]> https://gitweb.dealii.org/ - candi.git/log
candi.git
3 years agoUpdate user interaction 209/head
Fabian Castelli [Mon, 7 Jun 2021 16:45:08 +0000 (18:45 +0200)]
Update user interaction

3 years agoMerge pull request #208 from gfcas/update_readme_file
Uwe Köcher [Tue, 29 Jun 2021 08:33:34 +0000 (10:33 +0200)]
Merge pull request #208 from gfcas/update_readme_file

Updated readme file

3 years agoUpdate README.md 208/head
Uwe Köcher [Tue, 29 Jun 2021 08:32:16 +0000 (10:32 +0200)]
Update README.md

Co-authored-by: Timo Heister <timo.heister@gmail.com>
3 years agoMerge pull request #216 from koecher/gmsh-update
Uwe Köcher [Tue, 29 Jun 2021 08:28:13 +0000 (10:28 +0200)]
Merge pull request #216 from koecher/gmsh-update

gmsh removes comment

3 years agogmsh removes comment 216/head
Uwe Köcher [Tue, 29 Jun 2021 08:26:46 +0000 (10:26 +0200)]
gmsh removes comment

3 years agoMerge pull request #199 from gfcas/update_package_gmsh
Uwe Köcher [Tue, 29 Jun 2021 08:19:11 +0000 (10:19 +0200)]
Merge pull request #199 from gfcas/update_package_gmsh

Update package gmsh

3 years agoUpdated readme file
Fabian Castelli [Mon, 7 Jun 2021 10:31:54 +0000 (12:31 +0200)]
Updated readme file

3 years agoUpdate gmsh package 199/head
Fabian Castelli [Mon, 7 Jun 2021 09:35:33 +0000 (11:35 +0200)]
Update gmsh package

3 years agoMerge pull request #207 from tjhei/disable_cmake_mpi_cxx_compiler
Uwe Köcher [Mon, 28 Jun 2021 06:35:47 +0000 (08:35 +0200)]
Merge pull request #207 from tjhei/disable_cmake_mpi_cxx_compiler

3 years agoonly set MPI_CXX_COMPILER if requested 207/head
Timo Heister [Mon, 28 Jun 2021 01:43:02 +0000 (21:43 -0400)]
only set MPI_CXX_COMPILER if requested

Setting the compiler wrapper in CMake instead of in CC and CXX is
recommended, but only works for recent CMake versions (one configuration
I tested requires CMake 3.20 for the intel compiler).
With 9.3.1 deal.II supports setting CXX=mpicxx again, so only do the
above when a setting in candi.cfg is specified.
Works around #202
and fixes feature introduced in #159

3 years agoMerge pull request #206 from gfcas/ignore-file
Uwe Köcher [Fri, 25 Jun 2021 12:21:10 +0000 (14:21 +0200)]
Merge pull request #206 from gfcas/ignore-file

Remove candi dirs from .gitignore

3 years agoRemove candi dirs from .gitignore 206/head
Fabian Castelli [Fri, 25 Jun 2021 12:09:25 +0000 (14:09 +0200)]
Remove candi dirs from .gitignore

3 years agoMerge pull request #205 from gfcas/ignore-file
Uwe Köcher [Fri, 25 Jun 2021 08:09:17 +0000 (10:09 +0200)]
Merge pull request #205 from gfcas/ignore-file

Extend gitignore file

3 years agoMerge pull request #204 from gfcas/remove_strange_file
Uwe Köcher [Fri, 25 Jun 2021 08:08:02 +0000 (10:08 +0200)]
Merge pull request #204 from gfcas/remove_strange_file

Remove .single file

3 years agoExtend gitignore file 205/head
Fabian Castelli [Thu, 24 Jun 2021 19:41:57 +0000 (21:41 +0200)]
Extend gitignore file

3 years agoRemove .single file 204/head
Fabian Castelli [Mon, 7 Jun 2021 16:26:21 +0000 (18:26 +0200)]
Remove .single file

