]>
https://gitweb.dealii.org/ - dealii.git/log
Timo Heister [Tue, 11 Jul 2023 20:03:42 +0000 (16:03 -0400)]
tests/examples/ fix script return value
The target update_diffs fails for me without the explicit ``exit 0``
Daniel Arndt [Tue, 11 Jul 2023 19:27:56 +0000 (15:27 -0400)]
Merge pull request #15717 from lethe-cfd/fix_step_68_perf_warnings
Daniel Arndt [Tue, 11 Jul 2023 19:27:01 +0000 (15:27 -0400)]
Merge pull request #15718 from bergbauer/empty_quadrature
Bruno Blais [Tue, 11 Jul 2023 14:56:40 +0000 (10:56 -0400)]
Update tests/performance/timing_step_68.cc
Co-authored-by: Timo Heister <timo.heister@gmail.com>
Timo Heister [Tue, 11 Jul 2023 13:34:48 +0000 (09:34 -0400)]
Merge pull request #15716 from tamiko/remove_run_memcheck
CMake: remove support for ctest_memcheck() and run_memorycheck.cmake
Bruno Blais [Tue, 11 Jul 2023 11:58:38 +0000 (07:58 -0400)]
Fix warnings + remove uncessary mpi call
Maximilian Bergbauer [Tue, 11 Jul 2023 11:09:24 +0000 (13:09 +0200)]
empty() function for Quadrature
Martin Kronbichler [Tue, 11 Jul 2023 08:25:44 +0000 (10:25 +0200)]
Merge pull request #15687 from bangerth/consistency
Assert some basic mesh consistency notions.
Matthias Maier [Tue, 11 Jul 2023 05:59:32 +0000 (00:59 -0500)]
CMake: remove support for ctest_memcheck() and run_memorycheck.cmake
Instead of using valgrind it is much better to use compiler sanitizers
such as "-fsanitize=address,undefined,leak" with clang.
Martin Kronbichler [Tue, 11 Jul 2023 05:24:36 +0000 (07:24 +0200)]
Merge pull request #15709 from masterleinad/restrict_nox_tests
Restrict tests requiring NOX
Martin Kronbichler [Tue, 11 Jul 2023 05:23:38 +0000 (07:23 +0200)]
Merge pull request #15711 from bangerth/nox
Recommend NOX for building Trilinos.
Matthias Maier [Tue, 11 Jul 2023 04:34:46 +0000 (04:34 +0000)]
Merge pull request #15707 from tamiko/proper_cell_status_deprecation
Triangulation::CellStatus: provide proper compatibility type
Matthias Maier [Tue, 11 Jul 2023 00:02:48 +0000 (19:02 -0500)]
Triangulation::CellStatus: add compatibility identifiers for CellStatus::* members
Matthias Maier [Mon, 10 Jul 2023 20:40:35 +0000 (15:40 -0500)]
Triangulation: include compatibility CellStatus via using instead of defining a new enum
Matthias Maier [Mon, 10 Jul 2023 20:40:17 +0000 (15:40 -0500)]
CellStatus: provide old name aliases
Wolfgang Bangerth [Mon, 10 Jul 2023 22:36:50 +0000 (16:36 -0600)]
Recommend NOX for building Trilinos.
