https://gitweb.dealii.org/ - dealii-svn.git/log

heister [Wed, 2 Jan 2013 17:25:42 +0000 (17:25 +0000)]

remove commented code

git-svn-id: https://svn.dealii.org/branches/branch_merge_mg_into_dof_handler@27903 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Wed, 2 Jan 2013 17:22:26 +0000 (17:22 +0000)]

re(add) deleted comment

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heister [Wed, 2 Jan 2013 17:15:24 +0000 (17:15 +0000)]

document

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heister [Wed, 2 Jan 2013 17:05:56 +0000 (17:05 +0000)]

update comment

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heister [Wed, 2 Jan 2013 16:52:26 +0000 (16:52 +0000)]

fix typo

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heister [Wed, 2 Jan 2013 16:48:51 +0000 (16:48 +0000)]

revert Makefile change on branch

git-svn-id: https://svn.dealii.org/branches/branch_merge_mg_into_dof_handler@27894 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 21 Dec 2012 17:22:23 +0000 (17:22 +0000)]

add comments to new methods in DoFHandler and fix missing comment ending

git-svn-id: https://svn.dealii.org/branches/branch_merge_mg_into_dof_handler@27852 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 21 Dec 2012 02:54:58 +0000 (02:54 +0000)]

revert whitespace changes

git-svn-id: https://svn.dealii.org/branches/branch_merge_mg_into_dof_handler@27849 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 21 Dec 2012 02:51:40 +0000 (02:51 +0000)]

merge from mainline

git-svn-id: https://svn.dealii.org/branches/branch_merge_mg_into_dof_handler@27848 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 21 Dec 2012 02:51:02 +0000 (02:51 +0000)]

make indent

git-svn-id: https://svn.dealii.org/trunk@27847 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 21 Dec 2012 02:47:21 +0000 (02:47 +0000)]

call indent for each file separately in the hope that this fixes some strange indentation inconsistencies

git-svn-id: https://svn.dealii.org/trunk@27846 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 21 Dec 2012 02:12:49 +0000 (02:12 +0000)]

revert whitespace

git-svn-id: https://svn.dealii.org/branches/branch_merge_mg_into_dof_handler@27845 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 21 Dec 2012 02:09:56 +0000 (02:09 +0000)]

revert whitespace

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heister [Fri, 21 Dec 2012 02:07:39 +0000 (02:07 +0000)]

remove some nonsense comments and revert whitespace

git-svn-id: https://svn.dealii.org/branches/branch_merge_mg_into_dof_handler@27843 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 21 Dec 2012 02:05:48 +0000 (02:05 +0000)]

document function and revert whitespace changes

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heister [Fri, 21 Dec 2012 01:40:23 +0000 (01:40 +0000)]

revert more whitespace crap

git-svn-id: https://svn.dealii.org/branches/branch_merge_mg_into_dof_handler@27841 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 21 Dec 2012 01:38:13 +0000 (01:38 +0000)]

revert whitespace changes

git-svn-id: https://svn.dealii.org/branches/branch_merge_mg_into_dof_handler@27840 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 21 Dec 2012 01:36:49 +0000 (01:36 +0000)]

revert whitespace changes

git-svn-id: https://svn.dealii.org/branches/branch_merge_mg_into_dof_handler@27839 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Fri, 21 Dec 2012 01:26:34 +0000 (01:26 +0000)]

cleanup: remove whitespace changes

git-svn-id: https://svn.dealii.org/branches/branch_merge_mg_into_dof_handler@27838 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Thu, 20 Dec 2012 22:08:03 +0000 (22:08 +0000)]

fix bug

git-svn-id: https://svn.dealii.org/branches/branch_merge_mg_into_dof_handler@27837 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Thu, 20 Dec 2012 22:07:15 +0000 (22:07 +0000)]

make indent

git-svn-id: https://svn.dealii.org/branches/branch_merge_mg_into_dof_handler@27836 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Thu, 20 Dec 2012 19:12:35 +0000 (19:12 +0000)]

merge changes from branch parallel-mg

git-svn-id: https://svn.dealii.org/branches/branch_merge_mg_into_dof_handler@27834 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Wed, 19 Dec 2012 17:40:48 +0000 (17:40 +0000)]

merge from mainline

git-svn-id: https://svn.dealii.org/branches/branch_merge_mg_into_dof_handler@27828 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Wed, 19 Dec 2012 11:34:13 +0000 (11:34 +0000)]

