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https://gitweb.dealii.org/ - dealii.git/log
Peter Munch [Thu, 23 Sep 2021 07:03:43 +0000 (09:03 +0200)]
ShapeInfo: store both subface interpolation matrices
Marc Fehling [Tue, 21 Sep 2021 20:55:10 +0000 (14:55 -0600)]
Merge pull request #12770 from bangerth/ref
Fix two bibtex entries.
Wolfgang Bangerth [Mon, 20 Sep 2021 03:46:40 +0000 (21:46 -0600)]
Fix two bibtex entries.
For one, add a DOI. For the other, remove the 'type' field: There is no
reason why this shouldn't just be printed as a 'PhD thesis'.
Martin Kronbichler [Mon, 20 Sep 2021 06:55:16 +0000 (08:55 +0200)]
Merge pull request #12769 from zjiaqi2018/matrix-free-documentation
matrix-free documentation
Martin Kronbichler [Mon, 20 Sep 2021 06:54:32 +0000 (08:54 +0200)]
Merge pull request #12767 from peterrum/HangingNodes_artificial_neighbors
HangingNodes: ignore artificial neighbors
Peter Munch [Sat, 18 Sep 2021 18:11:32 +0000 (20:11 +0200)]
HangingNodes: ignore artificial neighbors
Peter Munch [Sun, 19 Sep 2021 06:52:09 +0000 (08:52 +0200)]
Merge pull request #12768 from kronbichler/mf_no_inner_faces
MatrixFree: Do not build inner face data if not requested
Jiaqi Zhang [Sun, 19 Sep 2021 00:45:57 +0000 (00:45 +0000)]
improve documentation
Martin Kronbichler [Sat, 18 Sep 2021 19:58:34 +0000 (21:58 +0200)]
New test case
Martin Kronbichler [Sat, 18 Sep 2021 19:58:18 +0000 (21:58 +0200)]
Do not build inner face data if not requested
Martin Kronbichler [Sat, 18 Sep 2021 18:44:09 +0000 (20:44 +0200)]
Merge pull request #12765 from bangerth/references
Add a few references to the FE_Q_iso_Q1 element documentation.
Peter Munch [Fri, 17 Sep 2021 20:46:48 +0000 (22:46 +0200)]
Merge pull request #12764 from Rombur/cuda_hanging_node
Refactor hanging_nodes_internals.h
Wolfgang Bangerth [Thu, 16 Sep 2021 21:40:30 +0000 (15:40 -0600)]
Add a few references to the FE_Q_iso_Q1 element documentation.
Bruno Turcksin [Thu, 16 Sep 2021 20:53:31 +0000 (20:53 +0000)]
Refactor hanging_nodes_internals.h
Martin Kronbichler [Wed, 15 Sep 2021 10:22:58 +0000 (12:22 +0200)]
Merge pull request #12755 from jppelteret/trilinos_linear_operator_01
Allow TrilinosPayload to use another TrilinosPayload as an exemplar operator
Jean-Paul Pelteret [Sun, 12 Sep 2021 20:43:39 +0000 (22:43 +0200)]
Add changelog entry
Jean-Paul Pelteret [Sun, 12 Sep 2021 18:01:31 +0000 (20:01 +0200)]
Add tests for inverse_operator() using Trilinos payload
Jean-Paul Pelteret [Tue, 14 Sep 2021 19:32:04 +0000 (21:32 +0200)]
Add generic constructor for TrilinosPayload
Jean-Paul Pelteret [Sun, 12 Sep 2021 20:37:48 +0000 (22:37 +0200)]
Permit TrilinosPayload to use itself as an exemplar operator
Martin Kronbichler [Tue, 14 Sep 2021 13:30:18 +0000 (15:30 +0200)]
Merge pull request #12758 from peterrum/mesh_classifier_vector
Rename VECTOR to VectorType
Peter Munch [Tue, 14 Sep 2021 07:02:39 +0000 (09:02 +0200)]
Rename VECTOR to VectorType
Bruno Turcksin [Mon, 13 Sep 2021 21:39:54 +0000 (17:39 -0400)]
Merge pull request #12651 from jppelteret/scratch_data_04
Peter Munch [Mon, 13 Sep 2021 07:14:14 +0000 (09:14 +0200)]
Merge pull request #12753 from kronbichler/reduce_test_runtime
Reduce run time of FEEvaluation tests with Hessians
Jean-Paul Pelteret [Sun, 12 Sep 2021 20:36:59 +0000 (22:36 +0200)]
Add new variant of TrilinosWrappers::linear_operator()
Martin Kronbichler [Sat, 11 Sep 2021 09:22:26 +0000 (11:22 +0200)]
Reduce run time of FEEvaluation tests with Hessians
Martin Kronbichler [Sat, 11 Sep 2021 09:03:14 +0000 (11:03 +0200)]
Merge pull request #12751 from marcfehling/fix-line-identity
Bugfix: Invalid dofs on lines with similar FEs not correctly merged.
