]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
4 years agoMerge pull request #10245 from tjhei/update-copyright-act-3
Wolfgang Bangerth [Sat, 16 May 2020 03:09:08 +0000 (05:09 +0200)]
Merge pull request #10245 from tjhei/update-copyright-act-3

update copyright years

4 years agoMerge pull request #10241 from tjhei/copyright-script-go-deeper
Wolfgang Bangerth [Sat, 16 May 2020 03:07:35 +0000 (05:07 +0200)]
Merge pull request #10241 from tjhei/copyright-script-go-deeper

fix update-copyright not going 2 levels deep into src/include

4 years agoupdate copyright years 10245/head
Timo Heister [Fri, 15 May 2020 22:54:34 +0000 (18:54 -0400)]
update copyright years

with fixed script from #10241 and after a lot of other changes came in.

4 years agoMerge pull request #10242 from marcfehling/fix-copyright
Timo Heister [Sat, 16 May 2020 01:15:21 +0000 (21:15 -0400)]
Merge pull request #10242 from marcfehling/fix-copyright

Fixed a few copyright years manually.

4 years agoextend update-copyright script (missing files) 10241/head
Timo Heister [Fri, 15 May 2020 22:46:50 +0000 (18:46 -0400)]
extend update-copyright script (missing files)

- fix not going 2 levels deep into src/include, reported in #10240
- add .cu files

4 years agoFixed even more copyright years manually. 10242/head
Marc Fehling [Fri, 15 May 2020 22:55:49 +0000 (00:55 +0200)]
Fixed even more copyright years manually.

4 years agoFixed a few copyright years manually.
Marc Fehling [Fri, 15 May 2020 22:42:25 +0000 (00:42 +0200)]
Fixed a few copyright years manually.

4 years agoMerge pull request #10236 from drwells/step-70-make-unique
Daniel Arndt [Fri, 15 May 2020 21:23:05 +0000 (17:23 -0400)]
Merge pull request #10236 from drwells/step-70-make-unique

4 years agoMerge pull request #10230 from tamiko/adjust_test_output_2
Martin Kronbichler [Fri, 15 May 2020 19:38:50 +0000 (21:38 +0200)]
Merge pull request #10230 from tamiko/adjust_test_output_2

Test boost/extract_rep*_02: adjust test output for libc++

4 years agoMerge pull request #10237 from drwells/step-70-spelling
Wolfgang Bangerth [Fri, 15 May 2020 19:28:35 +0000 (21:28 +0200)]
Merge pull request #10237 from drwells/step-70-spelling

Improve spelling in step-70.

4 years agoImprove spelling in step-70. 10237/head
David Wells [Fri, 15 May 2020 17:47:50 +0000 (13:47 -0400)]
Improve spelling in step-70.

4 years agoUse std_cxx14::make_unique in step-70. 10236/head
David Wells [Fri, 15 May 2020 17:38:40 +0000 (13:38 -0400)]
Use std_cxx14::make_unique in step-70.

4 years agoMerge pull request #10232 from luca-heltai/fix-doi-step-70
Wolfgang Bangerth [Fri, 15 May 2020 15:54:32 +0000 (17:54 +0200)]
Merge pull request #10232 from luca-heltai/fix-doi-step-70

Updated doi.

4 years agoUpdated doi. 10232/head
Luca Heltai [Fri, 15 May 2020 15:19:21 +0000 (17:19 +0200)]
Updated doi.

4 years agoTest boost/extract_rep*_02: adjust test output for libc++ 10230/head
Matthias Maier [Fri, 15 May 2020 14:59:39 +0000 (09:59 -0500)]
Test boost/extract_rep*_02: adjust test output for libc++

We have to adjust the output after
bfe81e2b89a39792ee48dd7d028e8860cc44551e also for the libc++ variant.

