]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
5 years agoUpdate Trilinos version. 8138/head
Matthias Maier [Mon, 13 May 2019 14:53:35 +0000 (09:53 -0500)]
Update Trilinos version.

5 years agoMerge pull request #8133 from bangerth/fix
Martin Kronbichler [Mon, 13 May 2019 09:26:37 +0000 (11:26 +0200)]
Merge pull request #8133 from bangerth/fix

Fix a couple of comments.

5 years agoFix a couple of comments. 8133/head
Wolfgang Bangerth [Mon, 13 May 2019 09:18:37 +0000 (03:18 -0600)]
Fix a couple of comments.

5 years agoMerge pull request #8130 from bangerth/fixup
Martin Kronbichler [Mon, 13 May 2019 09:00:38 +0000 (11:00 +0200)]
Merge pull request #8130 from bangerth/fixup

Fix the two comments from #8127.

5 years agoMerge pull request #8129 from bangerth/table
Martin Kronbichler [Mon, 13 May 2019 08:59:51 +0000 (10:59 +0200)]
Merge pull request #8129 from bangerth/table

Provide a much nicer way to format a table in step-56.

5 years agoFix the two comments from #8127. 8130/head
Wolfgang Bangerth [Mon, 13 May 2019 08:54:34 +0000 (02:54 -0600)]
Fix the two comments from #8127.

5 years agoProvide a much nicer way to format a table in step-56. 8129/head
Wolfgang Bangerth [Mon, 13 May 2019 08:50:57 +0000 (02:50 -0600)]
Provide a much nicer way to format a table in step-56.

5 years agoMerge pull request #8127 from tjhei/wrap_comment_warnings
Wolfgang Bangerth [Mon, 13 May 2019 08:47:07 +0000 (02:47 -0600)]
Merge pull request #8127 from tjhei/wrap_comment_warnings

release: wrap_comment warnings

5 years agoMerge pull request #8123 from drwells/improve-plural
Wolfgang Bangerth [Mon, 13 May 2019 08:43:47 +0000 (02:43 -0600)]
Merge pull request #8123 from drwells/improve-plural

Use 'Tensor objects' instead of 'Tensors'.

5 years agoMerge branch 'master' into wrap_comment_warnings 8127/head
Wolfgang Bangerth [Mon, 13 May 2019 08:41:54 +0000 (02:41 -0600)]
Merge branch 'master' into wrap_comment_warnings

5 years agoMerge pull request #8012 from Rombur/cuda_tutorial
Martin Kronbichler [Mon, 13 May 2019 08:26:10 +0000 (10:26 +0200)]
Merge pull request #8012 from Rombur/cuda_tutorial

Step-64 : matrix-free CUDA

5 years agoMerge pull request #8124 from masterleinad/fix_codespell_findings
Martin Kronbichler [Mon, 13 May 2019 05:48:18 +0000 (07:48 +0200)]
Merge pull request #8124 from masterleinad/fix_codespell_findings

Fix codespell findings

5 years agoa few more
Timo Heister [Mon, 13 May 2019 04:41:35 +0000 (22:41 -0600)]
a few more

5 years agorelease: wrap_comment warnings
Timo Heister [Mon, 13 May 2019 04:17:50 +0000 (22:17 -0600)]
release: wrap_comment warnings

Not all of them here might be crictical, but some are clearly bugs
(@name). In general, if @ref is not in a single line, doxygen sometimes
(not always) fails to create the correct link.
The line breaks in differentation/ are likely going to fix some of the
doxygen complaints about missing links.

5 years agoMerge pull request #8033 from jppelteret/sd-scalar_tensor_operations_01
Daniel Arndt [Mon, 13 May 2019 02:56:09 +0000 (22:56 -0400)]
Merge pull request #8033 from jppelteret/sd-scalar_tensor_operations_01

SD scalar and tensor operations: Substitution and evaluation

5 years agoFix codespell findings 8124/head
Daniel Arndt [Mon, 13 May 2019 01:50:27 +0000 (21:50 -0400)]
Fix codespell findings

5 years agoUse 'Tensor objects' instead of 'Tensors'. 8123/head
David Wells [Mon, 13 May 2019 00:55:18 +0000 (20:55 -0400)]
Use 'Tensor objects' instead of 'Tensors'.