Marc Fehling [Thu, 9 Sep 2021 18:14:54 +0000 (12:14 -0600)]
Bugfix: Invalid dofs on lines with similar FEs not correctly merged.
Martin Kronbichler [Thu, 9 Sep 2021 11:58:47 +0000 (13:58 +0200)]
Merge pull request #12750 from kronbichler/avoid_unused_variable
Avoid warning about unused variable
Martin Kronbichler [Thu, 9 Sep 2021 07:42:39 +0000 (09:42 +0200)]
Avoid warning about unused variable
Martin Kronbichler [Thu, 9 Sep 2021 07:25:39 +0000 (09:25 +0200)]
Merge pull request #12692 from drwells/to-array
Make Tensor::unroll() work with iterators.
Martin Kronbichler [Thu, 9 Sep 2021 07:23:08 +0000 (09:23 +0200)]
Merge pull request #12744 from bergbauer/hessians_on_general_cells
Hessians on general cells and faces
David Wells [Fri, 20 Aug 2021 21:08:09 +0000 (17:08 -0400)]
Change Tensor::unroll() to take iterator pairs.
David Wells [Wed, 8 Sep 2021 13:25:20 +0000 (09:25 -0400)]
Merge pull request #12749 from bangerth/size_type
Consistently declare size_type in preconditioners derived from PreconditionRelaxation.
Wolfgang Bangerth [Wed, 8 Sep 2021 02:31:52 +0000 (20:31 -0600)]
Consistently declare size_type in preconditioners derived from PreconditionRelaxation.
The base class declares a 'size_type' typedef, but only some of the derived classes
import it. Do so consistently, and do it by inheriting the type instead of
re-inventing the wheel.
David Wells [Tue, 24 Aug 2021 18:27:24 +0000 (14:27 -0400)]
Use iterators in Tensor::unroll_recursion().
This makes the code applicable for more linear data structures than just Vector.
Wolfgang Bangerth [Tue, 7 Sep 2021 16:02:31 +0000 (10:02 -0600)]
Merge pull request #12747 from Rombur/fix_warnings
Fix unused-but-set-variable warnings
Daniel Arndt [Tue, 7 Sep 2021 13:52:07 +0000 (09:52 -0400)]
Merge pull request #12748 from simonsticko/read_vtk_doc
Avoid comment from grid_in.cc showing up in doc of read_vtk.
Simon Sticko [Tue, 7 Sep 2021 13:19:49 +0000 (15:19 +0200)]
Avoid comment from grid_in.cc showing up in doc of read_vtk.
By changing the /// to // in the cc-file.
Bruno Turcksin [Tue, 7 Sep 2021 12:16:15 +0000 (12:16 +0000)]
Fix unused-but-set-variabel warnings
Maximilian Bergbauer [Tue, 24 Aug 2021 07:40:34 +0000 (09:40 +0200)]
Hessains on general cells and faces
Martin Kronbichler [Tue, 7 Sep 2021 05:09:15 +0000 (07:09 +0200)]
Merge pull request #12741 from bangerth/47
Adjust some symbols in step-47.
