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https://gitweb.dealii.org/ - dealii.git/log
Wolfgang Bangerth [Sun, 28 Feb 2016 21:44:37 +0000 (15:44 -0600)]
Rename an internal function to be consistent with the naming scheme elsewhere.
Wolfgang Bangerth [Sun, 28 Feb 2016 21:43:08 +0000 (15:43 -0600)]
Remove deprecated functions with names like 'boundary_indicator'.
They had previously already been replaced by functions with name 'boundary_id', to
be consistent with the spelling for other attributes such as subdomain_id,
material_id, etc.
Luca Heltai [Sun, 28 Feb 2016 19:08:14 +0000 (20:08 +0100)]
Merge pull request #2259 from bangerth/extend-manifolds
Extend manifolds
Wolfgang Bangerth [Sun, 28 Feb 2016 18:59:35 +0000 (12:59 -0600)]
Provide a default implementation of Manifold::get_tangent_vector().
Wolfgang Bangerth [Sun, 28 Feb 2016 18:50:02 +0000 (12:50 -0600)]
Augment documentation.
Wolfgang Bangerth [Sun, 28 Feb 2016 17:54:16 +0000 (11:54 -0600)]
Add tests.
Wolfgang Bangerth [Sun, 28 Feb 2016 17:53:41 +0000 (11:53 -0600)]
Implement Manifold::get_direction_vector() in FlatManifold.
Wolfgang Bangerth [Sun, 28 Feb 2016 17:52:34 +0000 (11:52 -0600)]
Add a member function Manifold::get_direction_vector().
Luca Heltai [Sun, 28 Feb 2016 18:55:55 +0000 (19:55 +0100)]
Merge pull request #2250 from bangerth/doc-update-49
Extend documentation of the Manifold class.
Wolfgang Bangerth [Sat, 27 Feb 2016 22:31:32 +0000 (16:31 -0600)]
Extend documentation of the Manifold class.
Denis Davydov [Sun, 28 Feb 2016 18:06:13 +0000 (19:06 +0100)]
Merge pull request #2257 from davydden/branch_petscscalar_complex_bits_3
add a message why one should not use GridRefinement functions with co…
Denis Davydov [Sun, 28 Feb 2016 16:16:04 +0000 (17:16 +0100)]
add a message why one should not use GridRefinement functions with complex-valued PETSc
Wolfgang Bangerth [Sun, 28 Feb 2016 17:59:27 +0000 (11:59 -0600)]
Merge pull request #2258 from appiazzolla/master
Make AdditionalData available from PreconditionBlockJacobi
x [Sun, 28 Feb 2016 16:25:49 +0000 (17:25 +0100)]
Make AdditionalData available from PreconditionBlockJacobi
Wolfgang Bangerth [Sun, 28 Feb 2016 14:16:39 +0000 (08:16 -0600)]
Merge pull request #2254 from davydden/branch_petscscalar_complex_bits_2
some bits towards complex-valued PETSc (part 2)
Denis Davydov [Sun, 28 Feb 2016 10:38:21 +0000 (11:38 +0100)]
extend MatrixTools::create_boundary_mass_matrix() for complex algebra
Most of the modifications are change of the multiplication order from
double * std::complex<scalar> to std::complex<scalar> * double.
Instantiate create_mass_matrix() and create_boundary_mass_matrix()
for complex case.
Denis Davydov [Sun, 28 Feb 2016 10:32:58 +0000 (11:32 +0100)]
adjust functions in ConstraintMatrix to compile with complex algebra
modified condense(), set_matrix_digonals() and resolve_vector_entry()
by swapping the order of multiplications.
Instantiate distribute_local_to_global() and condense() for complex
algebra.
Denis Davydov [Sun, 28 Feb 2016 10:28:23 +0000 (11:28 +0100)]
instantiate DoFTools::make_boundary_sparsity_pattern() for complex scalars
Wolfgang Bangerth [Sun, 28 Feb 2016 11:58:05 +0000 (05:58 -0600)]
Merge pull request #2249 from davydden/branch_petscscalar_complex_bits_1
some bits towards complex-valued PETSc
Wolfgang Bangerth [Sun, 28 Feb 2016 11:53:33 +0000 (05:53 -0600)]
Merge pull request #2251 from drwells/update-triangulation-comment-style
Update triangulation comment style
Denis Davydov [Sun, 28 Feb 2016 01:45:09 +0000 (02:45 +0100)]
minor fixes of auxiliary function in vector tools
David Wells [Sat, 27 Feb 2016 22:48:02 +0000 (17:48 -0500)]
Skip misleading links in tria.h.
