]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
7 years agoAdd funding information 3329/head
Martin Kronbichler [Thu, 24 Nov 2016 17:35:44 +0000 (18:35 +0100)]
Add funding information

7 years agoAdjust numbers
Martin Kronbichler [Thu, 24 Nov 2016 12:04:53 +0000 (13:04 +0100)]
Adjust numbers

7 years agoAdd changelog
Martin Kronbichler [Thu, 24 Nov 2016 07:48:18 +0000 (08:48 +0100)]
Add changelog

7 years agoDistribute constraints
Martin Kronbichler [Wed, 23 Nov 2016 17:13:45 +0000 (18:13 +0100)]
Distribute constraints

7 years agoParallel results
Martin Kronbichler [Tue, 22 Nov 2016 14:05:29 +0000 (15:05 +0100)]
Parallel results

7 years agoAugment description about ghosted vectors
Martin Kronbichler [Tue, 22 Nov 2016 12:30:27 +0000 (13:30 +0100)]
Augment description about ghosted vectors

7 years agoImprove documentation
Martin Kronbichler [Tue, 22 Nov 2016 12:30:12 +0000 (13:30 +0100)]
Improve documentation

7 years agoAdjust text in step-48 to reflect changes in step-37.
Martin Kronbichler [Fri, 11 Nov 2016 16:28:11 +0000 (17:28 +0100)]
Adjust text in step-48 to reflect changes in step-37.

7 years agoWork on documentation
Martin Kronbichler [Tue, 1 Nov 2016 13:34:59 +0000 (14:34 +0100)]
Work on documentation

7 years agoUpdate step-37 to MPI
Martin Kronbichler [Mon, 31 Oct 2016 19:48:34 +0000 (20:48 +0100)]
Update step-37 to MPI

7 years agoMerge pull request #3621 from kalj/static-assert-dof-handler
Martin Kronbichler [Tue, 22 Nov 2016 09:25:21 +0000 (10:25 +0100)]
Merge pull request #3621 from kalj/static-assert-dof-handler

Use static assert to check for correct template parameters at compile time

7 years agoensure that correct template parameters have been used 3621/head
Karl Ljungkvist [Mon, 21 Nov 2016 11:34:36 +0000 (12:34 +0100)]
ensure that correct template parameters have been used

7 years agoMerge pull request #3484 from bangerth/initialize-members
Bruno Turcksin [Mon, 21 Nov 2016 14:00:45 +0000 (09:00 -0500)]
Merge pull request #3484 from bangerth/initialize-members

Initialize a bunch of member variables.

7 years agoMerge pull request #3605 from davydden/feature/mg_interface_matrix
Martin Kronbichler [Mon, 21 Nov 2016 13:28:55 +0000 (14:28 +0100)]
Merge pull request #3605 from davydden/feature/mg_interface_matrix

add MGInterfaceOperator and use it in a few tests

7 years agoMerge pull request #3594 from kalj/export-fill-copy-indices
Martin Kronbichler [Mon, 21 Nov 2016 13:24:48 +0000 (14:24 +0100)]
Merge pull request #3594 from kalj/export-fill-copy-indices

Make multigrid function `fill_copy_indices` available internally

7 years agoadd guard to only compile with sensible <dim,spacedim> combinations 3594/head
Karl Ljungkvist [Mon, 21 Nov 2016 08:28:11 +0000 (09:28 +0100)]
add guard to only compile with sensible <dim,spacedim> combinations

7 years agoMerge pull request #3619 from drwells/use-PetscErrorCode
Wolfgang Bangerth [Mon, 21 Nov 2016 00:47:10 +0000 (17:47 -0700)]
Merge pull request #3619 from drwells/use-PetscErrorCode

Use PetscErrorCode instead of int.

7 years agoMerge pull request #3590 from bangerth/fix-geometry-update-without-data
David Wells [Sun, 20 Nov 2016 20:58:21 +0000 (15:58 -0500)]
Merge pull request #3590 from bangerth/fix-geometry-update-without-data

Do compute the locations of vertices of patches also if no data is attached.

7 years agoUse PetscErrorCode instead of int. 3619/head
David Wells [Sun, 20 Nov 2016 04:22:07 +0000 (23:22 -0500)]
Use PetscErrorCode instead of int.

PETSc typedefs PetscErrorCode to be int (so these are equivalent) but this makes
things a bit clearer.

