]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
3 years agomake_nvector_view and cleanup 11395/head
Sebastian Proell [Tue, 12 Jan 2021 09:47:58 +0000 (10:47 +0100)]
make_nvector_view and cleanup

3 years agoIntroduce SUNDIALS N_Vector module
Sebastian Proell [Fri, 18 Dec 2020 12:11:37 +0000 (13:11 +0100)]
Introduce SUNDIALS N_Vector module

3 years agoMerge pull request #11418 from marcfehling/update-27
Wolfgang Bangerth [Thu, 7 Jan 2021 05:21:58 +0000 (22:21 -0700)]
Merge pull request #11418 from marcfehling/update-27

step-27: Updated to new interface.

3 years agoMerge pull request #11422 from peterrum/simplex_compute_embedding_matrices
David Wells [Wed, 6 Jan 2021 15:48:50 +0000 (10:48 -0500)]
Merge pull request #11422 from peterrum/simplex_compute_embedding_matrices

Work on compute_embedding_matrices() for simplex

3 years agoMerge pull request #11392 from bangerth/serialize-2
Bruno Turcksin [Wed, 6 Jan 2021 14:45:13 +0000 (09:45 -0500)]
Merge pull request #11392 from bangerth/serialize-2

Better document serialization functions.

3 years agoMerge pull request #11477 from zjiaqi2018/step-74-fix
Daniel Arndt [Wed, 6 Jan 2021 05:38:05 +0000 (00:38 -0500)]
Merge pull request #11477 from zjiaqi2018/step-74-fix

step-74 fix: energy norm description

3 years agoMerge pull request #11458 from peterrum/simplex_step74
Daniel Arndt [Wed, 6 Jan 2021 05:37:49 +0000 (00:37 -0500)]
Merge pull request #11458 from peterrum/simplex_step74

Convert step-74 to a simplex test

3 years agoMerge pull request #11457 from peterrum/simplex_step_12
Daniel Arndt [Wed, 6 Jan 2021 05:37:38 +0000 (00:37 -0500)]
Merge pull request #11457 from peterrum/simplex_step_12

Convert step-12 to a simplex test

3 years agoMerge pull request #11474 from bangerth/bubbles
Daniel Arndt [Wed, 6 Jan 2021 05:37:28 +0000 (00:37 -0500)]
Merge pull request #11474 from bangerth/bubbles

Clarify a number of comments around FE_Q_Bubbles.

3 years agostep-27: Updated to new interface. 11418/head
Marc Fehling [Mon, 9 Sep 2019 16:53:14 +0000 (18:53 +0200)]
step-27: Updated to new interface.

3 years agoMerge pull request #11388 from tjhei/interpolated_data_access
Wolfgang Bangerth [Wed, 6 Jan 2021 03:59:43 +0000 (20:59 -0700)]
Merge pull request #11388 from tjhei/interpolated_data_access

Allow read access to data in Interpolated*Function

3 years agoMerge pull request #11446 from marcfehling/cell-id-08
Wolfgang Bangerth [Wed, 6 Jan 2021 03:53:08 +0000 (20:53 -0700)]
Merge pull request #11446 from marcfehling/cell-id-08

Update grid/cell_id_08 output.

3 years agoMerge pull request #11449 from peterrum/simplex_step_02
Wolfgang Bangerth [Wed, 6 Jan 2021 03:49:44 +0000 (20:49 -0700)]
Merge pull request #11449 from peterrum/simplex_step_02

Convert step-2 to a simplex test

3 years agoMerge pull request #11476 from bangerth/new
Timo Heister [Wed, 6 Jan 2021 01:33:58 +0000 (20:33 -0500)]
Merge pull request #11476 from bangerth/new

Avoid using bare 'new'.

3 years agoMerge pull request #11471 from marcfehling/default-fe-series
Daniel Arndt [Tue, 5 Jan 2021 23:15:54 +0000 (18:15 -0500)]
Merge pull request #11471 from marcfehling/default-fe-series

Adjusted settings for default FESeries object.

