]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
4 years agoFix some coverity complains 9337/head
Daniel Arndt [Wed, 15 Jan 2020 16:14:00 +0000 (09:14 -0700)]
Fix some coverity complains

4 years agoMerge pull request #9281 from tjhei/github-ci
Daniel Arndt [Mon, 13 Jan 2020 20:09:09 +0000 (13:09 -0700)]
Merge pull request #9281 from tjhei/github-ci

use github CI for OSX

4 years agoMerge pull request #9282 from tjhei/update_git_export
Daniel Arndt [Mon, 13 Jan 2020 18:23:28 +0000 (11:23 -0700)]
Merge pull request #9282 from tjhei/update_git_export

update .gitattributes

4 years agoMerge pull request #9293 from krishnakumarg1984/step6_fixes_krishna
Wolfgang Bangerth [Mon, 13 Jan 2020 17:49:03 +0000 (10:49 -0700)]
Merge pull request #9293 from krishnakumarg1984/step6_fixes_krishna

minor grammar fixes to step-6 tutorial doc

4 years agoupdate .gitattributes 9282/head
Timo Heister [Fri, 10 Jan 2020 18:27:17 +0000 (13:27 -0500)]
update .gitattributes

- add .github/ and contrib/ci/ and Jenkinsfile to ignore list
- reorder things

4 years agoMerge pull request #9286 from bangerth/jump-average
Timo Heister [Mon, 13 Jan 2020 13:18:50 +0000 (08:18 -0500)]
Merge pull request #9286 from bangerth/jump-average

Introduce \jump and \average commands to be used in the documentation.

4 years agoMerge pull request #9289 from peterrum/step18-removeinclude
Timo Heister [Mon, 13 Jan 2020 13:18:17 +0000 (08:18 -0500)]
Merge pull request #9289 from peterrum/step18-removeinclude

Remove filtered_iterator include in step-18

4 years agoMerge pull request #9291 from krishnakumarg1984/krishna_fix_kellyestimator_doc
Timo Heister [Mon, 13 Jan 2020 13:18:05 +0000 (08:18 -0500)]
Merge pull request #9291 from krishnakumarg1984/krishna_fix_kellyestimator_doc

In the doc for KellyErrorEstimator class, trying to fix couple of doxygen links

4 years agoIn the doc for KellyErrorEstimator class, trying to fix doxygen links to couple of... 9291/head
Krishnakumar Gopalakrishnan [Sun, 12 Jan 2020 17:01:45 +0000 (17:01 +0000)]
In the doc for KellyErrorEstimator class, trying to fix doxygen links to couple of functions in the GridRefinement namespace

fixes a typo (gradiend) in the documentation of KellyErrorEstimator class

Update include/deal.II/numerics/error_estimator.h

Co-Authored-By: Timo Heister <timo.heister@gmail.com>
Update include/deal.II/numerics/error_estimator.h

Co-Authored-By: Timo Heister <timo.heister@gmail.com>
trying to reindent the pull request

4 years agoMerge pull request #9290 from tjhei/fix_write_vtu_in_parallel_partly_empty
Daniel Arndt [Mon, 13 Jan 2020 06:16:25 +0000 (01:16 -0500)]
Merge pull request #9290 from tjhei/fix_write_vtu_in_parallel_partly_empty

fix write_vtu_in_parallel invalid file if partly empty

4 years agoMerge pull request #9295 from krishnakumarg1984/step6_krishna_fix_boundarydoc
David Wells [Sun, 12 Jan 2020 20:39:36 +0000 (15:39 -0500)]
Merge pull request #9295 from krishnakumarg1984/step6_krishna_fix_boundarydoc

fixes stale documentation about boundary_object for hyper_ball function

4 years agoUpdate examples/step-6/step-6.cc 9293/head
Krishnakumar Gopalakrishnan [Sun, 12 Jan 2020 20:31:03 +0000 (20:31 +0000)]
Update examples/step-6/step-6.cc

Co-Authored-By: David Wells <drwells@email.unc.edu>
4 years agofixes stale documentation about boundary_object for hyper_ball function 9295/head
Krishnakumar Gopalakrishnan [Sun, 12 Jan 2020 19:09:23 +0000 (19:09 +0000)]
fixes stale documentation about boundary_object for hyper_ball function

4 years agominor grammar fixes to step-6 tutorial doc
Krishnakumar Gopalakrishnan [Sun, 12 Jan 2020 18:32:35 +0000 (18:32 +0000)]
minor grammar fixes to step-6 tutorial doc

4 years agofix write_vtu_in_parallel invalid file if partly empty 9290/head
Timo Heister [Sun, 12 Jan 2020 16:32:36 +0000 (11:32 -0500)]
fix write_vtu_in_parallel invalid file if partly empty

Fix generating an invalid vtu file when the first piece written is empty
(this will crash paraview). There is no reason to write empty pieces
anyway, so just skip them.

