]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
8 years agoJust a couple of minor comment updates. 1662/head
Wolfgang Bangerth [Wed, 23 Sep 2015 22:22:12 +0000 (17:22 -0500)]
Just a couple of minor comment updates.

8 years agoMerge pull request #1659 from Rombur/fix_petsc_readwritevector
Wolfgang Bangerth [Wed, 23 Sep 2015 17:57:33 +0000 (12:57 -0500)]
Merge pull request #1659 from Rombur/fix_petsc_readwritevector

Fix a bug with petsc in readwritevector.

8 years agoFix a bug with petsc in readwritevector. 1659/head
Bruno Turcksin [Wed, 23 Sep 2015 17:55:37 +0000 (12:55 -0500)]
Fix a bug with petsc in readwritevector.

9 years agoMerge pull request #1650 from kronbichler/multigrid_for_parallel_vector
Martin Kronbichler [Wed, 23 Sep 2015 15:37:09 +0000 (17:37 +0200)]
Merge pull request #1650 from kronbichler/multigrid_for_parallel_vector

Multigrid for parallel vector

9 years agoEnable using MatrixFree and multigrid together in parallel, including test 1650/head
Martin Kronbichler [Tue, 22 Sep 2015 17:15:10 +0000 (19:15 +0200)]
Enable using MatrixFree and multigrid together in parallel, including test

9 years agoList change
Martin Kronbichler [Tue, 22 Sep 2015 16:19:23 +0000 (18:19 +0200)]
List change

9 years agoEnable MGTransferPrebuilt with parallel::distributed::Vector and Trilinos.
Martin Kronbichler [Tue, 22 Sep 2015 16:17:07 +0000 (18:17 +0200)]
Enable MGTransferPrebuilt with parallel::distributed::Vector and Trilinos.
Fix MGTransfer for 64 bit indices (and computations beyond 32 bit).

9 years agoCompute multigrid dof handler also for distributed policy 3D
Martin Kronbichler [Tue, 22 Sep 2015 16:15:54 +0000 (18:15 +0200)]
Compute multigrid dof handler also for distributed policy 3D

9 years agoAvoid setting the constant mode as a right hand side
Martin Kronbichler [Sat, 15 Aug 2015 08:46:57 +0000 (10:46 +0200)]
Avoid setting the constant mode as a right hand side
(works also in distributed computation case)
Adjust tolerance and update test

9 years agoMerge pull request #1514 from Rombur/new-vector-interfaces
Wolfgang Bangerth [Wed, 23 Sep 2015 11:23:32 +0000 (06:23 -0500)]
Merge pull request #1514 from Rombur/new-vector-interfaces

New vector interfaces

9 years agoMerge pull request #1654 from maieneuro/doc_fix
Martin Kronbichler [Wed, 23 Sep 2015 07:47:30 +0000 (09:47 +0200)]
Merge pull request #1654 from maieneuro/doc_fix

removed no-longer-applicable comment in FE_Nedelec

9 years agoremoved no-longer-applicable comment in FE_Nedelec 1654/head
Maien Hamed [Wed, 23 Sep 2015 07:29:45 +0000 (09:29 +0200)]
removed no-longer-applicable comment in FE_Nedelec

9 years agoImprove documentation. 1514/head
Bruno Turcksin [Wed, 23 Sep 2015 00:27:06 +0000 (19:27 -0500)]
Improve documentation.

9 years agoMerge pull request #1653 from bangerth/fix-test-13
Matthias Maier [Tue, 22 Sep 2015 21:43:17 +0000 (16:43 -0500)]
Merge pull request #1653 from bangerth/fix-test-13

Fix output of a test.

9 years agoFix output of a test. 1653/head
Wolfgang Bangerth [Tue, 22 Sep 2015 21:31:26 +0000 (16:31 -0500)]
Fix output of a test.

The output differs only in non-essential ways.

9 years agoMerge pull request #1649 from kronbichler/fix_periodic_bc
Matthias Maier [Tue, 22 Sep 2015 18:29:52 +0000 (13:29 -0500)]
Merge pull request #1649 from kronbichler/fix_periodic_bc

Fix orientation of 1D periodic case

9 years agoMerge pull request #1639 from Rombur/tria_accessor
Bruno Turcksin [Tue, 22 Sep 2015 16:11:27 +0000 (11:11 -0500)]
Merge pull request #1639 from Rombur/tria_accessor

Add TriaAccessor<0,dim,spacedim>.