Explicitly instantiate some internal structs to ensure these are always generated.

git-svn-id: https://svn.dealii.org/trunk@27827 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Wed, 19 Dec 2012 11:07:02 +0000 (11:07 +0000)]

Use generic instantiation procedure for selecting vectors in solution transfer.

git-svn-id: https://svn.dealii.org/trunk@27826 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Mon, 17 Dec 2012 09:22:26 +0000 (09:22 +0000)]

Matrix-vector product with deal.II vectors and Trilinos matrix are can be readily performed.

git-svn-id: https://svn.dealii.org/trunk@27825 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Fri, 14 Dec 2012 12:13:31 +0000 (12:13 +0000)]

Add one more access function. Reindent comments.

git-svn-id: https://svn.dealii.org/trunk@27823 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 14 Dec 2012 02:41:42 +0000 (02:41 +0000)]

Augment a comment.

git-svn-id: https://svn.dealii.org/trunk@27821 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 14 Dec 2012 02:30:13 +0000 (02:30 +0000)]

Augment documentation some more.

git-svn-id: https://svn.dealii.org/trunk@27820 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Thu, 13 Dec 2012 23:33:04 +0000 (23:33 +0000)]

merge from mainline

git-svn-id: https://svn.dealii.org/branches/branch_merge_mg_into_dof_handler@27818 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 13 Dec 2012 07:15:16 +0000 (07:15 +0000)]

Augment documentation.

git-svn-id: https://svn.dealii.org/trunk@27805 0785d39b-7218-0410-832d-ea1e28bc413d

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maier [Wed, 12 Dec 2012 21:23:02 +0000 (21:23 +0000)]

Some minor bugfixes in the testsuite

git-svn-id: https://svn.dealii.org/trunk@27802 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Wed, 12 Dec 2012 15:31:35 +0000 (15:31 +0000)]

Undo 27799 on vectorization as the new trick did the same thing and obscured things.

git-svn-id: https://svn.dealii.org/trunk@27801 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Wed, 12 Dec 2012 14:37:49 +0000 (14:37 +0000)]

Removed two more occurences of inproper use of reinterpret_cast

git-svn-id: https://svn.dealii.org/trunk@27800 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Wed, 12 Dec 2012 14:19:47 +0000 (14:19 +0000)]

Replace reinterpret_cast by static_cast in access to individual elements of vectorized data types.

git-svn-id: https://svn.dealii.org/trunk@27799 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Wed, 12 Dec 2012 13:55:01 +0000 (13:55 +0000)]

Avoid some more reinterpret_cast

git-svn-id: https://svn.dealii.org/trunk@27797 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Wed, 12 Dec 2012 13:38:38 +0000 (13:38 +0000)]

Avoid reinterpret_cast by making the declaration of struct ShapeFunctionData in FEValuesViews::Scalar/Vector public.

git-svn-id: https://svn.dealii.org/trunk@27796 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Wed, 12 Dec 2012 12:58:51 +0000 (12:58 +0000)]

There used to be a requirement that threads can only be joined by the thread that created it. This doesn't appear to be the case any more, so we can't rely on it any more to take shortcuts.

git-svn-id: https://svn.dealii.org/trunk@27795 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Wed, 12 Dec 2012 12:21:26 +0000 (12:21 +0000)]

Mention r27793. Also reorder things a bit.

git-svn-id: https://svn.dealii.org/trunk@27794 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Wed, 12 Dec 2012 12:21:11 +0000 (12:21 +0000)]

Patch by Alexander Grayver: Release memort in SparseDirectMUMPS.

git-svn-id: https://svn.dealii.org/trunk@27793 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Mon, 10 Dec 2012 10:33:22 +0000 (10:33 +0000)]

