]>
https://gitweb.dealii.org/ - dealii.git/log
Matthias Maier [Wed, 20 May 2020 19:49:32 +0000 (14:49 -0500)]
contrib/python_wrapper: set environment correctly
Matthias Maier [Wed, 20 May 2020 19:22:28 +0000 (14:22 -0500)]
Merge pull request #10280 from bangerth/70-2
Link in step-70 pictures and videos.
Martin Kronbichler [Wed, 20 May 2020 18:44:19 +0000 (20:44 +0200)]
Merge pull request #10139 from peterrum/dofhandler_policy_distribute_dofs_on_level
Simplify internal::DoFHandlerImplementation::Policy::ParallelDistributed::distribute_dofs_on_level()
Daniel Arndt [Wed, 20 May 2020 17:36:07 +0000 (13:36 -0400)]
Merge pull request #10283 from MFraters/fix_bug_in_symmetric_tensor_unroll
Menno Fraters [Wed, 20 May 2020 06:28:48 +0000 (23:28 -0700)]
expand symmetric tensor 24 test, testing unrolling of component indices for higher dim than 3.
David Wells [Wed, 20 May 2020 13:20:55 +0000 (09:20 -0400)]
Merge pull request #10286 from peterrum/celldata_move_implementation
Move implementation of CellData to the correct file
Peter Munch [Wed, 20 May 2020 08:23:36 +0000 (10:23 +0200)]
Move implementation of CellData to the correct file
Menno Fraters [Wed, 20 May 2020 01:59:57 +0000 (18:59 -0700)]
fix bug in symmetric tensor unrolled_to_component_indices function.
Wolfgang Bangerth [Tue, 19 May 2020 21:49:40 +0000 (15:49 -0600)]
Also link in 3d results.
Wolfgang Bangerth [Tue, 19 May 2020 18:01:25 +0000 (12:01 -0600)]
Link in step-70 pictures and videos.
Martin Kronbichler [Tue, 19 May 2020 18:01:06 +0000 (20:01 +0200)]
Merge pull request #10275 from bangerth/70
More updates to step-70
Matthias Maier [Tue, 19 May 2020 16:30:24 +0000 (11:30 -0500)]
Merge pull request #10272 from tjhei/step-70-unused-variable
step-70: remove unused variable
David Wells [Tue, 19 May 2020 15:39:07 +0000 (11:39 -0400)]
Merge pull request #10271 from tjhei/step-70-fix-petsc
step-70: add missing compress() call
Daniel Arndt [Tue, 19 May 2020 15:29:59 +0000 (11:29 -0400)]
Merge pull request #10269 from tjhei/step-70-petsc-fix
Wolfgang Bangerth [Tue, 19 May 2020 14:57:42 +0000 (08:57 -0600)]
Rename a variable in step-70 to better match its intent.
Wolfgang Bangerth [Tue, 19 May 2020 14:44:06 +0000 (08:44 -0600)]
Leave more references to step-70.
Timo Heister [Tue, 19 May 2020 13:48:58 +0000 (09:48 -0400)]
step-70: remove unused variable
Timo Heister [Tue, 19 May 2020 13:45:35 +0000 (09:45 -0400)]
step-70: add missing compress() call
fixes #10270
Timo Heister [Tue, 19 May 2020 13:36:41 +0000 (09:36 -0400)]
fix PETSc step-70 compilation
candidate for 9.2
Matthias Maier [Tue, 19 May 2020 07:19:21 +0000 (02:19 -0500)]
Merge pull request #10266 from masterleinad/fix_python_test
Fix python test with input file
Daniel Arndt [Tue, 19 May 2020 03:58:52 +0000 (23:58 -0400)]
Fix python test with input file
Matthias Maier [Tue, 19 May 2020 01:18:58 +0000 (20:18 -0500)]
Merge pull request #10257 from tamiko/fix_a_test_2
sacado/helper_scalar_coupled_3_components_01_4: avoid race condition
Matthias Maier [Tue, 19 May 2020 01:17:40 +0000 (20:17 -0500)]
Merge pull request #10259 from bangerth/70
Edits for step-70.cc
Wolfgang Bangerth [Tue, 19 May 2020 00:20:54 +0000 (18:20 -0600)]
Make a function simpler to read.
Wolfgang Bangerth [Tue, 19 May 2020 00:19:23 +0000 (18:19 -0600)]
Move a function.
Wolfgang Bangerth [Tue, 19 May 2020 00:16:55 +0000 (18:16 -0600)]
Update documentation inside the step-70.cc file.
Wolfgang Bangerth [Tue, 19 May 2020 00:12:20 +0000 (18:12 -0600)]
Simplify some code.