Daniel Arndt [Mon, 10 Jul 2023 21:55:24 +0000 (17:55 -0400)]
Restrict tests requiring NOX
Wolfgang Bangerth [Mon, 10 Jul 2023 20:40:33 +0000 (14:40 -0600)]
Merge pull request #15704 from masterleinad/guard_nox
Guard NOX support in include/deal.II/numerics/nonlinear.h
Daniel Arndt [Mon, 10 Jul 2023 17:28:32 +0000 (13:28 -0400)]
Merge pull request #15697 from RichardYCJ/doc_name_fix
Daniel Arndt [Mon, 10 Jul 2023 15:32:14 +0000 (11:32 -0400)]
Guard NOX support in include/deal.II/numerics/nonlinear.h
Daniel Arndt [Mon, 10 Jul 2023 14:37:46 +0000 (10:37 -0400)]
Merge pull request #15702 from pcafrica/fix_doc
Pasquale Africa [Mon, 10 Jul 2023 14:23:16 +0000 (14:23 +0000)]
Fix doc typo
Chengjiang Yin [Mon, 10 Jul 2023 14:20:28 +0000 (22:20 +0800)]
fix indent by check_indentation.sh
Chengjiang Yin [Mon, 10 Jul 2023 05:33:25 +0000 (13:33 +0800)]
remove some incorrect subtitle numbers
Chengjiang Yin [Mon, 10 Jul 2023 02:58:02 +0000 (10:58 +0800)]
Additional incorrect doxygen-style brackets
Chengjiang Yin [Sun, 9 Jul 2023 12:48:37 +0000 (20:48 +0800)]
Fix incorrect and missing doxygen-style name brackets
Daniel Arndt [Mon, 10 Jul 2023 12:41:21 +0000 (08:41 -0400)]
Merge pull request #15688 from bangerth/vsv-final
Martin Kronbichler [Mon, 10 Jul 2023 11:43:56 +0000 (13:43 +0200)]
Merge pull request #15700 from peterrum/instantiate_cellattacheddata
Instantiate CellAttachedData and CellAttachedDataSerializer
Martin Kronbichler [Mon, 10 Jul 2023 09:19:28 +0000 (11:19 +0200)]
Merge pull request #15699 from bangerth/c-str
Address more unnecessary calls to .c_str().
Peter Munch [Mon, 10 Jul 2023 08:37:37 +0000 (10:37 +0200)]
Instantiate CellAttachedData and CellAttachedDataSerializer
Martin Kronbichler [Mon, 10 Jul 2023 07:20:02 +0000 (09:20 +0200)]
Merge pull request #15695 from bangerth/manifold
Minor doc update in manifold.cc.
Wolfgang Bangerth [Sun, 9 Jul 2023 04:53:09 +0000 (22:53 -0600)]
Make input arguments 'const'.
Wolfgang Bangerth [Thu, 6 Jul 2023 13:16:34 +0000 (07:16 -0600)]
Add a changelog entry.
Wolfgang Bangerth [Thu, 6 Jul 2023 13:12:11 +0000 (07:12 -0600)]
Remove class VectorSpaceVector.
Wolfgang Bangerth [Mon, 10 Jul 2023 06:12:08 +0000 (00:12 -0600)]
Fix a misplaced forward declaration.
Wolfgang Bangerth [Mon, 10 Jul 2023 06:06:41 +0000 (00:06 -0600)]
Address more unnecessary calls to .c_str().
Wolfgang Bangerth [Mon, 10 Jul 2023 04:55:52 +0000 (22:55 -0600)]
Minor doc update in manifold.cc.
Matthias Maier [Mon, 10 Jul 2023 04:10:40 +0000 (04:10 +0000)]
Merge pull request #15694 from bangerth/fstream
std::[io]fstream can now deal with std::string for filenames.
Wolfgang Bangerth [Sun, 9 Jul 2023 23:00:24 +0000 (17:00 -0600)]
std::[io]fstream can now deal with std::string for filenames.
Peter Munch [Sun, 9 Jul 2023 18:57:14 +0000 (20:57 +0200)]
Merge pull request #15576 from pcafrica/serialization_tria_base
Unified interface for serializing triangulations.
Luca Heltai [Sun, 9 Jul 2023 17:05:28 +0000 (19:05 +0200)]
Merge pull request #15686 from bangerth/create-t
Make sure we always generate consistently oriented meshes.
Wolfgang Bangerth [Sun, 9 Jul 2023 01:18:13 +0000 (19:18 -0600)]
Assert some basic mesh consistency notions.