Fix one border case in initialization on non-constant Jacobians.

git-svn-id: https://svn.dealii.org/trunk@27789 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Sun, 9 Dec 2012 11:01:53 +0000 (11:01 +0000)]

add charset

git-svn-id: https://svn.dealii.org/trunk@27787 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Sun, 9 Dec 2012 10:06:32 +0000 (10:06 +0000)]

ConstraintMatrix can perform distribute_local_to_global also in non-closed form as long as there are no constraints without any errors (this enables the use of a ConstraintMatrix dummy when one wants to more quickly write into sparse matrices).

git-svn-id: https://svn.dealii.org/trunk@27786 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Sun, 9 Dec 2012 09:57:03 +0000 (09:57 +0000)]

One more reindentation/refill of comments.

git-svn-id: https://svn.dealii.org/trunk@27785 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Sun, 9 Dec 2012 09:56:21 +0000 (09:56 +0000)]

Small update in comment.

git-svn-id: https://svn.dealii.org/trunk@27784 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Sun, 9 Dec 2012 09:55:15 +0000 (09:55 +0000)]

Reindent/refill comments in a few files to improve readability.

git-svn-id: https://svn.dealii.org/trunk@27783 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Sat, 8 Dec 2012 19:54:35 +0000 (19:54 +0000)]

Add operator!=.

git-svn-id: https://svn.dealii.org/trunk@27782 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Sat, 8 Dec 2012 19:09:01 +0000 (19:09 +0000)]

add a note

git-svn-id: https://svn.dealii.org/trunk@27781 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Sat, 8 Dec 2012 18:35:14 +0000 (18:35 +0000)]

missing properties

git-svn-id: https://svn.dealii.org/trunk@27780 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 7 Dec 2012 19:55:47 +0000 (19:55 +0000)]

Doc updates.

git-svn-id: https://svn.dealii.org/trunk@27779 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 7 Dec 2012 19:55:13 +0000 (19:55 +0000)]

Minor doc updates.

git-svn-id: https://svn.dealii.org/trunk@27778 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 7 Dec 2012 09:46:13 +0000 (09:46 +0000)]

Update documentation.

git-svn-id: https://svn.dealii.org/trunk@27777 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Fri, 7 Dec 2012 09:07:10 +0000 (09:07 +0000)]

Improve comments. Improve check for over-/underflow in l2_norm slightly.

git-svn-id: https://svn.dealii.org/trunk@27776 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Thu, 6 Dec 2012 14:14:07 +0000 (14:14 +0000)]

Revised get_function_xxx methods: Put the evaluation part into separate functions. This makes code simpler as several user methods can use the same implementation. Also, we avoid to recompile them for _every_ global VectorType with exactly the same content. This speeds up compilation of fe_values.o by about a factor 2.

git-svn-id: https://svn.dealii.org/trunk@27775 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Thu, 6 Dec 2012 07:45:45 +0000 (07:45 +0000)]

Replace old repository links

git-svn-id: https://svn.dealii.org/trunk@27774 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Wed, 5 Dec 2012 21:11:38 +0000 (21:11 +0000)]

Move inline functions to where they should be.

git-svn-id: https://svn.dealii.org/trunk@27773 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Wed, 5 Dec 2012 17:27:56 +0000 (17:27 +0000)]

update publication

git-svn-id: https://svn.dealii.org/trunk@27767 0785d39b-7218-0410-832d-ea1e28bc413d

Add a test for GeometryInfo<dim>::face_to_cell_vertices and face_to_cell_lines

git-svn-id: https://svn.dealii.org/trunk@27758 0785d39b-7218-0410-832d-ea1e28bc413d

Bugfix: Implement correct return values for ->face_flip and ->face_rotation in 1d and 2d

This fixes a regression introduced with r27714 which made
GeometryInfo<2>::child_cell_on_face face_flip aware in 2d.

