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dealii.git
4 years agoMerge pull request #9640 from peterrum/step69-fixinclude
Martin Kronbichler [Mon, 9 Mar 2020 10:48:06 +0000 (11:48 +0100)]
Merge pull request #9640 from peterrum/step69-fixinclude

Step-69: add missing include cmath

4 years agoStep-69: add missing include cmath 9640/head
Peter Munch [Mon, 9 Mar 2020 06:32:09 +0000 (07:32 +0100)]
Step-69: add missing include cmath

4 years agoMerge pull request #9635 from drwells/clarify-manifolds-step-49
Wolfgang Bangerth [Mon, 9 Mar 2020 01:17:31 +0000 (02:17 +0100)]
Merge pull request #9635 from drwells/clarify-manifolds-step-49

Clarify some discussion on Manifolds in step-49.

4 years agoMerge pull request #9634 from peterrum/nonconti_warning_fix
Wolfgang Bangerth [Mon, 9 Mar 2020 01:16:04 +0000 (02:16 +0100)]
Merge pull request #9634 from peterrum/nonconti_warning_fix

Remove auto from test mpi_noncontiguous_partitioner_02.cc

4 years agoMerge pull request #9633 from peterrum/NoncontiguousPartitioner_default_constructor
Daniel Arndt [Sun, 8 Mar 2020 11:46:27 +0000 (07:46 -0400)]
Merge pull request #9633 from peterrum/NoncontiguousPartitioner_default_constructor

Add default constructor to NoncontiguousPartitioner

4 years agoAdd default constructor to NoncontiguousPartitioner 9633/head
Peter Munch [Sat, 7 Mar 2020 10:01:05 +0000 (11:01 +0100)]
Add default constructor to NoncontiguousPartitioner

4 years agoMerge pull request #9638 from drwells/improve-spelling-step-69
Matthias Maier [Sat, 7 Mar 2020 22:59:50 +0000 (16:59 -0600)]
Merge pull request #9638 from drwells/improve-spelling-step-69

step-69: improve spelling.

4 years agoMerge pull request #9637 from drwells/fix-variable-names-step-69
Matthias Maier [Sat, 7 Mar 2020 22:59:23 +0000 (16:59 -0600)]
Merge pull request #9637 from drwells/fix-variable-names-step-69

step-69: fix some timer variable names.

4 years agostep-69: improve spelling. 9638/head
David Wells [Sat, 7 Mar 2020 20:31:05 +0000 (15:31 -0500)]
step-69: improve spelling.

4 years agostep-69: fix some timer variable names. 9637/head
David Wells [Sat, 7 Mar 2020 20:28:12 +0000 (15:28 -0500)]
step-69: fix some timer variable names.

4 years agoClarify some discussion on Manifolds in step-49. 9635/head
David Wells [Sat, 7 Mar 2020 20:07:27 +0000 (15:07 -0500)]
Clarify some discussion on Manifolds in step-49.

4 years agoMerge pull request #8445 from tamiko/hydrodynamics_example_step
David Wells [Sat, 7 Mar 2020 20:01:27 +0000 (15:01 -0500)]
Merge pull request #8445 from tamiko/hydrodynamics_example_step

step-69: A first order hydrodynamics code for compressible Euler

4 years agofinal touches 8445/head
Matthias Maier [Thu, 5 Mar 2020 19:14:35 +0000 (13:14 -0600)]
final touches

4 years agode-generic-alize lambdas, use boost::make_iterator_range uniformly
Matthias Maier [Thu, 5 Mar 2020 18:47:55 +0000 (12:47 -0600)]
de-generic-alize lambdas, use boost::make_iterator_range uniformly

4 years agorename Scope object to scope
Matthias Maier [Thu, 5 Mar 2020 01:39:05 +0000 (19:39 -0600)]
rename Scope object to scope

4 years agoremove asynchronous IO mechanism
Matthias Maier [Thu, 5 Mar 2020 01:29:30 +0000 (19:29 -0600)]
remove asynchronous IO mechanism

4 years agoAddress some more review comments
Matthias Maier [Wed, 4 Mar 2020 20:35:50 +0000 (14:35 -0600)]
Address some more review comments

4 years agosimplify code
Matthias Maier [Wed, 4 Mar 2020 16:39:48 +0000 (10:39 -0600)]
simplify code

4 years agoAddress some more review comments
Matthias Maier [Wed, 26 Feb 2020 16:41:15 +0000 (10:41 -0600)]
Address some more review comments

4 years agoIntro added stuff addressing some comments.
Ignacio Tomas (-EXP) [Tue, 25 Feb 2020 08:33:27 +0000 (01:33 -0700)]
Intro added stuff addressing some comments.

