]>
https://gitweb.dealii.org/ - dealii.git/log
Wolfgang Bangerth [Mon, 19 Oct 2020 23:19:08 +0000 (17:19 -0600)]
Update documentation in FEFieldFunction.
Daniel Arndt [Mon, 19 Oct 2020 14:17:29 +0000 (10:17 -0400)]
Merge pull request #11049 from tjhei/improve_make_hanging_error_message
improve error message in make_hanging_node_constraints()
Martin Kronbichler [Sat, 17 Oct 2020 18:37:41 +0000 (20:37 +0200)]
Merge pull request #11047 from peterrum/mf_only_use_partitioners
MatrixFree: only use partitioner for communication for L:p:V
Martin Kronbichler [Sat, 17 Oct 2020 18:01:40 +0000 (20:01 +0200)]
Merge pull request #11045 from kronbichler/vectorize_transform_points_real_to_unit
Vectorize MappingQGeneric::transform_points_real_to_unit_cell
Martin Kronbichler [Sat, 17 Oct 2020 17:56:59 +0000 (19:56 +0200)]
Merge pull request #11051 from peterrum/ghost_indices_subset_data
Fix Partitioner::ghost_indices_subset_data for larger_ghost_index_set.size() == 0
Martin Kronbichler [Sat, 17 Oct 2020 17:21:28 +0000 (19:21 +0200)]
Merge pull request #11029 from peterrum/simplex_vtu
Generalize DataOut::write_vtu for simplex mesh
Peter Munch [Fri, 16 Oct 2020 20:53:00 +0000 (22:53 +0200)]
Fix Partitioner::ghost_indices_subset_data for larger_ghost_index_set.size() == 0
Timo Heister [Fri, 16 Oct 2020 20:23:35 +0000 (16:23 -0400)]
Merge pull request #11048 from peterrum/gc_remove_include
Remove unnecessary include
Timo Heister [Fri, 16 Oct 2020 18:17:56 +0000 (14:17 -0400)]
improve error message in make_hanging_node_constraints()
Without this, it fails with an internal error deep inside the
constraints computation.
Peter Munch [Sun, 11 Oct 2020 11:51:05 +0000 (13:51 +0200)]
Generalize DataOut::write_vtu for simplex mesh
Peter Munch [Fri, 16 Oct 2020 17:18:41 +0000 (19:18 +0200)]
Remove unnecessary include
Peter Munch [Fri, 16 Oct 2020 16:59:22 +0000 (18:59 +0200)]
MatrixFree: only use partitioner for communication for L:p:V
Martin Kronbichler [Fri, 16 Oct 2020 10:24:19 +0000 (12:24 +0200)]
Add test case
Martin Kronbichler [Thu, 15 Oct 2020 09:09:49 +0000 (11:09 +0200)]
Vectorize MappingQGeneric::transform_points_real_to_unit_cell
Peter Munch [Thu, 15 Oct 2020 19:41:13 +0000 (21:41 +0200)]
Merge pull request #11034 from kronbichler/evaluate_tensor_product_value_and_gradient
Generic evaluation of tensor product interpolation and gradient in a point
David Wells [Thu, 15 Oct 2020 17:57:57 +0000 (13:57 -0400)]
Merge pull request #11033 from bangerth/supg
Explain SUPG in step-9.