This fixes doxygen links

5 years agoImprove documentation of SD tensor operations 8033/head
Jean-Paul Pelteret [Sun, 12 May 2019 23:51:09 +0000 (01:51 +0200)]
Improve documentation of SD tensor operations

Co-Authored-By: Daniel Arndt <arndtd@ornl.gov>
5 years agoImprove documentation of SD scalar operations
Jean-Paul Pelteret [Sun, 12 May 2019 23:44:18 +0000 (01:44 +0200)]
Improve documentation of SD scalar operations

Co-Authored-By: Daniel Arndt <arndtd@ornl.gov>
5 years agoMerge pull request #8121 from jppelteret/sd-doc_02
David Wells [Sun, 12 May 2019 23:37:51 +0000 (19:37 -0400)]
Merge pull request #8121 from jppelteret/sd-doc_02

Super small doc fixes for SD math functions

5 years agoTidy up some grammar used to describe SD math functions 8121/head
Jean-Paul Pelteret [Sun, 12 May 2019 23:28:22 +0000 (01:28 +0200)]
Tidy up some grammar used to describe SD math functions

5 years agoCorrect an incomplete latex command in math mode
Jean-Paul Pelteret [Sun, 12 May 2019 23:28:06 +0000 (01:28 +0200)]
Correct an incomplete latex command in math mode

5 years agoMerge pull request #8120 from jppelteret/sd-doc_01
Jean-Paul Pelteret [Sun, 12 May 2019 23:18:43 +0000 (01:18 +0200)]
Merge pull request #8120 from jppelteret/sd-doc_01

Add documentation module for symbolic differentiation

5 years agoFix some spelling errors in documentation of AD module 8120/head
Jean-Paul Pelteret [Sun, 12 May 2019 22:22:26 +0000 (00:22 +0200)]
Fix some spelling errors in documentation of AD module

5 years agoAdd documentation module for symbolic differentiation
Jean-Paul Pelteret [Fri, 10 May 2019 17:58:20 +0000 (19:58 +0200)]
Add documentation module for symbolic differentiation

5 years agoMerge pull request #8117 from drwells/fix-uninitialized-warning
David Wells [Sun, 12 May 2019 22:11:12 +0000 (18:11 -0400)]
Merge pull request #8117 from drwells/fix-uninitialized-warning

Fix a clang warning about an uninitialized read.

5 years agoMerge pull request #8115 from tjhei/doxygen_fixes3
Matthias Maier [Sun, 12 May 2019 21:49:36 +0000 (16:49 -0500)]
Merge pull request #8115 from tjhei/doxygen_fixes3

doxygen fixes

5 years agoMerge pull request #8116 from tjhei/doxygen_fixes4
Matthias Maier [Sun, 12 May 2019 21:46:20 +0000 (16:46 -0500)]
Merge pull request #8116 from tjhei/doxygen_fixes4

fix tables in tutorials

5 years agoMerge pull request #8119 from drwells/double-word-typos
Jean-Paul Pelteret [Sun, 12 May 2019 20:40:55 +0000 (22:40 +0200)]
Merge pull request #8119 from drwells/double-word-typos

Fix some double-word typos.

5 years agoFix some double-word typos. 8119/head
David Wells [Sun, 12 May 2019 19:53:16 +0000 (15:53 -0400)]
Fix some double-word typos.

e.g., "the the".