9 years agoImprove test for vertex_iterator. 1639/head
Bruno Turcksin [Tue, 22 Sep 2015 16:10:06 +0000 (11:10 -0500)]
Improve test for vertex_iterator.

9 years agoFix orientation of 1D periodic case 1649/head
Martin Kronbichler [Tue, 22 Sep 2015 16:04:22 +0000 (18:04 +0200)]
Fix orientation of 1D periodic case

9 years agoMerge pull request #1648 from kronbichler/master
Martin Kronbichler [Tue, 22 Sep 2015 15:47:21 +0000 (17:47 +0200)]
Merge pull request #1648 from kronbichler/master

Bug fixes and extensions for >4g dofs

9 years agoReplace MPI_BYTE by DEAL_II_DOF_INDEX_MPI_TYPE throughout partitioner 1648/head
Martin Kronbichler [Tue, 22 Sep 2015 15:27:12 +0000 (17:27 +0200)]
Replace MPI_BYTE by DEAL_II_DOF_INDEX_MPI_TYPE throughout partitioner

9 years agoMention changes
Martin Kronbichler [Tue, 22 Sep 2015 14:06:09 +0000 (16:06 +0200)]
Mention changes

9 years agoAvoid using DynamicSparsityPattern::iterator past the end of the row
Martin Kronbichler [Mon, 21 Sep 2015 17:26:17 +0000 (19:26 +0200)]
Avoid using DynamicSparsityPattern::iterator past the end of the row
It is way too slow for the parallel case because one needs to go over all indices, not only locally owned ones

Also fix several 64 bit bugs.

Improve performance of nonlocal graph of Trilinos matrix by not setting dummy entries on each processor

9 years agoFix bugs in partitioner for indices beyond 2^32.
Martin Kronbichler [Mon, 21 Sep 2015 17:24:58 +0000 (19:24 +0200)]
Fix bugs in partitioner for indices beyond 2^32.
Enable use of distributed vector with non-zero starting range.
Fix 64 bit bug in dof handler MG levels

9 years agoExtend model for compatible partitioners.
Martin Kronbichler [Sat, 12 Sep 2015 19:05:31 +0000 (21:05 +0200)]
Extend model for compatible partitioners.
Fix bug in operator=.

9 years agoMerge pull request #1627 from tamiko/tensor.h_cleanup_6
Wolfgang Bangerth [Tue, 22 Sep 2015 11:33:57 +0000 (06:33 -0500)]
Merge pull request #1627 from tamiko/tensor.h_cleanup_6

Tensor<rank, dim, Number> - remaining bits

9 years agoMerge pull request #1647 from jppelteret/fix_solver_selector_lin_op
Wolfgang Bangerth [Tue, 22 Sep 2015 11:32:51 +0000 (06:32 -0500)]
Merge pull request #1647 from jppelteret/fix_solver_selector_lin_op

Add vector_type typedef to mimic Solver class

9 years agoAdd vector_type typedef to mimic Solver class. 1647/head
Jean-Paul Pelteret [Tue, 22 Sep 2015 09:10:40 +0000 (11:10 +0200)]
Add vector_type typedef to mimic Solver class.

This definition is required to use the SolverSelector with
inverse_operator.

9 years agoChange interface of vertex_accessor and add test.
Bruno Turcksin [Mon, 21 Sep 2015 17:29:51 +0000 (12:29 -0500)]
Change interface of vertex_accessor and add test.

9 years agoMerge pull request #1645 from drwells/fix-doc-typos-4
Matthias Maier [Mon, 21 Sep 2015 15:01:04 +0000 (10:01 -0500)]
Merge pull request #1645 from drwells/fix-doc-typos-4

Fix some typos in the documentation, part 4.

9 years agoFix some typos. 1645/head
David Wells [Mon, 21 Sep 2015 14:53:43 +0000 (10:53 -0400)]
Fix some typos.

