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https://gitweb.dealii.org/ - dealii.git/log
Daniel Arndt [Thu, 10 Aug 2023 22:38:52 +0000 (18:38 -0400)]
Use iterative implementation for Utilities::pow
Marc Fehling [Tue, 8 Aug 2023 10:57:14 +0000 (04:57 -0600)]
Merge pull request #15852 from masterleinad/fix_petsc_complex
Fix compiling with PETSc with complex scalar type
Marc Fehling [Tue, 8 Aug 2023 10:57:01 +0000 (04:57 -0600)]
Merge pull request #15849 from stefanozampini/minor-snes
PETScWrappers:Align SNES with TS in comments and Jacobian handling
Timo Heister [Mon, 7 Aug 2023 19:54:09 +0000 (15:54 -0400)]
Merge pull request #15854 from peterrum/non_match_typo
Fix typo
Luca Heltai [Mon, 7 Aug 2023 17:26:23 +0000 (19:26 +0200)]
Merge pull request #15853 from tamiko/add_output_variant
Test petsc/petsc_ts_03: add output variant for 3.15.5
Peter Munch [Mon, 7 Aug 2023 14:57:45 +0000 (16:57 +0200)]
Fix typo
Matthias Maier [Mon, 7 Aug 2023 14:14:19 +0000 (14:14 +0000)]
Merge pull request #15794 from peterrum/mg_gc_edge_indices
Use MGTransferGlobalCoarsening also for local smoothing
Matthias Maier [Mon, 7 Aug 2023 13:38:46 +0000 (08:38 -0500)]
Test petsc/petsc_ts_03: add output variant for 3.15.5
Daniel Arndt [Mon, 7 Aug 2023 12:54:15 +0000 (08:54 -0400)]
Fix compiling with PETSc with complex scalar type
Daniel Arndt [Mon, 7 Aug 2023 12:42:54 +0000 (08:42 -0400)]
Merge pull request #15850 from bangerth/iwr
Wolfgang Bangerth [Mon, 7 Aug 2023 10:23:10 +0000 (04:23 -0600)]
No longer list IWR as the hosting institution.
Stefano Zampini [Mon, 7 Aug 2023 09:50:52 +0000 (11:50 +0200)]
PETScWrappers:Align SNES with TS in comments and Jacobian handling
Peter Munch [Sun, 6 Aug 2023 20:58:15 +0000 (22:58 +0200)]
Merge pull request #15817 from peterrum/as_dof_handler_level_iterator
Introduce Triangulation::as_dof_handler_level_iterator()
Peter Munch [Tue, 1 Aug 2023 17:09:53 +0000 (19:09 +0200)]
Introduce Triangulation::as_dof_handler_level_iterator()
David Wells [Sun, 6 Aug 2023 17:08:57 +0000 (13:08 -0400)]
Merge pull request #15787 from masterleinad/disallow_petsc_without_mpi
Require PETSc to be configured with MPI support
David Wells [Sun, 6 Aug 2023 17:03:28 +0000 (13:03 -0400)]
Merge pull request #15801 from bangerth/x3
Make GridGenerator::hyper_cube_with_cylindrical_hole<2>() more robust.
Wolfgang Bangerth [Sun, 6 Aug 2023 13:53:06 +0000 (07:53 -0600)]
Merge pull request #15816 from peterrum/contains_cell
Introduce Triangulation::contains_cell()
Matthias Maier [Sun, 6 Aug 2023 12:01:09 +0000 (12:01 +0000)]
Merge pull request #15845 from luca-heltai/stefanozampini/ts-alternative-output
petsc_ts_03: need to add an output for pre 3.20
Stefano Zampini [Sun, 6 Aug 2023 10:32:14 +0000 (13:32 +0300)]
need to add an output for pre 3.20
Martin Kronbichler [Sun, 6 Aug 2023 07:51:55 +0000 (09:51 +0200)]
Merge pull request #15841 from peterrum/compute_weights
MGTwoLevelTransfer: remove temporal vector in compute_weights()
Peter Munch [Tue, 1 Aug 2023 16:52:48 +0000 (18:52 +0200)]
Inroduce Triangulation::contains_cell()
Peter Munch [Sat, 15 Jul 2023 12:34:58 +0000 (14:34 +0200)]
Use MGTransferGlobalCoarsening also for local smoothing
Peter Munch [Sat, 5 Aug 2023 11:53:50 +0000 (13:53 +0200)]
MGTwoLevelTransfer: remove temporal vector in compute_weights()
Wolfgang Bangerth [Sat, 5 Aug 2023 10:28:09 +0000 (04:28 -0600)]
Avoid some uses of GeometryInfo.