3 years agoadd energy norm description 11477/head
Jiaqi Zhang [Tue, 5 Jan 2021 22:38:50 +0000 (17:38 -0500)]
add energy norm description

3 years agoConvert step-74 to a simplex test 11458/head
Peter Munch [Sun, 3 Jan 2021 10:35:35 +0000 (11:35 +0100)]
Convert step-74 to a simplex test

3 years agoConvert step-12 to a simplex test 11457/head
Peter Munch [Sat, 2 Jan 2021 23:26:40 +0000 (00:26 +0100)]
Convert step-12 to a simplex test

3 years agoConvert step-2 to a simplex test 11449/head
Peter Munch [Thu, 31 Dec 2020 12:15:51 +0000 (13:15 +0100)]
Convert step-2 to a simplex test

3 years agoClarify a number of comments around FE_Q_Bubbles. 11474/head
Wolfgang Bangerth [Tue, 5 Jan 2021 17:13:23 +0000 (10:13 -0700)]
Clarify a number of comments around FE_Q_Bubbles.

3 years agoAvoid using bare 'new'. 11476/head
Wolfgang Bangerth [Tue, 5 Jan 2021 21:19:50 +0000 (14:19 -0700)]
Avoid using bare 'new'.

3 years agoMerge pull request #11456 from peterrum/simplex_tria_refinement_neighbors
Wolfgang Bangerth [Tue, 5 Jan 2021 21:14:13 +0000 (14:14 -0700)]
Merge pull request #11456 from peterrum/simplex_tria_refinement_neighbors

Add a version of update_neighbors() for simplex meshes

3 years agoMerge pull request #11473 from bangerth/pp-7
Martin Kronbichler [Tue, 5 Jan 2021 20:14:20 +0000 (21:14 +0100)]
Merge pull request #11473 from bangerth/pp-7

Minor adjustments

3 years agoAdjust spacing. 11473/head
Wolfgang Bangerth [Tue, 5 Jan 2021 17:12:31 +0000 (10:12 -0700)]
Adjust spacing.

3 years agoStore value, not reference, in a local variable.
Wolfgang Bangerth [Tue, 5 Jan 2021 17:12:54 +0000 (10:12 -0700)]
Store value, not reference, in a local variable.

3 years agoMerge pull request #11460 from cpraveen/step-26
Peter Munch [Tue, 5 Jan 2021 08:07:59 +0000 (09:07 +0100)]
Merge pull request #11460 from cpraveen/step-26

step-26: Reset time and timestep_number during pre refinement steps

3 years agoMerge pull request #11470 from marcfehling/gsl-check
Peter Munch [Tue, 5 Jan 2021 08:01:44 +0000 (09:01 +0100)]
Merge pull request #11470 from marcfehling/gsl-check

GSL no longer requirement for FESeries::Legendre in tests.

3 years agoAdjusted settings for default FESeries object. 11471/head
Marc Fehling [Tue, 5 Jan 2021 05:55:29 +0000 (22:55 -0700)]
Adjusted settings for default FESeries object.

3 years agoMerge pull request #11467 from bangerth/step-74
Daniel Arndt [Tue, 5 Jan 2021 05:16:03 +0000 (00:16 -0500)]
Merge pull request #11467 from bangerth/step-74

3 years agoGSL no longer requirement for FESeries::Legendre in tests. 11470/head
Marc Fehling [Tue, 5 Jan 2021 04:26:04 +0000 (21:26 -0700)]
GSL no longer requirement for FESeries::Legendre in tests.

3 years agoMerge pull request #11454 from peterrum/simplex_flatten_triangulation
Wolfgang Bangerth [Tue, 5 Jan 2021 04:20:13 +0000 (21:20 -0700)]
Merge pull request #11454 from peterrum/simplex_flatten_triangulation

Generalize GridGenerator::flatten_triangulation for simplex meshes

3 years agoMerge pull request #11469 from tjhei/reference_74
Wolfgang Bangerth [Tue, 5 Jan 2021 03:56:31 +0000 (20:56 -0700)]
Merge pull request #11469 from tjhei/reference_74

add step-74 to tutorial page

3 years agoReset time and timestep_number during pre refinement steps 11460/head
Praveen C [Mon, 4 Jan 2021 04:17:50 +0000 (09:47 +0530)]
Reset time and timestep_number during pre refinement steps

Otherwise, the pre-refinement is performed only once. See https://github.com/dealii/dealii/issues/10715

3 years agoadd step-74 to tutorial page 11469/head
Timo Heister [Tue, 5 Jan 2021 01:28:02 +0000 (20:28 -0500)]
add step-74 to tutorial page

3 years agoUpdate text and code of step-74. 11467/head
Wolfgang Bangerth [Tue, 5 Jan 2021 00:36:48 +0000 (17:36 -0700)]
Update text and code of step-74.

