]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
15 months agofind_active_cell_around_point(): use auto.
David Wells [Thu, 8 Jun 2023 16:41:13 +0000 (12:41 -0400)]
find_active_cell_around_point(): use auto.

15 months agoMerge pull request #15322 from marcfehling/isnan-2
Martin Kronbichler [Wed, 7 Jun 2023 08:15:56 +0000 (10:15 +0200)]
Merge pull request #15322 from marcfehling/isnan-2

Prefer numbers::is_nan over std::isnan

15 months agoMerge pull request #15321 from marcfehling/github-intel-icx
Daniel Arndt [Wed, 7 Jun 2023 03:34:10 +0000 (23:34 -0400)]
Merge pull request #15321 from marcfehling/github-intel-icx

15 months agoMerge pull request #15316 from bangerth/69
Marc Fehling [Tue, 6 Jun 2023 21:23:11 +0000 (15:23 -0600)]
Merge pull request #15316 from bangerth/69

Minor updates to step-69.

15 months agoMerge pull request #15317 from bangerth/62
Marc Fehling [Tue, 6 Jun 2023 21:22:49 +0000 (15:22 -0600)]
Merge pull request #15317 from bangerth/62

Minor updates to step-62.

15 months agoPrefer numbers::is_nan over std::isnan 15322/head
Marc Fehling [Tue, 6 Jun 2023 21:20:35 +0000 (15:20 -0600)]
Prefer numbers::is_nan over std::isnan

15 months agoOnly install new Intel compilers. 15321/head
Marc Fehling [Mon, 5 Jun 2023 16:46:09 +0000 (10:46 -0600)]
Only install new Intel compilers.

15 months agoMerge pull request #15308 from masterleinad/test_icpx
Marc Fehling [Tue, 6 Jun 2023 21:05:55 +0000 (15:05 -0600)]
Merge pull request #15308 from masterleinad/test_icpx

Test icpx instead of icpc

15 months agoMerge pull request #15315 from bangerth/const
Daniel Arndt [Tue, 6 Jun 2023 19:06:07 +0000 (15:06 -0400)]
Merge pull request #15315 from bangerth/const

15 months agoAnother try for MSVC 15308/head
Daniel Arndt [Tue, 6 Jun 2023 14:14:23 +0000 (10:14 -0400)]
Another try for MSVC

15 months agoMerge pull request #15314 from marcfehling/isfinite
Wolfgang Bangerth [Tue, 6 Jun 2023 14:36:17 +0000 (08:36 -0600)]
Merge pull request #15314 from marcfehling/isfinite

Use numbers::is_finite whenever we compare with infinity.

15 months agoMinor updates to step-62. 15317/head
Wolfgang Bangerth [Tue, 6 Jun 2023 14:34:41 +0000 (08:34 -0600)]
Minor updates to step-62.

15 months agoMinor updates to step-69. 15316/head
Wolfgang Bangerth [Tue, 6 Jun 2023 14:33:21 +0000 (08:33 -0600)]
Minor updates to step-69.

15 months agoMark loop indices as 'const' where possible. 15315/head
Wolfgang Bangerth [Tue, 6 Jun 2023 14:21:06 +0000 (08:21 -0600)]
Mark loop indices as 'const' where possible.

15 months agoMerge pull request #15313 from bangerth/args
David Wells [Tue, 6 Jun 2023 12:33:30 +0000 (08:33 -0400)]
Merge pull request #15313 from bangerth/args

Be systematic in how we name arguments of FEValues member functions.

15 months agoMerge pull request #15164 from masterleinad/trilinos_14
Matthias Maier [Tue, 6 Jun 2023 05:27:06 +0000 (05:27 +0000)]
Merge pull request #15164 from masterleinad/trilinos_14

Allow using Trilinos 14.0

15 months agoMerge pull request #15307 from drwells/gmsh-codim-1
Wolfgang Bangerth [Tue, 6 Jun 2023 03:41:44 +0000 (21:41 -0600)]
Merge pull request #15307 from drwells/gmsh-codim-1

Fix dim = 1 mesh loading with gmsh.

