]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
2 years agoSparseMatrix::reinit(): accept other sparse matrix 12863/head
Peter Munch [Fri, 22 Oct 2021 16:54:46 +0000 (18:54 +0200)]
SparseMatrix::reinit(): accept other sparse matrix

2 years agoMerge pull request #12825 from marcfehling/pd-debug
Bruno Turcksin [Fri, 22 Oct 2021 15:23:14 +0000 (11:23 -0400)]
Merge pull request #12825 from marcfehling/pd-debug

2 years agoMerge pull request #12858 from peterrum/interpolate_to_mg_without_dofhandler
Peter Munch [Fri, 22 Oct 2021 06:28:27 +0000 (08:28 +0200)]
Merge pull request #12858 from peterrum/interpolate_to_mg_without_dofhandler

Add MGTransferGlobalCoarsening::interpolate_to_mg() that does not take DoFHandler

2 years agoMerge pull request #12847 from peterrum/data_out_pyramids
Wolfgang Bangerth [Thu, 21 Oct 2021 23:29:01 +0000 (17:29 -0600)]
Merge pull request #12847 from peterrum/data_out_pyramids

DataOut for pyramids: reorder at the end

2 years agoAdd MGTransferGlobalCoarsening::interpolate_to_mg() that does not take DoFHandler 12858/head
Peter Munch [Thu, 21 Oct 2021 17:33:46 +0000 (19:33 +0200)]
Add MGTransferGlobalCoarsening::interpolate_to_mg() that does not take DoFHandler

2 years agoDataOut for pyramids: reorder at the end 12847/head
Peter Munch [Tue, 19 Oct 2021 07:52:11 +0000 (09:52 +0200)]
DataOut for pyramids: reorder at the end

2 years agoMerge pull request #12857 from gfcas/doc_dof_tools
Wolfgang Bangerth [Thu, 21 Oct 2021 17:22:17 +0000 (11:22 -0600)]
Merge pull request #12857 from gfcas/doc_dof_tools

Update doc make_flux_sparsity_pattern

2 years agoMerge pull request #12856 from gfcas/typo
Wolfgang Bangerth [Thu, 21 Oct 2021 17:21:03 +0000 (11:21 -0600)]
Merge pull request #12856 from gfcas/typo

Fix typo

2 years agoMerge pull request #12851 from peterrum/wedge_pyramid_test
Wolfgang Bangerth [Thu, 21 Oct 2021 17:16:57 +0000 (11:16 -0600)]
Merge pull request #12851 from peterrum/wedge_pyramid_test

DataOut: add wedge/pyramid test

2 years agoUpdate doc make_flux_sparsity_pattern 12857/head
Fabian Castelli [Thu, 21 Oct 2021 16:25:31 +0000 (18:25 +0200)]
Update doc make_flux_sparsity_pattern

2 years agoFix typo 12856/head
Fabian Castelli [Thu, 21 Oct 2021 13:08:47 +0000 (15:08 +0200)]
Fix typo

2 years agoMerge pull request #12849 from bangerth/duplication
Martin Kronbichler [Thu, 21 Oct 2021 08:18:26 +0000 (10:18 +0200)]
Merge pull request #12849 from bangerth/duplication

Reduce duplication of information.

2 years agoMerge pull request #12787 from vachan-potluri/read_unv
Marc Fehling [Thu, 21 Oct 2021 06:52:49 +0000 (00:52 -0600)]
Merge pull request #12787 from vachan-potluri/read_unv

Ignore any sections before 2411 in `GridIn::read_unv()`

2 years agoIgnore any sections before 2411 in `GridIn::read_unv()` 12787/head
Vachan Potluri [Thu, 21 Oct 2021 05:02:30 +0000 (10:32 +0530)]
Ignore any sections before 2411 in `GridIn::read_unv()`

2 years agoMerge pull request #12822 from bangerth/49
Timo Heister [Wed, 20 Oct 2021 22:00:07 +0000 (18:00 -0400)]
Merge pull request #12822 from bangerth/49

Minor text updates to the step-49 gmsh discussion.