3 years agoMerge pull request #203 from gfcas/update_version_master
Timo Heister [Thu, 24 Jun 2021 17:42:30 +0000 (13:42 -0400)]
Merge pull request #203 from gfcas/update_version_master

Update VERSION file

3 years agoUpdate VERSION file 203/head
Fabian Castelli [Thu, 24 Jun 2021 13:01:24 +0000 (15:01 +0200)]
Update VERSION file

3 years agoMerge pull request #200 from koecher/update-authors
Timo Heister [Tue, 22 Jun 2021 12:12:53 +0000 (08:12 -0400)]
Merge pull request #200 from koecher/update-authors

updates AUTHOR file based on the current commits on master

3 years agoupdates AUTHOR file based on the current commits on master 200/head
Uwe Köcher [Tue, 22 Jun 2021 10:16:43 +0000 (12:16 +0200)]
updates AUTHOR file based on the current commits on master

3 years agoMerge pull request #198 from gfcas/add_package_symengine
Uwe Köcher [Mon, 21 Jun 2021 19:52:12 +0000 (21:52 +0200)]
Merge pull request #198 from gfcas/add_package_symengine

Add package symengine

3 years agoMerge pull request #197 from gfcas/replace_procs_by_jobs
Uwe Köcher [Mon, 21 Jun 2021 19:50:03 +0000 (21:50 +0200)]
Merge pull request #197 from gfcas/replace_procs_by_jobs

Replace option --PROCS by --jobs and changes internal PROCS to JOBS variable consistently.

3 years agoReplace option --PROCS by --jobs 197/head
Fabian Castelli [Mon, 7 Jun 2021 17:20:42 +0000 (19:20 +0200)]
Replace option --PROCS by --jobs

3 years agoAdd package symengine 198/head
Fabian Castelli [Mon, 7 Jun 2021 15:21:29 +0000 (17:21 +0200)]
Add package symengine

3 years agoMerge pull request #194 from gfcas/add_package_ginkgo
Uwe Köcher [Mon, 21 Jun 2021 15:10:55 +0000 (17:10 +0200)]
Merge pull request #194 from gfcas/add_package_ginkgo

Add ginkgo package

3 years agoMerge pull request #195 from tjhei/master_dev
Uwe Köcher [Mon, 21 Jun 2021 15:05:25 +0000 (17:05 +0200)]
Merge pull request #195 from tjhei/master_dev

on the master branch always use dev deal.II version

3 years agoMerge pull request #192 from gfcas/update_package_trilinos
Uwe Köcher [Mon, 21 Jun 2021 14:56:01 +0000 (16:56 +0200)]
Merge pull request #192 from gfcas/update_package_trilinos

Update package trilinos

3 years agoMerge pull request #159 from tjhei/dealii_without_mpicxx
Uwe Köcher [Mon, 21 Jun 2021 14:48:49 +0000 (16:48 +0200)]
Merge pull request #159 from tjhei/dealii_without_mpicxx

disable CXX/CC for deal.II itself

3 years agoAdd ginkgo package 194/head
Fabian Castelli [Mon, 7 Jun 2021 09:17:10 +0000 (11:17 +0200)]
Add ginkgo package

3 years agoon the master branch always use dev deal.II version 195/head
Timo Heister [Sat, 19 Jun 2021 18:26:51 +0000 (14:26 -0400)]
on the master branch always use dev deal.II version

it makes sense to test the latest deal.II master version on the candi
master branch (in contrast to the 9.x branches)

3 years agoUpdate superlu_dist package 192/head
Fabian Castelli [Mon, 7 Jun 2021 11:06:32 +0000 (13:06 +0200)]
Update superlu_dist package

3 years agoUpdate trilinos confopts according to reported issue
Fabian Castelli [Mon, 7 Jun 2021 11:03:18 +0000 (13:03 +0200)]
Update trilinos confopts according to reported issue

3 years agoUpdate trilinos package
Fabian Castelli [Mon, 7 Jun 2021 10:47:58 +0000 (12:47 +0200)]
Update trilinos package

3 years agodisable CXX/CC for deal.II itself 159/head
Timo Heister [Wed, 6 Jan 2021 20:34:47 +0000 (15:34 -0500)]
disable CXX/CC for deal.II itself

As described in the comment, it is not ideal to set CXX/CC.

