]>
https://gitweb.dealii.org/ - dealii.git/log
Peter Munch [Thu, 14 May 2020 08:32:50 +0000 (10:32 +0200)]
Fix extract_rtree_level for small problem sizes
Wolfgang Bangerth [Wed, 13 May 2020 17:57:05 +0000 (19:57 +0200)]
Merge pull request #10189 from tamiko/documentation-fix-code-gallery-installation-path
Documentation: Treat code gallery projects as examples
Timo Heister [Wed, 13 May 2020 17:04:40 +0000 (13:04 -0400)]
Merge pull request #10191 from tamiko/fix_code_gallery
Documentation: fix make_gallery.pl
Timo Heister [Wed, 13 May 2020 17:02:23 +0000 (13:02 -0400)]
Merge pull request #10190 from masterleinad/run_travis
Run Travis on all branches
Matthias Maier [Wed, 13 May 2020 16:46:31 +0000 (11:46 -0500)]
Documentation: fix make_gallery.pl
Otherwise newer doxygen does not parse the generated *.h files...
See #8972
Daniel Arndt [Wed, 13 May 2020 16:41:20 +0000 (12:41 -0400)]
Run Travis on all branches
Matthias Maier [Wed, 13 May 2020 16:02:38 +0000 (11:02 -0500)]
Documentation: Treat code gallery projects as examples
Installing the code gallery projects as part of the html documentation
is not ideal. Let us install the code gallery projects as a sub
directory under the EXAMPLES_RELDIR instead:
examples/code-gallery/*
examples/step-*
Daniel Arndt [Wed, 13 May 2020 13:59:21 +0000 (09:59 -0400)]
Merge pull request #10183 from bangerth/47
Wolfgang Bangerth [Wed, 13 May 2020 13:37:08 +0000 (07:37 -0600)]
Fix missing closing braces.
Daniel Arndt [Wed, 13 May 2020 13:02:02 +0000 (09:02 -0400)]
Merge pull request #10181 from kronbichler/always_inline_method
Martin Kronbichler [Wed, 13 May 2020 10:55:29 +0000 (12:55 +0200)]
Always inline FEEvaluationBase::inverse_jacobian
Martin Kronbichler [Wed, 13 May 2020 10:01:09 +0000 (12:01 +0200)]
Merge pull request #10179 from tamiko/make_offlinedoc
contrib/utilities/makeofflinedoc.sh: Also install jpg
Martin Kronbichler [Wed, 13 May 2020 10:00:25 +0000 (12:00 +0200)]
Merge pull request #10178 from tamiko/fix_doxygen_stip_path
doxygen: Strip full @CMAKE_SOURCE_DIR@ and @CMAKE_BINARY_DIR@
Martin Kronbichler [Wed, 13 May 2020 09:58:25 +0000 (11:58 +0200)]
Merge pull request #10176 from Rombur/fix_cuda_release
CUDA: multiple fixes
Matthias Maier [Wed, 13 May 2020 06:43:02 +0000 (01:43 -0500)]
contrib/utilities/makeofflinedoc.sh: Also install jpg
Martin Kronbichler [Wed, 13 May 2020 06:01:48 +0000 (08:01 +0200)]
Merge pull request #10161 from lethe-cfd/interpolate_to_particles_unused_variables
Removed two variables which were not used in particles/utilities.h
Matthias Maier [Wed, 13 May 2020 05:12:48 +0000 (00:12 -0500)]
doxygen: Strip full @CMAKE_SOURCE_DIR@ and @CMAKE_BINARY_DIR@
The current configuration fails to strip the repository path from source
directories, e.g., on the homepage we have for example:
"""
The documentation for this struct was generated from the following files:
deal.II/lac/petsc_precondition.h
/home/dealii/dealii/source/lac/petsc_precondition.cc
"""
With this change this now reads:
"""
The documentation for this struct was generated from the following files:
include/deal.II/lac/petsc_precondition.h
source/lac/petsc_precondition.cc
"""
Matthias Maier [Wed, 13 May 2020 03:17:02 +0000 (22:17 -0500)]
Merge pull request #10173 from tjhei/jenkins_test_release_branches_master