5 years agoRename some internal functions
Jean-Paul Pelteret [Sat, 11 May 2019 18:04:52 +0000 (20:04 +0200)]
Rename some internal functions

5 years agoAdd further documentation on template parameters
Jean-Paul Pelteret [Sat, 11 May 2019 17:59:28 +0000 (19:59 +0200)]
Add further documentation on template parameters

5 years agoAdd a changelog entry
Jean-Paul Pelteret [Tue, 7 May 2019 20:03:36 +0000 (22:03 +0200)]
Add a changelog entry

5 years agoAdd test for SD tensor substitution and evaluation
Jean-Paul Pelteret [Tue, 7 May 2019 20:01:02 +0000 (22:01 +0200)]
Add test for SD tensor substitution and evaluation

5 years agoAdd test for SD scalar substitution and evaluation
Jean-Paul Pelteret [Tue, 7 May 2019 20:00:42 +0000 (22:00 +0200)]
Add test for SD scalar substitution and evaluation

5 years agoAdd specialisation for rank-0 Tensor functions
Jean-Paul Pelteret [Tue, 7 May 2019 19:47:01 +0000 (21:47 +0200)]
Add specialisation for rank-0 Tensor functions

- Differentiation::SD::tensor_substitution_map()
- Differentiation::SD::tensor_substitute()
- Differentiation::SD::tensor_substitute_evaluate()

5 years agoMove definition of a template function to the header file
Jean-Paul Pelteret [Tue, 7 May 2019 19:45:51 +0000 (21:45 +0200)]
Move definition of a template function to the header file

5 years agoImplement substitution and evaluation for SD tensors
Jean-Paul Pelteret [Tue, 7 May 2019 16:34:19 +0000 (18:34 +0200)]
Implement substitution and evaluation for SD tensors

5 years agoImplement substitution and evaluation for SD scalar types
Jean-Paul Pelteret [Tue, 7 May 2019 16:34:01 +0000 (18:34 +0200)]
Implement substitution and evaluation for SD scalar types

5 years agoMerge pull request #8118 from drwells/add-newline
Jean-Paul Pelteret [Sun, 12 May 2019 19:18:51 +0000 (21:18 +0200)]
Merge pull request #8118 from drwells/add-newline

Add a missing newline.

5 years agoFix use of class name FEFaceFvalues in ScratchData documentation 8115/head
Jean-Paul Pelteret [Sun, 12 May 2019 19:05:12 +0000 (21:05 +0200)]
Fix use of class name FEFaceFvalues in ScratchData documentation

5 years agoFix some doxygen parameters
Jean-Paul Pelteret [Sun, 12 May 2019 19:04:24 +0000 (21:04 +0200)]
Fix some doxygen parameters

5 years agoMerge pull request #8107 from tamiko/for_auto_cell
Matthias Maier [Sun, 12 May 2019 18:56:18 +0000 (13:56 -0500)]
Merge pull request #8107 from tamiko/for_auto_cell

use auto & cell instead of auto cell

5 years agoAdd a missing newline. 8118/head
David Wells [Sun, 12 May 2019 18:55:43 +0000 (14:55 -0400)]
Add a missing newline.

5 years agoMerge pull request #8085 from bangerth/can
Matthias Maier [Sun, 12 May 2019 18:37:35 +0000 (13:37 -0500)]
Merge pull request #8085 from bangerth/can

Run setting canonical pages as part of the doxygen generation process.

5 years agoFix a clang warning about an uninitialized read. 8117/head
David Wells [Sun, 12 May 2019 18:33:30 +0000 (14:33 -0400)]
Fix a clang warning about an uninitialized read.