git-svn-id: https://svn.dealii.org/trunk@27757 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Tue, 4 Dec 2012 17:56:36 +0000 (17:56 +0000)]

more big output files removed

git-svn-id: https://svn.dealii.org/trunk@27756 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Tue, 4 Dec 2012 17:42:19 +0000 (17:42 +0000)]

remove large output files from several steps

git-svn-id: https://svn.dealii.org/trunk@27755 0785d39b-7218-0410-832d-ea1e28bc413d

Give SLEPc the MPI_InitFinalize interface like what PETSc has.

git-svn-id: https://svn.dealii.org/trunk@27753 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Tue, 4 Dec 2012 06:09:36 +0000 (06:09 +0000)]

Fix double-free caused by wrong copy constructor of FESystem.

git-svn-id: https://svn.dealii.org/trunk@27749 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Tue, 4 Dec 2012 05:54:31 +0000 (05:54 +0000)]

merge to add test to mainline

git-svn-id: https://svn.dealii.org/trunk@27748 0785d39b-7218-0410-832d-ea1e28bc413d

Deuglify

Also, try to find a fixpoint (*) for initializer lists under astyle

(*) as usual, with the help of a fixpoint iteration...

git-svn-id: https://svn.dealii.org/trunk@27742 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Mon, 3 Dec 2012 19:44:54 +0000 (19:44 +0000)]

make indent

git-svn-id: https://svn.dealii.org/trunk@27737 0785d39b-7218-0410-832d-ea1e28bc413d

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heister [Mon, 3 Dec 2012 19:24:54 +0000 (19:24 +0000)]

merge from mainline

git-svn-id: https://svn.dealii.org/branches/branch_merge_mg_into_dof_handler@27734 0785d39b-7218-0410-832d-ea1e28bc413d

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kanschat [Mon, 3 Dec 2012 14:21:08 +0000 (14:21 +0000)]

reformat documentation and add memory consumption

git-svn-id: https://svn.dealii.org/trunk@27728 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 3 Dec 2012 08:16:25 +0000 (08:16 +0000)]

Avoid a couple of (stupid) warnings.

git-svn-id: https://svn.dealii.org/trunk@27727 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Mon, 3 Dec 2012 07:18:50 +0000 (07:18 +0000)]

Reformat one statement.

git-svn-id: https://svn.dealii.org/trunk@27726 0785d39b-7218-0410-832d-ea1e28bc413d

Reintroduce the old make_periodicity_constraints interface as well (because this one is _very_ convenient)

git-svn-id: https://svn.dealii.org/trunk@27722 0785d39b-7218-0410-832d-ea1e28bc413d

Add some Assertions, reindent

git-svn-id: https://svn.dealii.org/trunk@27721 0785d39b-7218-0410-832d-ea1e28bc413d

update changes.h

git-svn-id: https://svn.dealii.org/trunk@27719 0785d39b-7218-0410-832d-ea1e28bc413d

A new test for make_periodicity_constraints

git-svn-id: https://svn.dealii.org/trunk@27718 0785d39b-7218-0410-832d-ea1e28bc413d

Bugfix: Make DoFTools::make_periodicity_constraints orientation aware

With this it is now possible to prescribe an orientation for the low level
interface, the high level interface will detect the necessary orientation
automatically, *yay*.

git-svn-id: https://svn.dealii.org/trunk@27717 0785d39b-7218-0410-832d-ea1e28bc413d

A new test for GridTools::collect_periodic_face_pairs

git-svn-id: https://svn.dealii.org/trunk@27716 0785d39b-7218-0410-832d-ea1e28bc413d

Bugfixes:

- Refactor GridTools::collect_periodic_cell_pairs to GridTools::collect_periodic_face_pairs

- Make GridTools::collect_periodix_face_pairs orientation (orientation, flip, rotation) aware

git-svn-id: https://svn.dealii.org/trunk@27715 0785d39b-7218-0410-832d-ea1e28bc413d

Bugfix: Fix GeometryInfo<2>::child_cell_on_face to respect face_flip

This change does not trigger any regression in the test suite

git-svn-id: https://svn.dealii.org/trunk@27714 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Sat, 1 Dec 2012 12:37:39 +0000 (12:37 +0000)]

