Timo Heister [Thu, 14 Jan 2021 14:34:18 +0000 (09:34 -0500)]
add step-55 as a simplex test
Timo Heister [Tue, 12 Jan 2021 16:05:10 +0000 (11:05 -0500)]
Merge pull request #11500 from bangerth/doc
Add some comments to VectorTools::interpolate_boundary_values().
Wolfgang Bangerth [Tue, 12 Jan 2021 00:51:31 +0000 (17:51 -0700)]
Also point to the difference between nodal and non-nodal elements.
David Wells [Mon, 11 Jan 2021 20:18:33 +0000 (15:18 -0500)]
Merge pull request #11502 from mschreter/assert_tria_simplex_grid_generator
Assert type of coarse grid in p:d:T
Magdalena Schreter [Mon, 11 Jan 2021 11:01:33 +0000 (12:01 +0100)]
add assert for unsupported p::d::T in the simplex grid generators
assert is moved to distributed/tria.cc
David Wells [Mon, 11 Jan 2021 14:12:32 +0000 (09:12 -0500)]
Merge pull request #11501 from peterrum/read_vtk_msh_mixed
Enabling mixed meshes in GridIn::read_vkt() and read_msh()
Peter Munch [Sun, 10 Jan 2021 21:44:15 +0000 (22:44 +0100)]
Enabling mixed meshes in GridIn::read_vkt() amd read_msh()
Wolfgang Bangerth [Sat, 9 Jan 2021 22:32:43 +0000 (15:32 -0700)]
Add some comments to VectorTools::interpolate_boundary_values().
Wolfgang Bangerth [Sat, 9 Jan 2021 20:24:01 +0000 (13:24 -0700)]
Merge pull request #11499 from tjhei/doc_dsp
improve DynamicSparsityPattern usage documentation
Timo Heister [Sat, 9 Jan 2021 19:34:58 +0000 (14:34 -0500)]
improve DynamicSparsityPattern usage documentation
David Wells [Sat, 9 Jan 2021 14:42:17 +0000 (09:42 -0500)]
Merge pull request #11498 from peterrum/typo
Fix typo
Peter Munch [Sat, 9 Jan 2021 07:39:53 +0000 (08:39 +0100)]
Fix typo
Wolfgang Bangerth [Sat, 9 Jan 2021 04:32:25 +0000 (21:32 -0700)]
Merge pull request #11479 from marcfehling/default-fe-series
Adjusted settings for default FESeries::Legendre object.
Wolfgang Bangerth [Fri, 8 Jan 2021 21:50:13 +0000 (14:50 -0700)]
Merge pull request #11341 from Rombur/bicgstab
Rework breakdown condition in BiCGSTAB
Wolfgang Bangerth [Fri, 8 Jan 2021 21:43:08 +0000 (14:43 -0700)]
Merge pull request #11493 from marcfehling/to-cell
Replace deprecated CellId::to_cell().
Bruno Turcksin [Fri, 8 Jan 2021 21:26:47 +0000 (16:26 -0500)]
Merge pull request #11495 from drwells/fix-exodusii-test-output
Fix the VTK output in the exodusii test.
David Wells [Fri, 8 Jan 2021 15:19:54 +0000 (10:19 -0500)]
Fix the VTK output in the exodusii test.
The output for this test was generated before
2f788a5fdab, which changed (fixed)
the node numbering of pyramids. We need to apply the same permutation to this
output file.
Bruno Turcksin [Fri, 8 Jan 2021 15:17:41 +0000 (10:17 -0500)]
Merge pull request #11494 from drwells/fix-bbox-container-ctor
Fix BoundingBox's Container ctor.
David Wells [Fri, 8 Jan 2021 03:30:12 +0000 (22:30 -0500)]
Merge pull request #11475 from bangerth/74
Clarify what the picture shows in step-74.
David Wells [Fri, 8 Jan 2021 03:09:16 +0000 (22:09 -0500)]
Fix BoundingBox's Container ctor.
I get inscrutably long boost errors right now (which was partially fixed in
13bc2f8a021) about boost not being able to figure out type conversions. Lets
just roll our own BoundingBox function to fix the problem here and with other
versions of boost.
Marc Fehling [Fri, 8 Jan 2021 03:04:34 +0000 (20:04 -0700)]
Replace deprecated CellId::to_cell().
Timo Heister [Fri, 8 Jan 2021 02:10:23 +0000 (21:10 -0500)]
Merge pull request #11492 from bangerth/const-2
Make one variable 'const'.
Timo Heister [Thu, 7 Jan 2021 22:10:15 +0000 (17:10 -0500)]
Merge pull request #11486 from adamqc/fix-distribute_dofs
Fix bug in DoFHandler::distribute_dofs
Timo Heister [Thu, 7 Jan 2021 22:08:22 +0000 (17:08 -0500)]
Merge pull request #11491 from bangerth/const
Clean up some in function_lib.cc.
