]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
9 years agocommunicate copy_indices
Timo Heister [Sun, 5 Jul 2015 17:00:25 +0000 (13:00 -0400)]
communicate copy_indices

We need to do a parallel communication step for copy_indices in
MGTransfer. Simply make it work for now.

9 years agoimprove test
Timo Heister [Sun, 5 Jul 2015 16:54:51 +0000 (12:54 -0400)]
improve test

9 years agotest cleanup
Timo Heister [Sun, 5 Jul 2015 16:32:38 +0000 (12:32 -0400)]
test cleanup

disable debug printing that fails in release mode (indices not sorted).

9 years agofix bug in MGConstrainedDofs
Timo Heister [Sun, 5 Jul 2015 16:31:20 +0000 (12:31 -0400)]
fix bug in MGConstrainedDofs

9 years agoadd failing test
Timo Heister [Sat, 4 Jul 2015 11:23:48 +0000 (07:23 -0400)]
add failing test

9 years agoadd CellID::str()
Timo Heister [Sat, 4 Jul 2015 11:23:24 +0000 (07:23 -0400)]
add CellID::str()

9 years agoadd test
Timo Heister [Tue, 30 Jun 2015 15:02:40 +0000 (11:02 -0400)]
add test

9 years agoreplace get_boundary_indices
Timo Heister [Sat, 27 Jun 2015 12:19:55 +0000 (08:19 -0400)]
replace get_boundary_indices

use IndexSet instead

9 years agowork on step-50
Timo Heister [Sun, 19 Apr 2015 18:21:12 +0000 (14:21 -0400)]
work on step-50

9 years agostep-50 debugging work
Timo Heister [Fri, 17 Apr 2015 15:59:26 +0000 (11:59 -0400)]
step-50 debugging work

9 years agoMerge branch 'master' into parmg
Timo Heister [Thu, 19 Mar 2015 01:17:53 +0000 (19:17 -0600)]
Merge branch 'master' into parmg

Conflicts:
examples/step-50/step-50.cc

9 years agoMerge pull request #667 from bangerth/augment-error-messages
Timo Heister [Wed, 18 Mar 2015 22:02:33 +0000 (16:02 -0600)]
Merge pull request #667 from bangerth/augment-error-messages

Augment all error messages in the numerics/ directory

9 years agoAddress Timo's comments from review. Also rename namespace DataOutExceptions to Excep... 667/head
Wolfgang Bangerth [Wed, 18 Mar 2015 20:21:46 +0000 (15:21 -0500)]
Address Timo's comments from review. Also rename namespace DataOutExceptions to Exceptions::DataOut.

9 years agoUnify exceptions throughout the DataOut* classes.
Wolfgang Bangerth [Wed, 18 Mar 2015 01:29:35 +0000 (20:29 -0500)]
Unify exceptions throughout the DataOut* classes.

9 years agoAdjust error messages in the VectorTools namespace.
Wolfgang Bangerth [Sun, 15 Mar 2015 06:57:52 +0000 (01:57 -0500)]
Adjust error messages in the VectorTools namespace.

9 years agoAdjust error messages in the TimeDependent class and friends.
Wolfgang Bangerth [Sun, 15 Mar 2015 06:48:11 +0000 (01:48 -0500)]
Adjust error messages in the TimeDependent class and friends.

9 years agoAdjust error messages in the SolutionTransfer class.
Wolfgang Bangerth [Sun, 15 Mar 2015 06:38:43 +0000 (01:38 -0500)]
Adjust error messages in the SolutionTransfer class.

9 years agoAdjust error messages in the PointValueHistory class.
Wolfgang Bangerth [Sun, 15 Mar 2015 06:29:28 +0000 (01:29 -0500)]
Adjust error messages in the PointValueHistory class.

9 years agoAdjust error messages in the error estimator class.
Wolfgang Bangerth [Sun, 15 Mar 2015 06:28:52 +0000 (01:28 -0500)]
Adjust error messages in the error estimator class.

9 years agoAdjust error messages in the Histogram class.
Wolfgang Bangerth [Sun, 15 Mar 2015 06:19:58 +0000 (01:19 -0500)]
Adjust error messages in the Histogram class.