Matthias Maier [Sun, 9 Jul 2023 02:59:38 +0000 (02:59 +0000)]
Merge pull request #15610 from tjhei/taskflow-3.6.0
bundle taskflow 3.6.0
Matthias Maier [Sun, 9 Jul 2023 02:56:00 +0000 (02:56 +0000)]
Merge pull request #15652 from tamiko/update_github_runners
github: update linux runners
Wolfgang Bangerth [Sat, 8 Jul 2023 22:50:44 +0000 (16:50 -0600)]
Make sure we always generate consistently oriented meshes.
Matthias Maier [Sat, 8 Jul 2023 20:45:28 +0000 (20:45 +0000)]
Merge pull request #15684 from tamiko/master
CMake: avoid "binding to none" for performance tests
Daniel Arndt [Sat, 8 Jul 2023 19:47:48 +0000 (15:47 -0400)]
Merge pull request #15667 from bangerth/vsv-rwvector
Wolfgang Bangerth [Sat, 8 Jul 2023 18:17:35 +0000 (12:17 -0600)]
Merge pull request #15677 from sebproell/kinsol-custom-setup
KINSOL: allow for custom setup
Matthias Maier [Sat, 8 Jul 2023 14:39:42 +0000 (09:39 -0500)]
CMake: avoid "binding to none" for performance tests
It turns out that this change introduces a lot of noise. Let us thus not
override the mpi binding policy if we already run exclusively.
Peter Munch [Sat, 8 Jul 2023 12:43:12 +0000 (14:43 +0200)]
Merge pull request #15682 from bangerth/array
Replace use of C-style array by std::array.
Sebastian Proell [Fri, 7 Jul 2023 14:12:40 +0000 (16:12 +0200)]
KINSOL: allow for custom setup
Wolfgang Bangerth [Sat, 8 Jul 2023 06:26:06 +0000 (00:26 -0600)]
Replace use of C-style array by std::array in a second place.
Wolfgang Bangerth [Sat, 8 Jul 2023 06:21:13 +0000 (00:21 -0600)]
Replace use of C-style array by std::array.
Matthias Maier [Sat, 8 Jul 2023 04:40:45 +0000 (23:40 -0500)]
PythonWrappers: fall back to Release if Debug is unavailable
Matthias Maier [Wed, 5 Jul 2023 02:49:52 +0000 (21:49 -0500)]
github: linux/serial: sanitize python environment
Wolfgang Bangerth [Sat, 8 Jul 2023 05:20:42 +0000 (23:20 -0600)]
Merge pull request #15681 from gassmoeller/update_cmake_documentation
Update cmake variable documentation
Matthias Maier [Wed, 5 Jul 2023 02:36:17 +0000 (21:36 -0500)]
Quick tests: avoid -Wunused-variable
Matthias Maier [Tue, 4 Jul 2023 22:25:06 +0000 (17:25 -0500)]
github: reenable runners on push
Matthias Maier [Sat, 8 Jul 2023 03:22:22 +0000 (22:22 -0500)]
github: serial: increase output verbosity
Matthias Maier [Tue, 4 Jul 2023 22:14:13 +0000 (17:14 -0500)]
github: update intel oneapi runner
Matthias Maier [Tue, 4 Jul 2023 21:46:10 +0000 (16:46 -0500)]
github: update parallel runner
- rename to linux parallel debug
- also configure example and quick_tests
Matthias Maier [Tue, 4 Jul 2023 21:05:01 +0000 (16:05 -0500)]
github: update serial linux runner
- bump to Ubuntu 22.04
- enable examples and quick tests
Wolfgang Bangerth [Sat, 8 Jul 2023 04:11:12 +0000 (22:11 -0600)]
Merge pull request #15678 from peterrum/orienatation_simplex_dg
Fix face orientation
Rene Gassmoeller [Fri, 7 Jul 2023 23:41:39 +0000 (16:41 -0700)]
Update cmake variable documentation
Pasquale Africa [Tue, 4 Jul 2023 16:02:14 +0000 (16:02 +0000)]
Move CellAttachedDataSerializer to internal namespace
Pasquale Africa [Mon, 3 Jul 2023 19:51:46 +0000 (19:51 +0000)]
Deprecate Triangulation<dim, spacedim>::CellStatus
Pasquale Africa [Sun, 2 Jul 2023 21:18:57 +0000 (21:18 +0000)]
Implement DataTransfer for disabled MPI support
Pasquale Africa [Sat, 1 Jul 2023 19:08:49 +0000 (19:08 +0000)]
Move CellAttachedData and DataTransfer to Triangulation base class
Matthias Maier [Fri, 7 Jul 2023 23:06:47 +0000 (23:06 +0000)]
Merge pull request #15679 from bangerth/parallel
Use parallel::apply_to_subranges().