5 years agoteach clang format not to break section in tutorials
Timo Heister [Sun, 12 May 2019 18:10:45 +0000 (12:10 -0600)]
teach clang format not to break section in tutorials

5 years agofix indentation
Timo Heister [Sun, 12 May 2019 18:07:12 +0000 (12:07 -0600)]
fix indentation

5 years agofix tables in tutorials 8116/head
Timo Heister [Sun, 12 May 2019 18:04:17 +0000 (12:04 -0600)]
fix tables in tutorials

it turns out doxygen breaks the formatting if you have empty lines
within a table (check
https://www.dealii.org/developer/doxygen/deal.II/step_56.html#TimingResults
for an example)

5 years agomore fixes
Timo Heister [Sun, 12 May 2019 17:44:50 +0000 (11:44 -0600)]
more fixes

5 years agofix doxygen problems
Timo Heister [Sun, 12 May 2019 17:37:47 +0000 (11:37 -0600)]
fix doxygen problems

5 years agoMerge pull request #8072 from marcfehling/future-fe
Martin Kronbichler [Sun, 12 May 2019 17:21:14 +0000 (19:21 +0200)]
Merge pull request #8072 from marcfehling/future-fe

 Introduced future finite element indices.

5 years agoMerge pull request #8112 from masterleinad/revert_pr_8111
Martin Kronbichler [Sun, 12 May 2019 17:20:49 +0000 (19:20 +0200)]
Merge pull request #8112 from masterleinad/revert_pr_8111

Revert #8082

5 years agoRevert #8082 8112/head
Daniel Arndt [Sun, 12 May 2019 16:17:28 +0000 (18:17 +0200)]
Revert #8082

This reverts commit f6c96c520478d963cd9ebb6f4877d59e3ddb8b01.

5 years agoMerge pull request #8101 from kronbichler/modernize-step-17
Matthias Maier [Sun, 12 May 2019 15:46:31 +0000 (10:46 -0500)]
Merge pull request #8101 from kronbichler/modernize-step-17

Modernize step-17

5 years agoMerge pull request #8102 from tamiko/modernize_step_6
Matthias Maier [Sun, 12 May 2019 15:43:55 +0000 (10:43 -0500)]
Merge pull request #8102 from tamiko/modernize_step_6

modernize step 6

5 years agofix up dox files 8107/head
Matthias Maier [Sun, 12 May 2019 15:36:13 +0000 (10:36 -0500)]
fix up dox files

5 years agocontrib: favor auto & cell
Matthias Maier [Sun, 12 May 2019 04:19:24 +0000 (23:19 -0500)]
contrib: favor auto & cell

5 years agotests: favor auto & cell
Matthias Maier [Sun, 12 May 2019 04:18:48 +0000 (23:18 -0500)]
tests: favor auto & cell

5 years agoexamples: favor auto & cell
Matthias Maier [Sun, 12 May 2019 04:18:32 +0000 (23:18 -0500)]
examples: favor auto & cell

5 years agosource: favor auto & cell
Matthias Maier [Sun, 12 May 2019 04:18:13 +0000 (23:18 -0500)]
source: favor auto & cell

5 years agoinclude: favor auto & cell
Matthias Maier [Sun, 12 May 2019 04:17:55 +0000 (23:17 -0500)]
include: favor auto & cell

5 years agofix typos 8102/head
Matthias Maier [Sun, 12 May 2019 15:27:15 +0000 (10:27 -0500)]
fix typos

5 years agochange value to reference
Matthias Maier [Sat, 11 May 2019 22:32:00 +0000 (17:32 -0500)]
change value to reference

5 years agoimprove readability of assembly routine
Matthias Maier [Sat, 11 May 2019 21:08:41 +0000 (16:08 -0500)]
improve readability of assembly routine

5 years agouse range-based for loop
Matthias Maier [Sat, 11 May 2019 21:01:08 +0000 (16:01 -0500)]
use range-based for loop

5 years agoMerge pull request #8086 from drwells/fix-python-compatibility
Matthias Maier [Sun, 12 May 2019 15:25:29 +0000 (10:25 -0500)]
Merge pull request #8086 from drwells/fix-python-compatibility

Fix python compatibility

5 years agoIntroduced future finite element indices. 8072/head
Marc Fehling [Thu, 11 Apr 2019 14:18:42 +0000 (16:18 +0200)]
Introduced future finite element indices.