David Wells [Sat, 27 Feb 2016 22:47:51 +0000 (17:47 -0500)]
Reformat example code in tria.h.
Denis Davydov [Sat, 27 Feb 2016 21:24:08 +0000 (22:24 +0100)]
minor extension of mass_assembler() in matrix tools for complex numbers
Denis Davydov [Sat, 27 Feb 2016 21:07:04 +0000 (22:07 +0100)]
extend MatrixTools::apply_boundary_values() to complex numbers
Denis Davydov [Sat, 27 Feb 2016 20:41:25 +0000 (21:41 +0100)]
move instantiation of MatrixTools::apply_boundary_values() to inst.in file
Denis Davydov [Sat, 27 Feb 2016 20:19:22 +0000 (21:19 +0100)]
instantiate n_boundary_dofs() for COMPLEX_SCALARS
Denis Davydov [Sat, 27 Feb 2016 20:12:59 +0000 (21:12 +0100)]
extend do_project() for complex numbers with ExcNotImplemented() for solver
Denis Davydov [Sat, 27 Feb 2016 20:07:30 +0000 (21:07 +0100)]
extend do_project_boundary_values() to complex numbers with ExcNotImplemented for solver
Denis Davydov [Sat, 27 Feb 2016 19:07:22 +0000 (20:07 +0100)]
fix apply_boundary_values() for PETSc
Wolfgang Bangerth [Sat, 27 Feb 2016 07:43:39 +0000 (01:43 -0600)]
Merge pull request #2241 from davydden/branch_petscscalar_complex_vectortools2
finish templating VectorTools; introduce templates to MatrixTools and…
Denis Davydov [Sat, 27 Feb 2016 02:59:54 +0000 (03:59 +0100)]
add an entry to changes.h
Denis Davydov [Sat, 27 Feb 2016 01:30:48 +0000 (02:30 +0100)]
add a few blank lines and use different include to get PetscScalar
Denis Davydov [Fri, 26 Feb 2016 18:40:08 +0000 (19:40 +0100)]
consolidate definitions of TrilinosScalar in base/types.h as a typedef
Denis Davydov [Tue, 23 Feb 2016 15:31:12 +0000 (16:31 +0100)]
continue templating VectorTools; introduce templates to MatrixTools and DoFTools
(i) drop the typedef FunctionMap from (hp::)DoFHandler and template n_boundary_dofs().
Fix a few places where it was used.
(ii) template make_boundary_sparsity_pattern(...,FunctionMap,...)
(iii) new templates in MatrixCreator::
create_mass_matrix(), create_boundary_mass_matrix(),
apply_boundary_values() and local_apply_boundary_values().
(iv) number templates in VectorTools::
interpolate_boundary_values(), project_boundary_values(),
(v) instantiate ConstraintMatrix::distribute_local_to_global for SparseMatrix<long double>
Wolfgang Bangerth [Thu, 25 Feb 2016 21:30:55 +0000 (15:30 -0600)]
Merge pull request #2245 from tjhei/blacklist_intel_1601
blacklist intel 16.0.1
Bruno Turcksin [Thu, 25 Feb 2016 18:21:36 +0000 (13:21 -0500)]
Merge pull request #2243 from tjhei/bug_mpi_allgather_type
fix incorrect MPI_Allgather
Timo Heister [Thu, 25 Feb 2016 17:29:55 +0000 (12:29 -0500)]
blacklist intel 16.0.1
Timo Heister [Thu, 25 Feb 2016 17:21:49 +0000 (12:21 -0500)]
fix incorrect MPI_Allgather
MPI_Allgather in compute_local_to_global_vertex_index_map() was using
the wrong data type, which probably lead to wrong results or at least
illegal memory access.