2 years agoDataOut: add wedge/pyramid test 12851/head
Peter Munch [Tue, 19 Oct 2021 21:40:20 +0000 (23:40 +0200)]
DataOut: add wedge/pyramid test

2 years agoMerge pull request #12853 from peterrum/convert_generalized_support_point_values_to_d...
Wolfgang Bangerth [Wed, 20 Oct 2021 19:23:39 +0000 (13:23 -0600)]
Merge pull request #12853 from peterrum/convert_generalized_support_point_values_to_dof_values_wedges_pyramids

Implement convert_generalized_support_point_values_to_dof_values for wedges/pyramids

2 years agoReduce duplication of information. 12849/head
Wolfgang Bangerth [Tue, 19 Oct 2021 16:10:09 +0000 (10:10 -0600)]
Reduce duplication of information.

Instead, use ReferenceCell as the one normative place to draw vertex orders from.

2 years agoImplement convert_generalized_support_point_values_to_dof_values for wedges/pyramids 12853/head
Peter Munch [Wed, 20 Oct 2021 08:34:37 +0000 (10:34 +0200)]
Implement convert_generalized_support_point_values_to_dof_values for wedges/pyramids

2 years agoMerge pull request #12850 from kronbichler/followup-chebyshev
Peter Munch [Wed, 20 Oct 2021 07:44:48 +0000 (09:44 +0200)]
Merge pull request #12850 from kronbichler/followup-chebyshev

PreconditionChebyshev: Update documentation

2 years agoMerge pull request #12816 from marcfehling/rotate
Daniel Arndt [Wed, 20 Oct 2021 02:56:53 +0000 (22:56 -0400)]
Merge pull request #12816 from marcfehling/rotate

2 years agoMerge pull request #12852 from marcfehling/magic-pi
Daniel Arndt [Wed, 20 Oct 2021 02:52:22 +0000 (22:52 -0400)]
Merge pull request #12852 from marcfehling/magic-pi

2 years agoNo more magic number Pi. 12852/head
Marc Fehling [Tue, 19 Oct 2021 23:44:02 +0000 (17:44 -0600)]
No more magic number Pi.

2 years agoMerge pull request #12846 from peterrum/distance_function
Peter Munch [Tue, 19 Oct 2021 20:09:50 +0000 (22:09 +0200)]
Merge pull request #12846 from peterrum/distance_function

Rename Functions::LevelSet -> Functions::SignedDistance

2 years agoMerge pull request #12848 from bangerth/refcell-3
Bruno Turcksin [Tue, 19 Oct 2021 19:29:23 +0000 (15:29 -0400)]
Merge pull request #12848 from bangerth/refcell-3

2 years agoPreconditionChebyshev: Update documentation 12850/head
Martin Kronbichler [Tue, 19 Oct 2021 18:25:44 +0000 (20:25 +0200)]
PreconditionChebyshev: Update documentation

2 years agoMerge pull request #12844 from bangerth/refcell-2
Martin Kronbichler [Tue, 19 Oct 2021 18:10:31 +0000 (20:10 +0200)]
Merge pull request #12844 from bangerth/refcell-2

Replace uses of GeometryInfo.

2 years agoMerge pull request #12819 from kronbichler/chebyshev_locality
Peter Munch [Tue, 19 Oct 2021 17:23:05 +0000 (19:23 +0200)]
Merge pull request #12819 from kronbichler/chebyshev_locality

Enable PreconditionChebyshev to update a sub-range of vector entries

2 years agoSystematize construction of vertices for wedges. 12848/head
Wolfgang Bangerth [Tue, 19 Oct 2021 15:59:52 +0000 (09:59 -0600)]
Systematize construction of vertices for wedges.

2 years agoUpdate and unify interface for `Physics` and `GridTools` rotations. 12816/head
Marc Fehling [Tue, 12 Oct 2021 20:10:40 +0000 (14:10 -0600)]
Update and unify interface for `Physics` and `GridTools` rotations.

2 years agoGeneralize `GridTools::rotate` for arbitrary rotation axes.
Marc Fehling [Tue, 12 Oct 2021 02:06:19 +0000 (20:06 -0600)]
Generalize `GridTools::rotate` for arbitrary rotation axes.