4 years agoRemove reference to step-18 9289/head
Peter Munch [Sun, 12 Jan 2020 10:12:50 +0000 (11:12 +0100)]
Remove reference to step-18

4 years agoRemove filtered_iterator include in step-18
Peter Munch [Sun, 12 Jan 2020 08:03:27 +0000 (09:03 +0100)]
Remove filtered_iterator include in step-18

4 years agoUse \jump and \average commands in the documentation. 9286/head
Wolfgang Bangerth [Sat, 11 Jan 2020 04:24:39 +0000 (21:24 -0700)]
Use \jump and \average commands in the documentation.

This makes sure that we can be consistent in how we denote these operators:
single or double brackets/braces; with or without spaces, etc.

4 years agoIntroduce \jump and \average commands to be used in the documentation.
Wolfgang Bangerth [Sat, 11 Jan 2020 04:23:49 +0000 (21:23 -0700)]
Introduce \jump and \average commands to be used in the documentation.

4 years agoMerge pull request #9284 from bangerth/coloneq
David Wells [Sat, 11 Jan 2020 15:05:45 +0000 (10:05 -0500)]
Merge pull request #9284 from bangerth/coloneq

Fix \coloneq again.

4 years agoMerge pull request #9285 from masterleinad/fix_gcc_4.9.4
David Wells [Sat, 11 Jan 2020 14:52:25 +0000 (09:52 -0500)]
Merge pull request #9285 from masterleinad/fix_gcc_4.9.4

Avoid gcc-4.9.4 error

4 years agoMerge pull request #9283 from masterleinad/remove_tensoe_cc
David Wells [Sat, 11 Jan 2020 14:51:56 +0000 (09:51 -0500)]
Merge pull request #9283 from masterleinad/remove_tensoe_cc

Remove tensor.cc

4 years agoAvoid gcc-4.9 error 9285/head
Daniel Arndt [Sat, 11 Jan 2020 05:43:49 +0000 (00:43 -0500)]
Avoid gcc-4.9 error

4 years agoFix \coloneq again. 9284/head
Wolfgang Bangerth [Sat, 11 Jan 2020 04:16:49 +0000 (21:16 -0700)]
Fix \coloneq again.

4 years agoRemove tensor.cc 9283/head
Daniel Arndt [Fri, 10 Jan 2020 18:25:48 +0000 (13:25 -0500)]
Remove tensor.cc

4 years agoMerge pull request #9268 from masterleinad/use_assert_index_range
Daniel Arndt [Sat, 11 Jan 2020 03:31:14 +0000 (22:31 -0500)]
Merge pull request #9268 from masterleinad/use_assert_index_range

Use AssertIndexRange some more

4 years agoUse AssertIndexRange 9268/head
Daniel Arndt [Wed, 8 Jan 2020 19:24:53 +0000 (14:24 -0500)]
Use AssertIndexRange

4 years agoRemove specialization for GeometryInfo<1>::face_to_cell_lines
Daniel Arndt [Thu, 9 Jan 2020 18:39:48 +0000 (13:39 -0500)]
Remove specialization for GeometryInfo<1>::face_to_cell_lines

4 years agoFix external declaration of Tensor::n_independent_components
Daniel Arndt [Thu, 9 Jan 2020 22:44:46 +0000 (17:44 -0500)]
Fix external declaration of Tensor::n_independent_components

4 years agoMerge pull request #9240 from masterleinad/use_more_range_based_for_loops
Daniel Arndt [Fri, 10 Jan 2020 03:53:24 +0000 (22:53 -0500)]
Merge pull request #9240 from masterleinad/use_more_range_based_for_loops

Turn all for loops using "begin_active" into ranged-based ones

4 years agoMerge pull request #9266 from marcfehling/fix-amesos
Matthias Maier [Fri, 10 Jan 2020 01:55:08 +0000 (19:55 -0600)]
Merge pull request #9266 from marcfehling/fix-amesos

CMake: Check whether Trilinos has been configured with third-party libraries.