5 years agoMerge pull request #8110 from jppelteret/modernise_step_44-02
Martin Kronbichler [Sun, 12 May 2019 11:24:21 +0000 (13:24 +0200)]
Merge pull request #8110 from jppelteret/modernise_step_44-02

Modernise step-44 (part 2)

5 years agoRemove an unnecessary class destructor 8110/head
Jean-Paul Pelteret [Sun, 12 May 2019 11:02:21 +0000 (13:02 +0200)]
Remove an unnecessary class destructor

5 years agoMerge pull request #8092 from kronbichler/comment_dof_handler_policy_change
Martin Kronbichler [Sun, 12 May 2019 10:28:38 +0000 (12:28 +0200)]
Merge pull request #8092 from kronbichler/comment_dof_handler_policy_change

Add comments to DoFHandlerPolicy changes

5 years agoMerge pull request #8109 from kronbichler/fix_step-55
Martin Kronbichler [Sun, 12 May 2019 08:02:04 +0000 (10:02 +0200)]
Merge pull request #8109 from kronbichler/fix_step-55

Make step-55 compile again

5 years agoMake step-55 compile again 8109/head
Martin Kronbichler [Sun, 12 May 2019 07:45:35 +0000 (09:45 +0200)]
Make step-55 compile again

5 years agoMerge pull request #8103 from jppelteret/sd-template_params_01
Martin Kronbichler [Sun, 12 May 2019 06:02:40 +0000 (08:02 +0200)]
Merge pull request #8103 from jppelteret/sd-template_params_01

SD: Better document and homogenise naming of template parameters

5 years agoMerge pull request #8105 from masterleinad/modernize_step-55
Martin Kronbichler [Sun, 12 May 2019 06:01:13 +0000 (08:01 +0200)]
Merge pull request #8105 from masterleinad/modernize_step-55

Modernize/Fix step-55

5 years agoMerge pull request #8095 from jppelteret/modernise_step_44
Martin Kronbichler [Sun, 12 May 2019 06:00:54 +0000 (08:00 +0200)]
Merge pull request #8095 from jppelteret/modernise_step_44

Modernise step-44

5 years agoMerge pull request #8097 from masterleinad/modernize_step_42
Martin Kronbichler [Sun, 12 May 2019 06:00:36 +0000 (08:00 +0200)]
Merge pull request #8097 from masterleinad/modernize_step_42

Modernize step-42

5 years agoMerge pull request #8100 from drwells/update-step-34-38-41
Martin Kronbichler [Sun, 12 May 2019 06:00:15 +0000 (08:00 +0200)]
Merge pull request #8100 from drwells/update-step-34-38-41

Update step 34 38 41

5 years agoMerge pull request #8094 from masterleinad/modernize_step_46
Martin Kronbichler [Sun, 12 May 2019 05:59:57 +0000 (07:59 +0200)]
Merge pull request #8094 from masterleinad/modernize_step_46

Modernize step-46

5 years agoMerge pull request #8106 from masterleinad/modernize_step-33
Martin Kronbichler [Sun, 12 May 2019 05:52:07 +0000 (07:52 +0200)]
Merge pull request #8106 from masterleinad/modernize_step-33

Modernize step-33

5 years agoMerge pull request #8108 from masterleinad/restrict_meshworker_tests
Martin Kronbichler [Sun, 12 May 2019 05:36:01 +0000 (07:36 +0200)]
Merge pull request #8108 from masterleinad/restrict_meshworker_tests

Restrict MeshWorker tests

5 years agoMerge pull request #8099 from masterleinad/modernize_step-26
Martin Kronbichler [Sun, 12 May 2019 05:29:29 +0000 (07:29 +0200)]
Merge pull request #8099 from masterleinad/modernize_step-26

Modernize step-26

5 years agoRestrict meshworker tests 8108/head
Daniel Arndt [Sun, 12 May 2019 05:17:38 +0000 (07:17 +0200)]
Restrict meshworker tests

5 years agoModernize step-33 8106/head
Daniel Arndt [Sun, 12 May 2019 03:03:39 +0000 (05:03 +0200)]
Modernize step-33

5 years agostep-41: C++ modernization. 8100/head
David Wells [Sat, 11 May 2019 18:14:53 +0000 (14:14 -0400)]
step-41: C++ modernization.