Wolfgang Bangerth [Mon, 18 May 2020 23:54:37 +0000 (17:54 -0600)]
Rename the penalty parameter.
Wolfgang Bangerth [Mon, 18 May 2020 23:50:07 +0000 (17:50 -0600)]
Move a piece of code to a better location.
Wolfgang Bangerth [Mon, 18 May 2020 23:19:05 +0000 (17:19 -0600)]
Use mpi_communicator instead of MPI_COMM_WORLD.
Wolfgang Bangerth [Mon, 18 May 2020 23:42:13 +0000 (17:42 -0600)]
Simplify more pieces of code.
Wolfgang Bangerth [Mon, 18 May 2020 23:07:41 +0000 (17:07 -0600)]
Simplify a piece of code.
Wolfgang Bangerth [Mon, 18 May 2020 23:06:31 +0000 (17:06 -0600)]
Add a reference to step-70.
Daniel Arndt [Mon, 18 May 2020 20:45:08 +0000 (16:45 -0400)]
Merge pull request #10256 from tamiko/fix_a_test
Wolfgang Bangerth [Mon, 18 May 2020 16:35:02 +0000 (10:35 -0600)]
Edits to the in-code documentation of step-70.
Daniel Arndt [Mon, 18 May 2020 19:08:56 +0000 (15:08 -0400)]
Merge pull request #10258 from masterleinad/fix_some_tests_lapack_werror
Wolfgang Bangerth [Sat, 16 May 2020 18:33:46 +0000 (12:33 -0600)]
Fix doxygen issue.
Make it clear to doxygen that "2018." at the beginning of a line is
not an attempt to create a numbered list...
Daniel Arndt [Mon, 18 May 2020 13:51:38 +0000 (13:51 +0000)]
Fix some tests failing without LAPAPCK support and with -Werror
Matthias Maier [Mon, 18 May 2020 14:21:16 +0000 (09:21 -0500)]
sacado/helper_scalar_coupled_3_components_01_4: avoid race condition
Matthias Maier [Mon, 18 May 2020 14:19:28 +0000 (09:19 -0500)]
arpack/step-36_ar_with_iterations: Remove iteration count
David Wells [Sat, 16 May 2020 21:23:39 +0000 (17:23 -0400)]
Merge pull request #10249 from tamiko/fix_complex_number_product_type
Workaround: Add additional complex ProductTypeImpl specializations
Matthias Maier [Sat, 16 May 2020 18:15:10 +0000 (13:15 -0500)]
mark code snippet as workaround slated for removal
Matthias Maier [Sat, 16 May 2020 18:06:28 +0000 (13:06 -0500)]
improve test and add symmetric variant as well
Matthias Maier [Sat, 16 May 2020 18:03:04 +0000 (13:03 -0500)]
add a test
Matthias Maier [Sat, 16 May 2020 17:36:11 +0000 (12:36 -0500)]
Merge pull request #10244 from bangerth/70
Edits to introduction and results section of step-70
Matthias Maier [Sat, 16 May 2020 16:59:00 +0000 (11:59 -0500)]
Workaround: Add additional complex ProductTypeImpl specializations
The workaround introduced in
32ecab6 needs an additional variant to
deduce the product type of Tensor<..., complex<Number>> and
complex<Number> correctly.
Co-authored-by: Daniel Arndt <arndtd@ornl.gov>
Wolfgang Bangerth [Fri, 15 May 2020 23:13:26 +0000 (17:13 -0600)]
Edits to the results section of step-70.
Wolfgang Bangerth [Fri, 15 May 2020 19:27:15 +0000 (13:27 -0600)]
Minor edits to the introduction of step-70.
Daniel Arndt [Sat, 16 May 2020 04:20:59 +0000 (00:20 -0400)]
Merge pull request #10228 from peterrum/step70-fixwarning
Daniel Arndt [Sat, 16 May 2020 03:24:23 +0000 (23:24 -0400)]
Merge pull request #10235 from drwells/fix-bbox-0
Wolfgang Bangerth [Sat, 16 May 2020 03:09:08 +0000 (05:09 +0200)]
Merge pull request #10245 from tjhei/update-copyright-act-3
update copyright years
Wolfgang Bangerth [Sat, 16 May 2020 03:07:35 +0000 (05:07 +0200)]
Merge pull request #10241 from tjhei/copyright-script-go-deeper
fix update-copyright not going 2 levels deep into src/include
Timo Heister [Fri, 15 May 2020 22:54:34 +0000 (18:54 -0400)]
update copyright years
with fixed script from #10241 and after a lot of other changes came in.