2 years agoMerge pull request #12845 from peterrum/wedge_fix_order_vertices
Wolfgang Bangerth [Tue, 19 Oct 2021 15:55:29 +0000 (09:55 -0600)]
Merge pull request #12845 from peterrum/wedge_fix_order_vertices

Fix order of vertices of wedges in ReferenceCell::vertex

2 years agoReplace uses of GeometryInfo. 12844/head
Wolfgang Bangerth [Tue, 19 Oct 2021 03:33:31 +0000 (21:33 -0600)]
Replace uses of GeometryInfo.

2 years agoExtend documentation 12819/head
Martin Kronbichler [Tue, 19 Oct 2021 13:11:23 +0000 (15:11 +0200)]
Extend documentation

2 years agoChangelog entry
Martin Kronbichler [Tue, 12 Oct 2021 13:10:08 +0000 (15:10 +0200)]
Changelog entry

2 years agoNew test case
Martin Kronbichler [Tue, 12 Oct 2021 13:09:53 +0000 (15:09 +0200)]
New test case

2 years agoEnable PreconditionChebyshev to update a sub-range of vector entries
Martin Kronbichler [Tue, 12 Oct 2021 13:09:40 +0000 (15:09 +0200)]
Enable PreconditionChebyshev to update a sub-range of vector entries

2 years agoRename Functions::LevelSet -> Functions::SignedDistance 12846/head
Peter Munch [Tue, 19 Oct 2021 07:34:47 +0000 (09:34 +0200)]
Rename Functions::LevelSet -> Functions::SignedDistance

2 years agoFix order of vertices of wedges in ReferenceCell::vertex 12845/head
Peter Munch [Tue, 19 Oct 2021 06:39:49 +0000 (08:39 +0200)]
Fix order of vertices of wedges in ReferenceCell::vertex

2 years agoMerge pull request #12843 from bangerth/refcell
Peter Munch [Tue, 19 Oct 2021 06:00:42 +0000 (08:00 +0200)]
Merge pull request #12843 from bangerth/refcell

Systematize vertex construction.

2 years agoMerge pull request #12841 from bangerth/dif2
Peter Munch [Tue, 19 Oct 2021 05:59:35 +0000 (07:59 +0200)]
Merge pull request #12841 from bangerth/dif2

Simplify some code by using std::any_of().

2 years agoSystematize vertex construction. 12843/head
Wolfgang Bangerth [Tue, 19 Oct 2021 01:56:00 +0000 (19:56 -0600)]
Systematize vertex construction.

2 years agoMerge pull request #12811 from gfcas/doc_step_72
Wolfgang Bangerth [Mon, 18 Oct 2021 23:57:35 +0000 (17:57 -0600)]
Merge pull request #12811 from gfcas/doc_step_72

Correction of comments in step-72

2 years agoSimplify some code by using std::any_of(). 12841/head
Wolfgang Bangerth [Mon, 18 Oct 2021 23:51:06 +0000 (17:51 -0600)]
Simplify some code by using std::any_of().

Also move the variables so initialized out of the if-branch in this
function because I want to use them also in the else-branch in a follow-up.

2 years agoMerge pull request #12837 from peterrum/QIterated_varying_subdivisions
David Wells [Mon, 18 Oct 2021 12:09:39 +0000 (08:09 -0400)]
Merge pull request #12837 from peterrum/QIterated_varying_subdivisions

QIterated: varying subdivisions

2 years agoQIterated: varying subdivisions 12837/head
Peter Munch [Sat, 16 Oct 2021 14:37:56 +0000 (16:37 +0200)]
QIterated: varying subdivisions

2 years agoMerge pull request #12840 from peterrum/hp_create_laplace_matrix
Peter Munch [Mon, 18 Oct 2021 04:49:49 +0000 (06:49 +0200)]
Merge pull request #12840 from peterrum/hp_create_laplace_matrix

Fix MatrixCreator::create_mass/laplace_matrix for hp

2 years agoFix MatrixCreator::create_mass/laplace_matrix for hp 12840/head
Peter Munch [Sun, 17 Oct 2021 19:37:51 +0000 (21:37 +0200)]
Fix MatrixCreator::create_mass/laplace_matrix for hp

2 years agoMerge pull request #12839 from drwells/use-more-std-array
Peter Munch [Sun, 17 Oct 2021 06:46:32 +0000 (08:46 +0200)]
Merge pull request #12839 from drwells/use-more-std-array

Use some more std::arrays.