Timo Heister [Thu, 7 Jan 2021 22:02:50 +0000 (17:02 -0500)]
Merge pull request #11468 from bangerth/L-function
Better explain the purpose of the L-singularity function.
Peter Munch [Thu, 7 Jan 2021 17:45:42 +0000 (18:45 +0100)]
Merge pull request #11378 from bangerth/figure
Link in the correct figure.
Wolfgang Bangerth [Thu, 7 Jan 2021 16:23:36 +0000 (09:23 -0700)]
Make one variable 'const'.
Wolfgang Bangerth [Thu, 7 Jan 2021 16:22:01 +0000 (09:22 -0700)]
Clean up some in function_lib.cc.
Specifically, add 'const' to a lot of variables. Also rename r2 to r_squared.
Wolfgang Bangerth [Tue, 5 Jan 2021 00:39:06 +0000 (17:39 -0700)]
Better explain the purpose of the L-singularity function.
Wolfgang Bangerth [Thu, 7 Jan 2021 14:38:37 +0000 (07:38 -0700)]
Merge pull request #11488 from marcfehling/update-27-2
step-27: Changed relative threshold. Updated output.
Ce Qin [Wed, 6 Jan 2021 12:09:15 +0000 (20:09 +0800)]
Fix bug in distribute_dofs
Marc Fehling [Thu, 7 Jan 2021 01:31:47 +0000 (18:31 -0700)]
step-27: Changed relative threshold. Updated output.
Wolfgang Bangerth [Thu, 7 Jan 2021 05:21:58 +0000 (22:21 -0700)]
Merge pull request #11418 from marcfehling/update-27
step-27: Updated to new interface.
David Wells [Wed, 6 Jan 2021 15:48:50 +0000 (10:48 -0500)]
Merge pull request #11422 from peterrum/simplex_compute_embedding_matrices
Work on compute_embedding_matrices() for simplex
Bruno Turcksin [Wed, 6 Jan 2021 14:45:13 +0000 (09:45 -0500)]
Merge pull request #11392 from bangerth/serialize-2
Better document serialization functions.
Daniel Arndt [Wed, 6 Jan 2021 05:38:05 +0000 (00:38 -0500)]
Merge pull request #11477 from zjiaqi2018/step-74-fix
step-74 fix: energy norm description
Daniel Arndt [Wed, 6 Jan 2021 05:37:49 +0000 (00:37 -0500)]
Merge pull request #11458 from peterrum/simplex_step74
Convert step-74 to a simplex test
Daniel Arndt [Wed, 6 Jan 2021 05:37:38 +0000 (00:37 -0500)]
Merge pull request #11457 from peterrum/simplex_step_12
Convert step-12 to a simplex test
Daniel Arndt [Wed, 6 Jan 2021 05:37:28 +0000 (00:37 -0500)]
Merge pull request #11474 from bangerth/bubbles
Clarify a number of comments around FE_Q_Bubbles.
Marc Fehling [Mon, 9 Sep 2019 16:53:14 +0000 (18:53 +0200)]
step-27: Updated to new interface.
Marc Fehling [Wed, 6 Jan 2021 04:14:59 +0000 (21:14 -0700)]
Adjusted settings for default FESeries::Legendre object.
Wolfgang Bangerth [Wed, 6 Jan 2021 03:59:43 +0000 (20:59 -0700)]
Merge pull request #11388 from tjhei/interpolated_data_access
Allow read access to data in Interpolated*Function
Wolfgang Bangerth [Wed, 6 Jan 2021 03:53:08 +0000 (20:53 -0700)]
Merge pull request #11446 from marcfehling/cell-id-08
Update grid/cell_id_08 output.
Wolfgang Bangerth [Wed, 6 Jan 2021 03:49:44 +0000 (20:49 -0700)]
Merge pull request #11449 from peterrum/simplex_step_02
Convert step-2 to a simplex test
Timo Heister [Wed, 6 Jan 2021 01:33:58 +0000 (20:33 -0500)]
Merge pull request #11476 from bangerth/new
Avoid using bare 'new'.
Daniel Arndt [Tue, 5 Jan 2021 23:15:54 +0000 (18:15 -0500)]
Merge pull request #11471 from marcfehling/default-fe-series
Adjusted settings for default FESeries object.