4 years agoMerge pull request #9276 from bangerth/spacing
Matthias Maier [Fri, 10 Jan 2020 01:53:54 +0000 (19:53 -0600)]
Merge pull request #9276 from bangerth/spacing

Let latex figure out spacing itself.

4 years agoMerge pull request #9277 from bangerth/coloneq
Matthias Maier [Fri, 10 Jan 2020 01:53:24 +0000 (19:53 -0600)]
Merge pull request #9277 from bangerth/coloneq

Fix the dealcoloneq command.

4 years agoMerge pull request #9273 from krishnakumarg1984/gender_neutral_wording
Wolfgang Bangerth [Thu, 9 Jan 2020 23:42:15 +0000 (16:42 -0700)]
Merge pull request #9273 from krishnakumarg1984/gender_neutral_wording

Rewrite wording in headers/docs such that we now have gender neutral wording throughout

4 years agoreword the few sections of library to be compliant with gender-neutral wording. 9273/head
Krishnakumar Gopalakrishnan [Thu, 9 Jan 2020 19:14:08 +0000 (19:14 +0000)]
reword the few sections of library to be compliant with gender-neutral wording.

Gender neutral-wording for existing female-pronouns etc. She-> they. Her->their

fixes a usage of he->they missed in previous commit

undo the changes to the files inside bundled/ that were touched upon by earlier commits

4 years agoMerge pull request #9274 from krishnakumarg1984/fix_typo_he_the
Wolfgang Bangerth [Thu, 9 Jan 2020 23:27:46 +0000 (16:27 -0700)]
Merge pull request #9274 from krishnakumarg1984/fix_typo_he_the

fixes a keyboard fat-fingering typo wherever 'he' in incorrectly used instead of 'the'

4 years agofixes a keyboard fat-fingering typo wherever 'he' in incorrectly used instead of... 9274/head
Krishnakumar Gopalakrishnan [Thu, 9 Jan 2020 19:37:24 +0000 (19:37 +0000)]
fixes a keyboard fat-fingering typo wherever 'he' in incorrectly used instead of 'the'

fixes another file wherein the he/the typo was present

fixes the use of 'he' to 'they' missed in earlier commit

Revert "fixes the use of 'he' to 'they' missed in earlier commit"

This reverts commit ca87c5049968f5c5f34ec341ba060325a8f90301.

undoing the changes to files in bundled/ by previous commits

4 years agoFix the dealcoloneq command. 9277/head
Wolfgang Bangerth [Thu, 9 Jan 2020 20:36:32 +0000 (13:36 -0700)]
Fix the dealcoloneq command.

It leads to funny spacing in latex (non-MathJax) mode because we accidentally
delimited only the ':' with the mathrel command, when we really wanted all of
the ':=' to be the operator.

4 years agoLet latex figure out spacing itself. 9276/head
Wolfgang Bangerth [Thu, 9 Jan 2020 20:19:58 +0000 (13:19 -0700)]
Let latex figure out spacing itself.

4 years agoMerge pull request #9275 from krishnakumarg1984/fix_he_it_typo
Wolfgang Bangerth [Thu, 9 Jan 2020 19:57:57 +0000 (12:57 -0700)]
Merge pull request #9275 from krishnakumarg1984/fix_he_it_typo

replace the use of 'he' with 'it' to refer to neighbouring cell in tria.cc

4 years agoreplace the use of 'he' with 'it' to refer to neighbouring cell in tria.cc 9275/head
Krishnakumar Gopalakrishnan [Thu, 9 Jan 2020 19:51:27 +0000 (19:51 +0000)]
replace the use of 'he' with 'it' to refer to neighbouring cell in tria.cc

4 years agoMerge pull request #9250 from bangerth/3
David Wells [Thu, 9 Jan 2020 18:36:04 +0000 (13:36 -0500)]
Merge pull request #9250 from bangerth/3

Update the discussion of HDF5 and R scripting in step-3.