2 years agoMerge pull request #12830 from tjhei/large-tria-checkpoint
David Wells [Sat, 16 Oct 2021 18:49:02 +0000 (14:49 -0400)]
Merge pull request #12830 from tjhei/large-tria-checkpoint

fix checkpointing for >4GB files

2 years agoUse some more std::arrays. 12839/head
David Wells [Sat, 16 Oct 2021 18:32:53 +0000 (14:32 -0400)]
Use some more std::arrays.

Incredibly, on my machine with max optimizations, valgrind complains about
unknown instructions with std::vector but does not with std::array.

2 years agoMerge pull request #12836 from peterrum/mg_transfer_global_coarsening_identity
Peter Munch [Sat, 16 Oct 2021 14:07:33 +0000 (16:07 +0200)]
Merge pull request #12836 from peterrum/mg_transfer_global_coarsening_identity

Fix determination of identity in MGTwoLevelTransfer

2 years agoFix determination of identity in MGTwoLevelTransfer 12836/head
Peter Munch [Fri, 15 Oct 2021 19:47:35 +0000 (21:47 +0200)]
Fix determination of identity in MGTwoLevelTransfer

2 years agoMerge pull request #12829 from peterrum/celldata_assert
Martin Kronbichler [Sat, 16 Oct 2021 10:51:50 +0000 (12:51 +0200)]
Merge pull request #12829 from peterrum/celldata_assert

Add assert to check the definition of CellData

2 years agoMerge pull request #12833 from bangerth/simplify
Martin Kronbichler [Sat, 16 Oct 2021 10:51:11 +0000 (12:51 +0200)]
Merge pull request #12833 from bangerth/simplify

Simplify a piece of code.

2 years agoMerge pull request #12834 from bangerth/assert
Martin Kronbichler [Sat, 16 Oct 2021 10:49:59 +0000 (12:49 +0200)]
Merge pull request #12834 from bangerth/assert

Add one, fix another assertion.

2 years agoMerge pull request #12835 from peterrum/mg_transfer_global_coarsening_include
Peter Munch [Fri, 15 Oct 2021 22:11:23 +0000 (00:11 +0200)]
Merge pull request #12835 from peterrum/mg_transfer_global_coarsening_include

Add include to mg_transfer_global_coarsening.h

2 years agoAdd include to mg_transfer_global_coarsening.h 12835/head
Peter Munch [Fri, 15 Oct 2021 19:15:11 +0000 (21:15 +0200)]
Add include to mg_transfer_global_coarsening.h

2 years agoAdd one, fix another assertion. 12834/head
Wolfgang Bangerth [Fri, 15 Oct 2021 17:28:37 +0000 (11:28 -0600)]
Add one, fix another assertion.

2 years agoSimplify a piece of code. 12833/head
Wolfgang Bangerth [Fri, 15 Oct 2021 17:28:04 +0000 (11:28 -0600)]
Simplify a piece of code.

2 years agoAdd assert to check the definition of CellData 12829/head
Peter Munch [Thu, 14 Oct 2021 17:13:48 +0000 (19:13 +0200)]
Add assert to check the definition of CellData

2 years agoMinor text updates to the step-49 gmsh discussion. 12822/head
Wolfgang Bangerth [Wed, 13 Oct 2021 17:42:22 +0000 (11:42 -0600)]
Minor text updates to the step-49 gmsh discussion.

2 years agoadjust variable name 12830/head
Timo Heister [Fri, 15 Oct 2021 14:52:35 +0000 (10:52 -0400)]
adjust variable name

2 years agoFix tests. 12825/head
Marc Fehling [Wed, 13 Oct 2021 20:55:53 +0000 (14:55 -0600)]
Fix tests.

2 years agoDo not communicate vertices automatically to p4est in debug mode.
Marc Fehling [Wed, 13 Oct 2021 20:21:09 +0000 (14:21 -0600)]
Do not communicate vertices automatically to p4est in debug mode.