15 months agoMerge pull request #15311 from drwells/fix-ifdef-comment
Marc Fehling [Tue, 6 Jun 2023 03:40:24 +0000 (21:40 -0600)]
Merge pull request #15311 from drwells/fix-ifdef-comment

Fix a comment at the end of an ifdef.

15 months agoMerge pull request #15312 from marcfehling/muparser-isfinite
Wolfgang Bangerth [Tue, 6 Jun 2023 03:36:27 +0000 (21:36 -0600)]
Merge pull request #15312 from marcfehling/muparser-isfinite

Hotfix muparser: Fix problem with IntelLLVM finite math

15 months agoUse numbers::is_finite whenever we compare with infinity. 15314/head
Marc Fehling [Tue, 6 Jun 2023 02:43:16 +0000 (20:43 -0600)]
Use numbers::is_finite whenever we compare with infinity.

15 months agoTry making MSVC happy
Daniel Arndt [Tue, 6 Jun 2023 00:23:56 +0000 (20:23 -0400)]
Try making MSVC happy

15 months agoHotfix muparser: Fix problem with IntelLLVM finite math 15312/head
Marc Fehling [Mon, 5 Jun 2023 21:45:21 +0000 (15:45 -0600)]
Hotfix muparser: Fix problem with IntelLLVM finite math

15 months agoBe systematic in how we name arguments of FEValues member functions. 15313/head
Wolfgang Bangerth [Mon, 5 Jun 2023 23:08:17 +0000 (17:08 -0600)]
Be systematic in how we name arguments of FEValues member functions.

15 months agoFix a comment at the end of an ifdef. 15311/head
David Wells [Mon, 5 Jun 2023 19:39:17 +0000 (15:39 -0400)]
Fix a comment at the end of an ifdef.

15 months agoAvoid a couple compiler warnings
Daniel Arndt [Mon, 5 Jun 2023 15:18:04 +0000 (11:18 -0400)]
Avoid a couple compiler warnings

15 months agoFix dim = 1 mesh loading with gmsh. 15307/head
David Wells [Mon, 5 Jun 2023 18:27:23 +0000 (14:27 -0400)]
Fix dim = 1 mesh loading with gmsh.

15 months agoTest icpx instead of icpc
Daniel Arndt [Mon, 5 Jun 2023 13:29:49 +0000 (09:29 -0400)]
Test icpx instead of icpc

15 months agoMerge pull request #15299 from bangerth/reference
Timo Heister [Sun, 4 Jun 2023 19:29:09 +0000 (15:29 -0400)]
Merge pull request #15299 from bangerth/reference

Avoid taking references on temporaries.

15 months agoMerge pull request #15300 from marcfehling/fix-test
Peter Munch [Sun, 4 Jun 2023 18:19:17 +0000 (20:19 +0200)]
Merge pull request #15300 from marcfehling/fix-test

Fix matrix_free test.

15 months agoFix matrix_free test. 15300/head
Marc Fehling [Sun, 4 Jun 2023 03:15:15 +0000 (21:15 -0600)]
Fix matrix_free test.

15 months agoAvoid taking references on temporaries. 15299/head
Wolfgang Bangerth [Sun, 4 Jun 2023 02:46:29 +0000 (20:46 -0600)]
Avoid taking references on temporaries.

15 months agoMerge pull request #15218 from drwells/distance-to-unit-cell
Wolfgang Bangerth [Sun, 4 Jun 2023 02:09:20 +0000 (20:09 -0600)]
Merge pull request #15218 from drwells/distance-to-unit-cell

Add a function for projecting points onto reference cells.

15 months agoMerge pull request #15296 from drwells/snes-p4est
Wolfgang Bangerth [Sun, 4 Jun 2023 01:24:09 +0000 (19:24 -0600)]
Merge pull request #15296 from drwells/snes-p4est

Mark two tests as dependent on p4est.

15 months agoMark two tests as dependent on p4est. 15296/head
David Wells [Sat, 3 Jun 2023 16:51:12 +0000 (12:51 -0400)]
Mark two tests as dependent on p4est.

15 months agoAdd a function for projecting points onto reference cells. 15218/head
David Wells [Mon, 15 May 2023 16:36:25 +0000 (12:36 -0400)]
Add a function for projecting points onto reference cells.

This can replace GeometryInfo::distance_to_unit_cell() and
GeometryInfo::project_to_unit_cell() in most circumstances.