Timo Heister [Sat, 16 May 2020 01:15:21 +0000 (21:15 -0400)]
Merge pull request #10242 from marcfehling/fix-copyright
Fixed a few copyright years manually.
Timo Heister [Fri, 15 May 2020 22:46:50 +0000 (18:46 -0400)]
extend update-copyright script (missing files)
- fix not going 2 levels deep into src/include, reported in #10240
- add .cu files
Marc Fehling [Fri, 15 May 2020 22:55:49 +0000 (00:55 +0200)]
Fixed even more copyright years manually.
Marc Fehling [Fri, 15 May 2020 22:42:25 +0000 (00:42 +0200)]
Fixed a few copyright years manually.
Daniel Arndt [Fri, 15 May 2020 21:23:05 +0000 (17:23 -0400)]
Merge pull request #10236 from drwells/step-70-make-unique
Peter Munch [Fri, 15 May 2020 14:11:41 +0000 (16:11 +0200)]
Fix warning in step70
David Wells [Fri, 15 May 2020 21:11:33 +0000 (17:11 -0400)]
Specialize BoundingBox<0> to prevent instantiating BoundingBox<-1>.
A zero-dimensional bounding box doesn't make sense and causes weird problems
with intel's compiler when the compiler tries to instantiate
BoundingBox::cross_section().
We have to use this workaround and not something like
BoundingBox<spacedim != 1 ? spacedim - 1 : 1, Number>
cross_section(const unsigned int direction) const;
to make MSVC happy.
Martin Kronbichler [Fri, 15 May 2020 19:38:50 +0000 (21:38 +0200)]
Merge pull request #10230 from tamiko/adjust_test_output_2
Test boost/extract_rep*_02: adjust test output for libc++
Wolfgang Bangerth [Fri, 15 May 2020 17:02:42 +0000 (11:02 -0600)]
Add a reference for step-70.
Wolfgang Bangerth [Fri, 15 May 2020 16:32:06 +0000 (10:32 -0600)]
Re-classify step-70 as a fluids dynamics tutorial.
Wolfgang Bangerth [Fri, 15 May 2020 16:23:36 +0000 (10:23 -0600)]
Fix a formatting problem with step-60.
Specifically, if doxygen sees the end of a list, it sometimes gets confused and indents
the next line of text as well. That's annoying if the next line of text is the first line
of the commented program (or, more specifically, the heading for the commented program).
Wolfgang Bangerth [Fri, 15 May 2020 19:28:35 +0000 (21:28 +0200)]
Merge pull request #10237 from drwells/step-70-spelling
Improve spelling in step-70.
David Wells [Fri, 15 May 2020 17:47:50 +0000 (13:47 -0400)]
Improve spelling in step-70.
David Wells [Fri, 15 May 2020 17:38:40 +0000 (13:38 -0400)]
Use std_cxx14::make_unique in step-70.
Wolfgang Bangerth [Fri, 15 May 2020 15:54:32 +0000 (17:54 +0200)]
Merge pull request #10232 from luca-heltai/fix-doi-step-70
Updated doi.
Luca Heltai [Fri, 15 May 2020 15:19:21 +0000 (17:19 +0200)]
Updated doi.
Matthias Maier [Fri, 15 May 2020 14:59:39 +0000 (09:59 -0500)]
Test boost/extract_rep*_02: adjust test output for libc++
We have to adjust the output after
bfe81e2b89a39792ee48dd7d028e8860cc44551e also for the libc++ variant.
See
9038e6000b681910227e24302e964835a344ddf8
For reference, the difference between libstdc++ and libc++ output is as
follows:
```
--- extract_representative_set_02.with_p4est=true.mpirun=3.output 2020-05-15 09:27:53.
256578723 -0500
+++ extract_representative_set_02.with_p4est=true.mpirun=3.output.libstdc++ 2020-05-15 09:58:47.
149994734 -0500
@@ -137,16 +137,16 @@
0.5 -0.707107
DEAL:1::-0.
0732233 -0.
0732233
-0.21967 -0.
0732233
-0.21967 0.292893
+0.292893 -0.
0732233
+0.292893 0.292893
-0.
0732233 0.292893
-0.
0732233 -0.
0732233
-DEAL:1::0.21967 -1.11022e-16
-1 -1.11022e-16
+DEAL:1::0.21967 -0.
0732233
+1 -0.
0732233
1 0.382683
0.21967 0.382683
-0.21967 -1.11022e-16
+0.21967 -0.
