]> https://gitweb.dealii.org/ - candi.git/log
candi.git
15 months agofix checksum dealii-9.4
Timo Heister [Mon, 8 May 2023 13:43:58 +0000 (09:43 -0400)]
fix checksum

16 months agoupdate slepc
Timo Heister [Sat, 22 Apr 2023 14:46:32 +0000 (10:46 -0400)]
update slepc

16 months agoPETSc update to 3.19.0 to support M1
Timo Heister [Thu, 6 Apr 2023 17:25:39 +0000 (13:25 -0400)]
PETSc update to 3.19.0 to support M1

16 months agoswitch to python3 by default
Timo Heister [Thu, 20 Apr 2023 01:32:20 +0000 (21:32 -0400)]
switch to python3 by default

17 months agosupport trilinos and netcdf on M1
Timo Heister [Thu, 6 Apr 2023 17:24:28 +0000 (13:24 -0400)]
support trilinos and netcdf on M1

17 months agohdf5: bump to support M1
Timo Heister [Thu, 6 Apr 2023 17:27:46 +0000 (13:27 -0400)]
hdf5: bump to support M1

17 months agoMerge pull request #337 from drwells/unset-petsc-arch
Timo Heister [Mon, 17 Apr 2023 19:55:23 +0000 (15:55 -0400)]
Merge pull request #337 from drwells/unset-petsc-arch

Correctly unset PETSc environment variables.

17 months agoCorrectly unset PETSc environment variables. 337/head
David Wells [Tue, 28 Mar 2023 20:30:47 +0000 (16:30 -0400)]
Correctly unset PETSc environment variables.

19 months agoversion 9.4.2-r3 v9.4.2-r3
Timo Heister [Wed, 15 Feb 2023 13:58:45 +0000 (08:58 -0500)]
version 9.4.2-r3

19 months agodisable x11
Timo Heister [Tue, 14 Feb 2023 02:25:53 +0000 (21:25 -0500)]
disable x11

19 months agotrilinos without explicit instantiations
Timo Heister [Mon, 13 Feb 2023 23:12:36 +0000 (18:12 -0500)]
trilinos without explicit instantiations

It turns out explicit instantiations have the following problems:
- it confuses linkers like gold leading to missing instantiations
- breaks compilation on OSX ARM (symbols with wrong arch)
- it is likely related to a big bloat in library size

Disable them for now...

19 months agoversion 9.4.2-r2 v9.4.2-r2
Timo Heister [Thu, 9 Feb 2023 21:12:09 +0000 (16:12 -0500)]
version 9.4.2-r2

19 months agoCI: osx use gcc-11 to fix compilation
Timo Heister [Wed, 8 Feb 2023 01:17:49 +0000 (20:17 -0500)]
CI: osx use gcc-11 to fix compilation

test

a

a

f

19 months agoMerge pull request #324 from tjhei/test2204-9.4
Timo Heister [Wed, 8 Feb 2023 01:16:27 +0000 (20:16 -0500)]
Merge pull request #324 from tjhei/test2204-9.4

[CI] test 22.04 for 9.4

19 months agotest 22.04 324/head
Timo Heister [Mon, 6 Feb 2023 22:54:24 +0000 (17:54 -0500)]
test 22.04

19 months agoMerge pull request #313 from Wendi-L/openblast-fix
Timo Heister [Tue, 7 Feb 2023 00:21:33 +0000 (19:21 -0500)]
Merge pull request #313 from Wendi-L/openblast-fix

fix issue on undefined reference to gotoblas

19 months agonicer name for hdf5 config file
Timo Heister [Mon, 6 Feb 2023 22:39:27 +0000 (17:39 -0500)]
nicer name for hdf5 config file

19 months agoversion 9.4.2-r1 v9.4.2-r1
Timo Heister [Mon, 6 Feb 2023 22:36:00 +0000 (17:36 -0500)]
version 9.4.2-r1

19 months agodeal.II v9.4.2
Timo Heister [Mon, 6 Feb 2023 22:35:52 +0000 (17:35 -0500)]
deal.II v9.4.2

19 months agofix SEACAS support
Timo Heister [Mon, 6 Feb 2023 20:07:49 +0000 (15:07 -0500)]
fix SEACAS support

- netcdf support in trilinos needs some help to find correct paths
- SEACAS depends on netcdf

19 months agoMerge pull request #318 from rossisimone/patch-2
Timo Heister [Fri, 3 Feb 2023 19:42:04 +0000 (14:42 -0500)]
Merge pull request #318 from rossisimone/patch-2