Jiaqi Zhang [Tue, 5 Jan 2021 22:38:50 +0000 (17:38 -0500)]
add energy norm description
Peter Munch [Sun, 3 Jan 2021 10:35:35 +0000 (11:35 +0100)]
Convert step-74 to a simplex test
Peter Munch [Sat, 2 Jan 2021 23:26:40 +0000 (00:26 +0100)]
Convert step-12 to a simplex test
Peter Munch [Thu, 31 Dec 2020 12:15:51 +0000 (13:15 +0100)]
Convert step-2 to a simplex test
Wolfgang Bangerth [Tue, 5 Jan 2021 17:13:23 +0000 (10:13 -0700)]
Clarify a number of comments around FE_Q_Bubbles.
Wolfgang Bangerth [Tue, 5 Jan 2021 21:19:50 +0000 (14:19 -0700)]
Avoid using bare 'new'.
Wolfgang Bangerth [Tue, 5 Jan 2021 21:14:13 +0000 (14:14 -0700)]
Merge pull request #11456 from peterrum/simplex_tria_refinement_neighbors
Add a version of update_neighbors() for simplex meshes
Martin Kronbichler [Tue, 5 Jan 2021 20:14:20 +0000 (21:14 +0100)]
Merge pull request #11473 from bangerth/pp-7
Minor adjustments
Wolfgang Bangerth [Tue, 5 Jan 2021 17:19:33 +0000 (10:19 -0700)]
Clarify what the picture shows in step-74.
Wolfgang Bangerth [Tue, 5 Jan 2021 17:12:31 +0000 (10:12 -0700)]
Adjust spacing.
Wolfgang Bangerth [Tue, 5 Jan 2021 17:12:54 +0000 (10:12 -0700)]
Store value, not reference, in a local variable.
Peter Munch [Tue, 5 Jan 2021 08:07:59 +0000 (09:07 +0100)]
Merge pull request #11460 from cpraveen/step-26
step-26: Reset time and timestep_number during pre refinement steps
Peter Munch [Tue, 5 Jan 2021 08:01:44 +0000 (09:01 +0100)]
Merge pull request #11470 from marcfehling/gsl-check
GSL no longer requirement for FESeries::Legendre in tests.
Marc Fehling [Tue, 5 Jan 2021 05:55:29 +0000 (22:55 -0700)]
Adjusted settings for default FESeries object.
Daniel Arndt [Tue, 5 Jan 2021 05:16:03 +0000 (00:16 -0500)]
Merge pull request #11467 from bangerth/step-74
Marc Fehling [Tue, 5 Jan 2021 04:26:04 +0000 (21:26 -0700)]
GSL no longer requirement for FESeries::Legendre in tests.
Wolfgang Bangerth [Tue, 5 Jan 2021 04:20:13 +0000 (21:20 -0700)]
Merge pull request #11454 from peterrum/simplex_flatten_triangulation
Generalize GridGenerator::flatten_triangulation for simplex meshes
Wolfgang Bangerth [Tue, 5 Jan 2021 03:56:31 +0000 (20:56 -0700)]
Merge pull request #11469 from tjhei/reference_74
add step-74 to tutorial page
Praveen C [Mon, 4 Jan 2021 04:17:50 +0000 (09:47 +0530)]
Reset time and timestep_number during pre refinement steps
Otherwise, the pre-refinement is performed only once. See https://github.com/dealii/dealii/issues/10715
Timo Heister [Tue, 5 Jan 2021 01:28:02 +0000 (20:28 -0500)]
add step-74 to tutorial page
Wolfgang Bangerth [Tue, 5 Jan 2021 00:36:48 +0000 (17:36 -0700)]
Update text and code of step-74.
Wolfgang Bangerth [Tue, 5 Jan 2021 00:35:55 +0000 (17:35 -0700)]
Leave a reference to step-74.
Wolfgang Bangerth [Mon, 4 Jan 2021 23:43:18 +0000 (16:43 -0700)]
Fix spelling.
Wolfgang Bangerth [Mon, 4 Jan 2021 23:10:54 +0000 (16:10 -0700)]
Add references to step-47.
Wolfgang Bangerth [Mon, 4 Jan 2021 22:26:52 +0000 (15:26 -0700)]
Be consistent in the spelling and use of 'unsigned int'.