See 9038e6000b681910227e24302e964835a344ddf8

For reference, the difference between libstdc++ and libc++ output is as
follows:
```
--- extract_representative_set_02.with_p4est=true.mpirun=3.output       2020-05-15 09:27:53.256578723 -0500
+++ extract_representative_set_02.with_p4est=true.mpirun=3.output.libstdc++     2020-05-15 09:58:47.149994734 -0500
@@ -137,16 +137,16 @@
 0.5 -0.707107

 DEAL:1::-0.0732233 -0.0732233
-0.21967 -0.0732233
-0.21967 0.292893
+0.292893 -0.0732233
+0.292893 0.292893
 -0.0732233 0.292893
 -0.0732233 -0.0732233

-DEAL:1::0.21967 -1.11022e-16
-1 -1.11022e-16
+DEAL:1::0.21967 -0.0732233
+1 -0.0732233
 1 0.382683
 0.21967 0.382683
-0.21967 -1.11022e-16
+0.21967 -0.0732233
```

4 years agoMerge pull request #10227 from kronbichler/warning_step-70
Matthias Maier [Fri, 15 May 2020 14:29:38 +0000 (09:29 -0500)]
Merge pull request #10227 from kronbichler/warning_step-70

Fix warning in step-70

4 years agoFix warning in step-70 10227/head
Martin Kronbichler [Fri, 15 May 2020 10:32:16 +0000 (12:32 +0200)]
Fix warning in step-70

4 years agoMerge pull request #10225 from kronbichler/adjust_test_output
Matthias Maier [Fri, 15 May 2020 06:23:11 +0000 (01:23 -0500)]
Merge pull request #10225 from kronbichler/adjust_test_output

Fix test output forgotten in #9969

4 years agoFix test output forgotten in #9969 10225/head
Martin Kronbichler [Fri, 15 May 2020 06:12:34 +0000 (08:12 +0200)]
Fix test output forgotten in #9969

4 years agoMerge pull request #9078 from luca-heltai/step-70
Martin Kronbichler [Fri, 15 May 2020 05:58:33 +0000 (07:58 +0200)]
Merge pull request #9078 from luca-heltai/step-70

Step 70

4 years agoMerge pull request #10174 from luca-heltai/fix-find-cell-around-point
Martin Kronbichler [Fri, 15 May 2020 05:57:32 +0000 (07:57 +0200)]
Merge pull request #10174 from luca-heltai/fix-find-cell-around-point

Fix find active cell around point.

4 years agoMerge pull request #10220 from tjhei/test_parameter_handler_additional_file
Matthias Maier [Fri, 15 May 2020 05:57:19 +0000 (00:57 -0500)]
Merge pull request #10220 from tjhei/test_parameter_handler_additional_file

tests: add additional output file for intel

4 years agoMerge pull request #9969 from marcfehling/binary-search
Martin Kronbichler [Fri, 15 May 2020 05:53:46 +0000 (07:53 +0200)]
Merge pull request #9969 from marcfehling/binary-search

Revisited binary search for parallel::distributed::GridRefinement.

4 years agoMerge pull request #10215 from marcfehling/fix_10211
Martin Kronbichler [Fri, 15 May 2020 05:00:03 +0000 (07:00 +0200)]
Merge pull request #10215 from marcfehling/fix_10211

Bugfix: Cells may not receive any variable size data.

4 years agotests: add additional output file for intel 10220/head
Timo Heister [Fri, 15 May 2020 02:03:25 +0000 (22:03 -0400)]
tests: add additional output file for intel

4 years agoMerge pull request #10198 from bangerth/50
Matthias Maier [Fri, 15 May 2020 00:16:11 +0000 (19:16 -0500)]
Merge pull request #10198 from bangerth/50

Updates to step-50

4 years agoBugfix: Cells may not receive any variable size data. 10215/head
Marc Fehling [Thu, 14 May 2020 22:25:31 +0000 (00:25 +0200)]
Bugfix: Cells may not receive any variable size data.