Bruno Turcksin [Wed, 24 Feb 2016 23:01:39 +0000 (18:01 -0500)]
Merge pull request #2242 from Rombur/trilinos_sparsity_pattern
Fix a bug in make_trilinos_map()
Bruno Turcksin [Wed, 24 Feb 2016 20:10:59 +0000 (15:10 -0500)]
Fix a bug in make_trilinos_map() where different processors would call different Epetra_Map constructor.
Martin Kronbichler [Wed, 24 Feb 2016 07:14:35 +0000 (08:14 +0100)]
Merge pull request #2238 from tjhei/step-22-document-stokes-op
step-22: document symmetric gradient
Timo Heister [Tue, 23 Feb 2016 18:04:17 +0000 (13:04 -0500)]
step-22: document symmetric gradient
Martin Kronbichler [Tue, 23 Feb 2016 18:17:56 +0000 (19:17 +0100)]
Merge pull request #2239 from drwells/fix-step-20-refactoring
Fix step-20 compilation.
David Wells [Tue, 23 Feb 2016 18:12:12 +0000 (13:12 -0500)]
Fix step-20 compilation.
76874a2160 did not correctly name a field of a class.
Denis Davydov [Tue, 23 Feb 2016 15:32:41 +0000 (16:32 +0100)]
Merge pull request #2235 from davydden/fix_fe_field_function_vector_gradient
fixed a bug in FEFieldFunction::vector_gradient() introduced in
0dc4d47
Denis Davydov [Tue, 23 Feb 2016 13:33:12 +0000 (14:33 +0100)]
fixed a bug in FEFieldFunction::vector_gradient() introduced in
0dc4d47
Martin Kronbichler [Tue, 23 Feb 2016 13:04:56 +0000 (14:04 +0100)]
Merge pull request #2234 from davydden/fix_vector_tools_interpolate_mat_id
fixed a bug introduced to VectorTools::interpolate_based_on_material_…
Denis Davydov [Tue, 23 Feb 2016 12:57:59 +0000 (13:57 +0100)]
fixed a bug introduced to VectorTools::interpolate_based_on_material_id() in
519d8b9
Wolfgang Bangerth [Tue, 23 Feb 2016 11:59:38 +0000 (05:59 -0600)]
Merge pull request #2227 from davydden/missing_include_tria_h
add a missing include for std::accumulate()
Denis Davydov [Tue, 23 Feb 2016 05:36:49 +0000 (06:36 +0100)]
Merge pull request #2226 from davydden/branch_petscscalar_complex_temporarymasking
temporary masking of few places for complex-valued PETSc
Denis Davydov [Mon, 22 Feb 2016 12:55:17 +0000 (13:55 +0100)]
temporary avoid instantiations of PointValueHistory, DerivativeApproximation and DataOut-related classes for complex-valued PETSc
Wolfgang Bangerth [Mon, 22 Feb 2016 23:31:30 +0000 (17:31 -0600)]
Merge pull request #2229 from davydden/fix_point_value_history
fix PointValueHistory to work with the updated VectorTools::point_val…
Denis Davydov [Mon, 22 Feb 2016 22:30:55 +0000 (23:30 +0100)]
fix PointValueHistory to work with the updated VectorTools::point_value()
Denis Davydov [Mon, 22 Feb 2016 17:51:45 +0000 (18:51 +0100)]
add a missing include for std::accumulate()
Denis Davydov [Mon, 22 Feb 2016 12:52:33 +0000 (13:52 +0100)]
temporary mark max/min element in grid_refinement for complex-valued PETSc as NotImplemented
Wolfgang Bangerth [Mon, 22 Feb 2016 17:04:27 +0000 (11:04 -0600)]
Merge pull request #2218 from davydden/branch_petscscalar_complex_error
extend error estimator to complex-valued PETSc
Wolfgang Bangerth [Mon, 22 Feb 2016 17:03:09 +0000 (11:03 -0600)]
Merge pull request #2220 from davydden/branch_petscscalar_complex_fetools
minor change to fe_tools_interpolate to allow complex-valued vectors
Denis Davydov [Mon, 22 Feb 2016 17:01:15 +0000 (18:01 +0100)]
Merge pull request #2217 from davydden/branch_petscscalar_complex_vectortools