Wolfgang Bangerth [Sat, 5 Aug 2023 10:26:00 +0000 (04:26 -0600)]
Avoid a compiler warning in a test.
Wolfgang Bangerth [Sat, 5 Aug 2023 10:25:46 +0000 (04:25 -0600)]
Make sure we don't match points on the perimeter of the domain as 'inside'.
Wolfgang Bangerth [Sat, 5 Aug 2023 10:12:27 +0000 (04:12 -0600)]
Fix a warning in a test.
Matthias Maier [Sat, 5 Aug 2023 03:59:36 +0000 (03:59 +0000)]
Merge pull request #15785 from luca-heltai/stefanozampini/ts-resize-and-hooks
PETScWrappers::TimeStepper support resizing while solving
Matthias Maier [Fri, 4 Aug 2023 04:27:33 +0000 (04:27 +0000)]
Merge pull request #15829 from drwells/fe-values-split-1
Split fe_values.h and fe_values.cc into three files each.
Matthias Maier [Fri, 4 Aug 2023 04:27:12 +0000 (04:27 +0000)]
Merge pull request #15832 from gassmoeller/optimize_step_68
Avoid memory allocations in step 68
Daniel Arndt [Thu, 3 Aug 2023 23:08:19 +0000 (19:08 -0400)]
Merge pull request #15805 from AbbBallout/VectorFunctionFromTensorFunction_gradient
Abbas Ballout [Fri, 28 Jul 2023 09:18:04 +0000 (11:18 +0200)]
Added gradient() evaluation to VectorFunctionFromTensorFunction
Added gradient() evaluation to VectorFunctionFromTensorFunction
Added gradient() evaluation to VectorFunctionFromTensorFunction
Added gradient() evaluation to VectorFunctionFromTensorFunction
Added gradient() evaluation to VectorFunctionFromTensorFunction
Added gradient() evaluation to VectorFunctionFromTensorFunction
Add test functions_08_gradient
Removed value() functions_08_gradient test
Added doc/news/changes/minor/
Update doc/news/changes/minor/20230730AbbasBallout
Co-authored-by: Daniel Arndt <arndtd@ornl.gov>
Update doc/news/changes/minor/20230730AbbasBallout
Co-authored-by: Daniel Arndt <arndtd@ornl.gov>
Update 20230730AbbasBallout doc minor changes
Fix test in base/functions_08_gradient.cc
David Wells [Mon, 10 Jul 2023 19:03:56 +0000 (15:03 -0400)]
Split fe_values.h and fe_values.cc into three files each.
In
367243a1614 (PR 15575) I removed SPLIT_INSTANTIATIONS_INDEX et al from
fe_values.cc. This was fine for -O2 but with -O3 -march=native this file now
takes several minutes to compile.
The majority of our compilation time here is in FEValuesViews - ultimately I'd
like to split that up. This commit performs one step towards splitting that up
by splitting up fe_values.h and corresponding source files into files for
FEValuesViews, FEValues, and FEValuesBase.