4 years agoReview by Marc. 9078/head
Luca Heltai [Thu, 14 May 2020 23:45:24 +0000 (01:45 +0200)]
Review by Marc.

4 years agoFixed parameters_23.prm
Luca Heltai [Thu, 14 May 2020 23:12:47 +0000 (01:12 +0200)]
Fixed parameters_23.prm

4 years agoFixed indent.
Luca Heltai [Thu, 14 May 2020 22:28:21 +0000 (00:28 +0200)]
Fixed indent.

4 years agoSome minor changes. Add support for output directory.
Luca Heltai [Tue, 12 May 2020 22:31:42 +0000 (00:31 +0200)]
Some minor changes. Add support for output directory.

4 years ago- Changed the default values for the parameters for the 2D case. The default case...
blaisb [Tue, 12 May 2020 02:55:50 +0000 (22:55 -0400)]
- Changed the default values for the parameters for the 2D case. The default case should run easily and produce better results
- Finalized resulted for the 2D case
- Minor modifications to introduction

4 years ago- Fixed indentation
blaisb [Mon, 11 May 2020 15:58:59 +0000 (11:58 -0400)]
- Fixed indentation
- Corrected small typos /sentences in introduction
- Removed the automatic deletion of .vtk files for step-70

4 years agoFirst draft of results
Luca Heltai [Mon, 11 May 2020 10:55:42 +0000 (12:55 +0200)]
First draft of results

4 years agoFixed indent.
Luca Heltai [Mon, 11 May 2020 00:30:42 +0000 (02:30 +0200)]
Fixed indent.

4 years agoWorking 3d.
Luca Heltai [Sun, 10 May 2020 23:54:35 +0000 (01:54 +0200)]
Working 3d.

4 years agoSwitched to FGMRES.
Luca Heltai [Sun, 10 May 2020 12:04:08 +0000 (14:04 +0200)]
Switched to FGMRES.

4 years agoFixed small issues.
Luca Heltai [Sun, 10 May 2020 10:48:46 +0000 (12:48 +0200)]
Fixed small issues.

4 years agoFix more typos and add a paragraph about particles
Rene Gassmoeller [Sun, 10 May 2020 00:02:17 +0000 (17:02 -0700)]
Fix more typos and add a paragraph about particles

4 years agoFix some typos
Rene Gassmoeller [Sat, 9 May 2020 23:14:21 +0000 (16:14 -0700)]
Fix some typos

4 years agoAddresses all of the corrections and comments of @peterrum
blaisb [Thu, 7 May 2020 02:16:00 +0000 (22:16 -0400)]
Addresses all of the corrections and comments of @peterrum
Introduction and documentation can still be improved.

4 years agoFixed codimension one build.
Luca Heltai [Sat, 2 May 2020 21:31:06 +0000 (23:31 +0200)]
Fixed codimension one build.

4 years agoShort fix to documentation
blaisb [Sat, 2 May 2020 06:07:31 +0000 (02:07 -0400)]
Short fix to documentation

4 years ago- Corrected typos and mistakes
blaisb [Sat, 2 May 2020 05:58:26 +0000 (01:58 -0400)]
- Corrected typos and mistakes
- Finished first pass at documenting step-70
- Changed the default parameter of nitsche penalization to ensure convergence of iterative solver in parallel
- Changed the function driving the motion of the impeller to ensure it comes back at it's original place in then end

4 years agoSome more docs.
Luca Heltai [Fri, 1 May 2020 23:03:03 +0000 (01:03 +0200)]
Some more docs.

4 years agoAllow filenames and cad files.
Luca Heltai [Fri, 1 May 2020 14:58:48 +0000 (16:58 +0200)]
Allow filenames and cad files.

4 years agoTrailing space.
Luca Heltai [Fri, 1 May 2020 13:12:33 +0000 (15:12 +0200)]
Trailing space.

4 years agoMore docs.
Luca Heltai [Fri, 1 May 2020 10:47:20 +0000 (12:47 +0200)]
More docs.