Bruno Turcksin [Thu, 15 Oct 2020 12:38:12 +0000 (08:38 -0400)]
Merge pull request #11044 from peterrum/mf_hf_getter
Add MatrixFree::get_active_fe_index and ::get_active_quadrature_index
Martin Kronbichler [Sun, 11 Oct 2020 20:36:19 +0000 (22:36 +0200)]
Test cases
Martin Kronbichler [Sun, 11 Oct 2020 20:36:06 +0000 (22:36 +0200)]
Simplify mapping implementation with new function
Martin Kronbichler [Sun, 11 Oct 2020 20:35:49 +0000 (22:35 +0200)]
Implement generic tensor production evaluation in a point
Martin Kronbichler [Sun, 11 Oct 2020 20:35:22 +0000 (22:35 +0200)]
Make a polynomial function inline to allow templated use
Peter Munch [Thu, 15 Oct 2020 04:45:14 +0000 (06:45 +0200)]
Add MatrixFree::get_active_fe_index and ::get_active_quadrature_index
Peter Munch [Wed, 14 Oct 2020 10:27:53 +0000 (12:27 +0200)]
Merge pull request #11043 from dangars/typo_parallel_documentation
Fix typo
Martin Kronbichler [Wed, 14 Oct 2020 10:23:49 +0000 (12:23 +0200)]
Merge pull request #11040 from peterrum/matrixfree_hp_sizes
Fix MF setup for hp::FECollection::size() neq hp::QCollection::size()
Daniel Garcia-Sanchez [Wed, 14 Oct 2020 09:33:46 +0000 (11:33 +0200)]
Fix typo
Wolfgang Bangerth [Wed, 14 Oct 2020 01:58:15 +0000 (19:58 -0600)]
Merge pull request #11041 from krishnakumarg1984/he_it_replace
replaces the remaining occurences of 'he' with 'it'
Wolfgang Bangerth [Wed, 14 Oct 2020 01:22:04 +0000 (19:22 -0600)]
Merge pull request #11042 from krishnakumarg1984/fix_bib
adds the bib entry for Cangiani et al. Uses it in the inline citation…
Krishnakumar Gopalakrishnan [Tue, 13 Oct 2020 23:07:26 +0000 (00:07 +0100)]
adds the bib entry for Cangiani et al. Uses it in the inline citation for FE_NOTHING class documentation
Krishnakumar Gopalakrishnan [Tue, 13 Oct 2020 22:37:57 +0000 (23:37 +0100)]
replaces the remaining occurences of 'he' with 'it'
Martin Kronbichler [Tue, 13 Oct 2020 07:08:36 +0000 (09:08 +0200)]
Merge pull request #11037 from kronbichler/fix_fe_eval_docu
Improve documentation of FEEvaluationBaseData::inverse_jacobian
Peter Munch [Tue, 13 Oct 2020 06:59:26 +0000 (08:59 +0200)]
Fix MatrixFree setup for hp::FECollection::size() neq hp::QCollection::size()
Wolfgang Bangerth [Sun, 11 Oct 2020 20:41:38 +0000 (14:41 -0600)]
Add a changelog entry.
Wolfgang Bangerth [Sun, 11 Oct 2020 20:37:48 +0000 (14:37 -0600)]
Explain SUPG in step-9.
Timo Heister [Mon, 12 Oct 2020 18:25:20 +0000 (14:25 -0400)]
Merge pull request #11031 from tjhei/gcc_segfault
work around gcc segfault in tensor.h
Daniel Arndt [Mon, 12 Oct 2020 14:03:14 +0000 (10:03 -0400)]
Merge pull request #11036 from kronbichler/remove_assertion
Matrix-free evaluation kernels: adjust check in assertion
Timo Heister [Mon, 12 Oct 2020 13:14:55 +0000 (09:14 -0400)]
move out-of class
Martin Kronbichler [Mon, 12 Oct 2020 08:11:13 +0000 (10:11 +0200)]
Improve documentation of FEEvaluationBaseData::inverse_jacobian
Martin Kronbichler [Mon, 12 Oct 2020 07:55:29 +0000 (09:55 +0200)]
Fix check in assertion
Timo Heister [Sun, 11 Oct 2020 18:14:53 +0000 (14:14 -0400)]
work around gcc segfault in tensor.h
gcc 5.4.0 with -O1 in debug mode segfaults with
```
In file included from ../include/deal.II/base/symmetric_tensor.h:25:0,
from ../include/deal.II/base/array_view.h:23,
from ../source/fe/fe_values.cc:16,
from ../source/fe/fe_values_inst4.cc:17:
../include/deal.II/base/tensor.h: In function ‘void
dealii::FEValuesViews::internal::do_function_symmetric_gradients(const
dealii::ArrayView<Number>&, const dealii::Table<2, dealii::Tensor<1,
spacedim> >&, const std::vector<typename
dealii::FEValuesViews::Vector<dim, spacedim>::ShapeFunctionData>&,
std::vector<typename dealii::ProductType<Number,
dealii::SymmetricTensor<2, spacedim> >::type>&) [with int dim = 1; int
spacedim = 1; Number = std::complex<double>; typename
dealii::FEValuesViews::Vector<dim, spacedim>::ShapeFunctionData =
dealii::FEValuesViews::Vector<1, 1>::ShapeFunctionData; typename
dealii::ProductType<Number, dealii::SymmetricTensor<2, spacedim> >::type
= dealii::SymmetricTensor<2, 1, std::complex<double> >]’:
../include/deal.II/base/tensor.h:497:35: in constexpr expansion of
‘(long unsigned int)(__first + 16u)()’
../include/deal.II/base/tensor.h:497:35: in constexpr expansion of
‘<expression error>()’
../include/deal.II/base/tensor.h:497:35: in constexpr expansion of
‘dealii::Tensor<2, 1, double>()’
../include/deal.II/base/tensor.h:497:35: in constexpr expansion of
‘(void*)__first()’
In file included from ../source/fe/fe_values_inst4.cc:17:0:
../source/fe/fe_values.cc:700:5: internal compiler error: Segmentation
fault
do_function_symmetric_gradients(
```
Work around this by changing the constructor.