4 years agoAddress some more review comments
Matthias Maier [Thu, 20 Feb 2020 08:00:57 +0000 (02:00 -0600)]
Address some more review comments

4 years agouse face_indices
Matthias Maier [Thu, 20 Feb 2020 07:34:30 +0000 (01:34 -0600)]
use face_indices

4 years agoaddress some more review comments
Matthias Maier [Wed, 19 Feb 2020 22:18:23 +0000 (16:18 -0600)]
address some more review comments

4 years agoadd a news/changes entry
Matthias Maier [Wed, 19 Feb 2020 23:27:15 +0000 (17:27 -0600)]
add a news/changes entry

4 years agoAlmost done
Ignacio Tomas (-EXP) [Sun, 16 Feb 2020 08:35:01 +0000 (01:35 -0700)]
Almost done

4 years agotry to work around an internal compiler error
Matthias Maier [Thu, 13 Feb 2020 20:42:02 +0000 (14:42 -0600)]
try to work around an internal compiler error

4 years agoadjust argument order of write_vtu_with_pvtu_record to latest changes
Matthias Maier [Thu, 20 Feb 2020 18:54:04 +0000 (12:54 -0600)]
adjust argument order of write_vtu_with_pvtu_record to latest changes

4 years agoIntro.dox almost done. Minor stuff pending in the cc file.
Ignacio Tomas (-EXP) [Fri, 14 Feb 2020 08:00:34 +0000 (01:00 -0700)]
Intro.dox almost done. Minor stuff pending in the cc file.

4 years agoaddress @bangerth's review comments
Matthias Maier [Thu, 13 Feb 2020 19:38:44 +0000 (13:38 -0600)]
address @bangerth's review comments

4 years agoMore polishing
Ignacio Tomas (-EXP) [Wed, 12 Feb 2020 23:36:44 +0000 (16:36 -0700)]
More polishing

4 years agoMinor modifications
Ignacio Tomas (-EXP) [Wed, 12 Feb 2020 02:08:39 +0000 (19:08 -0700)]
Minor modifications

4 years agoSandia affiliation header added in both files for legal reasons.
Ignacio Tomas (-EXP) [Thu, 6 Feb 2020 21:00:54 +0000 (14:00 -0700)]
Sandia affiliation header added in both files for legal reasons.

4 years agoMultiple code fixes: avoid C++17, fix compilation, remove whitespace
Matthias Maier [Tue, 4 Feb 2020 22:48:52 +0000 (16:48 -0600)]
Multiple code fixes: avoid C++17, fix compilation, remove whitespace

4 years agoupdate documentation, part XI
Matthias Maier [Tue, 4 Feb 2020 21:18:39 +0000 (15:18 -0600)]
update documentation, part XI

4 years agoupdate documentation, part X
Matthias Maier [Mon, 3 Feb 2020 21:02:22 +0000 (15:02 -0600)]
update documentation, part X

4 years agoupdate documentation, part IX
Ignacio Tomas (-EXP) [Mon, 3 Feb 2020 03:05:57 +0000 (20:05 -0700)]
update documentation, part IX

4 years agoupdate documentation, part VIII
Ignacio Tomas (-EXP) [Wed, 29 Jan 2020 06:52:13 +0000 (23:52 -0700)]
update documentation, part VIII

4 years agoupdate documentation, part VII
Ignacio Tomas (-EXP) [Sun, 19 Jan 2020 07:38:28 +0000 (00:38 -0700)]
update documentation, part VII

4 years agoupdate documentation, part VI
Matthias Maier [Sat, 18 Jan 2020 00:58:32 +0000 (18:58 -0600)]
update documentation, part VI

4 years agoupdate documentation, part V
Ignacio Tomas (-EXP) [Sat, 11 Jan 2020 00:52:50 +0000 (17:52 -0700)]
update documentation, part V

4 years agoupdate documentation, part IV
Matthias Maier [Fri, 3 Jan 2020 16:48:11 +0000 (10:48 -0600)]
update documentation, part IV

4 years agoupdate documentation, part III
Ignacio Tomas (-EXP) [Wed, 1 Jan 2020 02:47:25 +0000 (19:47 -0700)]
update documentation, part III

4 years agoLast line modified 1560
Ignacio Tomas (-EXP) [Wed, 1 Jan 2020 02:47:25 +0000 (19:47 -0700)]
Last line modified 1560

4 years agoAdding minor corrections everywhere
Ignacio Tomas (-EXP) [Tue, 31 Dec 2019 06:17:22 +0000 (23:17 -0700)]
Adding minor corrections everywhere