2 years agoMerge pull request #12341 from konsim83/feature_p4est_find_partition
Peter Munch [Fri, 15 Oct 2021 05:26:28 +0000 (07:26 +0200)]
Merge pull request #12341 from konsim83/feature_p4est_find_partition

Feature p4est find partition - Find MPI ranks of point owners in distributed meshes

2 years agofix checkpointing for >4GB files
Timo Heister [Fri, 15 Oct 2021 03:05:53 +0000 (23:05 -0400)]
fix checkpointing for >4GB files

We incorrectly compute MPI_Offset for MPI IO for checkpointing using
SolutionTransfer using 32 bit indices, which means that files larger
than 4GB end up being corrupted.
This manifests in errors like

n error occurred in line <749> of file
<../source/distributed/tria_base.cc> in function
void dealii::parallel::DistributedTriangulationBase<dim,
spacedim>::load_attached_data(unsigned int, unsigned int, unsigned int,
const string&, unsigned int, unsigned int) [with int dim = 3; int
spacedim = 3; std::string = std::__cxx11::basic_string<char>]
The violated condition was:
(cell_rel.second == parallel::DistributedTriangulationBase<dim,
spacedim>::CELL_PERSIST)

part of #12752

2 years agoMerge pull request #12827 from bangerth/reference-cell
Peter Munch [Thu, 14 Oct 2021 17:02:49 +0000 (19:02 +0200)]
Merge pull request #12827 from bangerth/reference-cell

Implement ReferenceCell::vertex().

2 years agoAdd a changelog entry. 12827/head
Wolfgang Bangerth [Wed, 13 Oct 2021 23:26:30 +0000 (17:26 -0600)]
Add a changelog entry.

2 years agoUse ReferenceCell::vertex() in two places.
Wolfgang Bangerth [Wed, 13 Oct 2021 23:26:30 +0000 (17:26 -0600)]
Use ReferenceCell::vertex() in two places.

2 years agoImplement ReferenceCell::vertex().
Wolfgang Bangerth [Wed, 13 Oct 2021 23:26:29 +0000 (17:26 -0600)]
Implement ReferenceCell::vertex().

2 years agoMerge pull request #12828 from bangerth/nvector
Peter Munch [Thu, 14 Oct 2021 06:20:19 +0000 (08:20 +0200)]
Merge pull request #12828 from bangerth/nvector

Implement functions within instead of outside a namespace.

2 years agoMerge pull request #12824 from bangerth/data-out-faces
Peter Munch [Thu, 14 Oct 2021 06:13:16 +0000 (08:13 +0200)]
Merge pull request #12824 from bangerth/data-out-faces

Make DataOutFaces work with simplex meshes.

2 years agoImplement functions within instead of outside a namespace. 12828/head
Wolfgang Bangerth [Thu, 14 Oct 2021 02:14:29 +0000 (20:14 -0600)]
Implement functions within instead of outside a namespace.

2 years agoAdd a changelog entry. 12824/head
Wolfgang Bangerth [Wed, 13 Oct 2021 20:57:00 +0000 (14:57 -0600)]
Add a changelog entry.

2 years agoAdd test.
Wolfgang Bangerth [Wed, 13 Oct 2021 20:54:55 +0000 (14:54 -0600)]
Add test.

2 years agoAvoid assertions on simplex meshes.
Wolfgang Bangerth [Wed, 13 Oct 2021 20:54:35 +0000 (14:54 -0600)]
Avoid assertions on simplex meshes.

2 years agoImplement communication-free owner rank search (p4est interface). 12341/head
Simon, Dr. Konrad [Sun, 23 May 2021 08:40:37 +0000 (10:40 +0200)]
Implement communication-free owner rank search (p4est interface).

2 years agoMerge pull request #12797 from gfcas/hp_kelly_1d_assert
Marc Fehling [Tue, 12 Oct 2021 23:57:57 +0000 (17:57 -0600)]
Merge pull request #12797 from gfcas/hp_kelly_1d_assert

hp Version of KellyErrorEstimator<1,spacedim>

2 years agoMerge pull request #12818 from kronbichler/remove_quadrature_formula_attribute
David Wells [Tue, 12 Oct 2021 19:08:57 +0000 (15:08 -0400)]
Merge pull request #12818 from kronbichler/remove_quadrature_formula_attribute

step-70: Remove quadrature_formula class attributes

2 years agoMerge pull request #12820 from gfcas/typos
Martin Kronbichler [Tue, 12 Oct 2021 18:59:51 +0000 (20:59 +0200)]
Merge pull request #12820 from gfcas/typos