Martin Kronbichler [Tue, 7 Sep 2021 05:08:10 +0000 (07:08 +0200)]
Merge pull request #12746 from peterrum/MGTransferGlobalCoarsening_elements
Update documentation of MGTransferGlobalCoarsening regarding supported elements
Martin Kronbichler [Tue, 7 Sep 2021 05:07:42 +0000 (07:07 +0200)]
Merge pull request #12738 from peterrum/interpolate_to_mg
Fix MGTransferMatrixFree::interpolate_to_mg() for PBC
Peter Munch [Mon, 6 Sep 2021 16:24:07 +0000 (18:24 +0200)]
Update documentation of MGTransferGlobalCoarsening regarding supported elements
Martin Kronbichler [Mon, 6 Sep 2021 18:14:02 +0000 (20:14 +0200)]
Merge pull request #12731 from peterrum/gc_memory_consumption
Implement MGTransferGlobalCoarsening::memory_consumption()
Peter Munch [Fri, 3 Sep 2021 08:10:47 +0000 (10:10 +0200)]
Fix MGTransferMatrixFree::interpolate_to_mg() for PBC
Peter Munch [Mon, 6 Sep 2021 17:27:40 +0000 (19:27 +0200)]
Merge pull request #12745 from peterrum/copy_to_mg_fix
Fix MGTransferGlobalCoarsening::copy_to_mg()
Peter Munch [Mon, 6 Sep 2021 13:58:05 +0000 (15:58 +0200)]
Fix MGTransferGlobalCoarsening::copy_to_mg()
Martin Kronbichler [Sun, 5 Sep 2021 18:22:29 +0000 (20:22 +0200)]
Merge pull request #12743 from peterrum/HangingNodes
Extend references of HangingNodes
Peter Munch [Wed, 1 Sep 2021 20:44:37 +0000 (22:44 +0200)]
Implement MGTransferGlobalCoarsening::memory_consumption()
Peter Munch [Sun, 5 Sep 2021 09:22:51 +0000 (11:22 +0200)]
Extend references of HangingNodes
Peter Munch [Sun, 5 Sep 2021 09:09:43 +0000 (11:09 +0200)]
Merge pull request #12742 from kronbichler/fix_matrix_vector_hessian_faces
Fix test for Hessians on faces with MatrixFree
Marc Fehling [Sat, 4 Sep 2021 20:23:10 +0000 (14:23 -0600)]
Merge pull request #12739 from slfuchs/add-test-checking-insert-particle
Add test for inserting particle method
Sebastian Fuchs [Fri, 3 Sep 2021 09:28:07 +0000 (11:28 +0200)]
Add test checking insert particle method
follows #12724, #12727
Peter Munch [Sat, 4 Sep 2021 15:22:17 +0000 (17:22 +0200)]
Merge pull request #12740 from kronbichler/eval_bugfix_hessians
FEFaceEvaluation: Do not run into reduced reads with Hessians
Martin Kronbichler [Sat, 4 Sep 2021 14:26:21 +0000 (16:26 +0200)]
Fix test for Hessians on faces with MatrixFree
Wolfgang Bangerth [Fri, 3 Sep 2021 21:20:37 +0000 (15:20 -0600)]
Adjust some symbols in step-47.
Martin Kronbichler [Fri, 3 Sep 2021 17:46:11 +0000 (19:46 +0200)]
FEFaceEvaluation: Do not run into reduced reads with Hessians
Martin Kronbichler [Fri, 3 Sep 2021 06:31:33 +0000 (08:31 +0200)]
Merge pull request #12714 from peterrum/vt_point_values_docu
Extend the documentation of VT::point_values()
Martin Kronbichler [Fri, 3 Sep 2021 06:30:42 +0000 (08:30 +0200)]
Merge pull request #12733 from peterrum/get_multigrid
Implement PreconditionMG::get_multigrid()
Martin Kronbichler [Fri, 3 Sep 2021 06:30:13 +0000 (08:30 +0200)]
Merge pull request #12735 from Rombur/fix_cuda
Fix size of data copied to constant memory and add missing include
Marc Fehling [Thu, 2 Sep 2021 23:07:04 +0000 (17:07 -0600)]
Merge pull request #12717 from bangerth/next
Use std::next instead of ++object.begin().
Marc Fehling [Thu, 2 Sep 2021 21:38:20 +0000 (15:38 -0600)]
Merge pull request #12736 from bangerth/stack
Add a static_assert to DataOutStack.
Wolfgang Bangerth [Fri, 27 Aug 2021 20:26:21 +0000 (14:26 -0600)]
Use std::prev in one place.
Wolfgang Bangerth [Fri, 27 Aug 2021 17:33:40 +0000 (11:33 -0600)]
Also use std::next for ++object.begin(x).