Jenkins: also test release branches
Daniel Arndt [Wed, 13 May 2020 02:12:19 +0000 (22:12 -0400)]
Merge pull request #10168 from tamiko/fix_offending_tests
Bruno Turcksin [Wed, 13 May 2020 02:11:32 +0000 (02:11 +0000)]
Silence deprecation warnings
Bruno Turcksin [Wed, 13 May 2020 02:03:05 +0000 (02:03 +0000)]
Fix comment
Bruno Turcksin [Wed, 13 May 2020 02:02:26 +0000 (02:02 +0000)]
Remove unusable variable
Bruno Turcksin [Wed, 13 May 2020 02:01:49 +0000 (02:01 +0000)]
Use sensible default parameter
Bruno Turcksin [Wed, 13 May 2020 02:00:50 +0000 (02:00 +0000)]
Fix test after some sadd and equ functions have been removed
Timo Heister [Tue, 12 May 2020 19:14:42 +0000 (15:14 -0400)]
Jenknis: also test release branches
Daniel Arndt [Wed, 13 May 2020 01:12:05 +0000 (21:12 -0400)]
Merge pull request #10171 from tamiko/output_alternatives
Matthias Maier [Wed, 13 May 2020 00:58:08 +0000 (19:58 -0500)]
update fe_series tests again to latest changes
Matthias Maier [Wed, 13 May 2020 00:27:35 +0000 (19:27 -0500)]
do not print mesh in opencascade/stl_* tests
These tests create a mesh (with our opencascade) interface.
Unfortunately, the result pretty much depends on the mesher being used
(which changes between opencascade and oce versions), the standard
library version (libstdc++ versus libc++) and the CPU architecture.
I initially thought that the test result would not depend on the machine
this test is running on and created the output alternatives
(*.output.opencascade7.4.0) on my laptop. Evidently this did not fix
this test on our main tester. Let's simply remove the output and just
check that the code path runs without throwing an error.
Timo Heister [Tue, 12 May 2020 22:14:50 +0000 (18:14 -0400)]
Merge pull request #10166 from tamiko/documentation_fix
examples/step-69: fix texttt formulas
Matthias Maier [Tue, 12 May 2020 22:01:37 +0000 (17:01 -0500)]
examples/step-69: fix texttt formulas
blaisb [Tue, 12 May 2020 20:14:06 +0000 (16:14 -0400)]
Removed two variables which were not used in particles/utilities.h
Matthias Maier [Tue, 12 May 2020 18:00:47 +0000 (13:00 -0500)]
Merge pull request #10158 from tamiko/reuquire_current_version
Release step 6a: Require the current version of deal.II
David Wells [Tue, 12 May 2020 17:56:46 +0000 (13:56 -0400)]
Merge pull request #10157 from tamiko/update_version
Release step 5: update VERSION
David Wells [Tue, 12 May 2020 17:56:36 +0000 (13:56 -0400)]
Merge pull request #10156 from tamiko/update-tag-file
Release step 1a: Update tag list
Matthias Maier [Tue, 12 May 2020 17:55:16 +0000 (12:55 -0500)]
Merge pull request #10154 from tamiko/update-changes-file
Release step 1: Update changelog file
Matthias Maier [Tue, 12 May 2020 17:28:31 +0000 (12:28 -0500)]
Update doc/news/9.1.1-vs-9.2.0.h
Co-authored-by: David Wells <drwells@email.unc.edu>
Matthias Maier [Tue, 12 May 2020 17:28:25 +0000 (12:28 -0500)]
Update doc/news/9.1.1-vs-9.2.0.h
Co-authored-by: David Wells <drwells@email.unc.edu>
Matthias Maier [Tue, 12 May 2020 17:28:16 +0000 (12:28 -0500)]
Update doc/news/9.1.1-vs-9.2.0.h
Co-authored-by: David Wells <drwells@email.unc.edu>
Matthias Maier [Tue, 12 May 2020 17:28:08 +0000 (12:28 -0500)]
Update doc/news/9.1.1-vs-9.2.0.h
Co-authored-by: David Wells <drwells@email.unc.edu>