9 years agoImprove error messages in DerivativeApproximation.
Wolfgang Bangerth [Sun, 15 Mar 2015 05:50:28 +0000 (00:50 -0500)]
Improve error messages in DerivativeApproximation.

9 years agoGo through all error messages for the data_out_* assertions.
Wolfgang Bangerth [Sun, 15 Mar 2015 05:38:39 +0000 (00:38 -0500)]
Go through all error messages for the data_out_* assertions.

9 years agoMerge pull request #669 from kronbichler/master
Wolfgang Bangerth [Tue, 17 Mar 2015 07:45:59 +0000 (02:45 -0500)]
Merge pull request #669 from kronbichler/master

Fix warning by removing unused code

9 years agoFix warning by removing unused code 669/head
Martin Kronbichler [Tue, 17 Mar 2015 06:58:23 +0000 (07:58 +0100)]
Fix warning by removing unused code

9 years agoMerge pull request #668 from tamiko/fix_trilinos_tpl_includes
Martin Kronbichler [Mon, 16 Mar 2015 16:16:27 +0000 (17:16 +0100)]
Merge pull request #668 from tamiko/fix_trilinos_tpl_includes

CMake: Bugfix: Make the requirement for Trilinos_TPL_INCLUDE_DIRS optional

9 years agoCMake: Bugfix: Make the requirement for Trilinos_TPL_INCLUDE_DIRS optional 668/head
Matthias Maier [Mon, 16 Mar 2015 16:02:57 +0000 (17:02 +0100)]
CMake: Bugfix: Make the requirement for Trilinos_TPL_INCLUDE_DIRS optional

9 years agoMerge pull request #665 from tamiko/fix_trilinos_tpl_includes 195/head
Martin Kronbichler [Mon, 16 Mar 2015 12:57:30 +0000 (13:57 +0100)]
Merge pull request #665 from tamiko/fix_trilinos_tpl_includes

CMake: Bugfix: Use Trilinos third party header locations

9 years agoMerge pull request #666 from bangerth/add-assertion
Timo Heister [Mon, 16 Mar 2015 03:23:14 +0000 (21:23 -0600)]
Merge pull request #666 from bangerth/add-assertion

Add an assertion to GridGenerator::create_union_triangulation().

9 years agoMerge pull request #662 from kronbichler/master
Martin Kronbichler [Sun, 15 Mar 2015 06:54:19 +0000 (07:54 +0100)]
Merge pull request #662 from kronbichler/master

Fix call to compress in reinit of Trilinos sparse matrix

9 years agoAdd an assertion to GridGenerator::create_union_triangulation(). 666/head
Wolfgang Bangerth [Sun, 15 Mar 2015 04:48:07 +0000 (23:48 -0500)]
Add an assertion to GridGenerator::create_union_triangulation().

9 years agoCMake: Bugfix: Use Trilinos third party header locations 665/head
Matthias Maier [Sun, 15 Mar 2015 00:35:49 +0000 (01:35 +0100)]
CMake: Bugfix: Use Trilinos third party header locations

Also append Trilinos_TPL_INCLUDE_DIRS to TRILINOS_INCLUDE_DIRS

9 years agoMerge pull request #663 from bangerth/add-gridgenerator-create_triangulation_without_...
Martin Kronbichler [Fri, 13 Mar 2015 14:24:43 +0000 (15:24 +0100)]
Merge pull request #663 from bangerth/add-gridgenerator-create_triangulation_without_cells

Add GridGenerator::create_triangulation_with_removed_cells().

9 years agoAugment a changelog entry to say where the user can find this class. 663/head
Wolfgang Bangerth [Fri, 13 Mar 2015 13:19:06 +0000 (08:19 -0500)]
Augment a changelog entry to say where the user can find this class.

9 years agoAdd GridGenerator::create_triangulation_with_removed_cells().
Wolfgang Bangerth [Fri, 13 Mar 2015 13:17:41 +0000 (08:17 -0500)]
Add GridGenerator::create_triangulation_with_removed_cells().

9 years agoFix description of what the test does.
Wolfgang Bangerth [Fri, 13 Mar 2015 12:54:32 +0000 (07:54 -0500)]
Fix description of what the test does.