Wolfgang Bangerth [Fri, 27 Aug 2021 17:30:16 +0000 (11:30 -0600)]
Also use std::next for ++object.begin_active().
Wolfgang Bangerth [Fri, 27 Aug 2021 17:23:51 +0000 (11:23 -0600)]
Use std::next instead of ++object.begin().
Wolfgang Bangerth [Thu, 2 Sep 2021 20:36:35 +0000 (14:36 -0600)]
Declare std::iterator_traits for sparse matrix iterators.
Wolfgang Bangerth [Sat, 28 Aug 2021 22:23:37 +0000 (16:23 -0600)]
Declare local difference_type for sparse matrix iterators.
Wolfgang Bangerth [Thu, 2 Sep 2021 19:26:44 +0000 (13:26 -0600)]
Add a static_assert to DataOutStack.
Bruno Turcksin [Thu, 2 Sep 2021 17:52:22 +0000 (17:52 +0000)]
Fix size of data copied to constant memory and add missing include
David Wells [Thu, 2 Sep 2021 13:57:55 +0000 (09:57 -0400)]
Merge pull request #12734 from gfcas/changelog_ginkgo_version
Add changelog entry for ginkgo 1.4.0 requirement
Fabian Castelli [Thu, 2 Sep 2021 07:14:51 +0000 (09:14 +0200)]
Add changelog entry for ginkgo 1.4.0 requirement
Peter Munch [Wed, 1 Sep 2021 20:56:23 +0000 (22:56 +0200)]
Implement PreconditionMG::get_multigrid()
Wolfgang Bangerth [Thu, 2 Sep 2021 02:10:28 +0000 (20:10 -0600)]
Merge pull request #12732 from tamiko/boost_177_compatibility
Boost 1.77 compatibility: change order of includes
Matthias Maier [Wed, 1 Sep 2021 22:36:42 +0000 (17:36 -0500)]
Boost 1.77 compatibility: change order of includes
Otherwise, including both header files in reverse order leads to a
compilation failure:
```
In file included from /usr/include/boost/geometry/index/detail/rtree/rstar/choose_next_node.hpp:25,
from /usr/include/boost/geometry/index/detail/rtree/rstar/rstar.hpp:15,
from /usr/include/boost/geometry/index/rtree.hpp:80,
from ../include/deal.II/numerics/rtree.h:29,
from ../include/deal.II/grid/grid_tools.h:49,
from ../include/deal.II/numerics/vector_tools_point_gradient.templates.h:22,
from ../source/numerics/vector_tools_point_gradient.cc:17:
/usr/include/boost/geometry/index/detail/algorithms/intersection_content.hpp: In function ‘bool boost::geometry::index::detail::disjoint_box_box(const Box&, const Box&, const boost::geometry::default_strategy&)’:
/usr/include/boost/geometry/index/detail/algorithms/intersection_content.hpp:35:32: error: ‘boost::geometry::strategy::disjoint’ has not been declared
35 | typedef typename strategy::disjoint::services::default_strategy<Box, Box>::type strategy_type;
| ^~~~~~~~
/usr/include/boost/geometry/index/detail/algorithms/intersection_content.hpp:35:68: error: expected unqualified-id before ‘<’ token
35 | typedef typename strategy::disjoint::services::default_strategy<Box, Box>::type strategy_type;
| ^
/usr/include/boost/geometry/index/detail/algorithms/intersection_content.hpp:36:83: error: class template argument deduction failed:
36 | return geometry::detail::disjoint::disjoint_box_box(box1, box2, strategy_type());
```
Matthias Maier [Wed, 1 Sep 2021 21:47:54 +0000 (16:47 -0500)]
Merge pull request #12703 from gfcas/cmake_ginkgo
Require GINKGO 1.4.0
Peter Munch [Wed, 1 Sep 2021 08:48:59 +0000 (10:48 +0200)]
Merge pull request #12730 from kronbichler/step26-fix
step-26: Remove stray newline in formula
Martin Kronbichler [Wed, 1 Sep 2021 07:56:30 +0000 (09:56 +0200)]
step-26: Remove stray newline in formula
Marc Fehling [Tue, 31 Aug 2021 19:13:56 +0000 (13:13 -0600)]
Merge pull request #12729 from bangerth/mutable
Make some static local variables mutable members.