3 years agoLeave a reference to step-74.
Wolfgang Bangerth [Tue, 5 Jan 2021 00:35:55 +0000 (17:35 -0700)]
Leave a reference to step-74.

3 years agoFix spelling.
Wolfgang Bangerth [Mon, 4 Jan 2021 23:43:18 +0000 (16:43 -0700)]
Fix spelling.

3 years agoAdd references to step-47.
Wolfgang Bangerth [Mon, 4 Jan 2021 23:10:54 +0000 (16:10 -0700)]
Add references to step-47.

3 years agoBe consistent in the spelling and use of 'unsigned int'.
Wolfgang Bangerth [Mon, 4 Jan 2021 22:26:52 +0000 (15:26 -0700)]
Be consistent in the spelling and use of 'unsigned int'.

3 years agoMinor changes
Peter Munch [Sun, 3 Jan 2021 11:45:32 +0000 (12:45 +0100)]
Minor changes

3 years agoMerge pull request #10932 from zjiaqi2018/step-74
Wolfgang Bangerth [Mon, 4 Jan 2021 22:13:31 +0000 (15:13 -0700)]
Merge pull request #10932 from zjiaqi2018/step-74

Step 74: Symmetric interior penalty Galerkin (SIPG) method for Poisson's equation

3 years agoMerge pull request #11415 from Rombur/disable_extra
David Wells [Mon, 4 Jan 2021 15:01:04 +0000 (10:01 -0500)]
Merge pull request #11415 from Rombur/disable_extra

Ignore deprecated-volatile warning when disabling exta diagnostic

3 years agoMerge pull request #11453 from peterrum/use_vector_data_exchanger_full_remove
Martin Kronbichler [Mon, 4 Jan 2021 12:47:05 +0000 (13:47 +0100)]
Merge pull request #11453 from peterrum/use_vector_data_exchanger_full_remove

Remove MF::AD::use_vector_data_exchanger_full

3 years agoAdd a version of update_neighbors() for simplex meshes 11456/head
Peter Munch [Sat, 2 Jan 2021 22:25:58 +0000 (23:25 +0100)]
Add a version of update_neighbors() for simplex meshes

3 years agoMerge pull request #11455 from peterrum/step-12-quad
Peter Munch [Sun, 3 Jan 2021 07:12:11 +0000 (08:12 +0100)]
Merge pull request #11455 from peterrum/step-12-quad

Step-12: select quadrature at a central place

3 years agoStep-12: select quadrature at a central place 11455/head
Peter Munch [Sat, 2 Jan 2021 10:55:40 +0000 (11:55 +0100)]
Step-12: select quadrature at a central place

3 years agoGeneralize GridGenerator::flatten_triangulation for simplex meshes 11454/head
Peter Munch [Sat, 2 Jan 2021 22:38:22 +0000 (23:38 +0100)]
Generalize GridGenerator::flatten_triangulation for simplex meshes

3 years agoRemove use_vector_data_exchanger_full 11453/head
Peter Munch [Sat, 2 Jan 2021 10:25:58 +0000 (11:25 +0100)]
Remove use_vector_data_exchanger_full

3 years agoMerge pull request #11445 from marcfehling/hp-cell-weights
Peter Munch [Sat, 2 Jan 2021 10:09:12 +0000 (11:09 +0100)]
Merge pull request #11445 from marcfehling/hp-cell-weights

Minor change to CellWeights exception handling.

3 years agoMinor change to CellWeights exception handling. 11445/head
Marc Fehling [Thu, 31 Dec 2020 02:19:26 +0000 (19:19 -0700)]
Minor change to CellWeights exception handling.

3 years agoBetter document serialization functions. 11392/head
Wolfgang Bangerth [Thu, 17 Dec 2020 21:38:47 +0000 (14:38 -0700)]
Better document serialization functions.

Specifically, equip all of them with a link to the BOOST library.