9 years agoMake sure to call compress() in test 662/head
Martin Kronbichler [Fri, 13 Mar 2015 12:48:34 +0000 (13:48 +0100)]
Make sure to call compress() in test

9 years agoFix call to compress in reinit of Trilinos sparse matrix
Martin Kronbichler [Fri, 13 Mar 2015 08:36:32 +0000 (09:36 +0100)]
Fix call to compress in reinit of Trilinos sparse matrix

9 years agoMerge pull request #654 from bangerth/doc-updates-6
Wolfgang Bangerth [Thu, 12 Mar 2015 14:53:15 +0000 (09:53 -0500)]
Merge pull request #654 from bangerth/doc-updates-6

Doc updates 6

9 years agoLink to the discussion of the 'goto' in step-26. 654/head
Wolfgang Bangerth [Wed, 11 Mar 2015 02:20:10 +0000 (21:20 -0500)]
Link to the discussion of the 'goto' in step-26.

9 years agoDocument the use and reasoning of goto in step-26.
Wolfgang Bangerth [Wed, 11 Mar 2015 00:41:18 +0000 (19:41 -0500)]
Document the use and reasoning of goto in step-26.

9 years agoMerge pull request #644 from bangerth/explain-operator-or
Matthias Maier [Thu, 12 Mar 2015 10:24:35 +0000 (11:24 +0100)]
Merge pull request #644 from bangerth/explain-operator-or

Explain the use of operator| for the update_* flags.

9 years agoMerge pull request #658 from bangerth/remove-exceptions-without-arguments-5
Martin Kronbichler [Thu, 12 Mar 2015 07:46:47 +0000 (08:46 +0100)]
Merge pull request #658 from bangerth/remove-exceptions-without-arguments-5

Improve what an exception says.

9 years agoImprove what an exception says. 658/head
Wolfgang Bangerth [Thu, 12 Mar 2015 01:36:58 +0000 (20:36 -0500)]
Improve what an exception says.

This happens to be a case one of my students ran into today. Again for #610.

9 years agoMerge pull request #214 from Rombur/muelu
Bruno Turcksin [Wed, 11 Mar 2015 21:46:55 +0000 (16:46 -0500)]
Merge pull request #214 from Rombur/muelu

9 years agoAdd MueLu preconditioner using MueLu::MLParameterListInterpreter. 214/head
Bruno Turcksin [Mon, 6 Oct 2014 14:31:30 +0000 (09:31 -0500)]
Add MueLu preconditioner using MueLu::MLParameterListInterpreter.

9 years agoMerge pull request #616 from bangerth/remove-deprecated-functions-14
Martin Kronbichler [Wed, 11 Mar 2015 20:12:03 +0000 (21:12 +0100)]
Merge pull request #616 from bangerth/remove-deprecated-functions-14

Remove deprecated functions 14

9 years agoMerge pull request #656 from tcclevenger/fix_wiki_links
Wolfgang Bangerth [Wed, 11 Mar 2015 19:17:04 +0000 (14:17 -0500)]
Merge pull request #656 from tcclevenger/fix_wiki_links

Fixed Wiki links in README

9 years agoFixed Wiki links in README 656/head
tcclevenger [Wed, 11 Mar 2015 18:40:21 +0000 (14:40 -0400)]
Fixed Wiki links in README

9 years agoReindent. 616/head
Wolfgang Bangerth [Mon, 9 Mar 2015 22:18:18 +0000 (17:18 -0500)]
Reindent.

9 years agoAdjust test output.
Wolfgang Bangerth [Mon, 9 Mar 2015 22:17:45 +0000 (17:17 -0500)]
Adjust test output.

Apparently the previous couple of commits also fixed a test that previously
produced output that I cannot explain and that now looks completely reasonable.

9 years agoFollow Martin K's advice on what the argument should be.
Wolfgang Bangerth [Mon, 9 Mar 2015 19:52:19 +0000 (14:52 -0500)]
Follow Martin K's advice on what the argument should be.

9 years agoDocument changes in semantics to apply_boundary_values.
Wolfgang Bangerth [Mon, 9 Mar 2015 19:48:33 +0000 (14:48 -0500)]
Document changes in semantics to apply_boundary_values.