Wolfgang Bangerth [Tue, 31 Aug 2021 17:21:52 +0000 (11:21 -0600)]
Make some static local variables mutable members.
Daniel Arndt [Tue, 31 Aug 2021 13:02:15 +0000 (09:02 -0400)]
Merge pull request #12727 from slfuchs/fix-deadlock-particle-insertion
Sebastian Fuchs [Tue, 31 Aug 2021 10:16:44 +0000 (12:16 +0200)]
Add changelog entry
Martin Kronbichler [Tue, 31 Aug 2021 09:57:33 +0000 (11:57 +0200)]
Merge pull request #12725 from Rombur/time_stepping
Fix a bug in EmbeddedExplicitRungeKutta default constructor
Martin Kronbichler [Tue, 31 Aug 2021 09:48:35 +0000 (11:48 +0200)]
Merge pull request #12726 from bangerth/doc
Improve documentation of PolynomialsRaviartThomas a bit.
Sebastian Fuchs [Tue, 31 Aug 2021 07:42:50 +0000 (09:42 +0200)]
Fix bug in particle handler insertion
Fix a bug in ParticleHandler::insert_particles(const
std::vector<Point<spacedim>> &positions) that occurs when no particles
are inserted on some processors.
Wolfgang Bangerth [Tue, 31 Aug 2021 01:13:35 +0000 (19:13 -0600)]
Improve documentation of PolynomialsRaviartThomas a bit.
Bruno Turcksin [Mon, 30 Aug 2021 18:58:46 +0000 (18:58 +0000)]
Fix a bug in EmbeddedExplicitRungeKutta default constructor
- Fix a bug where some variables were not initialized.
- Fix documentation in RungeKutta
- Remove unused variable in ImplicitRungeKutta
Martin Kronbichler [Mon, 30 Aug 2021 14:18:56 +0000 (16:18 +0200)]
Merge pull request #12711 from marcfehling/identities-nobug
Identity constraints in 3D are correct.
Martin Kronbichler [Mon, 30 Aug 2021 14:16:37 +0000 (16:16 +0200)]
Merge pull request #12720 from peterrum/MGTwoLevelTransfer_unify
Unify structure of MGTwoLevelTransfer::prolongate_and_add() and ::restrict_and_add()
Martin Kronbichler [Mon, 30 Aug 2021 14:16:22 +0000 (16:16 +0200)]
Merge pull request #12723 from peterrum/loop_over_active_or_level_cells
Simplify code in MGTwoLevelTransferImplementation by introducing a helper function
Martin Kronbichler [Mon, 30 Aug 2021 07:08:16 +0000 (09:08 +0200)]
Merge pull request #12705 from peterrum/pft_create_description_from_triangulation_partition_levels
Allow to partition levels in TriangulationDescription::Utilities::create_description_from_triangulation()
Peter Munch [Sun, 29 Aug 2021 20:26:15 +0000 (22:26 +0200)]
Simplify code in MGTwoLevelTransferImplementation by introducing a helper function
Marc Fehling [Sun, 29 Aug 2021 06:04:08 +0000 (00:04 -0600)]
Merge pull request #12722 from peterrum/restrict_and_add_zero_out_ghost_values
Move a zero_out_ghost_values
Marc Fehling [Sun, 29 Aug 2021 06:03:54 +0000 (00:03 -0600)]
Merge pull request #12721 from peterrum/FineDoFHandlerView_names
Fix the name of some variables
Peter Munch [Sat, 28 Aug 2021 19:39:34 +0000 (21:39 +0200)]
Move a zero_out_ghost_values
Peter Munch [Sat, 28 Aug 2021 19:31:22 +0000 (21:31 +0200)]
Fix the name of some variables
Peter Munch [Sat, 28 Aug 2021 18:59:35 +0000 (20:59 +0200)]
Unify structure of MGTwoLevelTransfer::prolongate_and_add() and ::restrict_and_add()
David Wells [Sat, 28 Aug 2021 14:13:07 +0000 (10:13 -0400)]
Merge pull request #12716 from bangerth/identities-5
Change the return type of hp::FECollection::hp_*_dof_identities.
Peter Munch [Fri, 27 Aug 2021 07:28:23 +0000 (09:28 +0200)]
Extend the documentation of VT::point_values()
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