Rene Gassmoeller [Wed, 2 Aug 2023 21:33:29 +0000 (17:33 -0400)]
Merge pull request #15826 from peterrum/fix_test2
Fix a build warning
Rene Gassmoeller [Wed, 2 Aug 2023 20:43:36 +0000 (16:43 -0400)]
Avoid memory allocations in step 68
Peter Munch [Wed, 2 Aug 2023 18:47:38 +0000 (20:47 +0200)]
Fix test
Bruno Turcksin [Wed, 2 Aug 2023 14:50:57 +0000 (10:50 -0400)]
Merge pull request #15815 from peterrum/NoncontiguousPartitioner_import_from_ghosted_array
Daniel Arndt [Wed, 2 Aug 2023 12:56:04 +0000 (08:56 -0400)]
Merge pull request #15822 from peterrum/fix_test
Luca Heltai [Wed, 2 Aug 2023 11:16:31 +0000 (13:16 +0200)]
Merge pull request #14976 from peterrum/pack_rtree_of_indices_win
Peter Munch [Wed, 2 Aug 2023 10:04:54 +0000 (12:04 +0200)]
Fix test
Peter Munch [Tue, 1 Aug 2023 07:32:28 +0000 (09:32 +0200)]
Add NoncontiguousPartitioner::import_from_ghosted_array()
Bruno Turcksin [Wed, 2 Aug 2023 00:59:33 +0000 (20:59 -0400)]
Merge pull request #15802 from bangerth/x4
Luca Heltai [Tue, 1 Aug 2023 23:43:53 +0000 (01:43 +0200)]
Merge pull request #15811 from peterrum/simplices_find_cell
GridTools::find_active_cell_around_point() and find_all_active_cells_around_point() for simplices
Peter Munch [Sun, 30 Jul 2023 20:30:14 +0000 (22:30 +0200)]
GridTools::find_active_cell_around_point() and find_all_active_cells_around_point() for simplices
Peter Munch [Tue, 1 Aug 2023 18:12:22 +0000 (20:12 +0200)]
Merge pull request #15808 from peterrum/find_all_locally_owned_active_cells_around_point_cache_get_vertex_to_cell_map
Use Cache::get_vertex_to_cell_map() in GT::find_all_locally_owned_act…
Stefano Zampini [Tue, 1 Aug 2023 16:26:55 +0000 (18:26 +0200)]
PETScWrappers::TimeStepper: use empty function when not knowing how to deal with the exception
Stefano Zampini [Tue, 1 Aug 2023 16:16:46 +0000 (18:16 +0200)]
PETScWrappers::TimeStepper: make setup_xxx calls private
Peter Munch [Mon, 31 Jul 2023 13:37:38 +0000 (15:37 +0200)]
Use Cache::get_vertex_to_cell_map() in GT::find_all_locally_owned_active_cells_around_point()
Luca Heltai [Tue, 1 Aug 2023 15:26:58 +0000 (17:26 +0200)]
Merge pull request #15810 from peterrum/vertex_to_cell_map_check_hn
GT::vertex_to_cell_map(): check if triangulation is locally refined.
Stefano Zampini [Tue, 1 Aug 2023 14:43:50 +0000 (16:43 +0200)]
implement Wolfgang's comments
Peter Munch [Tue, 1 Aug 2023 10:40:57 +0000 (12:40 +0200)]
Merge pull request #15812 from luca-heltai/fix_hanging_nodes_in_parallel_nnmg
Add constrained entries to partitioner_coarse in NonNestedMG
Peter Munch [Tue, 1 Aug 2023 10:39:37 +0000 (12:39 +0200)]
Merge pull request #15649 from pcafrica/serialization_test
Test serialization for serial and shared triangulations
Peter Munch [Mon, 31 Jul 2023 13:55:14 +0000 (15:55 +0200)]
GT::vertex_to_cell_map(): check if tria has hn
Marco Feder [Mon, 31 Jul 2023 19:40:06 +0000 (19:40 +0000)]
Move create_coarse_partitioner to public
David Wells [Mon, 31 Jul 2023 19:24:52 +0000 (15:24 -0400)]
Merge pull request #15809 from peterrum/use_create_extended
Use BB::create_extended()
Peter Munch [Fri, 24 Mar 2023 21:08:22 +0000 (22:08 +0100)]
Add warning to pack_rtree_of_indices()
Marco Feder [Mon, 31 Jul 2023 15:27:07 +0000 (15:27 +0000)]
Add test with locally refined distributed grids
Marco Feder [Mon, 31 Jul 2023 15:25:15 +0000 (15:25 +0000)]
Add constrained DoFs to locally relevant DoFs in non-nested MG
Peter Munch [Mon, 31 Jul 2023 13:45:56 +0000 (15:45 +0200)]
Use BB::create_extended()
Peter Munch [Sat, 29 Jul 2023 19:04:55 +0000 (21:04 +0200)]
Merge pull request #15752 from peterrum/gc_init_MGConstrainedDoFs
MGTransferGlobalCoarsening: initialize with MGConstrainedDoFs
Peter Munch [Sat, 15 Jul 2023 12:34:58 +0000 (14:34 +0200)]
MGTransferGlobalCoarsening: initialize with MGConstrainedDoFs
Peter Munch [Thu, 27 Jul 2023 04:57:30 +0000 (06:57 +0200)]
Merge pull request #15793 from peterrum/interpolate_to_mg_zero
`MGTransferMF::interpolate_to_mg()`: zero out ghost values
Wolfgang Bangerth [Wed, 26 Jul 2023 18:23:07 +0000 (12:23 -0600)]
Make GridGenerator::hyper_cube_with_cylindrical_hole<2>() more robust.