4 years agocode cleanup
Matthias Maier [Thu, 26 Dec 2019 20:14:34 +0000 (14:14 -0600)]
code cleanup

4 years agoupdate documentation, part II
Matthias Maier [Thu, 26 Dec 2019 15:31:40 +0000 (09:31 -0600)]
update documentation, part II

4 years agouse write_vtu_with_pvtu_record, code cleanup
Matthias Maier [Thu, 26 Dec 2019 15:24:01 +0000 (09:24 -0600)]
use write_vtu_with_pvtu_record, code cleanup

4 years agoreindent, layout changes, and address some review comments
Matthias Maier [Thu, 26 Dec 2019 14:41:19 +0000 (08:41 -0600)]
reindent, layout changes, and address some review comments

4 years agoUpdate documentation, part I
Ignacio Tomas (-EXP) [Mon, 9 Dec 2019 00:03:27 +0000 (17:03 -0700)]
Update documentation, part I

4 years agonothing
Ignacio Tomas (-EXP) [Mon, 9 Dec 2019 00:03:27 +0000 (17:03 -0700)]
nothing

4 years agoinitial commit
Matthias Maier [Thu, 5 Dec 2019 22:06:55 +0000 (16:06 -0600)]
initial commit

4 years agoRemove auto form test mpi_noncontiguous_partitioner_02.cc 9634/head
Peter Munch [Sat, 7 Mar 2020 16:12:20 +0000 (17:12 +0100)]
Remove auto form test mpi_noncontiguous_partitioner_02.cc

4 years agoMerge pull request #9610 from peterrum/ca_log
Martin Kronbichler [Sat, 7 Mar 2020 14:22:36 +0000 (15:22 +0100)]
Merge pull request #9610 from peterrum/ca_log

Add chang-log entry for ConsensusAlgorithm

4 years agoMerge pull request #9623 from peterrum/ca_namespace
Martin Kronbichler [Sat, 7 Mar 2020 14:21:48 +0000 (15:21 +0100)]
Merge pull request #9623 from peterrum/ca_namespace

Introduce ConsensusAlgorithms namespace

4 years agoAdd chang-log entry for ConsensusAlgorithm 9610/head
Peter Munch [Wed, 4 Mar 2020 06:44:07 +0000 (07:44 +0100)]
Add chang-log entry for ConsensusAlgorithm

4 years agoInroduce ConsensusAlgorithm namespace 9623/head
Peter Munch [Thu, 5 Mar 2020 09:56:18 +0000 (10:56 +0100)]
Inroduce ConsensusAlgorithm namespace

4 years agoMerge pull request #9607 from bangerth/active_cell_iterators
Martin Kronbichler [Fri, 6 Mar 2020 17:32:32 +0000 (18:32 +0100)]
Merge pull request #9607 from bangerth/active_cell_iterators

Convert a lot of places to range-based loops over all active cells.

4 years agoMerge pull request #9629 from bangerth/typos
Martin Kronbichler [Fri, 6 Mar 2020 17:31:41 +0000 (18:31 +0100)]
Merge pull request #9629 from bangerth/typos

Fix a typo.

4 years agoMerge pull request #9387 from peterrum/non-continuous-vector
Martin Kronbichler [Fri, 6 Mar 2020 17:24:14 +0000 (18:24 +0100)]
Merge pull request #9387 from peterrum/non-continuous-vector

Utilities::MPI::NoncontiguousPartitioner

4 years agoConvert a lot of places to range-based loops over all active cells. 9607/head
Wolfgang Bangerth [Tue, 3 Mar 2020 22:24:38 +0000 (15:24 -0700)]
Convert a lot of places to range-based loops over all active cells.

4 years agoFix a typo. 9629/head
Wolfgang Bangerth [Thu, 5 Mar 2020 23:28:42 +0000 (16:28 -0700)]
Fix a typo.