3 years agoWork on compute_embedding_matrices for simplex 11422/head
Peter Munch [Sat, 26 Dec 2020 21:55:06 +0000 (22:55 +0100)]
Work on compute_embedding_matrices for simplex

3 years agoMerge pull request #11452 from masterleinad/fix_redefinition_default_argument
Daniel Arndt [Thu, 31 Dec 2020 23:37:15 +0000 (18:37 -0500)]
Merge pull request #11452 from masterleinad/fix_redefinition_default_argument

Fix redefinition of default argument in test

3 years agoFix redefinition of default argument in test 11452/head
Daniel Arndt [Thu, 31 Dec 2020 21:22:40 +0000 (16:22 -0500)]
Fix redefinition of default argument in test

3 years agoMerge pull request #11444 from drwells/refactor-hdf5-abort
Wolfgang Bangerth [Thu, 31 Dec 2020 20:58:11 +0000 (13:58 -0700)]
Merge pull request #11444 from drwells/refactor-hdf5-abort

Refactor the HDF5 abort code.

3 years agoMerge pull request #11447 from marcfehling/hyper-line
David Wells [Thu, 31 Dec 2020 20:57:45 +0000 (15:57 -0500)]
Merge pull request #11447 from marcfehling/hyper-line

Utility grid generator function `hyper_line` for tests.

3 years agoMerge pull request #11428 from peterrum/simplex_get_projection_matrix
David Wells [Thu, 31 Dec 2020 20:57:18 +0000 (15:57 -0500)]
Merge pull request #11428 from peterrum/simplex_get_projection_matrix

FETools::get_projection_matrix for simplices

4 years agoMerge pull request #11371 from peterrum/q_collection_fe_interface_values
David Wells [Thu, 31 Dec 2020 18:30:33 +0000 (13:30 -0500)]
Merge pull request #11371 from peterrum/q_collection_fe_interface_values

FEInterfaceValues: pass to the constructor hp::QCollection

4 years agoMerge pull request #11318 from peterrum/cg_reshuffle
David Wells [Thu, 31 Dec 2020 17:21:43 +0000 (12:21 -0500)]
Merge pull request #11318 from peterrum/cg_reshuffle

Reshuffle code in SolverCG

4 years agoFETools::get_projection_matrix for simplices 11428/head
Peter Munch [Mon, 28 Dec 2020 10:59:23 +0000 (11:59 +0100)]
FETools::get_projection_matrix for simplices

4 years agoMerge pull request #11442 from bangerth/pp-5
Peter Munch [Thu, 31 Dec 2020 05:28:52 +0000 (06:28 +0100)]
Merge pull request #11442 from bangerth/pp-5

Make a test more verbose.

4 years agoUtility grid hyper_line for tests. 11447/head
Marc Fehling [Thu, 31 Dec 2020 03:48:18 +0000 (20:48 -0700)]
Utility grid hyper_line for tests.

4 years agoUpdate grid/cell_id_08 output. 11446/head
Marc Fehling [Thu, 31 Dec 2020 03:06:38 +0000 (20:06 -0700)]
Update grid/cell_id_08 output.

4 years agoRefactor the HDF5 abort code. 11444/head
David Wells [Thu, 31 Dec 2020 01:28:40 +0000 (20:28 -0500)]
Refactor the HDF5 abort code.

4 years agoMerge pull request #11437 from drwells/fe-nothing
Daniel Arndt [Thu, 31 Dec 2020 01:36:48 +0000 (20:36 -0500)]
Merge pull request #11437 from drwells/fe-nothing

Clean up FE_Nothing::get_name().

4 years agoMerge pull request #11441 from masterleinad/avoid_particle_warning
Daniel Arndt [Thu, 31 Dec 2020 01:36:24 +0000 (20:36 -0500)]
Merge pull request #11441 from masterleinad/avoid_particle_warning

Avoid warning about unused variable in particle.h

4 years agoMerge pull request #11440 from dangars/exceptions_hdf5_dataset
David Wells [Thu, 31 Dec 2020 01:07:15 +0000 (20:07 -0500)]
Merge pull request #11440 from dangars/exceptions_hdf5_dataset

Avoid MPI calls in the HDF5 destructors when there is an exception - DataSet

4 years agoMerge pull request #11426 from peterrum/ReferenceCell_utility_functions
Wolfgang Bangerth [Thu, 31 Dec 2020 00:05:43 +0000 (17:05 -0700)]
Merge pull request #11426 from peterrum/ReferenceCell_utility_functions

Add utility functions to ReferenceCell namespace

4 years agoMake a test more verbose. 11442/head
Wolfgang Bangerth [Thu, 31 Dec 2020 00:00:11 +0000 (17:00 -0700)]
Make a test more verbose.