4 years agoMerge pull request #9270 from krishnakumarg1984/step3_krishna_fix_9227
Wolfgang Bangerth [Thu, 9 Jan 2020 17:24:57 +0000 (10:24 -0700)]
Merge pull request #9270 from krishnakumarg1984/step3_krishna_fix_9227

Step-3 results/extension documentation improvements and fixes. Closes #9227

4 years agoTests: Check for missing Mumps component. 9266/head
Marc Fehling [Wed, 8 Jan 2020 14:55:41 +0000 (15:55 +0100)]
Tests: Check for missing Mumps component.

4 years agoCMake: Check for third party libraries of trilinos.
Marc Fehling [Wed, 8 Jan 2020 16:38:02 +0000 (17:38 +0100)]
CMake: Check for third party libraries of trilinos.

4 years agoReplaces the double-loop in step-3 results extension with just one loop 9270/head
Krishnakumar Gopalakrishnan [Thu, 9 Jan 2020 13:39:40 +0000 (13:39 +0000)]
Replaces the double-loop in step-3 results extension with just one loop

In step-3, replaces make_grid_and_dofs with just make_grid

In Step-3, removes reference to .gnuplot in subsection title in extensions (results)

In step-3, minor wording change to convey that the suggested boundary condition code is only slightly longer than before

trying to address a comment on indentation by reviewer of PR

adding a blank statement after the 'if' line to address reviewer's clarification

removes the extra line added in prev commit. Also, changes indentation of the loop code to 2 spaces

As per the request of a reviewer, reverts the change made to a sub-heading wherein the .gnuplot was removed

4 years agoMerge pull request #9179 from agrayver/add_function_manifold_python
Daniel Arndt [Thu, 9 Jan 2020 14:07:27 +0000 (09:07 -0500)]
Merge pull request #9179 from agrayver/add_function_manifold_python

Add python interface for FunctionManifold

4 years agoMerge pull request #9254 from bangerth/61
Martin Kronbichler [Thu, 9 Jan 2020 10:30:01 +0000 (11:30 +0100)]
Merge pull request #9254 from bangerth/61

Convert step-61 to use face loops with cell->face_iterators().

4 years agoAdd python interface for FunctionManifold 9179/head
Alexander Grayver [Tue, 17 Dec 2019 15:27:37 +0000 (16:27 +0100)]
Add python interface for FunctionManifold

4 years agoMerge pull request #9258 from simonsticko/fe_values_3rd_deriv_updateflag
Daniel Arndt [Thu, 9 Jan 2020 05:32:02 +0000 (00:32 -0500)]
Merge pull request #9258 from simonsticko/fe_values_3rd_deriv_updateflag

shape_3rd_derivative* checks for update_3rd_derivatives

4 years agoMerge pull request #9265 from bangerth/move
Daniel Arndt [Thu, 9 Jan 2020 00:12:44 +0000 (19:12 -0500)]
Merge pull request #9265 from bangerth/move

Move some code.

4 years agoMerge pull request #9267 from bangerth/doc-4
Martin Kronbichler [Wed, 8 Jan 2020 20:10:40 +0000 (21:10 +0100)]
Merge pull request #9267 from bangerth/doc-4

Minor updates to the consensus algorithm class documentation.

4 years agoMinor updates to the consensus algorithm class documentation. 9267/head
Wolfgang Bangerth [Wed, 8 Jan 2020 17:34:55 +0000 (10:34 -0700)]
Minor updates to the consensus algorithm class documentation.

4 years agoMerge pull request #9261 from simonsticko/typos_doc_fe_interface_values
Timo Heister [Wed, 8 Jan 2020 16:48:19 +0000 (11:48 -0500)]
Merge pull request #9261 from simonsticko/typos_doc_fe_interface_values

Fix two typos in documentation of FEInterfaceValues.

4 years agoMove some code. 9265/head
Wolfgang Bangerth [Wed, 8 Jan 2020 16:37:55 +0000 (09:37 -0700)]
Move some code.

The previous code was right but unnecessarily hard to read. A block of code could
only be executed if an 'if' condition was true but wasn't actually under the
condition. Shift things.

4 years agoFix two typos in documentation of FEInterfaceValues. 9261/head
Simon Sticko [Wed, 8 Jan 2020 14:56:45 +0000 (15:56 +0100)]
Fix two typos in documentation of FEInterfaceValues.