Matthias Maier [Tue, 12 May 2020 17:28:02 +0000 (12:28 -0500)]
Update doc/news/9.1.1-vs-9.2.0.h
Co-authored-by: David Wells <drwells@email.unc.edu>
Matthias Maier [Tue, 12 May 2020 17:27:55 +0000 (12:27 -0500)]
Update doc/news/9.1.1-vs-9.2.0.h
Co-authored-by: David Wells <drwells@email.unc.edu>
Matthias Maier [Tue, 12 May 2020 17:27:44 +0000 (12:27 -0500)]
Update doc/news/9.1.1-vs-9.2.0.h
Co-authored-by: David Wells <drwells@email.unc.edu>
Matthias Maier [Tue, 12 May 2020 17:27:20 +0000 (12:27 -0500)]
Update doc/news/9.1.1-vs-9.2.0.h
Co-authored-by: David Wells <drwells@email.unc.edu>
Matthias Maier [Tue, 12 May 2020 17:27:06 +0000 (12:27 -0500)]
Update doc/news/9.1.1-vs-9.2.0.h
Co-authored-by: David Wells <drwells@email.unc.edu>
Matthias Maier [Tue, 12 May 2020 17:17:09 +0000 (12:17 -0500)]
add dummy entries to make travis happy
Matthias Maier [Tue, 12 May 2020 17:12:07 +0000 (12:12 -0500)]
fix year range
Martin Kronbichler [Tue, 12 May 2020 17:10:52 +0000 (19:10 +0200)]
Merge pull request #10155 from masterleinad/instantiate_opencascade
Instantiate OpenCASCADE
Matthias Maier [Tue, 12 May 2020 17:08:27 +0000 (12:08 -0500)]
Require the current version of deal.II.
Matthias Maier [Tue, 12 May 2020 17:04:54 +0000 (12:04 -0500)]
update VERSION
Matthias Maier [Tue, 12 May 2020 17:01:49 +0000 (12:01 -0500)]
Release step 1a: Update tag list
Matthias Maier [Tue, 12 May 2020 16:59:15 +0000 (11:59 -0500)]
Remove now obsolete files.
Matthias Maier [Tue, 12 May 2020 16:58:22 +0000 (11:58 -0500)]
Update the changelog file for the release.
Daniel Arndt [Tue, 12 May 2020 16:47:18 +0000 (12:47 -0400)]
Instantiate OpenCASCADE
Martin Kronbichler [Tue, 12 May 2020 16:13:19 +0000 (18:13 +0200)]
Merge pull request #7513 from marcfehling/smoothness-estimator-2
Introduced SmoothnessEstimator.
Matthias Maier [Tue, 12 May 2020 15:27:25 +0000 (10:27 -0500)]
Merge pull request #10152 from marcfehling/prediction-extension
Updated doc for hp::Refinement::predict_error().
marcfehling [Tue, 12 May 2020 15:03:40 +0000 (17:03 +0200)]
Update include/deal.II/hp/refinement.h
Co-authored-by: Timo Heister <timo.heister@gmail.com>
Matthias Maier [Tue, 12 May 2020 04:48:13 +0000 (23:48 -0500)]
fix compilation
Matthias Maier [Mon, 11 May 2020 19:48:19 +0000 (14:48 -0500)]
Address typos brought up in review comments
Update include/deal.II/hp/fe_collection.h
Update include/deal.II/numerics/smoothness_estimator.h
Update include/deal.II/numerics/smoothness_estimator.h
Update include/deal.II/numerics/smoothness_estimator.h
Update include/deal.II/numerics/smoothness_estimator.h
Update include/deal.II/numerics/smoothness_estimator.h
Update include/deal.II/numerics/smoothness_estimator.h
Update include/deal.II/numerics/smoothness_estimator.h
Update include/deal.II/numerics/smoothness_estimator.h
Update include/deal.II/numerics/smoothness_estimator.h
Co-authored-by: Martin Kronbichler <kronbichler@lnm.mw.tum.de>
Marc Fehling [Wed, 29 Apr 2020 17:13:58 +0000 (19:13 +0200)]
Added SmoothnessEstimator::default_fe_series() functions returning default FESeries objects.
Removed default constructor and initialize() functions for FESeries objects.
Marc Fehling [Mon, 7 Jan 2019 12:00:03 +0000 (13:00 +0100)]
SmoothnessEstimator: Enhancements regarding applicability.