extend VectorTools to complex-valued PETSc vector
Denis Davydov [Mon, 22 Feb 2016 12:37:20 +0000 (13:37 +0100)]
extend VectorTools to complex-valued PETSc vector
Wolfgang Bangerth [Mon, 22 Feb 2016 16:56:32 +0000 (10:56 -0600)]
Merge pull request #2222 from davydden/branch_petscscalar_complex_constraint
change instantiation of constraint matrix functions to allow complex-…
Wolfgang Bangerth [Mon, 22 Feb 2016 16:56:02 +0000 (10:56 -0600)]
Merge pull request #2225 from davydden/branch_petscscalar_complex_mappingeulerian
do not instantiate mapping eulerian for complex-valued PETSc
Wolfgang Bangerth [Mon, 22 Feb 2016 16:55:37 +0000 (10:55 -0600)]
Merge pull request #2223 from davydden/branch_petscscalar_complex_boomer
add extra ifndef to disable BoomerAMG for complex-valued PETSc
Denis Davydov [Mon, 22 Feb 2016 12:45:39 +0000 (13:45 +0100)]
change instantiation of constraint matrix functions to allow complex-valued vectors
Denis Davydov [Mon, 22 Feb 2016 12:49:53 +0000 (13:49 +0100)]
do not instantiate mapping eulerian for complex-valued PETSc
Denis Davydov [Mon, 22 Feb 2016 12:46:50 +0000 (13:46 +0100)]
add extra ifndef to disable BoomerAMG for complex-valued PETSc
Denis Davydov [Mon, 22 Feb 2016 12:42:32 +0000 (13:42 +0100)]
minor change to fe_tools_interpolate to allow complex-valued vectors
Denis Davydov [Mon, 22 Feb 2016 12:39:15 +0000 (13:39 +0100)]
extend error estimator to complex-valued PETSc
Wolfgang Bangerth [Mon, 22 Feb 2016 13:19:02 +0000 (07:19 -0600)]
Merge pull request #2221 from davydden/branch_petscscalar_complex_dofaccessor
change dof_accessor get/set instantiations to allow complex-valued ve…
Wolfgang Bangerth [Mon, 22 Feb 2016 13:13:36 +0000 (07:13 -0600)]
Merge pull request #2219 from davydden/branch_petscscalar_complex_fefieldfunction
extend FEFieldFunction to complex-valued vectors
Denis Davydov [Mon, 22 Feb 2016 12:43:33 +0000 (13:43 +0100)]
change dof_accessor get/set instantiations to allow complex-valued vectors
Denis Davydov [Mon, 22 Feb 2016 12:41:11 +0000 (13:41 +0100)]
extend FEFieldFunction to complex-valued vectors
Wolfgang Bangerth [Mon, 22 Feb 2016 13:07:21 +0000 (07:07 -0600)]
Merge pull request #2216 from davydden/branch_petscscalar_complex_block
minor adjustments to block matrix and vector to work with complex PETSc
Denis Davydov [Mon, 22 Feb 2016 12:29:45 +0000 (13:29 +0100)]
minor adjustments to block matrix and vector to work with complex PETSc
Wolfgang Bangerth [Mon, 22 Feb 2016 13:00:35 +0000 (07:00 -0600)]
Merge pull request #2215 from drwells/example-template-parameters-2
Prefer PreconditionerType to Preconditioner.
David Wells [Mon, 22 Feb 2016 04:23:43 +0000 (23:23 -0500)]
Prefer PreconditionerType to Preconditioner.
This commit updates the tutorials to use the same naming convention as
the rest of the library.
David Wells [Mon, 22 Feb 2016 02:23:15 +0000 (21:23 -0500)]
Merge pull request #2214 from bangerth/simplify-code-2
Simplify the code that accumulates the weights for cells during partitioning.
Wolfgang Bangerth [Mon, 22 Feb 2016 01:39:10 +0000 (19:39 -0600)]
Simplify the code that accumulates the weights for cells during partitioning.
Timo Heister [Sun, 21 Feb 2016 14:25:24 +0000 (09:25 -0500)]
Merge pull request #2213 from drwells/example-template-parameters
Prefer MatrixType to Matrix in the tutorials.