9 years agoMerge pull request #1631 from asartori86/enrich_product_type
Wolfgang Bangerth [Mon, 21 Sep 2015 12:43:54 +0000 (07:43 -0500)]
Merge pull request #1631 from asartori86/enrich_product_type

declaration of products with sacado

9 years agoadded sacado_product_type.h 1631/head
alberto sartori [Thu, 17 Sep 2015 16:32:31 +0000 (18:32 +0200)]
added sacado_product_type.h

9 years agoFix a typo 1627/head
Matthias Maier [Thu, 17 Sep 2015 18:07:16 +0000 (13:07 -0500)]
Fix a typo

9 years agoupdate tests
Matthias Maier [Thu, 17 Sep 2015 18:05:12 +0000 (13:05 -0500)]
update tests

9 years agoRename double contraction "contract" to "double_contract"
Matthias Maier [Thu, 17 Sep 2015 17:48:44 +0000 (12:48 -0500)]
Rename double contraction "contract" to "double_contract"

9 years agoConvert static_assert to Assert
Matthias Maier [Thu, 17 Sep 2015 17:47:54 +0000 (12:47 -0500)]
Convert static_assert to Assert

9 years agoTestsuite: Add a small test for contract<..,..>
Matthias Maier [Thu, 17 Sep 2015 05:49:01 +0000 (00:49 -0500)]
Testsuite: Add a small test for contract<..,..>

9 years agoupdate news/changes.h
Matthias Maier [Wed, 16 Sep 2015 22:43:53 +0000 (17:43 -0500)]
update news/changes.h

9 years agoTensor<rank,dim,Number>: Remove obsolete exception
Matthias Maier [Thu, 17 Sep 2015 05:02:48 +0000 (00:02 -0500)]
Tensor<rank,dim,Number>: Remove obsolete exception

9 years agoImplement a generic contract function for contraction of one or two indices
Matthias Maier [Thu, 17 Sep 2015 01:52:19 +0000 (20:52 -0500)]
Implement a generic contract function for contraction of one or two indices

9 years agoGeneralize "scalar_product", deprecate remaining functions
Matthias Maier [Wed, 16 Sep 2015 20:12:58 +0000 (15:12 -0500)]
Generalize "scalar_product", deprecate remaining functions

9 years agoMerge pull request #1642 from tjhei/grid_generator_warning
Wolfgang Bangerth [Mon, 21 Sep 2015 00:46:44 +0000 (19:46 -0500)]
Merge pull request #1642 from tjhei/grid_generator_warning

avoid warning in grid_generator

9 years agoavoid warning in grid_generator 1642/head
Timo Heister [Mon, 21 Sep 2015 00:23:17 +0000 (20:23 -0400)]
avoid warning in grid_generator

9 years agoMerge pull request #1641 from davydden/parpack_minor_fix
Matthias Maier [Sun, 20 Sep 2015 06:24:33 +0000 (01:24 -0500)]
Merge pull request #1641 from davydden/parpack_minor_fix

fix Parpack unit tests to output expected results when Parpack is tur…

9 years agofix Parpack unit tests to output expected results when Parpack is turned off 1641/head
Denis Davydov [Sun, 20 Sep 2015 05:56:10 +0000 (07:56 +0200)]
fix Parpack unit tests to output expected results when Parpack is turned off

9 years agoMerge pull request #1633 from QiaoLei-88/simplifyDistRefine
Timo Heister [Sat, 19 Sep 2015 01:41:37 +0000 (21:41 -0400)]
Merge pull request #1633 from QiaoLei-88/simplifyDistRefine

Simplify code for distributed grid refinement

9 years agoAdd TriaAccessor<0,dim,spacedim>.
Bruno Turcksin [Fri, 18 Sep 2015 22:09:12 +0000 (17:09 -0500)]
Add TriaAccessor<0,dim,spacedim>.

9 years agoMerge pull request #1638 from drwells/fix-doc-typos-3
Wolfgang Bangerth [Fri, 18 Sep 2015 19:57:24 +0000 (14:57 -0500)]
Merge pull request #1638 from drwells/fix-doc-typos-3

Fix some typos in the documentation, part 3.

9 years agoFix some typos in the documentation. 1638/head
David Wells [Fri, 18 Sep 2015 19:51:53 +0000 (15:51 -0400)]
Fix some typos in the documentation.