Peter Munch [Sun, 3 Jan 2021 11:45:32 +0000 (12:45 +0100)]
Minor changes
Wolfgang Bangerth [Mon, 4 Jan 2021 22:13:31 +0000 (15:13 -0700)]
Merge pull request #10932 from zjiaqi2018/step-74
Step 74: Symmetric interior penalty Galerkin (SIPG) method for Poisson's equation
David Wells [Mon, 4 Jan 2021 15:01:04 +0000 (10:01 -0500)]
Merge pull request #11415 from Rombur/disable_extra
Ignore deprecated-volatile warning when disabling exta diagnostic
Martin Kronbichler [Mon, 4 Jan 2021 12:47:05 +0000 (13:47 +0100)]
Merge pull request #11453 from peterrum/use_vector_data_exchanger_full_remove
Remove MF::AD::use_vector_data_exchanger_full
Peter Munch [Sat, 2 Jan 2021 22:25:58 +0000 (23:25 +0100)]
Add a version of update_neighbors() for simplex meshes
Peter Munch [Sun, 3 Jan 2021 07:12:11 +0000 (08:12 +0100)]
Merge pull request #11455 from peterrum/step-12-quad
Step-12: select quadrature at a central place
Peter Munch [Sat, 2 Jan 2021 10:55:40 +0000 (11:55 +0100)]
Step-12: select quadrature at a central place
Peter Munch [Sat, 2 Jan 2021 22:38:22 +0000 (23:38 +0100)]
Generalize GridGenerator::flatten_triangulation for simplex meshes
Peter Munch [Sat, 2 Jan 2021 10:25:58 +0000 (11:25 +0100)]
Remove use_vector_data_exchanger_full
Peter Munch [Sat, 2 Jan 2021 10:09:12 +0000 (11:09 +0100)]
Merge pull request #11445 from marcfehling/hp-cell-weights
Minor change to CellWeights exception handling.
Marc Fehling [Thu, 31 Dec 2020 02:19:26 +0000 (19:19 -0700)]
Minor change to CellWeights exception handling.
Wolfgang Bangerth [Thu, 17 Dec 2020 21:38:47 +0000 (14:38 -0700)]
Better document serialization functions.
Specifically, equip all of them with a link to the BOOST library.
Peter Munch [Sat, 26 Dec 2020 21:55:06 +0000 (22:55 +0100)]
Work on compute_embedding_matrices for simplex
Daniel Arndt [Thu, 31 Dec 2020 23:37:15 +0000 (18:37 -0500)]
Merge pull request #11452 from masterleinad/fix_redefinition_default_argument
Fix redefinition of default argument in test
Daniel Arndt [Thu, 31 Dec 2020 21:22:40 +0000 (16:22 -0500)]
Fix redefinition of default argument in test
Wolfgang Bangerth [Thu, 31 Dec 2020 20:58:11 +0000 (13:58 -0700)]
Merge pull request #11444 from drwells/refactor-hdf5-abort
Refactor the HDF5 abort code.
David Wells [Thu, 31 Dec 2020 20:57:45 +0000 (15:57 -0500)]
Merge pull request #11447 from marcfehling/hyper-line
Utility grid generator function `hyper_line` for tests.
David Wells [Thu, 31 Dec 2020 20:57:18 +0000 (15:57 -0500)]
Merge pull request #11428 from peterrum/simplex_get_projection_matrix
FETools::get_projection_matrix for simplices
David Wells [Thu, 31 Dec 2020 18:30:33 +0000 (13:30 -0500)]
Merge pull request #11371 from peterrum/q_collection_fe_interface_values
FEInterfaceValues: pass to the constructor hp::QCollection
David Wells [Thu, 31 Dec 2020 17:21:43 +0000 (12:21 -0500)]
Merge pull request #11318 from peterrum/cg_reshuffle
Reshuffle code in SolverCG
Peter Munch [Mon, 28 Dec 2020 10:59:23 +0000 (11:59 +0100)]
FETools::get_projection_matrix for simplices
Peter Munch [Thu, 31 Dec 2020 05:28:52 +0000 (06:28 +0100)]
Merge pull request #11442 from bangerth/pp-5
Make a test more verbose.
Marc Fehling [Thu, 31 Dec 2020 03:48:18 +0000 (20:48 -0700)]
Utility grid hyper_line for tests.
Marc Fehling [Thu, 31 Dec 2020 03:06:38 +0000 (20:06 -0700)]
Update grid/cell_id_08 output.
David Wells [Thu, 31 Dec 2020 01:28:40 +0000 (20:28 -0500)]
Refactor the HDF5 abort code.
Daniel Arndt [Thu, 31 Dec 2020 01:36:48 +0000 (20:36 -0500)]
Merge pull request #11437 from drwells/fe-nothing
Clean up FE_Nothing::get_name().
Daniel Arndt [Thu, 31 Dec 2020 01:36:24 +0000 (20:36 -0500)]
Merge pull request #11441 from masterleinad/avoid_particle_warning
Avoid warning about unused variable in particle.h
David Wells [Thu, 31 Dec 2020 01:07:15 +0000 (20:07 -0500)]
Merge pull request #11440 from dangars/exceptions_hdf5_dataset
Avoid MPI calls in the HDF5 destructors when there is an exception - DataSet
Wolfgang Bangerth [Thu, 31 Dec 2020 00:05:43 +0000 (17:05 -0700)]
Merge pull request #11426 from peterrum/ReferenceCell_utility_functions
Add utility functions to ReferenceCell namespace
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