 07:55:29 +0000 (09:55 +0200)]
Fix check in assertion
Timo Heister [Sun, 11 Oct 2020 18:14:53 +0000 (14:14 -0400)]
work around gcc segfault in tensor.h
gcc 5.4.0 with -O1 in debug mode segfaults with
```
In file included from ../include/deal.II/base/symmetric_tensor.h:25:0,
from ../include/deal.II/base/array_view.h:23,
from ../source/fe/fe_values.cc:16,
from ../source/fe/fe_values_inst4.cc:17:
../include/deal.II/base/tensor.h: In function ‘void
dealii::FEValuesViews::internal::do_function_symmetric_gradients(const
dealii::ArrayView<Number>&, const dealii::Table<2, dealii::Tensor<1,
spacedim> >&, const std::vector<typename
dealii::FEValuesViews::Vector<dim, spacedim>::ShapeFunctionData>&,
std::vector<typename dealii::ProductType<Number,
dealii::SymmetricTensor<2, spacedim> >::type>&) [with int dim = 1; int
spacedim = 1; Number = std::complex<double>; typename
dealii::FEValuesViews::Vector<dim, spacedim>::ShapeFunctionData =
dealii::FEValuesViews::Vector<1, 1>::ShapeFunctionData; typename
dealii::ProductType<Number, dealii::SymmetricTensor<2, spacedim> >::type
= dealii::SymmetricTensor<2, 1, std::complex<double> >]’:
../include/deal.II/base/tensor.h:497:35: in constexpr expansion of
‘(long unsigned int)(__first + 16u)()’
../include/deal.II/base/tensor.h:497:35: in constexpr expansion of
‘<expression error>()’
../include/deal.II/base/tensor.h:497:35: in constexpr expansion of
‘dealii::Tensor<2, 1, double>()’
../include/deal.II/base/tensor.h:497:35: in constexpr expansion of
‘(void*)__first()’
In file included from ../source/fe/fe_values_inst4.cc:17:0:
../source/fe/fe_values.cc:700:5: internal compiler error: Segmentation
fault
do_function_symmetric_gradients(
```
Work around this by changing the constructor.
Peter Munch [Sun, 11 Oct 2020 14:15:34 +0000 (16:15 +0200)]
Merge pull request #11025 from Arpit-Babbar/suggested_edits_arpit
Step-3, Step-7
Arpit Babbar [Fri, 9 Oct 2020 05:18:02 +0000 (10:48 +0530)]
Explained that template argument for SolverCG has been specified, even though it is the same as default argument(Step - 3), removed destructor and added const where the documentation indicated it(Step-7)
Timo Heister [Sat, 10 Oct 2020 14:47:31 +0000 (10:47 -0400)]
Merge pull request #11022 from masterleinad/debug_indednt
Make indent CI check abort on Doxygen warnings
Wolfgang Bangerth [Fri, 9 Oct 2020 02:39:42 +0000 (20:39 -0600)]
Merge pull request #11024 from drwells/add-boost-version-check
Add a quick check for matching boost versions.
Daniel Arndt [Fri, 9 Oct 2020 02:18:29 +0000 (22:18 -0400)]
Work around depreactions in QProjector
David Wells [Fri, 9 Oct 2020 00:58:44 +0000 (20:58 -0400)]
Add a quick check for matching boost versions.
This addresses a problem a user had recently with inscrutable crashes caused by
mixed boost versions. Credit goes to Daniel Jodlbauer for reporting the issue.
Daniel Arndt [Thu, 8 Oct 2020 21:58:29 +0000 (17:58 -0400)]
One more
Daniel Arndt [Thu, 8 Oct 2020 21:43:12 +0000 (17:43 -0400)]
Fix some more
Daniel Arndt [Thu, 8 Oct 2020 18:23:08 +0000 (14:23 -0400)]
Fix doxygen warnings
Daniel Arndt [Thu, 8 Oct 2020 18:13:42 +0000 (14:13 -0400)]
Make indent CI check abort on Doxygen warnings
Peter Munch [Thu, 8 Oct 2020 18:03:15 +0000 (20:03 +0200)]
Merge pull request #11021 from kronbichler/array_view_const
Make ArrayView argument const
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