Wolfgang Bangerth [Fri, 7 Jul 2023 22:20:20 +0000 (16:20 -0600)]
Merge pull request #15671 from masterleinad/avoid_const_return_type
Avoid const return type in functions
Wolfgang Bangerth [Fri, 7 Jul 2023 22:19:29 +0000 (16:19 -0600)]
Merge pull request #15641 from masterleinad/even_more_clang_tidy
Fix some more clang-tidy findings
Wolfgang Bangerth [Fri, 7 Jul 2023 18:26:39 +0000 (12:26 -0600)]
Merge pull request #15672 from masterleinad/deprecated_implciit_conversions_of_masks
Introduce DEAL_II[_DEPRECATED_EARLY]_WITH_COMMENT
Wolfgang Bangerth [Fri, 7 Jul 2023 17:39:57 +0000 (11:39 -0600)]
Use parallel::apply_to_subranges().
Wolfgang Bangerth [Thu, 6 Jul 2023 13:03:40 +0000 (07:03 -0600)]
Remove reference to VectorSpaceVector from ReadWriteVector's documentation.
Daniel Arndt [Fri, 7 Jul 2023 17:31:32 +0000 (13:31 -0400)]
Fix tests
Peter Munch [Sun, 2 Jul 2023 01:22:27 +0000 (03:22 +0200)]
Fix face orientation
David Wells [Fri, 7 Jul 2023 13:49:20 +0000 (09:49 -0400)]
Merge pull request #15010 from sebproell/callable-member-function
Forward implementation of std::bind_front
David Wells [Fri, 7 Jul 2023 13:48:37 +0000 (09:48 -0400)]
Merge pull request #15675 from tamiko/adjust_test
Test examples/step-40: avoid std::cout race condition
Daniel Arndt [Fri, 7 Jul 2023 12:10:16 +0000 (08:10 -0400)]
Define DEAL_II_DEPRECATED_EARLY_WITH_COMMENT(x) for doxygen
Daniel Arndt [Thu, 6 Jul 2023 18:05:10 +0000 (14:05 -0400)]
Avoid const return type
Daniel Arndt [Fri, 7 Jul 2023 11:53:15 +0000 (07:53 -0400)]
Merge pull request #15666 from bangerth/vsv-la-vector
Daniel Arndt [Fri, 7 Jul 2023 11:52:22 +0000 (07:52 -0400)]
Merge pull request #15665 from masterleinad/compiler_versions_c++17
Sebastian Proell [Fri, 31 Mar 2023 15:47:37 +0000 (17:47 +0200)]
Forward implementation of std::bind_front
Matthias Maier [Fri, 7 Jul 2023 06:30:47 +0000 (01:30 -0500)]
examples/step-40: use check_solver_within_range with pcout ostream
Matthias Maier [Fri, 7 Jul 2023 06:29:53 +0000 (01:29 -0500)]
example_test.h: add ostream parameter for solver_within_range macro
Matthias Maier [Fri, 7 Jul 2023 06:23:05 +0000 (06:23 +0000)]
Merge pull request #15668 from bangerth/vsv-comm-pattern
Remove reference to VectorSpacevector from the documentation.