There is no clear way to define the infinity norm for sloped surfaces (like the
top face of a tetrahedron), so this new function uses the Euclidean norm.

15 months agoMerge pull request #14595 from marcfehling/blockvector-reinit
Martin Kronbichler [Sat, 3 Jun 2023 06:06:00 +0000 (08:06 +0200)]
Merge pull request #14595 from marcfehling/blockvector-reinit

Added reinit(partitioners) to LA::distributed::BlockVector.

15 months agoMerge pull request #15273 from bergbauer/evaluate_integrate_values
Martin Kronbichler [Fri, 2 Jun 2023 10:40:29 +0000 (12:40 +0200)]
Merge pull request #15273 from bergbauer/evaluate_integrate_values

Tensor product kernels: Evaluate integrate values only

15 months agoMerge pull request #14346 from peterrum/process_dofs_vectorized_transpose_constant_offset
Martin Kronbichler [Fri, 2 Jun 2023 10:39:55 +0000 (12:39 +0200)]
Merge pull request #14346 from peterrum/process_dofs_vectorized_transpose_constant_offset

Add process_dofs_vectorized_transpose() variants with constant_offset

15 months agoMerge pull request #15294 from drwells/aspect-ratio-lapack
Martin Kronbichler [Fri, 2 Jun 2023 08:58:07 +0000 (10:58 +0200)]
Merge pull request #15294 from drwells/aspect-ratio-lapack

Document that compute_aspect_ratio_of_cells() requires LAPACK.

15 months agoAdd process_dofs_vectorized_transpose() variants with constant_offset 14346/head
Peter Munch [Mon, 10 Oct 2022 13:59:58 +0000 (15:59 +0200)]
Add process_dofs_vectorized_transpose() variants with constant_offset

15 months agoImplement path for values only 15273/head
Maximilian Bergbauer [Fri, 28 Apr 2023 12:35:01 +0000 (14:35 +0200)]
Implement path for values only

15 months agoMerge pull request #15293 from drwells/wrap-petsc-lines
Wolfgang Bangerth [Thu, 1 Jun 2023 21:31:56 +0000 (15:31 -0600)]
Merge pull request #15293 from drwells/wrap-petsc-lines

Wrap some PETSc documentation lines.

15 months agoMerge pull request #15270 from Rombur/nvcc_warnings
Daniel Arndt [Thu, 1 Jun 2023 18:55:20 +0000 (14:55 -0400)]
Merge pull request #15270 from Rombur/nvcc_warnings

15 months agoDocument that compute_aspect_ratio_of_cells() requires LAPACK. 15294/head
David Wells [Thu, 1 Jun 2023 18:18:57 +0000 (14:18 -0400)]
Document that compute_aspect_ratio_of_cells() requires LAPACK.

15 months agoWrap some PETSc documentation lines. 15293/head
David Wells [Thu, 1 Jun 2023 18:10:43 +0000 (14:10 -0400)]
Wrap some PETSc documentation lines.

These are quite long and missing some HTML.

15 months agoMerge pull request #15281 from bergbauer/integrate_JxW
David Wells [Thu, 1 Jun 2023 17:19:37 +0000 (13:19 -0400)]
Merge pull request #15281 from bergbauer/integrate_JxW

FEPointEvaluation: Integrate should use JxW

15 months agoAutomatically use JxW in integrate when available 15281/head
Maximilian Bergbauer [Fri, 26 May 2023 16:58:04 +0000 (18:58 +0200)]
Automatically use JxW in integrate when available

15 months agoMerge pull request #15287 from bergbauer/remove_update_JxW
Martin Kronbichler [Thu, 1 Jun 2023 11:44:00 +0000 (13:44 +0200)]
Merge pull request #15287 from bergbauer/remove_update_JxW

MappingFEField: Remove update_JxW_values for Piola transform

15 months agoMerge pull request #15289 from peterrum/apply_inverse_tmp_remove
Martin Kronbichler [Thu, 1 Jun 2023 11:41:52 +0000 (13:41 +0200)]
Merge pull request #15289 from peterrum/apply_inverse_tmp_remove

TensorProductMatrixSymmetricSum: small modifications

15 months agoMerge pull request #15288 from kronbichler/fix_mg_transfer
Peter Munch [Thu, 1 Jun 2023 10:53:21 +0000 (12:53 +0200)]
Merge pull request #15288 from kronbichler/fix_mg_transfer

MGTwoLevelTransfer: Clean old vector content in prolongate_add

15 months agoMerge pull request #15291 from bangerth/changelog
Luca Heltai [Thu, 1 Jun 2023 07:47:52 +0000 (09:47 +0200)]
Merge pull request #15291 from bangerth/changelog

Add changelog entry.