3 years agoUpdate checksum verification (#187)
Fabian Castelli [Thu, 17 Jun 2021 21:06:03 +0000 (23:06 +0200)]
Update checksum verification (#187)

* Update checksum verification

* Minor corrections

3 years agoMerge pull request #189 from gfcas/remove_stable_build_option
Uwe Köcher [Thu, 17 Jun 2021 18:30:21 +0000 (20:30 +0200)]
Merge pull request #189 from gfcas/remove_stable_build_option

Remove STABLE_BUILD option

3 years agoCorrectly checkout the desired version for git repositories 189/head
Fabian Castelli [Thu, 17 Jun 2021 16:56:55 +0000 (18:56 +0200)]
Correctly checkout the desired version for git repositories

3 years agoRemove STABLE_BUILD option
Fabian Castelli [Sat, 5 Jun 2021 12:09:21 +0000 (14:09 +0200)]
Remove STABLE_BUILD option

3 years agoMerge pull request #183 from gfcas/deal_ii_confopts
Timo Heister [Thu, 17 Jun 2021 13:57:16 +0000 (09:57 -0400)]
Merge pull request #183 from gfcas/deal_ii_confopts

Rename to DEAL_II_CONFOPTS

3 years agoRename to DEAL_II_CONFOPTS 183/head
Fabian Castelli [Fri, 28 May 2021 10:46:58 +0000 (12:46 +0200)]
Rename to DEAL_II_CONFOPTS

3 years agoAdd option to run tests after installation (#179)
Fabian Castelli [Thu, 27 May 2021 10:33:39 +0000 (12:33 +0200)]
Add option to run tests after installation (#179)

* Add option to run tests after installation

* Change default value to OFF

3 years agoMerge pull request #180 from gfcas/readme
Uwe Köcher [Thu, 27 May 2021 09:06:44 +0000 (11:06 +0200)]
Merge pull request #180 from gfcas/readme

Update readme

3 years agoMerge pull request #182 from gfcas/instant_clean_option
Uwe Köcher [Thu, 27 May 2021 09:01:50 +0000 (11:01 +0200)]
Merge pull request #182 from gfcas/instant_clean_option

Add instant clean up option

3 years agoUnification ON|OFF (#176)
Fabian Castelli [Thu, 27 May 2021 08:56:55 +0000 (10:56 +0200)]
Unification ON|OFF (#176)

* Option CLEAN_BUILD

* Option native optimizations

* Option build examples

* Option stable build

* Update comments

3 years agoAdd GSL 2.6 (#178)
Fabian Castelli [Thu, 27 May 2021 08:47:25 +0000 (10:47 +0200)]
Add GSL 2.6 (#178)

* Add GSL

* Add to package list in cfg file

* Remove multiple newlines

* Fix typo

* Update from koecher

3 years agoAdd instant clean up option 182/head
Fabian Castelli [Wed, 26 May 2021 16:47:52 +0000 (18:47 +0200)]
Add instant clean up option

3 years agoMerge pull request #175 from gfcas/update_cmake
Uwe Köcher [Wed, 26 May 2021 10:41:28 +0000 (12:41 +0200)]
Merge pull request #175 from gfcas/update_cmake

Update cmake to version 3.16.3

3 years agoUpdate readme 180/head
Fabian Castelli [Tue, 25 May 2021 18:46:35 +0000 (20:46 +0200)]
Update readme

3 years agoUpdate cmake to version 3.16.3 175/head
Fabian Castelli [Tue, 25 May 2021 17:26:37 +0000 (19:26 +0200)]
Update cmake to version 3.16.3

3 years agoMerge pull request #173 from gfcas/dealii_examples_option
Uwe Köcher [Thu, 20 May 2021 07:44:04 +0000 (09:44 +0200)]
Merge pull request #173 from gfcas/dealii_examples_option