7 years agomoving implementations to a .cc file, with explicit instantiations
Karl Ljungkvist [Sat, 19 Nov 2016 11:32:01 +0000 (12:32 +0100)]
moving implementations to a .cc file, with explicit instantiations

7 years agoadding missing include files
Karl Ljungkvist [Sat, 19 Nov 2016 07:45:40 +0000 (08:45 +0100)]
adding missing include files

7 years agoMerge pull request #3618 from masterleinad/fix_changes_h
Wolfgang Bangerth [Fri, 18 Nov 2016 18:00:13 +0000 (11:00 -0700)]
Merge pull request #3618 from masterleinad/fix_changes_h

Fixup changes.h

7 years agoFixup changes.h 3618/head
Daniel Arndt [Fri, 18 Nov 2016 17:11:43 +0000 (18:11 +0100)]
Fixup changes.h

7 years agoMerge pull request #3576 from drwells/improve-petsc-checks
David Wells [Fri, 18 Nov 2016 11:30:11 +0000 (06:30 -0500)]
Merge pull request #3576 from drwells/improve-petsc-checks

Improve the output of PETSc exceptions.

7 years agore-break lines
Karl Ljungkvist [Fri, 18 Nov 2016 08:15:19 +0000 (09:15 +0100)]
re-break lines

7 years agoexport internal function fill_copy_indices for usage in other transfer classes
Karl Ljungkvist [Wed, 16 Nov 2016 14:14:28 +0000 (15:14 +0100)]
export internal function fill_copy_indices for usage in other transfer classes

7 years agoMerge pull request #3615 from bangerth/more-cleanups
David Wells [Thu, 17 Nov 2016 21:42:11 +0000 (16:42 -0500)]
Merge pull request #3615 from bangerth/more-cleanups

More cleanups of GridIn::read_vtk().

7 years agoMore cleanups of GridIn::read_vtk(). 3615/head
Wolfgang Bangerth [Thu, 17 Nov 2016 20:46:57 +0000 (13:46 -0700)]
More cleanups of GridIn::read_vtk().

Specifically, get rid of a pointless array. Make the assumption
that underlies it explicit by adding assertions.

7 years agoMerge pull request #3610 from masterleinad/template_create_rhs
Daniel Arndt [Thu, 17 Nov 2016 16:32:25 +0000 (17:32 +0100)]
Merge pull request #3610 from masterleinad/template_create_rhs

VectorType in VectorTools::create_*_hand_side

7 years agoMerge pull request #3601 from bangerth/cleanups
David Wells [Thu, 17 Nov 2016 15:52:15 +0000 (10:52 -0500)]
Merge pull request #3601 from bangerth/cleanups

More GridIn::write_vtk() cleanups.

7 years agoConsistently check PETSc/SLEPc error codes. 3576/head
David Wells [Thu, 17 Nov 2016 00:42:36 +0000 (19:42 -0500)]
Consistently check PETSc/SLEPc error codes.

7 years agoConsistently format PETSc/SLEPc error codes.
David Wells [Thu, 17 Nov 2016 00:41:08 +0000 (19:41 -0500)]
Consistently format PETSc/SLEPc error codes.

7 years agoImprove the output of PETSc exceptions.
David Wells [Sat, 12 Nov 2016 19:21:35 +0000 (14:21 -0500)]
Improve the output of PETSc exceptions.

7 years agoMerge pull request #3611 from masterleinad/test_massoperator
Wolfgang Bangerth [Thu, 17 Nov 2016 15:28:02 +0000 (08:28 -0700)]
Merge pull request #3611 from masterleinad/test_massoperator

Add another test for MatrixFreeOperators::MassOperator

7 years agoMerge pull request #3600 from bangerth/add-instantiations
David Wells [Thu, 17 Nov 2016 15:22:07 +0000 (10:22 -0500)]
Merge pull request #3600 from bangerth/add-instantiations

Add a few instantiations.