15 months agoUpdate test output 15288/head
Peter Munch [Thu, 1 Jun 2023 07:07:47 +0000 (09:07 +0200)]
Update test output

15 months agoAdd a shim for std::clamp().
David Wells [Thu, 1 Jun 2023 03:59:47 +0000 (23:59 -0400)]
Add a shim for std::clamp().

15 months agoAdd changelog entry. 15291/head
Wolfgang Bangerth [Wed, 31 May 2023 23:15:55 +0000 (17:15 -0600)]
Add changelog entry.

15 months agoMerge pull request #15290 from masterleinad/add_citation_bib
Marc Fehling [Wed, 31 May 2023 22:28:48 +0000 (16:28 -0600)]
Merge pull request #15290 from masterleinad/add_citation_bib

Add CITATIONS.bib file to suggest citation in GitHub

15 months agoMerge pull request #15217 from kronbichler/generalize_interfaces
Peter Munch [Wed, 31 May 2023 22:24:59 +0000 (00:24 +0200)]
Merge pull request #15217 from kronbichler/generalize_interfaces

Make MatrixFree evaluation kernels more flexible w.r.t. number type

15 months agoFix tests 15287/head
Maximilian Bergbauer [Wed, 31 May 2023 21:06:38 +0000 (23:06 +0200)]
Fix tests

15 months agoDrop 9.3 release 15290/head
Daniel Arndt [Wed, 31 May 2023 20:54:36 +0000 (16:54 -0400)]
Drop 9.3 release

15 months agoFix reviewer's comments 15270/head
Bruno Turcksin [Wed, 31 May 2023 01:05:54 +0000 (01:05 +0000)]
Fix reviewer's comments

15 months agoFix warnings when compiling with nvcc
Bruno Turcksin [Thu, 25 May 2023 20:48:20 +0000 (20:48 +0000)]
Fix warnings when compiling with nvcc

15 months agoAdd CITATIONS.bib file
Daniel Arndt [Wed, 31 May 2023 19:33:32 +0000 (15:33 -0400)]
Add CITATIONS.bib file

15 months agoMerge pull request #14536 from marcfehling/reinit-ghosted
Martin Kronbichler [Wed, 31 May 2023 19:16:03 +0000 (21:16 +0200)]
Merge pull request #14536 from marcfehling/reinit-ghosted

Choose to initialize ghost elements with reinit(partitioner).

15 months agoDon't use tmp vector 15289/head
Peter Munch [Wed, 31 May 2023 17:39:21 +0000 (19:39 +0200)]
Don't use tmp vector

15 months agoMerge pull request #15262 from masterleinad/convert_cuda_matrix_free_tests
Martin Kronbichler [Wed, 31 May 2023 18:00:48 +0000 (20:00 +0200)]
Merge pull request #15262 from masterleinad/convert_cuda_matrix_free_tests

Test CUDAWrappers::MatrixFree not only for DEAL_II_WITH_CUDA

15 months agoMerge pull request #15274 from bergbauer/skip_renumbering
Martin Kronbichler [Wed, 31 May 2023 17:44:51 +0000 (19:44 +0200)]
Merge pull request #15274 from bergbauer/skip_renumbering

FEPointEvaluation: skip renumbering when possible

15 months agoMerge pull request #15209 from jh66637/non_nested_dg_mg_transfer
Martin Kronbichler [Wed, 31 May 2023 17:33:29 +0000 (19:33 +0200)]
Merge pull request #15209 from jh66637/non_nested_dg_mg_transfer

Integrate DG into non-nested MG

15 months agoMerge pull request #15165 from jh66637/add_structure_convertable_to_rpe_data
Martin Kronbichler [Wed, 31 May 2023 17:28:12 +0000 (19:28 +0200)]
Merge pull request #15165 from jh66637/add_structure_convertable_to_rpe_data