Option whether to build dealii examples

3 years agoMerge pull request #172 from gfcas/update_arpack
Uwe Köcher [Thu, 20 May 2021 07:22:10 +0000 (09:22 +0200)]
Merge pull request #172 from gfcas/update_arpack

Update to latest arpack version 3.8.0

3 years agoOption whether to build dealii examples 173/head
Fabian Castelli [Wed, 19 May 2021 14:30:48 +0000 (16:30 +0200)]
Option whether to build dealii examples

3 years agoUpdate to latest arpack version 3.8.0 172/head
Fabian Castelli [Wed, 19 May 2021 13:32:03 +0000 (15:32 +0200)]
Update to latest arpack version 3.8.0

3 years agoMerge pull request #150 from tjhei/trilinos_mkl
Timo Heister [Thu, 13 May 2021 15:35:40 +0000 (11:35 -0400)]
Merge pull request #150 from tjhei/trilinos_mkl

fix trilinos tpetra when using intel MKL

3 years agoMerge pull request #170 from gfcas/skip_prompts
Timo Heister [Thu, 6 May 2021 19:50:13 +0000 (15:50 -0400)]
Merge pull request #170 from gfcas/skip_prompts

Add option to skip prompts

3 years agoShort documentation of skip option 170/head
Fabian [Thu, 6 May 2021 07:43:56 +0000 (09:43 +0200)]
Short documentation of skip option

3 years agoAdd option to skip prompts
Fabian [Thu, 6 May 2021 07:05:17 +0000 (09:05 +0200)]
Add option to skip prompts

3 years agoMerge pull request #145 from tjhei/remove_nanoflann
Uwe Köcher [Tue, 6 Apr 2021 15:53:05 +0000 (17:53 +0200)]
Merge pull request #145 from tjhei/remove_nanoflann

remove nanoflann

3 years agoMerge pull request #166 from tjhei/netcdf
Uwe Köcher [Tue, 6 Apr 2021 15:52:44 +0000 (17:52 +0200)]
Merge pull request #166 from tjhei/netcdf

add netcdf

3 years agoMerge pull request #164 from koecher/guess-platform
Uwe Köcher [Tue, 6 Apr 2021 15:49:35 +0000 (17:49 +0200)]
Merge pull request #164 from koecher/guess-platform

Guess platform

3 years agoMerge pull request #165 from tjhei/muparser
Uwe Köcher [Wed, 27 Jan 2021 12:36:05 +0000 (13:36 +0100)]
Merge pull request #165 from tjhei/muparser

add muparser as separate package

3 years agoadd netcdf 4.7.4 166/head
Timo Heister [Tue, 26 Jan 2021 18:52:40 +0000 (13:52 -0500)]
add netcdf 4.7.4

3 years agoadd muparser as separate package 165/head
Timo Heister [Tue, 26 Jan 2021 16:29:30 +0000 (11:29 -0500)]
add muparser as separate package

3 years agoguess_platform: use major version for debian as well 164/head
Uwe Köcher [Fri, 22 Jan 2021 22:52:55 +0000 (23:52 +0100)]
guess_platform: use major version for debian as well

3 years agoremoves opensuse unsupported platform files
Uwe Köcher [Fri, 22 Jan 2021 22:42:54 +0000 (23:42 +0100)]
removes opensuse unsupported platform files

3 years agoguess_platform: find major os version
Uwe Köcher [Fri, 22 Jan 2021 22:38:49 +0000 (23:38 +0100)]
guess_platform: find major os version

3 years agoadds fedora29 platform file
Uwe Köcher [Fri, 22 Jan 2021 21:58:26 +0000 (22:58 +0100)]
adds fedora29 platform file

3 years agocandi.sh: new guess_platform: removes dependency from lsb_release
Uwe Köcher [Fri, 22 Jan 2021 21:48:24 +0000 (22:48 +0100)]
candi.sh: new guess_platform: removes dependency from lsb_release

3 years agoMerge pull request #158 from tjhei/ci_linux_blas
Timo Heister [Wed, 20 Jan 2021 15:57:03 +0000 (10:57 -0500)]
Merge pull request #158 from tjhei/ci_linux_blas