4 years agoMerge pull request #9630 from peterrum/ca_instantiation_fix
Martin Kronbichler [Fri, 6 Mar 2020 11:12:45 +0000 (12:12 +0100)]
Merge pull request #9630 from peterrum/ca_instantiation_fix

Instantiate all ConsensusAlgorithm components

4 years agoAdd Utilities::MPI::NoncontiguousPartitioner 9387/head
Peter Munch [Fri, 17 Jan 2020 16:32:49 +0000 (17:32 +0100)]
Add Utilities::MPI::NoncontiguousPartitioner

4 years agoMerge pull request #9624 from peterrum/ExcNeedsMPI
Martin Kronbichler [Fri, 6 Mar 2020 10:05:41 +0000 (11:05 +0100)]
Merge pull request #9624 from peterrum/ExcNeedsMPI

Introduce and use new ExcNeedsMPI

4 years agoInstantiate all ConsensusAlgorithm components 9630/head
Peter Munch [Fri, 6 Mar 2020 07:30:05 +0000 (08:30 +0100)]
Instantiate all ConsensusAlgorithm components

4 years agoIntoduce and use new ExcNeedsMPI 9624/head
Peter Munch [Thu, 5 Mar 2020 10:27:14 +0000 (11:27 +0100)]
Intoduce and use new ExcNeedsMPI

4 years agoMerge pull request #9585 from tjhei/use_global_cell_index_typedef
Wolfgang Bangerth [Fri, 6 Mar 2020 03:06:49 +0000 (04:06 +0100)]
Merge pull request #9585 from tjhei/use_global_cell_index_typedef

use global_cell_index in many places

4 years agoMerge pull request #9628 from bangerth/69
David Wells [Fri, 6 Mar 2020 02:25:39 +0000 (21:25 -0500)]
Merge pull request #9628 from bangerth/69

Reference step-69 in a couple of places.

4 years agoMerge pull request #9580 from MFraters/add_rank_2_tensor_orthogonalization_function
Wolfgang Bangerth [Thu, 5 Mar 2020 23:26:36 +0000 (00:26 +0100)]
Merge pull request #9580 from MFraters/add_rank_2_tensor_orthogonalization_function

Add rank 2 tensor orthogonalization function

4 years agoReference step-69 in a couple of places. 9628/head
Wolfgang Bangerth [Thu, 5 Mar 2020 23:23:27 +0000 (16:23 -0700)]
Reference step-69 in a couple of places.

4 years agoMerge pull request #9622 from bangerth/vertex_indices
Daniel Arndt [Thu, 5 Mar 2020 22:27:41 +0000 (17:27 -0500)]
Merge pull request #9622 from bangerth/vertex_indices

Introduce GeometryInfo::vertex_indices()

4 years agoMerge pull request #9614 from tjhei/cleanup_check_indentation.sh
David Wells [Thu, 5 Mar 2020 20:45:44 +0000 (15:45 -0500)]
Merge pull request #9614 from tjhei/cleanup_check_indentation.sh

cleanup and document check_indentation.sh

4 years agoMerge pull request #9625 from drwells/add-missing-boost-header
Wolfgang Bangerth [Thu, 5 Mar 2020 17:14:27 +0000 (18:14 +0100)]
Merge pull request #9625 from drwells/add-missing-boost-header

Add a missing boost header.

4 years agoAdd a missing boost header. 9625/head
David Wells [Thu, 5 Mar 2020 15:20:02 +0000 (10:20 -0500)]
Add a missing boost header.

4 years agoUse GeometryInfo::vertex_indices() in tests/. 9622/head
Wolfgang Bangerth [Thu, 5 Mar 2020 01:46:51 +0000 (18:46 -0700)]
Use GeometryInfo::vertex_indices() in tests/.

4 years agoMerge pull request #9616 from bangerth/active_cell_iterators-2
Martin Kronbichler [Thu, 5 Mar 2020 08:22:33 +0000 (09:22 +0100)]
Merge pull request #9616 from bangerth/active_cell_iterators-2

More active_cell_iterators().

4 years agoMerge pull request #9600 from peterrum/ca_move_to_new_file
Martin Kronbichler [Thu, 5 Mar 2020 08:11:49 +0000 (09:11 +0100)]
Merge pull request #9600 from peterrum/ca_move_to_new_file

Move ConsensusAlgorithm related functions to mpi_consensus_algorithm.h

4 years agoUse GeometryInfo::vertex_indices() in include/ and source/.
Wolfgang Bangerth [Thu, 5 Mar 2020 01:46:38 +0000 (18:46 -0700)]
Use GeometryInfo::vertex_indices() in include/ and source/.

4 years agoAdd a changelog entry.
Wolfgang Bangerth [Wed, 4 Mar 2020 22:30:44 +0000 (15:30 -0700)]
Add a changelog entry.

4 years agoAdd GeometryInfo::vertex_indices().
Wolfgang Bangerth [Wed, 4 Mar 2020 22:29:17 +0000 (15:29 -0700)]
Add GeometryInfo::vertex_indices().

4 years agoMerge pull request #9619 from bangerth/warnings
Daniel Arndt [Thu, 5 Mar 2020 04:27:40 +0000 (23:27 -0500)]
Merge pull request #9619 from bangerth/warnings

Avoid a bunch of warnings in release mode.