4 years agoMerge pull request #11425 from peterrum/fix_output_grid/cell_id_08
Wolfgang Bangerth [Wed, 30 Dec 2020 23:57:04 +0000 (16:57 -0700)]
Merge pull request #11425 from peterrum/fix_output_grid/cell_id_08

Fix output of grid/cell_id_08

4 years agoClean up FE_Nothing::get_name(). 11437/head
David Wells [Thu, 24 Dec 2020 02:14:45 +0000 (21:14 -0500)]
Clean up FE_Nothing::get_name().

4 years agoAvoid warning about unused variable in particle.h 11441/head
Daniel Arndt [Wed, 30 Dec 2020 23:08:05 +0000 (18:08 -0500)]
Avoid warning about unused variable in particle.h

4 years agoAvoid MPI calls in the HDF5 destructors when there is an exception 11440/head
Daniel Garcia-Sanchez [Wed, 30 Dec 2020 21:14:05 +0000 (22:14 +0100)]
Avoid MPI calls in the HDF5 destructors when there is an exception

4 years agoMerge pull request #11439 from peterrum/fix-boost-header-warning
Luca Heltai [Wed, 30 Dec 2020 12:52:58 +0000 (13:52 +0100)]
Merge pull request #11439 from peterrum/fix-boost-header-warning

Fix warning due to boost

4 years agoFix warning due to boost 11439/head
Peter Munch [Wed, 30 Dec 2020 12:19:35 +0000 (13:19 +0100)]
Fix warning due to boost

4 years agoReshuffle code in SoverCG 11318/head
Peter Munch [Fri, 4 Dec 2020 11:26:50 +0000 (12:26 +0100)]
Reshuffle code in SoverCG

4 years agoMerge pull request #11438 from luca-heltai/fix-boost-header
Luca Heltai [Wed, 30 Dec 2020 10:32:20 +0000 (11:32 +0100)]
Merge pull request #11438 from luca-heltai/fix-boost-header

Fix boost include file.

4 years agoMerge pull request #11408 from peterrum/compute_diagonal_simplex
Martin Kronbichler [Wed, 30 Dec 2020 09:36:10 +0000 (10:36 +0100)]
Merge pull request #11408 from peterrum/compute_diagonal_simplex

MatrixFreeTools::compute_diagonal() for simplex grid

4 years agoMerge pull request #11436 from peterrum/hmg_test
Martin Kronbichler [Wed, 30 Dec 2020 09:35:17 +0000 (10:35 +0100)]
Merge pull request #11436 from peterrum/hmg_test

Add test for geometric global-coarsening multigrid

4 years agoFix boost include file. 11438/head
Luca Heltai [Wed, 30 Dec 2020 08:54:02 +0000 (09:54 +0100)]
Fix boost include file.

4 years agoAdd utility functions to ReferenceCell namespace 11426/head
Peter Munch [Sun, 27 Dec 2020 14:11:57 +0000 (15:11 +0100)]
Add utility functions to ReferenceCell namespace

4 years agoMerge pull request #11423 from peterrum/unit_tangential_vectors
Peter Munch [Wed, 30 Dec 2020 07:41:23 +0000 (08:41 +0100)]
Merge pull request #11423 from peterrum/unit_tangential_vectors

Introduce ReferenceCell::unit_tangential_vectors()

4 years agoIntroduce ReferenceCell::unit_tangential_vectors() 11423/head
Peter Munch [Sun, 27 Dec 2020 06:34:18 +0000 (07:34 +0100)]
Introduce ReferenceCell::unit_tangential_vectors()

4 years agoMerge pull request #11424 from peterrum/compute_orientation
David Wells [Tue, 29 Dec 2020 22:19:24 +0000 (17:19 -0500)]
Merge pull request #11424 from peterrum/compute_orientation