Timo Heister [Sun, 21 Feb 2016 14:24:04 +0000 (09:24 -0500)]
Merge pull request #2211 from drwells/update-step-20
Update step 20
David Wells [Sun, 21 Feb 2016 14:18:32 +0000 (09:18 -0500)]
Prefer MatrixType to Matrix in the tutorials.
David Wells [Sun, 21 Feb 2016 14:08:22 +0000 (09:08 -0500)]
Relate versions of InverseMatrix in steps 20-22.
David Wells [Sun, 21 Feb 2016 01:14:32 +0000 (20:14 -0500)]
Do not label plain classes as templates.
David Wells [Sat, 20 Feb 2016 23:41:57 +0000 (18:41 -0500)]
Get rid of IterativeInverse in step-20.
IterativeInverse was marked as deprecated in April 2015 in favor of
LinearOperator. This puts this step in a strange place; we should not
use deprecated features in tutorials, but at the same time we cannot use
its replacement, which requires C++11 support. To resolve this, this
step just provides its own replacement for a special case of
IterativeInverse.
David Wells [Sat, 20 Feb 2016 22:15:23 +0000 (17:15 -0500)]
Remove some trailing whitespace.
David Wells [Sat, 20 Feb 2016 22:15:12 +0000 (17:15 -0500)]
Fix a typo in the step-20 introduction.
David Wells [Sat, 20 Feb 2016 18:12:33 +0000 (13:12 -0500)]
Change initialization to avoid a static variable.
m_inverse depends on inner_control, so initialize inner_control first
rather than making it static.
David Wells [Sat, 20 Feb 2016 18:05:07 +0000 (13:05 -0500)]
Prefer face_n to face_no.
David Wells [Fri, 19 Feb 2016 01:39:35 +0000 (20:39 -0500)]
Merge pull request #2207 from bangerth/avoid-includes
Avoid a bunch of #include files that turn out to be not necessary.
Wolfgang Bangerth [Fri, 19 Feb 2016 00:54:30 +0000 (18:54 -0600)]
Avoid a bunch of #include files that turn out to be not necessary.
Wolfgang Bangerth [Thu, 18 Feb 2016 21:51:40 +0000 (15:51 -0600)]
Merge pull request #2205 from jppelteret/step-44-dim_indep
Update step-44 to be dimension independent
Jean-Paul Pelteret [Thu, 18 Feb 2016 16:25:16 +0000 (18:25 +0200)]
Astyle... finally...
Jean-Paul Pelteret [Thu, 18 Feb 2016 16:10:44 +0000 (18:10 +0200)]
Added 2-d results and updated changelog
David Wells [Wed, 17 Feb 2016 14:06:20 +0000 (09:06 -0500)]
Merge pull request #2204 from bangerth/use-proper-code-gallery-name
Use proper code gallery name
Jean-Paul Pelteret [Wed, 17 Feb 2016 12:54:02 +0000 (14:54 +0200)]
Adjust comments.
Wolfgang Bangerth [Wed, 17 Feb 2016 12:19:41 +0000 (06:19 -0600)]
Also use the proper name in the title of the program.
Jean-Paul Pelteret [Wed, 17 Feb 2016 10:43:03 +0000 (12:43 +0200)]
Use shared pointer to store Material class inside PointHistory.
Jean-Paul Pelteret [Wed, 17 Feb 2016 10:32:39 +0000 (12:32 +0200)]
Update step-44 to be dimension independent.
By making the appropriate changes to the material class, grid generation
and boundary conditions, the quasi-incompressible indentation problem
can be made dimension independent. The traction is now applied on the +Y
face instead of the +Z face so that the 2-d and 3-d problems can be
post-processed in a similar manner. The 2-d results are qualitatively
similar to that of the 3-d case, but due to the more constrained nature
of the problem (planar motion) the amount of compression achieved is
less than that of the 3-d case (while the laterial extension increases).
Wolfgang Bangerth [Wed, 17 Feb 2016 03:28:11 +0000 (21:28 -0600)]
Print notices about what is being built.
Wolfgang Bangerth [Wed, 17 Feb 2016 03:19:23 +0000 (21:19 -0600)]
Properly track dependencies.
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