4 years agoMerge pull request #9615 from tjhei/cleanup_shell_scripts
David Wells [Thu, 5 Mar 2020 02:38:17 +0000 (21:38 -0500)]
Merge pull request #9615 from tjhei/cleanup_shell_scripts

shell script: fix some shellcheck warnings

4 years agoFix tester: remove constant expression. 9580/head
Menno Fraters [Tue, 3 Mar 2020 04:32:33 +0000 (20:32 -0800)]
Fix tester: remove constant expression.

4 years agoAvoid a bunch of warnings in release mode. 9619/head
Wolfgang Bangerth [Wed, 4 Mar 2020 17:50:52 +0000 (10:50 -0700)]
Avoid a bunch of warnings in release mode.

4 years agoMove ConsensusAlgorithm related functions to mpi_consensus_algorithm.h 9600/head
Peter Munch [Tue, 3 Mar 2020 10:10:10 +0000 (11:10 +0100)]
Move ConsensusAlgorithm related functions to mpi_consensus_algorithm.h

4 years agoexpand testing
Menno Fraters [Fri, 28 Feb 2020 23:50:57 +0000 (15:50 -0800)]
expand testing

4 years agoadress Wolfgangs comments.
Menno Fraters [Fri, 28 Feb 2020 22:42:40 +0000 (14:42 -0800)]
adress Wolfgangs comments.

4 years agoMore active_cell_iterators(). 9616/head
Wolfgang Bangerth [Wed, 4 Mar 2020 15:54:47 +0000 (08:54 -0700)]
More active_cell_iterators().

4 years agoaddress comments 9585/head
Timo Heister [Mon, 2 Mar 2020 01:57:45 +0000 (20:57 -0500)]
address comments

4 years agouse global_cell_index in many places
Timo Heister [Sun, 1 Mar 2020 19:58:34 +0000 (14:58 -0500)]
use global_cell_index in many places

4 years agoMerge pull request #9586 from bangerth/global_cell_index
Timo Heister [Wed, 4 Mar 2020 15:53:21 +0000 (10:53 -0500)]
Merge pull request #9586 from bangerth/global_cell_index

Introduce types::global_cell_index.

4 years agoshell script: fix some shellcheck warnings 9615/head
Timo Heister [Wed, 4 Mar 2020 15:50:54 +0000 (10:50 -0500)]
shell script: fix some shellcheck warnings

4 years agocleanup and document check_indentation.sh 9614/head
Timo Heister [Wed, 4 Mar 2020 15:37:01 +0000 (10:37 -0500)]
cleanup and document check_indentation.sh

4 years agoMerge pull request #9612 from tjhei/fix_check_doxygen_script
Daniel Arndt [Wed, 4 Mar 2020 13:37:09 +0000 (08:37 -0500)]
Merge pull request #9612 from tjhei/fix_check_doxygen_script

CI: fix check_indentation.sh script

4 years agoCI: fix check_indentation.sh script 9612/head
Timo Heister [Wed, 4 Mar 2020 13:16:24 +0000 (08:16 -0500)]
CI: fix check_indentation.sh script

Due to the addition of check_doxygen.sh we were not checking the return
value of git diff. This means the travis check would pass even though
there was a diff.

4 years agoMerge pull request #9611 from peterrum/fix_indent
Martin Kronbichler [Wed, 4 Mar 2020 11:07:48 +0000 (12:07 +0100)]
Merge pull request #9611 from peterrum/fix_indent

[URGENT] Fix indentation in step-8

4 years agoFix indentation in step-8 9611/head
Peter Munch [Wed, 4 Mar 2020 10:04:05 +0000 (11:04 +0100)]
Fix indentation in step-8

4 years agoMerge pull request #9584 from tjhei/ci_jenkins_set_ex
Daniel Arndt [Wed, 4 Mar 2020 03:41:45 +0000 (22:41 -0500)]
Merge pull request #9584 from tjhei/ci_jenkins_set_ex

CI: Jenkins: set -x and set -e

4 years agoMerge pull request #9602 from kronbichler/fix_fe_eval_constraints
Timo Heister [Wed, 4 Mar 2020 03:07:22 +0000 (22:07 -0500)]
Merge pull request #9602 from kronbichler/fix_fe_eval_constraints

Fix bug in FEEvaluation for constraints in face integrals

4 years agoMerge pull request #9601 from bangerth/8
Timo Heister [Wed, 4 Mar 2020 03:04:45 +0000 (22:04 -0500)]
Merge pull request #9601 from bangerth/8

Augment the introduction of step-8.


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