Introduce ReferenceCell::compute_orientation and ::permute_according_orientation

4 years agoMerge pull request #11419 from peterrum/pyramid_wedges_fixes
David Wells [Tue, 29 Dec 2020 21:47:54 +0000 (16:47 -0500)]
Merge pull request #11419 from peterrum/pyramid_wedges_fixes

Pyramid/wedge: diverse fixes

4 years agoFix output of grid/cell_id_08 11425/head
Peter Munch [Sun, 27 Dec 2020 08:55:51 +0000 (09:55 +0100)]
Fix output of grid/cell_id_08

4 years agoAdd test for geometric global-coarsening multigrid 11436/head
Peter Munch [Tue, 29 Dec 2020 20:23:55 +0000 (21:23 +0100)]
Add test for geometric global-coarsening multigrid

4 years agoMerge pull request #11430 from bangerth/fenothing
Martin Kronbichler [Tue, 29 Dec 2020 20:08:18 +0000 (21:08 +0100)]
Merge pull request #11430 from bangerth/fenothing

Better document FE_Nothing.

4 years agoMerge pull request #11433 from peterrum/pmg_test
Martin Kronbichler [Tue, 29 Dec 2020 20:06:46 +0000 (21:06 +0100)]
Merge pull request #11433 from peterrum/pmg_test

Add test for p-multigrid

4 years agoMerge pull request #11434 from peterrum/mg_transfer_util
Wolfgang Bangerth [Tue, 29 Dec 2020 17:44:20 +0000 (10:44 -0700)]
Merge pull request #11434 from peterrum/mg_transfer_util

Rename file in test folder

4 years agoMerge pull request #11278 from sebproell/update-sundials-arkode-5.4.0
Luca Heltai [Tue, 29 Dec 2020 16:17:21 +0000 (17:17 +0100)]
Merge pull request #11278 from sebproell/update-sundials-arkode-5.4.0

SUNDIALS: update ARKode to version 5.4.0

4 years agoMerge pull request #11432 from peterrum/compute_diagonal_const
Daniel Arndt [Tue, 29 Dec 2020 13:50:32 +0000 (08:50 -0500)]
Merge pull request #11432 from peterrum/compute_diagonal_const

MatrixFreeTools::compute_diagonal() make class const

4 years agoRename file in test folder 11434/head
Peter Munch [Tue, 29 Dec 2020 08:00:55 +0000 (09:00 +0100)]
Rename file in test folder

4 years agoAdd test for p-multigrid 11433/head
Peter Munch [Tue, 29 Dec 2020 07:50:32 +0000 (08:50 +0100)]
Add test for p-multigrid

4 years agoMatrixFreeTools::compute_diagonal() make class const 11432/head
Peter Munch [Tue, 29 Dec 2020 07:40:53 +0000 (08:40 +0100)]
MatrixFreeTools::compute_diagonal() make class const

4 years agoBetter document FE_Nothing. 11430/head
Wolfgang Bangerth [Mon, 28 Dec 2020 23:08:25 +0000 (16:08 -0700)]
Better document FE_Nothing.

4 years agoMerge pull request #11431 from tamiko/fix_ginkgo_linkage
Matthias Maier [Tue, 29 Dec 2020 00:34:03 +0000 (18:34 -0600)]
Merge pull request #11431 from tamiko/fix_ginkgo_linkage

CMake: Fix Ginkgo linkage

4 years agoCMake: Fix Ginkgo linkage 11431/head
Matthias Maier [Tue, 29 Dec 2020 00:19:00 +0000 (18:19 -0600)]
CMake: Fix Ginkgo linkage

We also have to the "ginkgo" library itself...

In reference to #11413

4 years agoMerge pull request #11427 from peterrum/ci_same_name
Daniel Arndt [Mon, 28 Dec 2020 20:26:16 +0000 (15:26 -0500)]
Merge pull request #11427 from peterrum/ci_same_name

Fix tests with output files with same name

4 years agoMerge pull request #11259 from malhartidke/addPBCinst
Daniel Arndt [Mon, 28 Dec 2020 14:17:23 +0000 (09:17 -0500)]
Merge pull request #11259 from malhartidke/addPBCinst


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