4 years agoFixed typos and small formulas error in the introduction
blaisb [Fri, 1 May 2020 03:05:55 +0000 (23:05 -0400)]
Fixed typos and small formulas error in the introduction

4 years agoRevised and corrected intro.dox
Luca Heltai [Thu, 30 Apr 2020 21:48:33 +0000 (23:48 +0200)]
Revised and corrected intro.dox

4 years agoAdded description of step-70 in top level directory.
Luca Heltai [Thu, 30 Apr 2020 19:33:11 +0000 (21:33 +0200)]
Added description of step-70 in top level directory.

4 years agoAdd implementation of Nitsche for co-dim one
Luca Heltai [Thu, 30 Apr 2020 18:03:55 +0000 (20:03 +0200)]
Add implementation of Nitsche for co-dim one

4 years ago- Fixed a lot of mistakes in equations that prevented rendering
blaisb [Thu, 30 Apr 2020 17:11:06 +0000 (13:11 -0400)]
- Fixed a lot of mistakes in equations that prevented rendering
- Fixed a few spelling mistakes
- Fixed formulation of the weak form for the Nitsche method

4 years agoIndentation fix
blaisb [Thu, 30 Apr 2020 13:05:30 +0000 (09:05 -0400)]
Indentation fix

4 years agoTry to fix doxygen.
Luca Heltai [Thu, 30 Apr 2020 12:09:08 +0000 (14:09 +0200)]
Try to fix doxygen.

4 years agoFinished a first complete draft of the introduction
blaisb [Thu, 30 Apr 2020 04:40:15 +0000 (00:40 -0400)]
Finished a first complete draft of the introduction

4 years agoSome documentation.
Luca Heltai [Tue, 28 Apr 2020 21:36:19 +0000 (23:36 +0200)]
Some documentation.

4 years agoProgress on documentation
blaisb [Mon, 20 Apr 2020 02:19:35 +0000 (22:19 -0400)]
Progress on documentation

4 years agoBegun work on the introduction of the documentation of step-70
blaisb [Sat, 18 Apr 2020 05:39:27 +0000 (01:39 -0400)]
Begun work on the introduction of the documentation of step-70

4 years agoLocal refinement, and output to single vtu + global pvd.
Luca Heltai [Fri, 17 Apr 2020 00:41:45 +0000 (02:41 +0200)]
Local refinement, and output to single vtu + global pvd.

4 years agoCopy doc from step-60.
Luca Heltai [Tue, 14 Apr 2020 23:09:21 +0000 (01:09 +0200)]
Copy doc from step-60.

4 years agoAdded example parameter file.
Luca Heltai [Tue, 14 Apr 2020 23:00:20 +0000 (01:00 +0200)]
Added example parameter file.

4 years agoStep-70
Luca Heltai [Thu, 21 Nov 2019 19:28:22 +0000 (20:28 +0100)]
Step-70

Work in progress for step-70.

Co-authored-by: Bruno Blais <blais.bruno@gmail.com>
4 years agoDirty fix. 10174/head
Luca Heltai [Thu, 14 May 2020 20:57:21 +0000 (22:57 +0200)]
Dirty fix.

4 years agoFailing test on find active cell around point.
Luca Heltai [Wed, 13 May 2020 00:59:32 +0000 (02:59 +0200)]
Failing test on find active cell around point.

4 years agoAdded tests with different compositions of criteria vectors for fixed number refinement. 9969/head
Marc Fehling [Thu, 14 May 2020 18:44:41 +0000 (20:44 +0200)]
Added tests with different compositions of criteria vectors for fixed number refinement.

4 years agoRevisited adjust_interesting_range for parallel::distributed::GridRefinement.
Marc Fehling [Tue, 28 Apr 2020 13:41:32 +0000 (15:41 +0200)]
Revisited adjust_interesting_range for parallel::distributed::GridRefinement.