7 years agoMerge pull request #3609 from masterleinad/fix_permissions
Wolfgang Bangerth [Thu, 17 Nov 2016 15:13:49 +0000 (08:13 -0700)]
Merge pull request #3609 from masterleinad/fix_permissions

Fix file permissions in FETools

7 years agoAdd another test for MatrixFreeOperators::MassOperator that fails for insufficient... 3611/head
Daniel Arndt [Fri, 4 Nov 2016 10:43:22 +0000 (11:43 +0100)]
Add another test for MatrixFreeOperators::MassOperator that fails for insufficient Quadrature

7 years agoAllow a template VectorType in VectorTools::create_right_hand_side and VectorTools... 3610/head
Daniel Arndt [Fri, 4 Nov 2016 10:30:59 +0000 (11:30 +0100)]
Allow a template VectorType in VectorTools::create_right_hand_side and VectorTools::create_boundary_right_hand_side

7 years agoFix file permissions in FETools 3609/head
Daniel Arndt [Thu, 17 Nov 2016 13:57:51 +0000 (14:57 +0100)]
Fix file permissions in FETools

7 years agoMerge pull request #3608 from masterleinad/remove_logname
Wolfgang Bangerth [Thu, 17 Nov 2016 14:06:21 +0000 (07:06 -0700)]
Merge pull request #3608 from masterleinad/remove_logname

Remove logname variable in tests

7 years agoRemove logname variable 3608/head
Daniel Arndt [Fri, 4 Nov 2016 10:08:54 +0000 (11:08 +0100)]
Remove logname variable

7 years agoMerge pull request #3603 from bangerth/fix-type-error
David Wells [Thu, 17 Nov 2016 12:35:53 +0000 (07:35 -0500)]
Merge pull request #3603 from bangerth/fix-type-error

Fix a type error.

7 years agoadd MGInterfaceOperator and use it in a few tests 3605/head
Denis Davydov [Thu, 17 Nov 2016 09:39:55 +0000 (10:39 +0100)]
add MGInterfaceOperator and use it in a few tests

7 years agoFix a type error. 3603/head
Wolfgang Bangerth [Thu, 17 Nov 2016 03:49:54 +0000 (20:49 -0700)]
Fix a type error.

7 years agoMore GridIn::write_vtk() cleanups. 3601/head
Wolfgang Bangerth [Thu, 17 Nov 2016 03:10:00 +0000 (20:10 -0700)]
More GridIn::write_vtk() cleanups.

7 years agoAdd a few instantiations. 3600/head
Wolfgang Bangerth [Thu, 17 Nov 2016 03:01:42 +0000 (20:01 -0700)]
Add a few instantiations.

7 years agoMerge pull request #3598 from bangerth/fix-compilation
Wolfgang Bangerth [Thu, 17 Nov 2016 03:01:06 +0000 (20:01 -0700)]
Merge pull request #3598 from bangerth/fix-compilation

Fix compilation.

7 years agoFix compilation. 3598/head
Wolfgang Bangerth [Thu, 17 Nov 2016 02:58:36 +0000 (19:58 -0700)]
Fix compilation.

7 years agoMerge pull request #3592 from tamiko/fix_constraint_matrix
Matthias Maier [Wed, 16 Nov 2016 23:52:25 +0000 (17:52 -0600)]
Merge pull request #3592 from tamiko/fix_constraint_matrix

LAC: also allow ConstraintMatrix::distribute for std::complex

7 years agoMerge pull request #3517 from drwells/improve-mpi-checks
Wolfgang Bangerth [Wed, 16 Nov 2016 22:01:41 +0000 (15:01 -0700)]
Merge pull request #3517 from drwells/improve-mpi-checks

Improve mpi checks

7 years agoMerge pull request #3595 from bangerth/cleanups
David Wells [Wed, 16 Nov 2016 21:56:50 +0000 (16:56 -0500)]
Merge pull request #3595 from bangerth/cleanups

Clean up GridIn::read_vtk() in several ways.

7 years agoClean up GridIn::read_vtk() in several ways. 3595/head
Wolfgang Bangerth [Wed, 16 Nov 2016 14:36:14 +0000 (07:36 -0700)]
Clean up GridIn::read_vtk() in several ways.

Rename some variables. Also note that we always had
  vertex_indices[i] = i
  quad_indices[i] = i
  line_indices[i] = i
and so can get rid of these maps. They are a left-over from apparently copy-pasting
the initial version of this function from the UNV reader where this did not
have to be the case.

The function has many other problems, but I'm an incrementalist and I choose progress
over waiting for the perfect to happen :-).

7 years agoadd a test 3592/head
Matthias Maier [Wed, 16 Nov 2016 05:06:38 +0000 (23:06 -0600)]
add a test

7 years agoLAC: also allow ConstraintMatrix::distribute for std::complex
Matthias Maier [Wed, 16 Nov 2016 04:49:10 +0000 (22:49 -0600)]
LAC: also allow ConstraintMatrix::distribute for std::complex

Fix a typetrait check in ConstraintMatrix::distribute such that said class
and method can be used with complex valued vector types.