9 years agoDocument changes to TrilinosWrappers::SparseMatrix::clear_row().
Wolfgang Bangerth [Mon, 9 Mar 2015 19:16:03 +0000 (14:16 -0500)]
Document changes to TrilinosWrappers::SparseMatrix::clear_row().

While there, also remove the second, nonsensical call to compress().

9 years agoClone the _04 test and also check const_iterators.
Wolfgang Bangerth [Mon, 9 Mar 2015 19:15:11 +0000 (14:15 -0500)]
Clone the _04 test and also check const_iterators.

9 years agoEnsure that we can run iterators over Trilinos matrices that are not stored locally.
Wolfgang Bangerth [Mon, 9 Mar 2015 05:11:44 +0000 (00:11 -0500)]
Ensure that we can run iterators over Trilinos matrices that are not stored locally.

9 years agoUpdate comments.
Wolfgang Bangerth [Mon, 9 Mar 2015 03:22:16 +0000 (22:22 -0500)]
Update comments.

In particular, avoid unclear use of language for end() iterators, and
avoid references to the STL that only old-timers still
understand. Also talk about the semantics in the parallel context.

9 years agoUpdate comments.
Wolfgang Bangerth [Mon, 9 Mar 2015 03:13:33 +0000 (22:13 -0500)]
Update comments.

In particular, avoid unclear use of language for end() iterators, and
avoid references to the STL that only old-timers still understand.

9 years agoMerge pull request #652 from drwells/step-20-compressed-sparsity
Wolfgang Bangerth [Sun, 8 Mar 2015 22:24:12 +0000 (17:24 -0500)]
Merge pull request #652 from drwells/step-20-compressed-sparsity

Use `BlockCompressedSparsityPattern` in step-20.

9 years agoUse `BlockCompressedSparsityPattern` in step-20. 652/head
David Wells [Sat, 7 Mar 2015 15:58:29 +0000 (10:58 -0500)]
Use `BlockCompressedSparsityPattern` in step-20.
Step-20 now introduces the block compressed sparsity pattern. This
should close issue 306.

9 years agoRemove deprecated function TrilinosWrappers::SparseMatrix::compress() without argument.
Wolfgang Bangerth [Fri, 27 Feb 2015 19:56:25 +0000 (13:56 -0600)]
Remove deprecated function TrilinosWrappers::SparseMatrix::compress() without argument.

9 years agoRemove deprecated function BlockMatrixBase::compress() without argument.
Wolfgang Bangerth [Fri, 27 Feb 2015 19:56:11 +0000 (13:56 -0600)]
Remove deprecated function BlockMatrixBase::compress() without argument.

9 years agoAvoid calls to naked compress() without a VectorOperation argument.
Wolfgang Bangerth [Fri, 27 Feb 2015 19:55:27 +0000 (13:55 -0600)]
Avoid calls to naked compress() without a VectorOperation argument.

9 years agoRemove a test.
Wolfgang Bangerth [Fri, 27 Feb 2015 19:42:38 +0000 (13:42 -0600)]
Remove a test.

This test mixes add and write access to a Trilinos sparse matrix. This does not work reliably and is, I think, not an operation we want to support as it cannot be done efficiently.

9 years agoMerge pull request #651 from bangerth/doc-fixes-11
Timo Heister [Fri, 6 Mar 2015 21:07:27 +0000 (16:07 -0500)]
Merge pull request #651 from bangerth/doc-fixes-11

Update documentation in a small way.

9 years agoUpdate documentation in a small way. 651/head
Wolfgang Bangerth [Fri, 6 Mar 2015 21:00:52 +0000 (15:00 -0600)]
Update documentation in a small way.

9 years agoMerge pull request #649 from bangerth/doc-fixes-10
Timo Heister [Thu, 5 Mar 2015 23:16:36 +0000 (18:16 -0500)]
Merge pull request #649 from bangerth/doc-fixes-10

Doc fixes 10

9 years agoProvide a reference to step-14. 649/head
Wolfgang Bangerth [Thu, 5 Mar 2015 22:55:35 +0000 (16:55 -0600)]
Provide a reference to step-14.