Fix typos

2 years agoUpdate include/deal.II/hp/refinement.h 12820/head
Fabian Castelli [Tue, 12 Oct 2021 15:38:45 +0000 (17:38 +0200)]
Update include/deal.II/hp/refinement.h

Co-authored-by: Daniel Arndt <arndtd@ornl.gov>
2 years agoFix typo
Fabian Castelli [Tue, 12 Oct 2021 14:55:28 +0000 (16:55 +0200)]
Fix typo

2 years agoFix typos
Fabian Castelli [Tue, 12 Oct 2021 14:53:19 +0000 (16:53 +0200)]
Fix typos

2 years agostep-70: Remove quadrature_formula class attributes 12818/head
Martin Kronbichler [Tue, 12 Oct 2021 09:02:01 +0000 (11:02 +0200)]
step-70: Remove quadrature_formula class attributes

2 years agoMerge pull request #12803 from peterrum/va_initializer_list
Martin Kronbichler [Tue, 12 Oct 2021 08:55:43 +0000 (10:55 +0200)]
Merge pull request #12803 from peterrum/va_initializer_list

VectorizedArray: accept std::initializer_list

2 years agoMerge pull request #12812 from gfcas/step72-quadrature
Martin Kronbichler [Tue, 12 Oct 2021 08:52:49 +0000 (10:52 +0200)]
Merge pull request #12812 from gfcas/step72-quadrature

step-72: Remove double quadrature_formula definition

2 years agoMerge pull request #12810 from peterrum/rpt_tighten
Martin Kronbichler [Tue, 12 Oct 2021 08:47:29 +0000 (10:47 +0200)]
Merge pull request #12810 from peterrum/rpt_tighten

Extend RepartitioningPolicyTools::DefaultPolicy

2 years agoAdd changelog entry 12797/head
Fabian Castelli [Tue, 12 Oct 2021 08:32:50 +0000 (10:32 +0200)]
Add changelog entry

2 years agoKellyErrorEstimator<1,spacedim> with hp
Fabian Castelli [Mon, 11 Oct 2021 14:37:42 +0000 (16:37 +0200)]
KellyErrorEstimator<1,spacedim> with hp

2 years agoComment correction in step-77 12811/head
Fabian Castelli [Tue, 12 Oct 2021 07:56:38 +0000 (09:56 +0200)]
Comment correction in step-77

2 years agoComment correction in step-15
Fabian Castelli [Tue, 12 Oct 2021 07:55:24 +0000 (09:55 +0200)]
Comment correction in step-15

2 years agoRemove double quadrature_formula definition 12812/head
Fabian Castelli [Fri, 8 Oct 2021 09:33:08 +0000 (11:33 +0200)]
Remove double quadrature_formula definition

2 years agoCorrection of comments in step-72
Fabian Castelli [Fri, 8 Oct 2021 08:48:22 +0000 (10:48 +0200)]
Correction of comments in step-72

2 years agoVectorizedArray: accept std::initializer_list 12803/head
Peter Munch [Fri, 8 Oct 2021 05:49:38 +0000 (07:49 +0200)]
VectorizedArray: accept std::initializer_list

2 years agoExtend RepartitioningPolicyTools::DefaultPolicy 12810/head
Peter Munch [Sat, 9 Oct 2021 17:40:44 +0000 (19:40 +0200)]
Extend RepartitioningPolicyTools::DefaultPolicy

2 years agoMerge pull request #12808 from bangerth/82
Matthias Maier [Sat, 9 Oct 2021 02:06:51 +0000 (21:06 -0500)]
Merge pull request #12808 from bangerth/82

Link step-82 into the tutorial page.

2 years agoLink step-82 into the tutorial page. 12808/head
Wolfgang Bangerth [Fri, 8 Oct 2021 21:42:00 +0000 (15:42 -0600)]
Link step-82 into the tutorial page.

2 years agoMerge pull request #12806 from tjhei/step-49-followup
Matthias Maier [Fri, 8 Oct 2021 18:23:07 +0000 (13:23 -0500)]
Merge pull request #12806 from tjhei/step-49-followup

some step-49 follow-ups

2 years agosome step-49 followups 12806/head
Timo Heister [Fri, 8 Oct 2021 16:11:25 +0000 (12:11 -0400)]
some step-49 followups


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