1. Avoid including <list> (we don't use it)
2. Inline function definitions
3. Use ranged-for loops

5 years agostep-38: update results.
David Wells [Sat, 11 May 2019 18:09:41 +0000 (14:09 -0400)]
step-38: update results.

5 years agostep-38: delete trailing whitespace.
David Wells [Sat, 11 May 2019 18:09:23 +0000 (14:09 -0400)]
step-38: delete trailing whitespace.

5 years agostep-38: C++ modernization.
David Wells [Sat, 11 May 2019 18:06:49 +0000 (14:06 -0400)]
step-38: C++ modernization.

1. Fix the order of the headers.
2. Fix some doxygen links and add '()' to functions.
3. Use ranged-for loops.

5 years agostep-34: update output.
David Wells [Sat, 11 May 2019 18:05:29 +0000 (14:05 -0400)]
step-34: update output.

5 years agostep-34: C++ modernization.
David Wells [Sat, 11 May 2019 17:19:20 +0000 (13:19 -0400)]
step-34: C++ modernization.

1. Use dof_handler instead of dh to match the other tutorial programs.
2. Use std::to_string
3. Avoid using deprecated features (e.g., update_cell_normal_vectors)
4. Ranged-for loops
5. Remove a circular builds-on dependency with step-38

5 years agoMerge pull request #8096 from masterleinad/modernize_step_43
Daniel Arndt [Sun, 12 May 2019 02:36:24 +0000 (22:36 -0400)]
Merge pull request #8096 from masterleinad/modernize_step_43

Modernize step 43

5 years agoModernize/Fix step-55 8105/head
Daniel Arndt [Sun, 12 May 2019 02:02:51 +0000 (22:02 -0400)]
Modernize/Fix step-55

5 years agoMerge pull request #8104 from jppelteret/fix_changelog_01
David Wells [Sat, 11 May 2019 22:55:35 +0000 (18:55 -0400)]
Merge pull request #8104 from jppelteret/fix_changelog_01

Fix a changelog entry

5 years agoMerge pull request #8093 from masterleinad/fix_warnings_step_62
Jean-Paul Pelteret [Sat, 11 May 2019 22:52:12 +0000 (00:52 +0200)]
Merge pull request #8093 from masterleinad/fix_warnings_step_62

Fix warnings in step-62

5 years agoFix a changelog entry 8104/head
Jean-Paul Pelteret [Sat, 11 May 2019 21:36:23 +0000 (23:36 +0200)]
Fix a changelog entry

5 years agoMerge pull request #8090 from kronbichler/step-31-fix
Jean-Paul Pelteret [Sat, 11 May 2019 21:07:41 +0000 (23:07 +0200)]
Merge pull request #8090 from kronbichler/step-31-fix

step-31: Fix compilation with clang

5 years agoModernize step-17 8101/head
Martin Kronbichler [Sat, 11 May 2019 20:20:35 +0000 (22:20 +0200)]
Modernize step-17

5 years agoDocument some template parameters of SD functions for tensors 8103/head
Jean-Paul Pelteret [Sat, 11 May 2019 20:18:35 +0000 (22:18 +0200)]
Document some template parameters of SD functions for tensors

5 years agoDocument some template parameters of SD functions for scalars
Jean-Paul Pelteret [Sat, 11 May 2019 20:18:20 +0000 (22:18 +0200)]
Document some template parameters of SD functions for scalars

5 years agoAdd ExpressionType template parameter to tensor make_substitution_map()
Jean-Paul Pelteret [Sat, 11 May 2019 19:54:33 +0000 (21:54 +0200)]
Add ExpressionType template parameter to tensor make_substitution_map()


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