9 years agoMerge pull request #1637 from drwells/matrix-and-vector-tools-namespace-doc
Wolfgang Bangerth [Fri, 18 Sep 2015 18:48:11 +0000 (13:48 -0500)]
Merge pull request #1637 from drwells/matrix-and-vector-tools-namespace-doc

Refer to namespaces as namespaces, not classes.

9 years agoRefer to namespaces as namespaces, not classes. 1637/head
David Wells [Fri, 18 Sep 2015 18:33:36 +0000 (14:33 -0400)]
Refer to namespaces as namespaces, not classes.

In the past, MatrixCreator, MatrixTools, and VectorTools were classes,
not namespaces. This commit updates the documentation to correctly refer
to them as namespaces.

9 years agoMerge pull request #1636 from jperryhouts/improve_debugging
Wolfgang Bangerth [Fri, 18 Sep 2015 16:55:37 +0000 (11:55 -0500)]
Merge pull request #1636 from jperryhouts/improve_debugging

Improve error message if FiniteElement has not been initialized.

9 years agoImprove error message if FiniteElement has not been initialized. 1636/head
Jonathan Perry-Houts [Fri, 18 Sep 2015 16:28:42 +0000 (09:28 -0700)]
Improve error message if FiniteElement has not been initialized.

9 years agoMerge pull request #1635 from agrayver/new_test
Wolfgang Bangerth [Fri, 18 Sep 2015 16:05:54 +0000 (11:05 -0500)]
Merge pull request #1635 from agrayver/new_test

Add new tests for checking functionality on (non-)affine meshes

9 years agoAdd new tests 1635/head
Alexander Grayver [Fri, 18 Sep 2015 13:46:08 +0000 (15:46 +0200)]
Add new tests

9 years agouse same counting function for master and slave node in parallel::distributed::GridRe... 1633/head
Lei Qiao [Thu, 17 Sep 2015 22:18:13 +0000 (17:18 -0500)]
use same counting function for master and slave node in parallel::distributed::GridRefinement::refine_and_coarsen_fixed_fraction()

9 years agouse same counting function for master and slave node in parallel::distributed::GridRe...
Lei Qiao [Thu, 17 Sep 2015 22:06:39 +0000 (17:06 -0500)]
use same counting function for master and slave node in parallel::distributed::GridRefinement::refine_and_coarsen_fixed_number()

9 years agoMerge pull request #1146 from davydden/parpack_second_try
Matthias Maier [Thu, 17 Sep 2015 21:16:47 +0000 (16:16 -0500)]
Merge pull request #1146 from davydden/parpack_second_try

Parpack (second try)

9 years agoavoid using C++11 functions in arpack unit tests 1146/head
Denis Davydov [Thu, 17 Sep 2015 21:09:42 +0000 (23:09 +0200)]
avoid using C++11 functions in arpack unit tests

9 years agodisable PArpack if scalapack is present in Trilinos or PETSc link interface to avoid...
Denis Davydov [Thu, 17 Sep 2015 20:33:24 +0000 (22:33 +0200)]
disable PArpack if scalapack is present in Trilinos or PETSc link interface to avoid possible symbol clash

9 years agoPArpack: extend unit tests to check that we get correct eigenvectors
Denis Davydov [Thu, 17 Sep 2015 20:25:37 +0000 (22:25 +0200)]
PArpack: extend unit tests to check that we get correct eigenvectors

9 years agofix a bug in Arpack class related to wrong eigenvectors
Denis Davydov [Thu, 17 Sep 2015 20:16:31 +0000 (22:16 +0200)]
fix a bug in Arpack class related to wrong eigenvectors

Extend the unit test to check that we indeed have eigenvectors.

9 years agoMerge pull request #1632 from luca-heltai/fix-compilation
Matthias Maier [Thu, 17 Sep 2015 20:19:33 +0000 (15:19 -0500)]
Merge pull request #1632 from luca-heltai/fix-compilation

Fix compilation on Mac

9 years agoFixed compilation on mac. 1632/head
Luca Heltai [Thu, 17 Sep 2015 20:04:13 +0000 (22:04 +0200)]
Fixed compilation on mac.