0732233
```
Matthias Maier [Fri, 15 May 2020 14:29:38 +0000 (09:29 -0500)]
Merge pull request #10227 from kronbichler/warning_step-70
Fix warning in step-70
Martin Kronbichler [Fri, 15 May 2020 10:32:16 +0000 (12:32 +0200)]
Fix warning in step-70
Matthias Maier [Fri, 15 May 2020 06:23:11 +0000 (01:23 -0500)]
Merge pull request #10225 from kronbichler/adjust_test_output
Fix test output forgotten in #9969
Martin Kronbichler [Fri, 15 May 2020 06:12:34 +0000 (08:12 +0200)]
Fix test output forgotten in #9969
Martin Kronbichler [Fri, 15 May 2020 05:58:33 +0000 (07:58 +0200)]
Merge pull request #9078 from luca-heltai/step-70
Step 70
Martin Kronbichler [Fri, 15 May 2020 05:57:32 +0000 (07:57 +0200)]
Merge pull request #10174 from luca-heltai/fix-find-cell-around-point
Fix find active cell around point.
Matthias Maier [Fri, 15 May 2020 05:57:19 +0000 (00:57 -0500)]
Merge pull request #10220 from tjhei/test_parameter_handler_additional_file
tests: add additional output file for intel
Martin Kronbichler [Fri, 15 May 2020 05:53:46 +0000 (07:53 +0200)]
Merge pull request #9969 from marcfehling/binary-search
Revisited binary search for parallel::distributed::GridRefinement.
Martin Kronbichler [Fri, 15 May 2020 05:00:03 +0000 (07:00 +0200)]
Merge pull request #10215 from marcfehling/fix_10211
Bugfix: Cells may not receive any variable size data.
Timo Heister [Fri, 15 May 2020 02:03:25 +0000 (22:03 -0400)]
tests: add additional output file for intel
Matthias Maier [Fri, 15 May 2020 00:16:11 +0000 (19:16 -0500)]
Merge pull request #10198 from bangerth/50
Updates to step-50
Marc Fehling [Thu, 14 May 2020 22:25:31 +0000 (00:25 +0200)]
Bugfix: Cells may not receive any variable size data.
Luca Heltai [Thu, 14 May 2020 23:45:24 +0000 (01:45 +0200)]
Review by Marc.
Luca Heltai [Thu, 14 May 2020 23:12:47 +0000 (01:12 +0200)]
Fixed parameters_23.prm
Luca Heltai [Thu, 14 May 2020 22:28:21 +0000 (00:28 +0200)]
Fixed indent.
Luca Heltai [Tue, 12 May 2020 22:31:42 +0000 (00:31 +0200)]
Some minor changes. Add support for output directory.
blaisb [Tue, 12 May 2020 02:55:50 +0000 (22:55 -0400)]
- Changed the default values for the parameters for the 2D case. The default case should run easily and produce better results
- Finalized resulted for the 2D case
- Minor modifications to introduction
blaisb [Mon, 11 May 2020 15:58:59 +0000 (11:58 -0400)]
- Fixed indentation
- Corrected small typos /sentences in introduction
- Removed the automatic deletion of .vtk files for step-70
Luca Heltai [Mon, 11 May 2020 10:55:42 +0000 (12:55 +0200)]
First draft of results
Luca Heltai [Mon, 11 May 2020 00:30:42 +0000 (02:30 +0200)]
Fixed indent.
Luca Heltai [Sun, 10 May 2020 23:54:35 +0000 (01:54 +0200)]
Working 3d.
Luca Heltai [Sun, 10 May 2020 12:04:08 +0000 (14:04 +0200)]
Switched to FGMRES.
Luca Heltai [Sun, 10 May 2020 10:48:46 +0000 (12:48 +0200)]
Fixed small issues.
Rene Gassmoeller [Sun, 10 May 2020 00:02:17 +0000 (17:02 -0700)]
Fix more typos and add a paragraph about particles
Rene Gassmoeller [Sat, 9 May 2020 23:14:21 +0000 (16:14 -0700)]
Fix some typos
blaisb [Thu, 7 May 2020 02:16:00 +0000 (22:16 -0400)]
Addresses all of the corrections and comments of @peterrum
Introduction and documentation can still be improved.
Luca Heltai [Sat, 2 May 2020 21:31:06 +0000 (23:31 +0200)]
Fixed codimension one build.
blaisb [Sat, 2 May 2020 06:07:31 +0000 (02:07 -0400)]
Short fix to documentation
blaisb [Sat, 2 May 2020 05:58:26 +0000 (01:58 -0400)]
- Corrected typos and mistakes
- Finished first pass at documenting step-70
- Changed the default parameter of nitsche penalization to ensure convergence of iterative solver in parallel
- Changed the function driving the motion of the impeller to ensure it comes back at it's original place in then end
Luca Heltai [Fri, 1 May 2020 23:03:03 +0000 (01:03 +0200)]
Some more docs.
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