CI: add ubuntu 20.04 with openblas, rename and restructure OSX

3 years agoMerge pull request #153 from tjhei/hdf5-1.10.7
Uwe Köcher [Wed, 20 Jan 2021 09:09:43 +0000 (10:09 +0100)]
Merge pull request #153 from tjhei/hdf5-1.10.7

hdf5: bump to 1.10.7

3 years agoMerge pull request #161 from tjhei/openblas_fixes
Uwe Köcher [Wed, 20 Jan 2021 09:05:57 +0000 (10:05 +0100)]
Merge pull request #161 from tjhei/openblas_fixes

openblas: update to 0.3.13 and fix OSX

3 years agoMerge pull request #162 from tjhei/python3
Uwe Köcher [Wed, 20 Jan 2021 09:04:24 +0000 (10:04 +0100)]
Merge pull request #162 from tjhei/python3

handle python3 correctly

3 years agohandle python3 correctly 162/head
Timo Heister [Sun, 20 Dec 2020 16:53:10 +0000 (11:53 -0500)]
handle python3 correctly

If "python" does not exist in the environment, we set PYTHONVER to the
empty string, which makes configuration fail. Fix this.

3 years agoMerge pull request #160 from tjhei/centos_cmake
Timo Heister [Sat, 9 Jan 2021 19:08:13 +0000 (14:08 -0500)]
Merge pull request #160 from tjhei/centos_cmake

take over #154 and #157 (centos cmake) to master branch

3 years agohdf5: bump to 1.10.7 153/head
Timo Heister [Sun, 20 Dec 2020 17:13:49 +0000 (12:13 -0500)]
hdf5: bump to 1.10.7

3 years agofix openblas on OSX 161/head
Timo Heister [Sun, 20 Dec 2020 19:59:47 +0000 (14:59 -0500)]
fix openblas on OSX

3 years agoupdate openblas to 0.3.13
Timo Heister [Sun, 20 Dec 2020 19:59:39 +0000 (14:59 -0500)]
update openblas to 0.3.13

I am getting compile errors with the old version on ubuntu 20.04:
getarch_2nd.c:12:35: error: ‘SGEMM_DEFAULT_UNROLL_M’ undeclared (first
use in this function); did you mean ‘XGEMM_DEFAULT_UNROLL_M’?

An update fixes this.

3 years agoAddresses issue #155 old CentOS compilers 160/head
ohcfe [Wed, 23 Dec 2020 11:17:17 +0000 (06:17 -0500)]
Addresses issue #155 old CentOS compilers

3 years agoAddresses issue #154 CentOS cmake is too old
ohcfe [Wed, 23 Dec 2020 11:06:23 +0000 (06:06 -0500)]
Addresses issue #154 CentOS cmake is too old

3 years agoMerge pull request #152 from tjhei/ci_lapack
Timo Heister [Fri, 8 Jan 2021 20:34:02 +0000 (15:34 -0500)]
Merge pull request #152 from tjhei/ci_lapack

CI: fix OSX tester

3 years agodebug build 158/head
Timo Heister [Fri, 1 Jan 2021 14:41:41 +0000 (09:41 -0500)]
debug build

3 years agouse older cmake
Timo Heister [Fri, 1 Jan 2021 14:41:35 +0000 (09:41 -0500)]
use older cmake

3 years agooutput detailed.log
Timo Heister [Fri, 1 Jan 2021 14:40:01 +0000 (09:40 -0500)]
output detailed.log

3 years agoCI: add ubuntu 20.04 with openblas, rename and restructure OSX
Timo Heister [Thu, 31 Dec 2020 22:54:28 +0000 (17:54 -0500)]
CI: add ubuntu 20.04 with openblas, rename and restructure OSX

3 years agoCI: fix OSX build 152/head
Timo Heister [Sun, 20 Dec 2020 17:02:03 +0000 (12:02 -0500)]
CI: fix OSX build

- force cmake 3.18 as 9.2 does not support 3.19 (default in the VM)
- change the minimal build to use MPI as well (without it, blas is not
found for some reason). There is no good reason to test candi builds
without MPI.