Enable SEACAS in Trilinos to enable exodusII

19 months agoMerge pull request #312 from Wendi-L/parmetis-64
Timo Heister [Tue, 31 Jan 2023 16:04:52 +0000 (11:04 -0500)]
Merge pull request #312 from Wendi-L/parmetis-64

fix bug on metis installation when USE_64_BIT_INDICES=ON

19 months agoEnable SEACAS in Trilinos to enable exodusII 318/head
rossisimone [Sat, 28 Jan 2023 12:09:16 +0000 (07:09 -0500)]
Enable SEACAS in Trilinos to enable exodusII

19 months agomove patch into file 312/head
Timo Heister [Thu, 26 Jan 2023 01:52:42 +0000 (20:52 -0500)]
move patch into file

21 months agoversion 9.4.1-r1 v9.4.1-r1
Timo Heister [Sun, 4 Dec 2022 00:38:24 +0000 (19:38 -0500)]
version 9.4.1-r1

21 months agodeal.II 9.4.1
Timo Heister [Sun, 4 Dec 2022 00:38:16 +0000 (19:38 -0500)]
deal.II 9.4.1

21 months agofix issue on undefined reference to gotoblas 313/head
Wendi-L [Sat, 3 Dec 2022 16:12:07 +0000 (16:12 +0000)]
fix issue on undefined reference to gotoblas

21 months agoremove REALTYPEWIDTH modification
Wendi-L [Sat, 3 Dec 2022 15:15:45 +0000 (15:15 +0000)]
remove REALTYPEWIDTH modification

21 months agofix bug on metis USE_64_BIT_INDICES
Wendi-L [Fri, 2 Dec 2022 21:29:25 +0000 (21:29 +0000)]
fix bug on metis USE_64_BIT_INDICES

22 months agoupdate Trilinos
Timo Heister [Fri, 3 Jun 2022 20:13:08 +0000 (16:13 -0400)]
update Trilinos

2 years agoupdate OSX instructions
Timo Heister [Thu, 1 Sep 2022 20:36:08 +0000 (16:36 -0400)]
update OSX instructions

2 years agofix PETSc with optimization flags
Timo Heister [Sun, 28 Aug 2022 14:39:59 +0000 (10:39 -0400)]
fix PETSc with optimization flags

fixes #306

I tried various combinations of single/double quotes and
reglob-protecting ${CONFOPTS} when passing to ./configure but none of
the options worked (PETSc either only picks up -O3 or fails to configure
with '-O3).

2 years agoversion 9.4.0-r2 v9.4.0-r2
Timo Heister [Sat, 2 Jul 2022 17:08:58 +0000 (13:08 -0400)]
version 9.4.0-r2

2 years agoupdate openblas
Timo Heister [Sun, 26 Jun 2022 15:25:04 +0000 (11:25 -0400)]
update openblas

2 years agoFix path to installed CMake files.
David Wells [Fri, 24 Jun 2022 18:29:26 +0000 (14:29 -0400)]
Fix path to installed CMake files.

2 years agoversion 9.4.0-r1 v9.4.0-r1
Timo Heister [Fri, 24 Jun 2022 14:50:57 +0000 (10:50 -0400)]
version 9.4.0-r1

2 years agoswitch to 9.4
Timo Heister [Fri, 24 Jun 2022 14:50:34 +0000 (10:50 -0400)]
switch to 9.4

2 years agoMerge pull request #295 from tjhei/64bit-option
Timo Heister [Thu, 16 Jun 2022 22:42:57 +0000 (18:42 -0400)]
Merge pull request #295 from tjhei/64bit-option

new global option: USE_64_BIT_INDICES

2 years agoMerge pull request #296 from gfcas/bump_checkout
Timo Heister [Thu, 2 Jun 2022 23:50:27 +0000 (19:50 -0400)]
Merge pull request #296 from gfcas/bump_checkout

Bump github actions/checkout@v3

2 years agoBump github actions/checkout@v3 296/head
Fabian Castelli [Thu, 2 Jun 2022 20:22:50 +0000 (22:22 +0200)]
Bump github actions/checkout@v3

2 years agofixes 295/head
Timo Heister [Tue, 17 May 2022 16:32:57 +0000 (16:32 +0000)]
fixes

2 years agonew global option: USE_64_BIT_INDICES
Timo Heister [Sun, 15 May 2022 15:56:42 +0000 (11:56 -0400)]
new global option: USE_64_BIT_INDICES

2 years agoMerge pull request #294 from koecher/takeover-267-289
Uwe Köcher [Sat, 30 Apr 2022 13:43:57 +0000 (15:43 +0200)]
Merge pull request #294 from koecher/takeover-267-289

2 years agoADOL-C: Add default options that are most useful/defensive for users 294/head
Jean-Paul Pelteret [Sat, 16 Apr 2022 19:09:53 +0000 (21:09 +0200)]
ADOL-C: Add default options that are most useful/defensive for users

2 years agoAdd arch native flags to p4est and trilinos if native optimazations is on.
Menno Fraters [Thu, 4 Nov 2021 00:47:47 +0000 (17:47 -0700)]
Add arch native flags to p4est and trilinos if native optimazations is on.