Peter Munch [Sun, 11 Oct 2020 14:15:34 +0000 (16:15 +0200)]
Merge pull request #11025 from Arpit-Babbar/suggested_edits_arpit
Step-3, Step-7
Arpit Babbar [Fri, 9 Oct 2020 05:18:02 +0000 (10:48 +0530)]
Explained that template argument for SolverCG has been specified, even though it is the same as default argument(Step - 3), removed destructor and added const where the documentation indicated it(Step-7)
Timo Heister [Sat, 10 Oct 2020 14:47:31 +0000 (10:47 -0400)]
Merge pull request #11022 from masterleinad/debug_indednt
Make indent CI check abort on Doxygen warnings
Wolfgang Bangerth [Fri, 9 Oct 2020 02:39:42 +0000 (20:39 -0600)]
Merge pull request #11024 from drwells/add-boost-version-check
Add a quick check for matching boost versions.
Daniel Arndt [Fri, 9 Oct 2020 02:18:29 +0000 (22:18 -0400)]
Work around depreactions in QProjector
David Wells [Fri, 9 Oct 2020 00:58:44 +0000 (20:58 -0400)]
Add a quick check for matching boost versions.
This addresses a problem a user had recently with inscrutable crashes caused by
mixed boost versions. Credit goes to Daniel Jodlbauer for reporting the issue.
Daniel Arndt [Thu, 8 Oct 2020 21:58:29 +0000 (17:58 -0400)]
One more
Daniel Arndt [Thu, 8 Oct 2020 21:43:12 +0000 (17:43 -0400)]
Fix some more
Daniel Arndt [Thu, 8 Oct 2020 18:23:08 +0000 (14:23 -0400)]
Fix doxygen warnings
Daniel Arndt [Thu, 8 Oct 2020 18:13:42 +0000 (14:13 -0400)]
Make indent CI check abort on Doxygen warnings
Peter Munch [Thu, 8 Oct 2020 18:03:15 +0000 (20:03 +0200)]
Merge pull request #11021 from kronbichler/array_view_const
Make ArrayView argument const
Martin Kronbichler [Thu, 8 Oct 2020 16:41:32 +0000 (18:41 +0200)]
Make ArrayView argument const
Daniel Arndt [Thu, 8 Oct 2020 14:37:30 +0000 (10:37 -0400)]
Merge pull request #11020 from tjhei/dox_generate_deprecated
doxygen: generate deprecated list
David Wells [Thu, 8 Oct 2020 14:16:37 +0000 (10:16 -0400)]
Merge pull request #11018 from peterrum/gmg_type_fix
Fix type of FineDoFHandlerView (again)
Timo Heister [Thu, 8 Oct 2020 14:07:37 +0000 (10:07 -0400)]
doxygen: generate deprecated list
otherwise @deprecated paragraphs are being ignored.