Wolfgang Bangerth [Thu, 6 Jul 2023 15:48:16 +0000 (09:48 -0600)]
Make an argument a const reference.
Wolfgang Bangerth [Thu, 6 Jul 2023 13:02:54 +0000 (07:02 -0600)]
Remove derivation of LinearAlgebra::distributed::Vector from VectorSpaceVector.
Wolfgang Bangerth [Fri, 7 Jul 2023 05:09:26 +0000 (23:09 -0600)]
Merge pull request #15674 from tamiko/switch_to_https
documentation: switch all hyperlinks in the documentation to https://
Matthias Maier [Fri, 7 Jul 2023 04:54:46 +0000 (04:54 +0000)]
Merge pull request #15673 from tamiko/fix_warning
matrix_free/fe_evaluation.h: avoid a warning with g++-13
Matthias Maier [Fri, 7 Jul 2023 03:57:58 +0000 (22:57 -0500)]
documentation: use https:// instead of http://
Matthias Maier [Fri, 7 Jul 2023 03:57:34 +0000 (22:57 -0500)]
documentation: use https:// instead of http://
Matthias Maier [Fri, 7 Jul 2023 03:57:18 +0000 (22:57 -0500)]
documentation: use https:// instead of http://
Matthias Maier [Fri, 7 Jul 2023 03:44:50 +0000 (22:44 -0500)]
documentation: update two urls
Matthias Maier [Fri, 7 Jul 2023 03:44:35 +0000 (22:44 -0500)]
documentation: use https:// instead of http://
Matthias Maier [Fri, 7 Jul 2023 00:10:16 +0000 (19:10 -0500)]
remove redundant else branch
Daniel Arndt [Thu, 6 Jul 2023 21:43:52 +0000 (17:43 -0400)]
Deprecate implicit conversions from std::vector to ComponentMask and BlockMask
Matthias Maier [Thu, 6 Jul 2023 22:16:06 +0000 (17:16 -0500)]
matrix_free/fe_evaluation.h: avoid a warning with g++-13
g++-13 is a bit too eager to warn about an array bounds violation here
after its optimizer pass introduced a `__builtin_memset()`:
```
In file included from include/deal.II/matrix_free/operators.h:30,
from include/deal.II/numerics/vector_tools_project.templates.h:36,
from source/numerics/vector_tools_project_qpmf.cc:17:
In member function ‘void dealii::FEEvaluationBase<...>:
inlined from ‘void dealii::FEEvaluationBase<...>:
include/deal.II/matrix_free/fe_evaluation.h:3937:20: warning: ‘void* __builtin_memset(void*, int, long unsigned int)’ offset [20, 1020] is out of the bounds [0, 16] of object ‘dof_indices’ with type ‘std::array<unsigned int, 4>’ [-Warray-bounds=]
3937 | dof_indices[v] = numbers::invalid_unsigned_int;
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
which is a bit silly as the statement reads:
```
// implied Assert(n_filled_lanes <= n_lanes, ExcInternalError());
for (unsigned int v = n_filled_lanes; v < n_lanes; ++v)
dof_indices[v] = numbers::invalid_unsigned_int;
```
So instead let's simply initialize all elements of `dof_indices` to
`numbers::invalid_unsigned_int` via `std::fill` instead. I doubt that
this has much performance influence in practice as it gets replaced by a
`__builtin_memset()` right away.
Daniel Arndt [Thu, 6 Jul 2023 21:41:27 +0000 (17:41 -0400)]
Introduce DEAL_II[_DEPRECATED_EARLY]_WITH_COMMENT
Matthias Maier [Thu, 6 Jul 2023 19:34:39 +0000 (19:34 +0000)]
Merge pull request #15670 from tamiko/udpate_tester_names
Tests: update official tester names
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