Peter Munch [Wed, 26 Jul 2023 20:41:40 +0000 (22:41 +0200)]
Merge pull request #15800 from peterrum/ac_warning
AffineConstraints: fix warnings
Peter Munch [Tue, 25 Jul 2023 21:42:59 +0000 (23:42 +0200)]
MGTransferMF::interpolate_to_mg(): zero out ghost values
Wolfgang Bangerth [Wed, 26 Jul 2023 18:43:01 +0000 (12:43 -0600)]
Merge pull request #15799 from masterleinad/restrict_trilinos_sparse_matrix_mmult_01
trilinos_sparse_matrix_mmult needs EpetraExt
Wolfgang Bangerth [Wed, 26 Jul 2023 18:37:27 +0000 (12:37 -0600)]
Merge pull request #15797 from peterrum/add_mg_data_vector
DataOut::add_mg_data_vector(): copy vector and update ghost values
Wolfgang Bangerth [Mon, 24 Jul 2023 22:24:59 +0000 (16:24 -0600)]
Adjust expectations in a function.
Peter Munch [Wed, 26 Jul 2023 17:38:36 +0000 (19:38 +0200)]
AffineConstraints: fix warnings
Peter Munch [Wed, 26 Jul 2023 17:02:04 +0000 (19:02 +0200)]
Merge pull request #15798 from masterleinad/fix_block_vector_vector_assign
Fix block_vector_vector_assign
Daniel Arndt [Wed, 26 Jul 2023 15:07:27 +0000 (11:07 -0400)]
trilinos_sparse_matrix_mmult needs EpetraExt
Daniel Arndt [Wed, 26 Jul 2023 13:18:13 +0000 (09:18 -0400)]
Fix [complex_]block_vector_vector_assign
Peter Munch [Wed, 26 Jul 2023 08:09:41 +0000 (10:09 +0200)]
Merge pull request #15795 from bangerth/x2
Minor addition to the documentation of a GridTools function.
Peter Munch [Wed, 26 Jul 2023 08:08:29 +0000 (10:08 +0200)]
Merge pull request #15796 from bangerth/x1
Simplify code using structured bindings.
Peter Munch [Wed, 26 Jul 2023 08:04:56 +0000 (10:04 +0200)]
Remove VectorHelper
Peter Munch [Wed, 26 Jul 2023 07:10:11 +0000 (09:10 +0200)]
DataOut::add_mg_data_vector(): copy vector and update ghost values
Wolfgang Bangerth [Wed, 26 Jul 2023 02:01:10 +0000 (20:01 -0600)]
Merge pull request #15792 from peterrum/mg_level_object_clear
Add MGLevelObject::clear()
Wolfgang Bangerth [Mon, 24 Jul 2023 20:55:06 +0000 (14:55 -0600)]
Minor addition to the documentation of a GridTools function.
Wolfgang Bangerth [Mon, 24 Jul 2023 20:56:49 +0000 (14:56 -0600)]
Simplify code using structured bindings.