Fixes #11017
Peter Munch [Thu, 8 Oct 2020 10:51:39 +0000 (12:51 +0200)]
Fix type of FineDoFHandlerView (again)
Peter Munch [Thu, 8 Oct 2020 05:18:37 +0000 (07:18 +0200)]
Merge pull request #10991 from kronbichler/mapping_transform_many_points
Let mapping transform multiple points from real to unit cell
Wolfgang Bangerth [Thu, 8 Oct 2020 01:35:25 +0000 (19:35 -0600)]
Merge pull request #11003 from dfcastellanos/allow_seed_in_tria_distort
allow the user to set the RNG seed in distort_random()
Wolfgang Bangerth [Thu, 8 Oct 2020 01:34:05 +0000 (19:34 -0600)]
Merge pull request #11011 from marcfehling/dominated-fe-children
Refactor: Clean up hp-coarsening code.
Marc Fehling [Tue, 6 Oct 2020 01:34:25 +0000 (19:34 -0600)]
Clean up hp-coarsening code.
Wolfgang Bangerth [Wed, 7 Oct 2020 14:48:40 +0000 (08:48 -0600)]
Merge pull request #11016 from kronbichler/fix-gcc-10-warnings
Fix gcc-10 warnings about unsigned int comparison < 0
David F. Castellanos [Tue, 6 Oct 2020 18:23:11 +0000 (20:23 +0200)]
allow the user to set the RNG seed in distort_random() - squashed previous commits
Martin Kronbichler [Wed, 7 Oct 2020 12:45:37 +0000 (14:45 +0200)]
Avoid warning 'unsigned expression < 0 always false' by using int
Martin Kronbichler [Wed, 7 Oct 2020 12:45:21 +0000 (14:45 +0200)]
Avoid warning 'unsigned expression < 0 always false'
Martin Kronbichler [Wed, 7 Oct 2020 11:26:06 +0000 (13:26 +0200)]
Changelog
Martin Kronbichler [Wed, 7 Oct 2020 11:25:59 +0000 (13:25 +0200)]
New test case
Martin Kronbichler [Fri, 2 Oct 2020 10:15:32 +0000 (12:15 +0200)]
Use multiple point evaluation in ParticleHandler::sort_particles_...
Martin Kronbichler [Fri, 2 Oct 2020 10:15:09 +0000 (12:15 +0200)]
Multiple points in Mapping::transform_real_to_unit_cell
Martin Kronbichler [Wed, 7 Oct 2020 07:10:44 +0000 (09:10 +0200)]
Merge pull request #11015 from bangerth/inline
There is no need to mark a declaration as 'inline'.
Wolfgang Bangerth [Wed, 7 Oct 2020 03:12:06 +0000 (21:12 -0600)]
Merge pull request #11000 from marcfehling/child-iterators
Refactor: cell->child_iterators()
Daniel Arndt [Wed, 7 Oct 2020 03:02:44 +0000 (23:02 -0400)]
Merge pull request #11014 from bangerth/krishnakumarg1984-fixes_to_step10
Host of documentation improvements to step-10 and elsewhere.
Wolfgang Bangerth [Wed, 7 Oct 2020 00:15:53 +0000 (18:15 -0600)]
There is no need to mark a declaration as 'inline'.
Only the definition needs to be marked so.
Krishnakumar Gopalakrishnan [Wed, 15 Jan 2020 18:41:24 +0000 (18:41 +0000)]
Host of documentation improvements to step-10 and elsewhere.
Timo Heister [Tue, 6 Oct 2020 15:37:44 +0000 (11:37 -0400)]
Merge pull request #11012 from peterrum/write_vtu_with_pvtu_record_error_2
Improve error message of ExcFileNotOpen
Peter Munch [Tue, 6 Oct 2020 09:03:11 +0000 (11:03 +0200)]
Improve error message of ExcFileNotOpen
Martin Kronbichler [Tue, 6 Oct 2020 07:02:18 +0000 (09:02 +0200)]
Merge pull request #11008 from peterrum/gmg_type
Fix type of FineDoFHandlerView
Daniel Arndt [Tue, 6 Oct 2020 01:46:39 +0000 (21:46 -0400)]
Merge pull request #11010 from bangerth/docx
Minor doc update.
Marc Fehling [Tue, 6 Oct 2020 01:31:06 +0000 (19:31 -0600)]
Added cell->child_iterators().