Denis Davydov [Fri, 7 Dec 2018 19:01:57 +0000 (20:01 +0100)]
SmoothnessEstimator: Implementation with dedicated coefficient decay functions for both Fourier and Legendre series expansions individually.
Marc Fehling [Wed, 21 Nov 2018 10:07:00 +0000 (11:07 +0100)]
SmoothnessEstimator: Initial implementation with FESeries template.
Marc Fehling [Tue, 12 May 2020 13:49:09 +0000 (15:49 +0200)]
No more restriction on isotropic refinement for hp::Refinement::predict_error().
Marc Fehling [Tue, 12 May 2020 13:47:01 +0000 (15:47 +0200)]
Updated doc for hp::Refinement::predict_error().
Martin Kronbichler [Tue, 12 May 2020 10:34:02 +0000 (12:34 +0200)]
Merge pull request #8603 from tjhei/add_p4est_fail_test
add failing p4est test
Martin Kronbichler [Tue, 12 May 2020 09:10:57 +0000 (11:10 +0200)]
Merge pull request #9954 from marcfehling/prediction-extension
Reworked error prediction algorithm.
Martin Kronbichler [Tue, 12 May 2020 08:15:28 +0000 (10:15 +0200)]
Merge pull request #10148 from tjhei/github-actions-windows
github actions: split windows build
Martin Kronbichler [Tue, 12 May 2020 05:56:23 +0000 (07:56 +0200)]
Merge pull request #10149 from tamiko/fix_compilation_gcc_4.9.4
Fix compilation with gcc-4.9.4
Martin Kronbichler [Tue, 12 May 2020 05:13:40 +0000 (07:13 +0200)]
Merge pull request #10147 from tjhei/doxy_grid_gen
doxygen: disable stuff in grid_generator.cc
Matthias Maier [Tue, 12 May 2020 04:45:42 +0000 (23:45 -0500)]
Merge pull request #9807 from kronbichler/improved_shell
Add additional cell options for 3D hyper shell
Daniel Arndt [Tue, 12 May 2020 03:19:28 +0000 (23:19 -0400)]
Use 64bit toolset variant
Daniel Arndt [Tue, 12 May 2020 01:31:12 +0000 (21:31 -0400)]
Merge pull request #10150 from tamiko/fix_a_test_22
David Wells [Tue, 12 May 2020 00:27:25 +0000 (20:27 -0400)]
Merge pull request #10151 from tamiko/fix_a_test_23
Test mpi/hp_step-4 disable test for 64bit indices
Matthias Maier [Mon, 11 May 2020 21:44:09 +0000 (16:44 -0500)]
Test petsc/reinit_preconditioner_0*: disable for 64bit indices
Matthias Maier [Mon, 11 May 2020 22:08:29 +0000 (17:08 -0500)]
Test mpi/hp_step-4 disable test for 64bit indices
Timo Heister [Mon, 19 Aug 2019 17:17:46 +0000 (13:17 -0400)]
add failing p4est test
This is a simple way to trigger
https://github.com/dealii/dealii/issues/7428
Matthias Maier [Mon, 11 May 2020 21:19:08 +0000 (16:19 -0500)]
Fix compilation with gcc-4.9.4
Closes: https://github.com/dealii/dealii/issues/10146
Timo Heister [Mon, 11 May 2020 20:34:43 +0000 (16:34 -0400)]
github actions: split windows build
- move windows build out of main.yml
- test VS 2017 and VS 2019
Timo Heister [Mon, 11 May 2020 20:54:08 +0000 (16:54 -0400)]
doxygen: disable stuff in grid_generator.cc
see #9914
Martin Kronbichler [Mon, 11 May 2020 20:48:38 +0000 (22:48 +0200)]
Merge pull request #10144 from tjhei/step-50-future
step-50: Possible extensions
Martin Kronbichler [Mon, 11 May 2020 20:36:52 +0000 (22:36 +0200)]
Merge pull request #10145 from tamiko/fix_a_test_21
Test boost/extract_representative_set_02: add output variant, rename test
Matthias Maier [Mon, 11 May 2020 19:56:00 +0000 (14:56 -0500)]
Address review comments (typos)
Update include/deal.II/hp/refinement.h
Update include/deal.II/numerics/adaptation_strategies.h
Update include/deal.II/numerics/adaptation_strategies.h
Co-authored-by: Martin Kronbichler <kronbichler@lnm.mw.tum.de>
Marc Fehling [Sat, 2 May 2020 22:29:42 +0000 (00:29 +0200)]
Formula for hp-refinement: Adjusted doc to what we are actually doing in the code.