4 years agoMerge pull request #9255 from bangerth/doc-3
Wolfgang Bangerth [Wed, 8 Jan 2020 16:16:45 +0000 (09:16 -0700)]
Merge pull request #9255 from bangerth/doc-3

Update documentation of class Partitioner.

4 years agoMerge pull request #9262 from krishnakumarg1984/step5_krishna_fix1
Wolfgang Bangerth [Wed, 8 Jan 2020 16:16:25 +0000 (09:16 -0700)]
Merge pull request #9262 from krishnakumarg1984/step5_krishna_fix1

In Step-5 tutorial, updates name of function being removed (make_grid _and_dofs -> make_grid)

4 years agoMinor edits to the documentation of CommunicationPatternBase. 9255/head
Wolfgang Bangerth [Tue, 7 Jan 2020 22:48:53 +0000 (15:48 -0700)]
Minor edits to the documentation of CommunicationPatternBase.

4 years agoUpdate documentation of class Partitioner.
Wolfgang Bangerth [Tue, 7 Jan 2020 22:43:06 +0000 (15:43 -0700)]
Update documentation of class Partitioner.

4 years agoin step-5, updates another instance of make_grid_and_dofs to make_grid 9262/head
Krishnakumar Gopalakrishnan [Wed, 8 Jan 2020 15:21:03 +0000 (15:21 +0000)]
in step-5, updates another instance of make_grid_and_dofs to make_grid

4 years agoIn Step-5 tutorial, updates name of function being removed (make_grid_and_dofs -...
Krishnakumar Gopalakrishnan [Wed, 8 Jan 2020 15:15:54 +0000 (15:15 +0000)]
In Step-5 tutorial, updates name of function being removed (make_grid_and_dofs -> make_grid)

4 years agoMerge pull request #9257 from bangerth/inst
Daniel Arndt [Wed, 8 Jan 2020 13:38:56 +0000 (08:38 -0500)]
Merge pull request #9257 from bangerth/inst

Simplify dof_tools.inst.in

4 years agoMerge pull request #9253 from bangerth/test
Daniel Arndt [Wed, 8 Jan 2020 13:37:55 +0000 (08:37 -0500)]
Merge pull request #9253 from bangerth/test

Adjust precision with which we output results in hp/crash_17.

4 years agoMerge pull request #9242 from rezarastak/replace_mutex
Daniel Arndt [Wed, 8 Jan 2020 13:33:22 +0000 (08:33 -0500)]
Merge pull request #9242 from rezarastak/replace_mutex

replace some instances of Threads::Mutex with std::mutex

4 years agoMerge pull request #9235 from bangerth/doc
Daniel Arndt [Wed, 8 Jan 2020 13:11:21 +0000 (08:11 -0500)]
Merge pull request #9235 from bangerth/doc

Augment the UMFPACK error message.

4 years agoshape_3rd_derivative* checks for update_3rd_derivatives 9258/head
Simon Sticko [Wed, 8 Jan 2020 12:50:44 +0000 (13:50 +0100)]
shape_3rd_derivative* checks for update_3rd_derivatives

The functions shape_3rd_derivative and shape_3rd_derivative_component
check that update_flags contains update_hessians, but they should check
that update_flags contain update_3rd_derivatives. Fix this.

4 years agoSimplify the instantiations of DoFTools::get/count_dofs_on_patch(). 9257/head
Wolfgang Bangerth [Wed, 8 Jan 2020 04:17:31 +0000 (21:17 -0700)]
Simplify the instantiations of DoFTools::get/count_dofs_on_patch().

4 years agoMerge pull request #9256 from krishnakumarg1984/step4_krishna_fix_3
Daniel Arndt [Wed, 8 Jan 2020 04:01:23 +0000 (23:01 -0500)]
Merge pull request #9256 from krishnakumarg1984/step4_krishna_fix_3

fixes a redundant paragraph in Step-4 tutorial (since vtk format was already introduced in step-3)

4 years agoSimplify the instantiations of DoFTools::extract_dofs().
Wolfgang Bangerth [Wed, 8 Jan 2020 03:42:13 +0000 (20:42 -0700)]
Simplify the instantiations of DoFTools::extract_dofs().

4 years agoSimplify the instantiations of DoFTools::count_dofs_per_block().
Wolfgang Bangerth [Wed, 8 Jan 2020 03:39:43 +0000 (20:39 -0700)]
Simplify the instantiations of DoFTools::count_dofs_per_block().