Comment out unused function arguments.

git-svn-id: https://svn.dealii.org/trunk@27713 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Fri, 30 Nov 2012 14:00:28 +0000 (14:00 +0000)]

Merge from mainline.

git-svn-id: https://svn.dealii.org/branches/branch_merge_mg_into_dof_handler@27711 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 29 Nov 2012 23:42:30 +0000 (23:42 +0000)]

Remove now outdated files.

git-svn-id: https://svn.dealii.org/trunk@27709 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 29 Nov 2012 16:18:56 +0000 (16:18 +0000)]

Update results for PETSc 3.3.

git-svn-id: https://svn.dealii.org/trunk@27705 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 29 Nov 2012 16:16:47 +0000 (16:16 +0000)]

Remove a test that checks PETSc's Richardson solver but that has never worked and that with PETSc 3.3 now actually aborts.

git-svn-id: https://svn.dealii.org/trunk@27704 0785d39b-7218-0410-832d-ea1e28bc413d

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kronbichler [Thu, 29 Nov 2012 16:05:54 +0000 (16:05 +0000)]

Allow ConstraintMatrix::distribute_local_to_global with ChunkSparseMatrix.

git-svn-id: https://svn.dealii.org/trunk@27703 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 29 Nov 2012 15:07:56 +0000 (15:07 +0000)]

Reindent a couple comments. Primarily do so to trigger an automated run of the
testsuite to see if the new setup works.

git-svn-id: https://svn.dealii.org/trunk@27702 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Thu, 29 Nov 2012 14:15:46 +0000 (14:15 +0000)]

Minor indentation changes.

git-svn-id: https://svn.dealii.org/trunk@27701 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Tue, 27 Nov 2012 14:10:29 +0000 (14:10 +0000)]

Minor markup fixes.

git-svn-id: https://svn.dealii.org/trunk@27696 0785d39b-7218-0410-832d-ea1e28bc413d

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bangerth [Tue, 27 Nov 2012 14:09:14 +0000 (14:09 +0000)]

Markup fix.

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bangerth [Tue, 27 Nov 2012 03:54:03 +0000 (03:54 +0000)]

Fix grammar.

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bangerth [Mon, 26 Nov 2012 20:02:27 +0000 (20:02 +0000)]

Update an output file that produces different (now correct) results after r27655.

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heister [Mon, 26 Nov 2012 16:39:45 +0000 (16:39 +0000)]

fix comment

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maier [Mon, 26 Nov 2012 14:48:34 +0000 (14:48 +0000)]

Reindent the comments in fe_update_flags.h

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kronbichler [Mon, 26 Nov 2012 14:37:31 +0000 (14:37 +0000)]

Adjust problem size to what is shown in results.

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kronbichler [Mon, 26 Nov 2012 13:08:18 +0000 (13:08 +0000)]

FE_FaceQ should have unit face support points just like FE_DGQ has unit cell support points.

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bangerth [Mon, 26 Nov 2012 04:57:29 +0000 (04:57 +0000)]

Add a version of DoFTools::make_zero_boundary_constraints that works on only part of the boundary.

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bangerth [Mon, 26 Nov 2012 04:04:13 +0000 (04:04 +0000)]

Introduce numbers::invalid_boundary_id. Fix up documentation in a couple of other places.

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kronbichler [Sat, 24 Nov 2012 14:58:27 +0000 (14:58 +0000)]

Simplify fixed_power.

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maier [Fri, 23 Nov 2012 15:41:25 +0000 (15:41 +0000)]

Prettify comments and indent in exceptions.h

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kronbichler [Fri, 23 Nov 2012 10:11:05 +0000 (10:11 +0000)]

Fix error message when deal.II uses static libraries and Trilinos shared ones.

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kronbichler [Fri, 23 Nov 2012 10:04:01 +0000 (10:04 +0000)]

VectorTools::interpolate should not call compress on parallel::distributed::Vector as this zeros out those entries that are not locally active but included via constraints. Test step-48 and step-37.

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