2 years agoMerge pull request #284 from tjhei/native_o3
Timo Heister [Sun, 17 Apr 2022 18:55:32 +0000 (14:55 -0400)]
Merge pull request #284 from tjhei/native_o3

native optimizations: enable -O3

2 years agoMerge pull request #288 from SJ2050cn/master
Uwe Köcher [Sat, 16 Apr 2022 13:44:24 +0000 (15:44 +0200)]
Merge pull request #288 from SJ2050cn/master

2 years agoFixed `BUILDDIR` spelling error. 288/head
SJ2050 [Sat, 16 Apr 2022 13:36:56 +0000 (21:36 +0800)]
Fixed `BUILDDIR` spelling error.

2 years agonative optimizations: enable -O3 284/head
Timo Heister [Mon, 21 Mar 2022 18:14:58 +0000 (14:14 -0400)]
native optimizations: enable -O3

We found out that -O3 makes a measurable difference in matrix-free
performance for recent gcc versions. Enable this when the user requests
native optimizations.

2 years agoMerge pull request #281 from gfcas/concurrency
Timo Heister [Tue, 15 Mar 2022 00:54:04 +0000 (20:54 -0400)]
Merge pull request #281 from gfcas/concurrency

Concurrency

2 years agoAdd concurrency for main.yml 281/head
Fabian Castelli [Thu, 24 Feb 2022 23:59:21 +0000 (00:59 +0100)]
Add concurrency for main.yml

2 years agoIndent main.yml
Fabian Castelli [Thu, 24 Feb 2022 23:58:50 +0000 (00:58 +0100)]
Indent main.yml

2 years agoMerge pull request #278 from gfcas/update_package_petsc
Timo Heister [Wed, 23 Feb 2022 18:23:18 +0000 (13:23 -0500)]
Merge pull request #278 from gfcas/update_package_petsc

Clean up PETSc and SLEPc

2 years agoMerge pull request #279 from gfcas/update_package_p4est
Timo Heister [Wed, 23 Feb 2022 18:22:58 +0000 (13:22 -0500)]
Merge pull request #279 from gfcas/update_package_p4est

Update p4est.package according to dealii

2 years agoMerge pull request #280 from gfcas/symengine-v0.8.1
Timo Heister [Wed, 23 Feb 2022 18:20:01 +0000 (13:20 -0500)]
Merge pull request #280 from gfcas/symengine-v0.8.1

Symengine v0.8.1

2 years agoRemove conflicting symengine options 280/head
Fabian Castelli [Wed, 16 Feb 2022 21:24:57 +0000 (22:24 +0100)]
Remove conflicting symengine options

2 years agoSymengine v0.8.1 checksum
Fabian Castelli [Wed, 16 Feb 2022 21:14:51 +0000 (22:14 +0100)]
Symengine v0.8.1 checksum

2 years agoBump symengine version 0.8.1
Fabian Castelli [Wed, 16 Feb 2022 21:09:35 +0000 (22:09 +0100)]
Bump symengine version 0.8.1

2 years agoIndentation
Fabian Castelli [Wed, 16 Feb 2022 21:07:42 +0000 (22:07 +0100)]
Indentation

2 years agoUpdate p4est.package according to dealii 279/head
Fabian Castelli [Tue, 15 Feb 2022 18:59:20 +0000 (19:59 +0100)]
Update p4est.package according to dealii

2 years agoMerge pull request #260 from gfcas/update_package_hdf5
Timo Heister [Mon, 14 Feb 2022 15:54:40 +0000 (10:54 -0500)]
Merge pull request #260 from gfcas/update_package_hdf5

cleanup in package hdf5

2 years agoClean up PETSc and SLEPc 278/head
Fabian Castelli [Mon, 14 Feb 2022 15:31:06 +0000 (16:31 +0100)]
Clean up PETSc and SLEPc

2 years agoMerge pull request #276 from tjhei/opencascade-isfinite-patch
Matthias Maier [Mon, 14 Feb 2022 11:04:15 +0000 (05:04 -0600)]
Merge pull request #276 from tjhei/opencascade-isfinite-patch

opencascade: fix isfinite error

2 years agoMerge pull request #275 from tjhei/petsc_slepc_bump
Matthias Maier [Mon, 14 Feb 2022 11:03:39 +0000 (05:03 -0600)]
Merge pull request #275 from tjhei/petsc_slepc_bump

update petsc and slepc

2 years agoopencascade: fix isfinite error 276/head
Timo Heister [Fri, 11 Feb 2022 19:41:18 +0000 (14:41 -0500)]
opencascade: fix isfinite error

On M1 opencascade fails to compile, fix by adding a patch.