Bruno Turcksin [Tue, 6 Oct 2020 00:54:25 +0000 (20:54 -0400)]
Merge pull request #11009 from zjiaqi2018/third_order_ssp_rk
TimeStepping: add SSP RK 3 and convergence tests
Wolfgang Bangerth [Tue, 6 Oct 2020 00:53:18 +0000 (18:53 -0600)]
Minor doc update.
Wolfgang Bangerth [Tue, 6 Oct 2020 00:51:07 +0000 (18:51 -0600)]
Merge pull request #9367 from krishnakumarg1984/fix_addvalue_doc
fix documentation on add_table. Fixes 9355
Peter Munch [Mon, 5 Oct 2020 20:57:24 +0000 (22:57 +0200)]
Fix type of FineDoFHandlerView
Daniel Arndt [Mon, 5 Oct 2020 19:06:57 +0000 (15:06 -0400)]
Merge pull request #11006 from Rombur/fix_include
Add missing header
Timo Heister [Mon, 5 Oct 2020 17:26:35 +0000 (13:26 -0400)]
Merge pull request #11005 from masterleinad/range_based_particles
Use range-based for loops in ParticleHandler
Bruno Turcksin [Mon, 5 Oct 2020 15:55:49 +0000 (15:55 +0000)]
Add missing header
Daniel Arndt [Mon, 5 Oct 2020 14:46:24 +0000 (10:46 -0400)]
Use range-based for loops for ParticleHandler
Jiaqi Zhang [Mon, 5 Oct 2020 15:06:00 +0000 (15:06 +0000)]
add ssp rk 3
Daniel Arndt [Mon, 5 Oct 2020 14:46:39 +0000 (10:46 -0400)]
Merge pull request #11002 from kronbichler/simplify_particle_handler
Make some more functions in ParticleHandler inline
Daniel Arndt [Mon, 5 Oct 2020 13:14:09 +0000 (09:14 -0400)]
Merge pull request #11001 from kronbichler/mpi_no_compression
Disable compression in MPI::some_to_some
Daniel Arndt [Mon, 5 Oct 2020 13:13:33 +0000 (09:13 -0400)]
Merge pull request #11004 from kronbichler/geometry_info_use_max
Use min/max rather than if statements
Martin Kronbichler [Mon, 5 Oct 2020 10:47:00 +0000 (12:47 +0200)]
Use min/max rather than if statements
Martin Kronbichler [Mon, 5 Oct 2020 07:48:35 +0000 (09:48 +0200)]
Make some more functions in ParticleHandler inline
Martin Kronbichler [Mon, 5 Oct 2020 07:44:27 +0000 (09:44 +0200)]
Disable compression in MPI::some_to_some
Peter Munch [Sun, 4 Oct 2020 18:49:12 +0000 (20:49 +0200)]
Merge pull request #10992 from kronbichler/affine_cell_approximation
Allow to compute affine approximation on arbitrary set of points
Martin Kronbichler [Sun, 4 Oct 2020 13:12:48 +0000 (15:12 +0200)]
Changelog
Peter Munch [Sat, 3 Oct 2020 22:21:52 +0000 (00:21 +0200)]
Merge pull request #10983 from kronbichler/speed_up_real_to_unit_point
Speed up MappingQGeneric::transform_real_to_unit_cell
Peter Munch [Sat, 3 Oct 2020 22:17:09 +0000 (00:17 +0200)]
Merge pull request #10999 from kronbichler/particle_init_remove_quadratic_complexity
Avoid quadratic complexity in ParticleHandler::insert_global_particles
Martin Kronbichler [Sat, 3 Oct 2020 19:13:18 +0000 (21:13 +0200)]
Compile grid_tools.cc in a single file
Martin Kronbichler [Fri, 2 Oct 2020 11:05:37 +0000 (13:05 +0200)]
Add test case
Martin Kronbichler [Fri, 2 Oct 2020 10:14:26 +0000 (12:14 +0200)]
Allow to compute affine approximation on arbitrary set of points
Martin Kronbichler [Sat, 3 Oct 2020 18:31:25 +0000 (20:31 +0200)]
Avoid quadratic complexity in ParticleHandler::insert_global_particles
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