Marc Fehling [Fri, 24 Apr 2020 21:24:10 +0000 (23:24 +0200)]
Reworked error prediction algorithm.
Marc Fehling [Fri, 24 Apr 2020 21:23:08 +0000 (23:23 +0200)]
Refactored AdaptationStrategies namespace.
Matthias Maier [Mon, 11 May 2020 18:52:44 +0000 (13:52 -0500)]
Test boost/extract_representative_set_02: add output variant
The actual final set of bounding boxes computed with boost depends on
the standard library being used. Funny enough the difference is only one
cell on one processor when switching from libc++ to libstc++. The output
seems to be stable with respect to standard library. I have not
investigated further, but I would bet that it boils down to an
(unstable) sort algorithm being used in the boost implementation.
For now, just provide an output variant. If this test fails again, we
might have to think about another alternative.
Matthias Maier [Mon, 11 May 2020 18:37:19 +0000 (13:37 -0500)]
Tests: boost/extract_*: reorganize code and rename test (fix typo)
Timo Heister [Mon, 11 May 2020 18:35:12 +0000 (14:35 -0400)]
step-50: Possible extensions
Daniel Arndt [Mon, 11 May 2020 16:52:17 +0000 (12:52 -0400)]
Merge pull request #10143 from tamiko/fix_a_test_20
Daniel Arndt [Mon, 11 May 2020 16:50:50 +0000 (12:50 -0400)]
Merge pull request #10136 from drwells/step-44-doc
Daniel Arndt [Mon, 11 May 2020 16:50:24 +0000 (12:50 -0400)]
Merge pull request #10138 from drwells/remove-commented-code
David Wells [Mon, 11 May 2020 16:36:15 +0000 (12:36 -0400)]
Merge pull request #10142 from resetius/new-change-record
Changelog
Matthias Maier [Mon, 11 May 2020 16:16:47 +0000 (11:16 -0500)]
Tests opencasacde/*: Add three output variants
All tests produce a visually correct output. The test fails due to
- a different mesh generator used in opencascade 7.4.0 placing vertices
slightly differently
- a slightly different refinement behavior when linking against libc++
versus libstdc++
For now, just be pragmatic and add an output variant for each. We might
have to find a smarter solution in the future
In reference to #10073
Closes #10086
See also: https://cdash.43-1.org/testSummary.php?project=1&name=opencascade%2Fstl_creation_single_patch.debug&date=2020-05-11
See also: https://cdash.43-1.org/testSummary.php?project=1&name=opencascade%2Fstl_creation_watertight.debug&date=2020-05-11
See also: https://cdash.43-1.org/testSummary.php?project=1&name=opencascade%2Fstl_refinement.debug&date=2020-05-11
Alexey Ozeritskiy [Mon, 11 May 2020 16:05:21 +0000 (19:05 +0300)]
Changelog
David Wells [Mon, 11 May 2020 15:49:34 +0000 (11:49 -0400)]
Merge pull request #10141 from tamiko/update_external_library_versions
doc: update supported version numbers of trilinos and petsc
David Wells [Mon, 11 May 2020 15:40:44 +0000 (11:40 -0400)]
Merge pull request #10140 from tamiko/update_mailmap
add a mailmap entry
Matthias Maier [Mon, 11 May 2020 15:39:25 +0000 (10:39 -0500)]
doc: update supported version numbers of trilinos and petsc
Matthias Maier [Mon, 11 May 2020 15:31:25 +0000 (10:31 -0500)]
add a mailmap entry
Matthias Maier [Mon, 11 May 2020 15:25:12 +0000 (10:25 -0500)]
add a mailmap entry
Timo Heister [Mon, 11 May 2020 15:06:41 +0000 (11:06 -0400)]
Merge pull request #10134 from kronbichler/fix_images
Make new GridGenerator images appear in the online documentation
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