4 years agoFurther simplify instantiations of DoFTools::count_dofs_per_component().
Wolfgang Bangerth [Wed, 8 Jan 2020 03:28:52 +0000 (20:28 -0700)]
Further simplify instantiations of DoFTools::count_dofs_per_component().

4 years agoSimplify the instantiations of DoFTools::extract_level_dofs().
Wolfgang Bangerth [Wed, 8 Jan 2020 03:24:06 +0000 (20:24 -0700)]
Simplify the instantiations of DoFTools::extract_level_dofs().

4 years agoSimplify the instantiations of DoFTools::count_dofs_per_component().
Wolfgang Bangerth [Wed, 8 Jan 2020 03:10:39 +0000 (20:10 -0700)]
Simplify the instantiations of DoFTools::count_dofs_per_component().

4 years agofixes a redundant paragraph in Step-4 tutorial (since vtk format was already introduc... 9256/head
Krishnakumar Gopalakrishnan [Tue, 7 Jan 2020 23:55:08 +0000 (23:55 +0000)]
fixes a redundant paragraph in Step-4 tutorial (since vtk format was already introduced in step-3)

4 years agoTurn all for loops using "begin_active" into ranged-based ones 9240/head
Daniel Arndt [Mon, 6 Jan 2020 20:55:42 +0000 (21:55 +0100)]
Turn all for loops using "begin_active" into ranged-based ones

4 years agoMerge pull request #9149 from bangerth/18
Daniel Arndt [Tue, 7 Jan 2020 22:15:49 +0000 (17:15 -0500)]
Merge pull request #9149 from bangerth/18

Fix a mistake in the introduction of step-18.

4 years agoMerge pull request #9251 from krishnakumarg1984/step4_krishna_fix_2
Daniel Arndt [Tue, 7 Jan 2020 22:11:45 +0000 (17:11 -0500)]
Merge pull request #9251 from krishnakumarg1984/step4_krishna_fix_2

fixes a typo in step-4 incorrectly quoting the tutorial wherein the ZeroFunction as first introduced

4 years agoConvert step-61 to use face loops with cell->face_iterators(). 9254/head
Wolfgang Bangerth [Tue, 7 Jan 2020 21:40:59 +0000 (14:40 -0700)]
Convert step-61 to use face loops with cell->face_iterators().

This functionality was previously implemented in e2d7a2ff171a111480307d97dce2aa4db063a953
by @masterleinad but had crossed paths with 3f96459cacd673c231357e87c15e95315857e749
(in #8999).

4 years agoMerge pull request #9248 from bangerth/possibilities
Timo Heister [Tue, 7 Jan 2020 21:40:53 +0000 (16:40 -0500)]
Merge pull request #9248 from bangerth/possibilities

Mark 'Possibilities for extensions' as <h3>.

4 years agoAdjust precision with which we output results in hp/crash_17. 9253/head
Wolfgang Bangerth [Tue, 7 Jan 2020 21:24:03 +0000 (14:24 -0700)]
Adjust precision with which we output results in hp/crash_17.

4 years agoMerge pull request #9073 from luca-heltai/particle-generators-dofs
Wolfgang Bangerth [Tue, 7 Jan 2020 21:15:18 +0000 (14:15 -0700)]
Merge pull request #9073 from luca-heltai/particle-generators-dofs

Generate particles on support or quadrature points on other grid

4 years agoadd mailmap entry 9251/head
Timo Heister [Tue, 7 Jan 2020 19:49:33 +0000 (14:49 -0500)]
add mailmap entry

4 years agofixes a typo incorrectly quoting a section wherein the ZeroFunction was first introduced
Krishnakumar Gopalakrishnan [Tue, 7 Jan 2020 17:43:22 +0000 (17:43 +0000)]
fixes a typo incorrectly quoting a section wherein the ZeroFunction was first introduced

4 years agoMerge pull request #9206 from bangerth/tasks
Daniel Arndt [Tue, 7 Jan 2020 17:17:27 +0000 (12:17 -0500)]
Merge pull request #9206 from bangerth/tasks

Provide TaskGroup::size().