3 years agoMerge pull request #148 from rezarastak/remove_threads
Timo Heister [Sun, 20 Dec 2020 16:39:15 +0000 (11:39 -0500)]
Merge pull request #148 from rezarastak/remove_threads

remove WITH_THREADS

4 years agofix trilinos tpetra when using intel MKL 150/head
Timo Heister [Tue, 23 Jun 2020 18:05:02 +0000 (14:05 -0400)]
fix trilinos tpetra when using intel MKL

The choice to disable TPetra when using MKL lead to several downstream
Trilinos configuration errors. Instead, just disable the two
instantiations that are missing in MKL. Tested to work correctly with
Intel 19.0.5 and MKL.

4 years agoremove WITH_THREADS 148/head
Reza Rastak [Wed, 10 Jun 2020 23:30:35 +0000 (16:30 -0700)]
remove WITH_THREADS

4 years agoMerge pull request #146 from rezarastak/deprecate_old_ubuntu
Timo Heister [Tue, 9 Jun 2020 22:15:04 +0000 (18:15 -0400)]
Merge pull request #146 from rezarastak/deprecate_old_ubuntu

deprecate unsupported ubuntu platforms

4 years agoMerge pull request #147 from rezarastak/required_ubuntu_packages
Timo Heister [Tue, 9 Jun 2020 22:14:38 +0000 (18:14 -0400)]
Merge pull request #147 from rezarastak/required_ubuntu_packages

bc and python must be available on ubuntu

4 years agobc and python must be available on ubuntu 147/head
Reza Rastak [Tue, 9 Jun 2020 04:34:32 +0000 (21:34 -0700)]
bc and python must be available on ubuntu

4 years agodeprecate unsupported ubuntu platforms 146/head
Reza Rastak [Tue, 9 Jun 2020 03:11:17 +0000 (20:11 -0700)]
deprecate unsupported ubuntu platforms

4 years agoremove nanoflann 145/head
Timo Heister [Wed, 27 May 2020 15:13:16 +0000 (11:13 -0400)]
remove nanoflann

nanoflann is deprecated in deal.II and removed in 9.3.0-pre

4 years agoMerge pull request #144 from tjhei/master-9.2.0
Timo Heister [Mon, 25 May 2020 13:27:20 +0000 (09:27 -0400)]
Merge pull request #144 from tjhei/master-9.2.0

switch master branch to v9.2.0

4 years agoswitch master branch to v9.2.0 144/head
Timo Heister [Thu, 21 May 2020 22:12:00 +0000 (18:12 -0400)]
switch master branch to v9.2.0

4 years agoMerge pull request #141 from tjhei/petsc_slepc_update
Timo Heister [Tue, 19 May 2020 18:39:35 +0000 (14:39 -0400)]
Merge pull request #141 from tjhei/petsc_slepc_update

Petsc/slepc update

4 years agoMerge pull request #137 from tjhei/adolc-v2.7.2
Uwe Köcher [Mon, 18 May 2020 17:46:10 +0000 (19:46 +0200)]
Merge pull request #137 from tjhei/adolc-v2.7.2

update adol-c to 2.7.2

4 years agoMerge pull request #136 from tjhei/arch_manjaro
Uwe Köcher [Mon, 18 May 2020 17:12:08 +0000 (19:12 +0200)]
Merge pull request #136 from tjhei/arch_manjaro

basic working version for arch/manjaro

4 years agoMerge pull request #140 from tjhei/ubuntu2004
Uwe Köcher [Mon, 18 May 2020 17:09:39 +0000 (19:09 +0200)]
Merge pull request #140 from tjhei/ubuntu2004

support ubuntu 20.04

4 years agoupdate slepc/petsc version to 3.13.x 141/head
Timo Heister [Mon, 18 May 2020 13:41:43 +0000 (09:41 -0400)]
update slepc/petsc version to 3.13.x

This is required as our old version only supports Python 2.x, which is
end-of-life now.


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