4 years agoMake further edits to step-50.cc. 10198/head
Wolfgang Bangerth [Thu, 14 May 2020 16:22:09 +0000 (10:22 -0600)]
Make further edits to step-50.cc.

4 years agoAvoid a statement that appears to confuse doxygen.
Wolfgang Bangerth [Wed, 13 May 2020 22:52:45 +0000 (16:52 -0600)]
Avoid a statement that appears to confuse doxygen.

4 years agoPrint an error message if no input is given.
Wolfgang Bangerth [Wed, 13 May 2020 22:03:22 +0000 (16:03 -0600)]
Print an error message if no input is given.

4 years agoRename variables to their standard names.
Wolfgang Bangerth [Wed, 13 May 2020 21:41:24 +0000 (15:41 -0600)]
Rename variables to their standard names.

4 years agoUse the name make_coefficient_table() in analogy to make_shared() etc.
Wolfgang Bangerth [Wed, 13 May 2020 21:39:48 +0000 (15:39 -0600)]
Use the name make_coefficient_table() in analogy to make_shared() etc.

4 years agoUse switch statements for finite enumerations.
Wolfgang Bangerth [Wed, 13 May 2020 21:39:04 +0000 (15:39 -0600)]
Use switch statements for finite enumerations.

4 years agoMinor code improvements to step-50.
Wolfgang Bangerth [Wed, 13 May 2020 21:36:34 +0000 (15:36 -0600)]
Minor code improvements to step-50.

4 years agoUse better variable names when computing the error estimator.
Wolfgang Bangerth [Wed, 13 May 2020 21:34:30 +0000 (15:34 -0600)]
Use better variable names when computing the error estimator.

4 years agoSimplify creation of a std::set.
Wolfgang Bangerth [Wed, 13 May 2020 21:32:27 +0000 (15:32 -0600)]
Simplify creation of a std::set.

4 years agoBreak a long string to lead to a better line break.
Wolfgang Bangerth [Wed, 13 May 2020 21:30:02 +0000 (15:30 -0600)]
Break a long string to lead to a better line break.

4 years agoRename a variable in step-50.
Wolfgang Bangerth [Wed, 13 May 2020 21:26:53 +0000 (15:26 -0600)]
Rename a variable in step-50.

4 years agoUse a better description of the error estimator vector in the output.
Wolfgang Bangerth [Wed, 13 May 2020 21:24:16 +0000 (15:24 -0600)]
Use a better description of the error estimator vector in the output.

4 years agoMake the logic in step-50's main() function simpler.
Wolfgang Bangerth [Wed, 13 May 2020 21:23:00 +0000 (15:23 -0600)]
Make the logic in step-50's main() function simpler.

4 years agoUpdate the commentary of step-50.
Wolfgang Bangerth [Wed, 13 May 2020 21:22:34 +0000 (15:22 -0600)]
Update the commentary of step-50.

4 years agoUpdates to the results section of step-50.
Wolfgang Bangerth [Wed, 13 May 2020 21:18:12 +0000 (15:18 -0600)]
Updates to the results section of step-50.

4 years agoUpdates to the introduction of step-50.
Wolfgang Bangerth [Wed, 13 May 2020 21:18:02 +0000 (15:18 -0600)]
Updates to the introduction of step-50.

4 years agoMerge pull request #10182 from nfehn/feevaluation
Martin Kronbichler [Thu, 14 May 2020 19:46:23 +0000 (21:46 +0200)]
Merge pull request #10182 from nfehn/feevaluation

clarify documentation of FEEvaluation::set_dof_values()

4 years agoMerge pull request #10208 from agrayver/fix_python_manifold
Martin Kronbichler [Thu, 14 May 2020 19:45:31 +0000 (21:45 +0200)]
Merge pull request #10208 from agrayver/fix_python_manifold

Fix python FunctionManifold

4 years agoMerge pull request #10013 from marcfehling/pd-error-prediction-extension
Wolfgang Bangerth [Thu, 14 May 2020 15:44:29 +0000 (17:44 +0200)]
Merge pull request #10013 from marcfehling/pd-error-prediction-extension

Introduced p::d::ErrorPredictor.