9 years agoMerge pull request #1597 from bangerth/further-FEValues-cleanups-34
Wolfgang Bangerth [Thu, 17 Sep 2015 19:46:40 +0000 (14:46 -0500)]
Merge pull request #1597 from bangerth/further-FEValues-cleanups-34

Further separate MappingQ, MappingQ1

9 years agoPArpack: reword comments in the unit tests
Denis Davydov [Thu, 17 Sep 2015 19:45:40 +0000 (21:45 +0200)]
PArpack: reword comments in the unit tests

9 years agoSimplify some code. 1597/head
Wolfgang Bangerth [Thu, 17 Sep 2015 17:42:14 +0000 (12:42 -0500)]
Simplify some code.

9 years agoUpdate some documentation.
Wolfgang Bangerth [Thu, 17 Sep 2015 14:50:31 +0000 (09:50 -0500)]
Update some documentation.

9 years agoMove more things out of MappingQ1 that don't need to be there.
Wolfgang Bangerth [Wed, 16 Sep 2015 22:14:07 +0000 (17:14 -0500)]
Move more things out of MappingQ1 that don't need to be there.

9 years agoUse the new variants of contract().
Wolfgang Bangerth [Wed, 16 Sep 2015 14:02:40 +0000 (09:02 -0500)]
Use the new variants of contract().

9 years agoUse covariant return types to avoid some casts.
Wolfgang Bangerth [Wed, 16 Sep 2015 12:24:40 +0000 (07:24 -0500)]
Use covariant return types to avoid some casts.

9 years agoBreak the dependence of MappingQ on MappingQ1.
Wolfgang Bangerth [Wed, 16 Sep 2015 11:45:03 +0000 (06:45 -0500)]
Break the dependence of MappingQ on MappingQ1.

9 years agoMove functions into MappingQGeneric.
Wolfgang Bangerth [Tue, 15 Sep 2015 21:01:17 +0000 (16:01 -0500)]
Move functions into MappingQGeneric.

9 years agoMove even more functions.
Wolfgang Bangerth [Tue, 15 Sep 2015 13:51:23 +0000 (08:51 -0500)]
Move even more functions.

This also allows to simplify the logic because we can use function
overloading rather than specializations.

9 years agoMove more functions into the .cc file only.
Wolfgang Bangerth [Tue, 15 Sep 2015 11:29:59 +0000 (06:29 -0500)]
Move more functions into the .cc file only.

9 years agoMove some code into the .cc file.
Wolfgang Bangerth [Mon, 14 Sep 2015 02:15:14 +0000 (21:15 -0500)]
Move some code into the .cc file.

This was an internal function -- no need to have it be part of the class declaration.

9 years agoRemove some code that appears to now be dead.
Wolfgang Bangerth [Mon, 14 Sep 2015 02:14:19 +0000 (21:14 -0500)]
Remove some code that appears to now be dead.

9 years agoRemove member variables now no longer necessary.
Wolfgang Bangerth [Sun, 13 Sep 2015 18:57:30 +0000 (13:57 -0500)]
Remove member variables now no longer necessary.

9 years agoMove compute_mapping_support_points() and friends to MappingQGeneric.
Wolfgang Bangerth [Sun, 13 Sep 2015 18:49:23 +0000 (13:49 -0500)]
Move compute_mapping_support_points() and friends to MappingQGeneric.

9 years agomove DEAL_II_ARPACK_WITH_PARPACK inside confih.h.in
Denis Davydov [Thu, 17 Sep 2015 19:35:53 +0000 (21:35 +0200)]
move DEAL_II_ARPACK_WITH_PARPACK inside confih.h.in

9 years agoMerge pull request #1621 from pesser/gnu-compiler-warning
Matthias Maier [Thu, 17 Sep 2015 18:08:26 +0000 (13:08 -0500)]
Merge pull request #1621 from pesser/gnu-compiler-warning

add -Woverloaded-virtual flag for gnu compiler

9 years agoMerge pull request #1626 from tcclevenger/add_svg_step2
Wolfgang Bangerth [Thu, 17 Sep 2015 15:28:52 +0000 (10:28 -0500)]
Merge pull request #1626 from tcclevenger/add_svg_step2