9 years agoSignificantly improve an error message.
Wolfgang Bangerth [Thu, 5 Mar 2015 22:45:40 +0000 (16:45 -0600)]
Significantly improve an error message.

Addresses #610.

9 years agoMerge pull request #648 from QiaoLei-88/step33DocIssue
Wolfgang Bangerth [Thu, 5 Mar 2015 22:06:13 +0000 (16:06 -0600)]
Merge pull request #648 from QiaoLei-88/step33DocIssue

Step33 doc issue (#646)

9 years agoFix a typo.
Wolfgang Bangerth [Thu, 5 Mar 2015 22:00:27 +0000 (16:00 -0600)]
Fix a typo.

9 years agocorrect type of output example from 'code' to 'verbatim' 648/head
Lei Qiao [Thu, 5 Mar 2015 17:53:37 +0000 (11:53 -0600)]
correct type of output example from 'code' to 'verbatim'

9 years agofix mathbf and braces issues
Lei Qiao [Thu, 5 Mar 2015 17:46:59 +0000 (11:46 -0600)]
fix mathbf and braces issues

9 years agoMerge pull request #647 from QiaoLei-88/fixStep33Intro
Martin Kronbichler [Thu, 5 Mar 2015 07:14:27 +0000 (08:14 +0100)]
Merge pull request #647 from QiaoLei-88/fixStep33Intro

fix formula error in intro and result parts of step-33 #646

9 years agofix bracket mismatch in result part of step-33 647/head
Lei Qiao [Thu, 5 Mar 2015 04:33:09 +0000 (22:33 -0600)]
fix bracket mismatch in result part of step-33

9 years agofix formula error in intro of step-33 #646
Lei Qiao [Thu, 5 Mar 2015 04:12:03 +0000 (22:12 -0600)]
fix formula error in intro of step-33 #646

9 years agoMerge pull request #640 from bangerth/further-exception-cleanups-2
Timo Heister [Thu, 5 Mar 2015 02:36:35 +0000 (21:36 -0500)]
Merge pull request #640 from bangerth/further-exception-cleanups-2

More exception cleanups

9 years agoOne more exception conversion. 640/head
Wolfgang Bangerth [Wed, 4 Mar 2015 13:33:12 +0000 (07:33 -0600)]
One more exception conversion.

9 years agoAvoid exceptions that take references to their arguments -- it's not clear that this...
Wolfgang Bangerth [Wed, 4 Mar 2015 02:42:00 +0000 (20:42 -0600)]
Avoid exceptions that take references to their arguments -- it's not clear that this would work reliably.

9 years agoMerge pull request #645 from rosskynch/fix_642
Wolfgang Bangerth [Wed, 4 Mar 2015 23:03:56 +0000 (17:03 -0600)]
Merge pull request #645 from rosskynch/fix_642

Fix issue #642

9 years agoRemoved p=3 case as it takes far too long to run (issue #642). Test is still valid... 645/head
Ross Kynch [Wed, 4 Mar 2015 16:49:18 +0000 (16:49 +0000)]
Removed p=3 case as it takes far too long to run (issue #642). Test is still valid as the solution should be exact at p=2

9 years agoExplain the use of operator| for the update_* flags. 644/head
Wolfgang Bangerth [Wed, 4 Mar 2015 16:30:27 +0000 (10:30 -0600)]
Explain the use of operator| for the update_* flags.

9 years agoMerge pull request #643 from tjhei/fe_field_fct_exc
Wolfgang Bangerth [Wed, 4 Mar 2015 16:26:18 +0000 (10:26 -0600)]
Merge pull request #643 from tjhei/fe_field_fct_exc

Use and document VectorTools::ExcPointNotAvailableHere

9 years agoUse and document VectorTools::ExcPointNotAvailableHere 643/head
Timo Heister [Wed, 4 Mar 2015 15:56:57 +0000 (10:56 -0500)]
Use and document VectorTools::ExcPointNotAvailableHere

ExcPointNotAvailableHere is duplicated in VectorTools and
FEFieldFunction and is awkward to use in the latter because of the
template arguments.