4 years agoMerge pull request #9247 from bangerth/fix
David Wells [Tue, 7 Jan 2020 17:09:40 +0000 (12:09 -0500)]
Merge pull request #9247 from bangerth/fix

Fix description of a test.

4 years agoUpdate the discussion of HDF5 and R scripting in step-3. 9250/head
Wolfgang Bangerth [Tue, 7 Jan 2020 16:45:11 +0000 (09:45 -0700)]
Update the discussion of HDF5 and R scripting in step-3.

This is a really nice introduction to what can be done by putting data into
hdf5 files and then postprocessing them in R. I'm really only updating
stylistic issues here.

4 years agoMark 'Possibilities for extensions' as <h3>. 9248/head
Wolfgang Bangerth [Tue, 7 Jan 2020 15:54:46 +0000 (08:54 -0700)]
Mark 'Possibilities for extensions' as <h3>.

Otherwise, our scripts don't pick these headings up and it won't show
in the table of contents.

4 years agoFix description of a test. 9247/head
Wolfgang Bangerth [Tue, 7 Jan 2020 15:48:33 +0000 (08:48 -0700)]
Fix description of a test.

4 years agoMerge pull request #9245 from bangerth/readme
David Wells [Tue, 7 Jan 2020 15:16:05 +0000 (10:16 -0500)]
Merge pull request #9245 from bangerth/readme

Document out of memory issues with 'make -jN'.

4 years agoDocument out of memory issues with 'make -jN'. 9245/head
Wolfgang Bangerth [Tue, 7 Jan 2020 15:07:48 +0000 (08:07 -0700)]
Document out of memory issues with 'make -jN'.

4 years agoMerge pull request #9244 from tjhei/jenkins-osx-increase-timeout
Wolfgang Bangerth [Tue, 7 Jan 2020 15:03:26 +0000 (08:03 -0700)]
Merge pull request #9244 from tjhei/jenkins-osx-increase-timeout

jenkins: increase OSX timeout

4 years agojenkins: increase OSX timeout 9244/head
Timo Heister [Tue, 7 Jan 2020 14:56:43 +0000 (09:56 -0500)]
jenkins: increase OSX timeout

It turns out that builds take longer after updating the machine to a
newer xcode and we regularly encounter a timeout.

4 years agoAugment the UMFPACK error message. 9235/head
Wolfgang Bangerth [Mon, 6 Jan 2020 19:48:49 +0000 (12:48 -0700)]
Augment the UMFPACK error message.

4 years agoGenerate particles on support or quadrature points on other grid 9073/head
Luca Heltai [Thu, 21 Nov 2019 18:57:16 +0000 (19:57 +0100)]
Generate particles on support or quadrature points on other grid

Functions that generates particles at the location of the support points of a
possibly non-matching grid or at the quadrature points of a possibly non-matching grid

The total number of particles that is added to the particle_handler
object is the number of dofs of the DoFHandler that is passed that are
within the triangulation and whose components are within the
ComponentMask.

Co-authored-by: Bruno Blais <blais.bruno@gmail.com>
Co-authored-by: Luca Heltai <luca.heltai@sissa.it>
4 years agoMerge pull request #9238 from bangerth/ia64
Martin Kronbichler [Tue, 7 Jan 2020 07:30:42 +0000 (08:30 +0100)]
Merge pull request #9238 from bangerth/ia64

Remove reference to the IA64 architecture.

4 years agoMerge pull request #9239 from tjhei/config_h_p4est_old
Martin Kronbichler [Tue, 7 Jan 2020 07:29:28 +0000 (08:29 +0100)]
Merge pull request #9239 from tjhei/config_h_p4est_old

config.h: remove old p4est version logic

4 years agoMerge pull request #9241 from bangerth/doftools
Martin Kronbichler [Tue, 7 Jan 2020 07:20:53 +0000 (08:20 +0100)]
Merge pull request #9241 from bangerth/doftools

Mark some input arguments as 'const'.

4 years agoreplace some instances of Threads::Mutex with std::mutex 9242/head
Reza Rastak [Tue, 7 Jan 2020 05:35:37 +0000 (21:35 -0800)]
replace some instances of Threads::Mutex with std::mutex

4 years agoAdd a changelog entry. 9149/head
Wolfgang Bangerth [Fri, 6 Dec 2019 23:17:50 +0000 (16:17 -0700)]
Add a changelog entry.


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