Use print_svg in step 2

9 years agoUse print_svg in step 2 1626/head
tcclevenger [Wed, 16 Sep 2015 19:51:09 +0000 (15:51 -0400)]
Use print_svg in step 2

9 years agoMerge pull request #1623 from nicolacavallini/codim_one_hyper_ball
Wolfgang Bangerth [Thu, 17 Sep 2015 12:02:16 +0000 (07:02 -0500)]
Merge pull request #1623 from nicolacavallini/codim_one_hyper_ball

added codim one hyper ball

9 years agoadded codim one hyper ball 1623/head
nicolacavallini [Wed, 16 Sep 2015 15:20:42 +0000 (17:20 +0200)]
added codim one hyper ball

added test

fixed indentation

typo

renamed to hyper sphere

added imagies to documentation

indentation

typos

9 years agoMerge pull request #1625 from drwells/remove-unused-update-flags
Wolfgang Bangerth [Thu, 17 Sep 2015 11:52:06 +0000 (06:52 -0500)]
Merge pull request #1625 from drwells/remove-unused-update-flags

Remove unimplemented UpdateFlags flags.

9 years agoMerge pull request #1629 from danshapero/indentation
Wolfgang Bangerth [Thu, 17 Sep 2015 11:34:36 +0000 (06:34 -0500)]
Merge pull request #1629 from danshapero/indentation

Indentation fix in gradient_interpolate

9 years agoMerge pull request #1630 from nicolacavallini/fix_indent
Wolfgang Bangerth [Thu, 17 Sep 2015 11:30:47 +0000 (06:30 -0500)]
Merge pull request #1630 from nicolacavallini/fix_indent

fixed indentation

9 years agofixed indentation 1630/head
nicolacavallini [Thu, 17 Sep 2015 11:09:00 +0000 (13:09 +0200)]
fixed indentation

9 years agoindentation of function_lib.cc and function_10.cc
Denis Davydov [Thu, 17 Sep 2015 09:54:39 +0000 (11:54 +0200)]
indentation of function_lib.cc and function_10.cc

9 years agoadded PArpack unit tests and a note to changes.h
Denis Davydov [Sun, 9 Aug 2015 21:08:08 +0000 (23:08 +0200)]
added PArpack unit tests and a note to changes.h

9 years agoadded PArpack eigensolver class
Denis Davydov [Sun, 9 Aug 2015 21:07:21 +0000 (23:07 +0200)]
added PArpack eigensolver class

9 years agoextend CMake scripts to find PArpack
Denis Davydov [Sun, 9 Aug 2015 21:06:30 +0000 (23:06 +0200)]
extend CMake scripts to find PArpack

9 years agoIndentation fix in gradient_interpolate 1629/head
danshapero [Thu, 17 Sep 2015 06:29:52 +0000 (23:29 -0700)]
Indentation fix in gradient_interpolate

9 years agoMerge branch 'griddata-gradient'
Matthias Maier [Wed, 16 Sep 2015 22:15:31 +0000 (17:15 -0500)]
Merge branch 'griddata-gradient'

Rebase and reapply #1348 to the master branch

9 years agogradient of InterpolatedTensorProductGridData
danshapero [Sun, 2 Aug 2015 23:10:33 +0000 (16:10 -0700)]
gradient of InterpolatedTensorProductGridData

9 years agoMerge pull request #1624 from tamiko/tensor.h_cleanup_5
Wolfgang Bangerth [Wed, 16 Sep 2015 20:56:47 +0000 (15:56 -0500)]
Merge pull request #1624 from tamiko/tensor.h_cleanup_5

Tensor<rank, dim, Number>: Generalize contract3 for arbitrary tensor ranks

9 years agoastyle 1624/head
Matthias Maier [Wed, 16 Sep 2015 20:13:31 +0000 (15:13 -0500)]
astyle

9 years agoRemove unimplemented UpdateFlags flags. 1625/head
David Wells [Wed, 16 Sep 2015 19:39:29 +0000 (15:39 -0400)]
Remove unimplemented UpdateFlags flags.

These two flags showed up in commit cfb5ac8b76df in October 2007 but
were never actually implemented.


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