4 years agoclarify documentation of FEEvaluation::set_dof_values() 10182/head
Niklas Fehn [Wed, 13 May 2020 11:56:39 +0000 (13:56 +0200)]
clarify documentation of FEEvaluation::set_dof_values()

4 years agoIntroduced p::d::ErrorPredictor. 10013/head
Marc Fehling [Fri, 22 Nov 2019 17:06:14 +0000 (18:06 +0100)]
Introduced p::d::ErrorPredictor.

Predicts error after adaptation based on future_fe_indices and CellStatus.

4 years agoMerge pull request #10194 from drwells/remove-cout-from-test
Timo Heister [Thu, 14 May 2020 11:56:53 +0000 (07:56 -0400)]
Merge pull request #10194 from drwells/remove-cout-from-test

Avoid using std::cout in a test.

4 years agoMerge pull request #10201 from tamiko/fix_parpack_search
Timo Heister [Thu, 14 May 2020 11:55:52 +0000 (07:55 -0400)]
Merge pull request #10201 from tamiko/fix_parpack_search

CMake: relax arpack and parpack library directory requirements

4 years agoMerge pull request #10207 from peterrum/extract_rtree_level_small_fix
Timo Heister [Thu, 14 May 2020 11:55:29 +0000 (07:55 -0400)]
Merge pull request #10207 from peterrum/extract_rtree_level_small_fix

Fix extract_rtree_level for small problem sizes

4 years agoFix python FunctionManifold 10208/head
Alexander Grayver [Thu, 14 May 2020 09:25:39 +0000 (11:25 +0200)]
Fix python FunctionManifold

4 years agoFix extract_rtree_level for small problem sizes 10207/head
Peter Munch [Thu, 14 May 2020 08:32:50 +0000 (10:32 +0200)]
Fix extract_rtree_level for small problem sizes

4 years agoMerge pull request #10199 from masterleinad/fix_mpi_condense_petsc_complex
Timo Heister [Thu, 14 May 2020 00:29:22 +0000 (20:29 -0400)]
Merge pull request #10199 from masterleinad/fix_mpi_condense_petsc_complex

Choose output files for mpi/condense_01 correctly

4 years agoMerge pull request #10202 from bangerth/changelog
Matthias Maier [Wed, 13 May 2020 23:21:29 +0000 (18:21 -0500)]
Merge pull request #10202 from bangerth/changelog

Update an entry in the changelog.

4 years agoUpdate an entry in the changelog. 10202/head
Wolfgang Bangerth [Wed, 13 May 2020 23:05:53 +0000 (17:05 -0600)]
Update an entry in the changelog.

4 years agoCMake: relax arpack and parpack library directory requirements 10201/head
Matthias Maier [Wed, 13 May 2020 22:54:10 +0000 (17:54 -0500)]
CMake: relax arpack and parpack library directory requirements

Some Linux distributions install the parallel libparpack.so* component
in an MPI vendor specific directory different from the location of the
serial libarpack.so* library. We can thus not assume that both are
located in the same directory.

Closes: #10197
4 years agoMerge pull request #10195 from tamiko/fix_doxygen_include_strip
Matthias Maier [Wed, 13 May 2020 22:49:29 +0000 (17:49 -0500)]
Merge pull request #10195 from tamiko/fix_doxygen_include_strip

Doxygen: Fix include strip

4 years agoChoose output files for mpi/condense_01 correctly 10199/head
Daniel Arndt [Wed, 13 May 2020 22:09:46 +0000 (18:09 -0400)]
Choose output files for mpi/condense_01 correctly

4 years agoDoxygen: Fix include strip 10195/head
Matthias Maier [Wed, 13 May 2020 19:19:18 +0000 (14:19 -0500)]
Doxygen: Fix include strip

This fixes a bug introduced in #10187


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