2 years agoupdate petsc and slepc 275/head
Timo Heister [Fri, 11 Feb 2022 19:19:05 +0000 (14:19 -0500)]
update petsc and slepc

This is required to compile on M1 with clang.

2 years agoHDF5 1.10.8 checksum 260/head
Fabian Castelli [Wed, 9 Feb 2022 08:29:00 +0000 (09:29 +0100)]
HDF5 1.10.8 checksum

2 years agoHDF5 v1.10.8
Fabian Castelli [Wed, 9 Feb 2022 08:17:57 +0000 (09:17 +0100)]
HDF5 v1.10.8

2 years agoUpdate package hdf5
Fabian Castelli [Mon, 7 Jun 2021 14:05:07 +0000 (16:05 +0200)]
Update package hdf5

2 years agoMerge pull request #270 from tjhei/cmake_generator
Timo Heister [Tue, 21 Dec 2021 22:01:00 +0000 (17:01 -0500)]
Merge pull request #270 from tjhei/cmake_generator

unset CMAKE_GENERATOR

2 years agounset CMAKE_GENERATOR 270/head
Timo Heister [Sun, 19 Dec 2021 12:11:52 +0000 (07:11 -0500)]
unset CMAKE_GENERATOR

One can set the CMAKE_GENERATOR to set the default generator when cmake
is executed (I have set it to Ninja). This of course confuses candi, as
no makefiles will be generated.

2 years agoMerge pull request #268 from gfcas/comment
Timo Heister [Wed, 10 Nov 2021 15:37:20 +0000 (10:37 -0500)]
Merge pull request #268 from gfcas/comment

Version independent comment

2 years agoUpdate version comment 268/head
Fabian Castelli [Tue, 9 Nov 2021 18:24:52 +0000 (19:24 +0100)]
Update version comment

2 years agoMerge pull request #266 from drwells/fix-pretty-name
Uwe Köcher [Thu, 23 Sep 2021 15:48:23 +0000 (17:48 +0200)]
Merge pull request #266 from drwells/fix-pretty-name

2 years agoMerge pull request #265 from koecher/almalinux
Uwe Köcher [Thu, 23 Sep 2021 15:48:02 +0000 (17:48 +0200)]
Merge pull request #265 from koecher/almalinux

2 years agoFix an undefined variable error. 266/head
David Wells [Thu, 23 Sep 2021 15:21:58 +0000 (11:21 -0400)]
Fix an undefined variable error.

2 years agoAdds platform AlmaLinux as replacement for CentOS 8 265/head
Uwe Köcher [Thu, 23 Sep 2021 09:24:59 +0000 (11:24 +0200)]
Adds platform AlmaLinux as replacement for CentOS 8

3 years agoMerge pull request #257 from gfcas/ginkgo_advanced_options
Uwe Köcher [Tue, 14 Sep 2021 11:14:54 +0000 (13:14 +0200)]
Merge pull request #257 from gfcas/ginkgo_advanced_options

3 years agoMerge pull request #241 from gfcas/update_package_assimp
Uwe Köcher [Tue, 14 Sep 2021 11:09:11 +0000 (13:09 +0200)]
Merge pull request #241 from gfcas/update_package_assimp

assimp: updates to 4.1.0 and adds optional v5.0.1

3 years agoMerge pull request #254 from tjhei/p4est_bump
Timo Heister [Thu, 9 Sep 2021 20:21:58 +0000 (16:21 -0400)]
Merge pull request #254 from tjhei/p4est_bump

p4est: update to 2.3.2

3 years agoUpdate deal.II-toolchain/packages/p4est.package 254/head
Timo Heister [Tue, 31 Aug 2021 16:07:16 +0000 (12:07 -0400)]
Update deal.II-toolchain/packages/p4est.package

Co-authored-by: Fabian Castelli <50630942+gfcas@users.noreply.github.com>
3 years agoAdd comment on advanced ginkgo options 257/head
Fabian Castelli [Mon, 30 Aug 2021 11:53:38 +0000 (13:53 +0200)]
Add comment on advanced ginkgo options