Introduce DistributedComputeIntersectionLocationsInternal

15 months agoAdd assertion regarding array lengths 15217/head
Martin Kronbichler [Wed, 31 May 2023 14:46:36 +0000 (16:46 +0200)]
Add assertion regarding array lengths

15 months agoDo not use Number::size() by switching to more generic access methods
Martin Kronbichler [Sun, 21 May 2023 20:28:27 +0000 (22:28 +0200)]
Do not use Number::size() by switching to more generic access methods

15 months agoSwitch order of template arguments
Martin Kronbichler [Sun, 21 May 2023 18:05:02 +0000 (20:05 +0200)]
Switch order of template arguments

15 months agoMake MatrixFree evaluation kernels more flexible w.r.t. number type
Martin Kronbichler [Mon, 15 May 2023 14:32:26 +0000 (16:32 +0200)]
Make MatrixFree evaluation kernels more flexible w.r.t. number type

15 months agoMGTwoLevelTransfer: Make sure ot clean old vector content in prolongate_add
Martin Kronbichler [Wed, 31 May 2023 14:35:50 +0000 (16:35 +0200)]
MGTwoLevelTransfer: Make sure ot clean old vector content in prolongate_add

15 months agoMerge pull request #15282 from masterleinad/fix_clang_tidy
Timo Heister [Wed, 31 May 2023 13:04:36 +0000 (09:04 -0400)]
Merge pull request #15282 from masterleinad/fix_clang_tidy

Fix a couple clang-tidy warnings

15 months agoMerge pull request #15284 from masterleinad/fix_petsc_clang_tidy
Timo Heister [Wed, 31 May 2023 13:03:14 +0000 (09:03 -0400)]
Merge pull request #15284 from masterleinad/fix_petsc_clang_tidy

Use distinct names for PETSC call_and_possibly_capture_exception functions

15 months agoOnly use the Trilinos::all_libs target for Trilinos 14 and higher 15164/head
Daniel Arndt [Tue, 30 May 2023 17:22:16 +0000 (13:22 -0400)]
Only use the Trilinos::all_libs target for Trilinos 14 and higher

15 months agoProcess Trilinos targets, allowing Trilinos 14
Daniel Arndt [Tue, 30 May 2023 15:04:13 +0000 (11:04 -0400)]
Process Trilinos targets, allowing Trilinos 14

15 months agoRemove update_JxW_values for Piola transform
Maximilian Bergbauer [Wed, 31 May 2023 12:58:45 +0000 (14:58 +0200)]
Remove update_JxW_values for Piola transform

15 months agoRemove unused header file 15262/head
Daniel Arndt [Wed, 31 May 2023 12:55:56 +0000 (08:55 -0400)]
Remove unused header file

15 months agoChange logic to positive 15274/head
Maximilian Bergbauer [Wed, 31 May 2023 12:38:57 +0000 (14:38 +0200)]
Change logic to positive

15 months agoSuggestion from review
Maximilian Bergbauer [Wed, 31 May 2023 11:58:42 +0000 (13:58 +0200)]
Suggestion from review

15 months agoMerge pull request #15285 from masterleinad/fix_github_linux_ci
Marc Fehling [Tue, 30 May 2023 23:42:33 +0000 (17:42 -0600)]
Merge pull request #15285 from masterleinad/fix_github_linux_ci

Fix GitHub Linux CI

15 months agoOMPI allow run as root 15285/head
Marc Fehling [Tue, 30 May 2023 22:17:25 +0000 (16:17 -0600)]
OMPI allow run as root

15 months agoCheckout code
Daniel Arndt [Tue, 30 May 2023 21:09:21 +0000 (17:09 -0400)]
Checkout code

15 months agoRun as root user
Daniel Arndt [Tue, 30 May 2023 20:57:33 +0000 (16:57 -0400)]
Run as root user

Co-authored-by: Marc Fehling <mafehling.git@gmail.com>
15 months agoFix GitHub Linux CI
Daniel Arndt [Tue, 30 May 2023 20:20:36 +0000 (16:20 -0400)]
Fix GitHub Linux CI

15 months agoMerge pull request #15267 from bangerth/requires
David Wells [Tue, 30 May 2023 18:37:13 +0000 (14:37 -0400)]
Merge pull request #15267 from bangerth/requires

Add 'requires' clauses for matrix template arguments to PETSc TS and SNES solvers.