Peter Munch [Tue, 25 Jul 2023 21:02:00 +0000 (23:02 +0200)]
Add MGLevelObject::clear()
Peter Munch [Tue, 25 Jul 2023 20:46:15 +0000 (22:46 +0200)]
Merge pull request #15791 from masterleinad/fix_timing_step_37
Fix timing_step_37.cc
Daniel Arndt [Tue, 25 Jul 2023 19:53:05 +0000 (15:53 -0400)]
Fix timing_step_37.cc
Martin Kronbichler [Tue, 25 Jul 2023 07:30:07 +0000 (09:30 +0200)]
Merge pull request #15784 from peterrum/MGTransferMG
Replace MGTransferMG usages in tests/matrix_free
Stefano Zampini [Mon, 24 Jul 2023 22:08:14 +0000 (01:08 +0300)]
PETScWrappers::TimeStepper: add missing tests for callbacks
Stefano Zampini [Mon, 24 Jul 2023 22:04:50 +0000 (01:04 +0300)]
PETScWrappers::TimeStepper: cannot change the pointers to the matrices
use MatCopy instead (just to make sure....)
Stefano Zampini [Mon, 24 Jul 2023 20:38:29 +0000 (23:38 +0300)]
PETScWrappers::TimeStepper: Fix for older versions of PETSc
Daniel Arndt [Mon, 24 Jul 2023 12:55:06 +0000 (08:55 -0400)]
Require PETSc to be configured with MPI support
Matthias Maier [Mon, 24 Jul 2023 06:32:39 +0000 (06:32 +0000)]
Merge pull request #15783 from bangerth/_t
More work to replace std::*::type by std::*_t.
Matthias Maier [Mon, 24 Jul 2023 06:30:39 +0000 (06:30 +0000)]
Merge pull request #15781 from bangerth/no-mpi
Allow compilation with PETSc but without MPI.
Matthias Maier [Mon, 24 Jul 2023 06:29:55 +0000 (06:29 +0000)]
Merge pull request #15756 from tamiko/test_draft_prs
github: run all github actions on draft PRs as well
Wolfgang Bangerth [Sun, 23 Jul 2023 02:44:32 +0000 (20:44 -0600)]
Prefer std::remove_*_t over std::remove_*::type.
Stefano Zampini [Sun, 23 Jul 2023 10:07:37 +0000 (12:07 +0200)]
PETScWrappers::TimeStepper support resizing while solving
add hooks to completely support deal.II style
improve documentation
Peter Munch [Sun, 23 Jul 2023 09:24:11 +0000 (11:24 +0200)]
Merge pull request #15782 from peterrum/solution_copy_indices_global_mine
MGLevelGlobalTransfer: remove unused variables
Peter Munch [Sun, 23 Jul 2023 08:22:24 +0000 (10:22 +0200)]
Replace MGTransferMG usages in tests/matrix_free
Peter Munch [Sat, 22 Jul 2023 21:54:21 +0000 (23:54 +0200)]
MGLevelGlobalTransfer: remove unused variables
Wolfgang Bangerth [Sun, 23 Jul 2023 02:39:50 +0000 (20:39 -0600)]
Prefer std::conditional_t over std::conditional::type.
Wolfgang Bangerth [Sun, 23 Jul 2023 02:36:40 +0000 (20:36 -0600)]
Prefer std::make_(un)signed_t over std::make_(un)signed::type.
Matthias Maier [Sat, 22 Jul 2023 23:36:39 +0000 (23:36 +0000)]
Merge pull request #15753 from peterrum/af_merge_number
AffineConstraints::merge(): allow mixed numbers
Matthias Maier [Sat, 22 Jul 2023 23:35:23 +0000 (23:35 +0000)]
Merge pull request #15750 from peterrum/MGTransferMatrixFree_spacedim
MGTransferMatrixFree: remove unused template argument
Matthias Maier [Sat, 22 Jul 2023 22:56:34 +0000 (22:56 +0000)]
Merge pull request #15779 from peterrum/mf_kokkos_performance
Small modifications to performance/timing_matrix_free_kokkos
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