3 years agoUpdate assimp package 241/head
Fabian Castelli [Mon, 7 Jun 2021 13:32:26 +0000 (15:32 +0200)]
Update assimp package

3 years agoMerge pull request #256 from gfcas/ginkgo-1.4.0
Timo Heister [Sat, 28 Aug 2021 17:44:08 +0000 (13:44 -0400)]
Merge pull request #256 from gfcas/ginkgo-1.4.0

Ginkgo 1.4.0

3 years agoPrepare tar and git download option 256/head
Fabian Castelli [Sat, 28 Aug 2021 07:54:48 +0000 (09:54 +0200)]
Prepare tar and git download option

3 years agoLoad v1.4.0 by default
Fabian Castelli [Sat, 28 Aug 2021 07:48:57 +0000 (09:48 +0200)]
Load v1.4.0 by default

3 years agop4est: bump to 2.3.2
Timo Heister [Sun, 22 Aug 2021 15:23:23 +0000 (11:23 -0400)]
p4est: bump to 2.3.2

3 years agoMerge pull request #250 from koecher/macos-update
Uwe Köcher [Thu, 29 Jul 2021 22:35:58 +0000 (00:35 +0200)]
Merge pull request #250 from koecher/macos-update

macos update (bigsur update 11.5.1)

3 years agodetects version independent macos 250/head
Uwe Köcher [Thu, 29 Jul 2021 09:05:03 +0000 (11:05 +0200)]
detects version independent macos

updated macos.platform (adds security policy, shortens instructions)

3 years agoupdates installation instructions for macos bigsur
Uwe Köcher [Thu, 29 Jul 2021 08:45:36 +0000 (10:45 +0200)]
updates installation instructions for macos bigsur

3 years agodetects macos bigsur (11.5*)
Uwe Köcher [Thu, 29 Jul 2021 08:45:01 +0000 (10:45 +0200)]
detects macos bigsur (11.5*)

3 years agoadds ScaLAPACK and MUMPS to be integrated in Trilinos and PetSc (#246)
Sebastian [Thu, 29 Jul 2021 17:53:43 +0000 (19:53 +0200)]
adds ScaLAPACK and MUMPS to be integrated in Trilinos and PetSc (#246)

* Add ScaLAPACK package

* Add MUMPS package

* Removing the check if ParMETIS is available before installing MUMPS and ScaLAPACK.

* Set the packages depending on whether MKL is available

* fix typo

3 years agoMerge pull request #242 from gfcas/compiler_cleanup
Uwe Köcher [Thu, 29 Jul 2021 17:47:04 +0000 (19:47 +0200)]
Merge pull request #242 from gfcas/compiler_cleanup

Cleanup compiler variables

3 years agoMerge pull request #249 from gfcas/fix_ci_macos_compilers
Uwe Köcher [Thu, 29 Jul 2021 16:07:48 +0000 (18:07 +0200)]
Merge pull request #249 from gfcas/fix_ci_macos_compilers

3 years agoReinstall gcc compilers in macos ci jobs 249/head
Fabian Castelli [Tue, 27 Jul 2021 16:59:58 +0000 (18:59 +0200)]
Reinstall gcc compilers in macos ci jobs

3 years agoMerge pull request #248 from tjhei/trilinos_no_gfortran
Uwe Köcher [Tue, 27 Jul 2021 07:56:46 +0000 (09:56 +0200)]
Merge pull request #248 from tjhei/trilinos_no_gfortran

trilinos: remove lgfortran flag

3 years agoMerge pull request #247 from tjhei/enable-zsh
Uwe Köcher [Tue, 27 Jul 2021 07:55:58 +0000 (09:55 +0200)]
Merge pull request #247 from tjhei/enable-zsh

fix enable.sh for zsh

3 years agotrilinos: remove lgfortran flag 248/head
Timo Heister [Sat, 24 Jul 2021 21:51:41 +0000 (17:51 -0400)]
trilinos: remove lgfortran flag

I have no idea what this flag is good for and it fails for me on M1 OSX
with this, because there is no gfortran library.

3 years agofix enable.sh for zsh 247/head
Timo Heister [Sat, 24 Jul 2021 21:48:37 +0000 (17:48 -0400)]
fix enable.sh for zsh

default on OSX is zsh instead of bash and our enable.sh uses a bash
internal. This should work for bash and zsh.

3 years agoCleanup compiler variables 242/head
Fabian Castelli [Thu, 8 Jul 2021 12:32:19 +0000 (14:32 +0200)]
Cleanup compiler variables


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