15 months agoUse distinct names for PETSC call_and_possibly_capture_exception functions 15284/head
Daniel Arndt [Tue, 30 May 2023 18:27:00 +0000 (14:27 -0400)]
Use distinct names for PETSC call_and_possibly_capture_exception functions

15 months agoFix a couple clang-tidy warnings 15282/head
Daniel Arndt [Tue, 30 May 2023 17:22:40 +0000 (13:22 -0400)]
Fix a couple clang-tidy warnings

15 months agoRemove init_cuda from matrix_free_device_initialize_vector
Daniel Arndt [Tue, 30 May 2023 13:46:53 +0000 (09:46 -0400)]
Remove init_cuda from matrix_free_device_initialize_vector

15 months agoMerge pull request #15264 from bangerth/doxygen
Luca Heltai [Sun, 28 May 2023 21:15:15 +0000 (23:15 +0200)]
Merge pull request #15264 from bangerth/doxygen

Suppress 'requires' clauses for doxygen if doxygen is too old.

15 months agoMerge pull request #15278 from pcafrica/docker_workflow
Luca Heltai [Sun, 28 May 2023 20:20:39 +0000 (22:20 +0200)]
Merge pull request #15278 from pcafrica/docker_workflow

Use dealii-dependencies Docker for GitHub workflow

15 months agoMerge pull request #15261 from jh66637/drop_inexact_kernels
Luca Heltai [Sun, 28 May 2023 20:17:58 +0000 (22:17 +0200)]
Merge pull request #15261 from jh66637/drop_inexact_kernels

remove inexact CGAL kernels and add test

15 months agoUse dealii-dependencies Docker image for "linux debug parallel simplex" job 15278/head
Pasquale Africa [Sat, 27 May 2023 17:44:11 +0000 (17:44 +0000)]
Use dealii-dependencies Docker image for "linux debug parallel simplex" job

15 months agoMerge pull request #15263 from bangerth/ida
Luca Heltai [Sun, 28 May 2023 07:01:19 +0000 (09:01 +0200)]
Merge pull request #15263 from bangerth/ida

Convert IDA to use the callback standard.

15 months agoMerge pull request #15271 from bangerth/petsc-snes
Luca Heltai [Sun, 28 May 2023 06:54:09 +0000 (08:54 +0200)]
Merge pull request #15271 from bangerth/petsc-snes

Convert PETSc SNES interfaces to use callback error conventions.

15 months agoMerge pull request #15269 from bangerth/petsc-ts
Luca Heltai [Sun, 28 May 2023 06:53:20 +0000 (08:53 +0200)]
Merge pull request #15269 from bangerth/petsc-ts

Make the PETSc TS interfaces conform to callback conventions.

15 months agoMerge pull request #14569 from peterrum/tensor_product_matrix_collection_fix_vectoriz...
Peter Munch [Sat, 27 May 2023 16:44:53 +0000 (18:44 +0200)]
Merge pull request #14569 from peterrum/tensor_product_matrix_collection_fix_vectorization

Tensor product matrix collection fix vectorization

15 months agoMerge pull request #15277 from marcfehling/fix-date-format
David Wells [Sat, 27 May 2023 15:23:09 +0000 (11:23 -0400)]
Merge pull request #15277 from marcfehling/fix-date-format

Fix data format in some changelogs.

15 months agoMerge pull request #14327 from peterrum/fdm_precompute_inverted_diagonal
Peter Munch [Sat, 27 May 2023 12:01:15 +0000 (14:01 +0200)]
Merge pull request #14327 from peterrum/fdm_precompute_inverted_diagonal

Precompute inverse diagonal (FDM)

15 months agoMerge pull request #15275 from masterleinad/fix_matrix_free_test_no_vectorization
Peter Munch [Sat, 27 May 2023 09:49:02 +0000 (11:49 +0200)]
Merge pull request #15275 from masterleinad/fix_matrix_free_test_no_vectorization

Fix some matrix_free tests without vectorization


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