- provide textual description of Exception
- deprecate the version in FEFieldFunction
- update documentation
- update test

9 years agoMerge pull request #639 from bangerth/clarify-step-8
Wolfgang Bangerth [Wed, 4 Mar 2015 13:32:19 +0000 (07:32 -0600)]
Merge pull request #639 from bangerth/clarify-step-8

Clarify a statement in the documentation of step-8.

9 years agoClarify a statement in the documentation of step-8. 639/head
Wolfgang Bangerth [Wed, 4 Mar 2015 00:49:54 +0000 (18:49 -0600)]
Clarify a statement in the documentation of step-8.

9 years agoProvide a changes.h entry.
Wolfgang Bangerth [Wed, 4 Mar 2015 02:40:05 +0000 (20:40 -0600)]
Provide a changes.h entry.

9 years agoMinor code cleanup.
Wolfgang Bangerth [Wed, 4 Mar 2015 02:37:30 +0000 (20:37 -0600)]
Minor code cleanup.

9 years agoMore improvements on exceptions with no message.
Wolfgang Bangerth [Wed, 4 Mar 2015 02:36:48 +0000 (20:36 -0600)]
More improvements on exceptions with no message.

9 years agoMerge pull request #631 from davydden/tensor
Wolfgang Bangerth [Mon, 2 Mar 2015 18:51:24 +0000 (12:51 -0600)]
Merge pull request #631 from davydden/tensor

Extra functionality of Tensor class

9 years agoallow contraction of tensors of different base type 631/head
Denis Davydov [Wed, 4 Feb 2015 14:20:03 +0000 (15:20 +0100)]
allow contraction of tensors of different base type

9 years agoMerge pull request #634 from bangerth/revert-previous-commit
Wolfgang Bangerth [Mon, 2 Mar 2015 16:53:27 +0000 (10:53 -0600)]
Merge pull request #634 from bangerth/revert-previous-commit

Revert commit e86e602ae14.

9 years agoRevert commit e86e602ae14. 634/head
Wolfgang Bangerth [Mon, 2 Mar 2015 16:52:20 +0000 (10:52 -0600)]
Revert commit e86e602ae14.

This undoes the changes of commit  13796ae50a7ac24 (through issue #621) that don't compile of their own.

9 years agoMerge pull request #632 from davydden/error_estimator
Wolfgang Bangerth [Mon, 2 Mar 2015 15:14:59 +0000 (09:14 -0600)]
Merge pull request #632 from davydden/error_estimator

templating ParallelData in error_estimator

9 years agoMerge pull request #633 from bangerth/accelerate-indent
Martin Kronbichler [Mon, 2 Mar 2015 15:11:25 +0000 (16:11 +0100)]
Merge pull request #633 from bangerth/accelerate-indent

Accelerate indent

9 years agoIndent files that had been forgotten by the indentation script. 633/head
Wolfgang Bangerth [Mon, 2 Mar 2015 15:07:35 +0000 (09:07 -0600)]
Indent files that had been forgotten by the indentation script.

9 years agoAccelerate indentation of all files from 7 to 1.1 seconds.
Wolfgang Bangerth [Mon, 2 Mar 2015 15:06:55 +0000 (09:06 -0600)]
Accelerate indentation of all files from 7 to 1.1 seconds.

9 years agopatched error_estimator 632/head
Denis Davydov [Wed, 4 Feb 2015 14:20:16 +0000 (15:20 +0100)]
patched error_estimator

9 years agoMerge pull request #630 from bangerth/fix-symmetric-tensor-product-type
Timo Heister [Mon, 2 Mar 2015 14:47:55 +0000 (09:47 -0500)]
Merge pull request #630 from bangerth/fix-symmetric-tensor-product-type

Add ProductType description also for SymmetricTensor. Address issue #600

9 years agoAdd ProductType description also for SymmetricTensor. 630/head
Wolfgang Bangerth [Mon, 2 Mar 2015 14:45:46 +0000 (08:45 -0600)]
Add ProductType description also for SymmetricTensor.

9 years agoMerge pull request #625 from bangerth/further-exception-cleanups
Wolfgang Bangerth [Mon, 2 Mar 2015 14:42:53 +0000 (08:42 -0600)]
Merge pull request #625 from bangerth/further-exception-cleanups

Further additions of error texts for exceptions.


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