7 years agoMerge pull request #3591 from bangerth/fix-off-by-one-error
David Wells [Wed, 16 Nov 2016 14:09:46 +0000 (09:09 -0500)]
Merge pull request #3591 from bangerth/fix-off-by-one-error

Fix an off-by-one error in GridIn::read_vtk().

7 years agoMerge pull request #3593 from masterleinad/fix_mapping_test
Wolfgang Bangerth [Wed, 16 Nov 2016 13:53:57 +0000 (06:53 -0700)]
Merge pull request #3593 from masterleinad/fix_mapping_test

Fix mapping_q_manifold_01

7 years agoMerge pull request #3587 from bangerth/add-copy-operator
David Wells [Wed, 16 Nov 2016 13:06:11 +0000 (08:06 -0500)]
Merge pull request #3587 from bangerth/add-copy-operator

Fix Trilinos SparsityPattern iterators.

7 years agoFix mapping_q_manifold_01 3593/head
Daniel Arndt [Wed, 16 Nov 2016 10:42:10 +0000 (11:42 +0100)]
Fix mapping_q_manifold_01

7 years agoAdd a testcase. 3591/head
Wolfgang Bangerth [Wed, 16 Nov 2016 04:12:49 +0000 (21:12 -0700)]
Add a testcase.

7 years agoAdd a changelog entry.
Wolfgang Bangerth [Wed, 16 Nov 2016 04:12:30 +0000 (21:12 -0700)]
Add a changelog entry.

7 years agoFix an off-by-one error in GridIn::read_vtk.
Mayank Sabharwal [Wed, 16 Nov 2016 04:12:16 +0000 (21:12 -0700)]
Fix an off-by-one error in GridIn::read_vtk.

7 years agoAdd a changelog entry. 3587/head
Wolfgang Bangerth [Tue, 15 Nov 2016 14:55:30 +0000 (07:55 -0700)]
Add a changelog entry.

7 years agoAdd tests.
Wolfgang Bangerth [Tue, 15 Nov 2016 14:48:47 +0000 (07:48 -0700)]
Add tests.

7 years agoFix the (entirely broken) function Accessor::visit_present_row().
Wolfgang Bangerth [Tue, 15 Nov 2016 14:48:20 +0000 (07:48 -0700)]
Fix the (entirely broken) function Accessor::visit_present_row().

7 years agoRemove the copy constryctor of TrilinosWrappers::SparsityPatternIterators::Accessor.
Wolfgang Bangerth [Mon, 14 Nov 2016 23:52:07 +0000 (16:52 -0700)]
Remove the copy constryctor of TrilinosWrappers::SparsityPatternIterators::Accessor.

It is the default copy constructor, and by removing it, we need not
worry about the fact that we have no copy assignment operator in this class.

7 years agoAdd a testcase. 3590/head
Wolfgang Bangerth [Wed, 16 Nov 2016 01:08:36 +0000 (18:08 -0700)]
Add a testcase.

7 years agoAdd changelog entry.
Wolfgang Bangerth [Wed, 16 Nov 2016 01:08:18 +0000 (18:08 -0700)]
Add changelog entry.

7 years agoDo compute the locations of vertices of patches also if no data is attached.
Wolfgang Bangerth [Wed, 16 Nov 2016 01:06:50 +0000 (18:06 -0700)]
Do compute the locations of vertices of patches also if no data is attached.

Previously, higher order or Eulerian mappings were ignores if no data was attached to a DataOut object.
This seems wrong. Fix this by moving a piece of code before the check whether there is data.

7 years agoMerge pull request #3589 from bangerth/fix-wrong-mapping-clone
Daniel Arndt [Wed, 16 Nov 2016 00:54:22 +0000 (01:54 +0100)]
Merge pull request #3589 from bangerth/fix-wrong-mapping-clone

Fix a rather insidious bug in MappingQ.

7 years agoAdd a changelog entry. 3589/head
Wolfgang Bangerth [Tue, 15 Nov 2016 22:03:08 +0000 (15:03 -0700)]
Add a changelog entry.

7 years agoAdd testcases.
Wolfgang Bangerth [Tue, 15 Nov 2016 21:58:47 +0000 (14:58 -0700)]
Add testcases.

7 years agoMerge pull request #3588 from bangerth/update-some-comments
Timo Heister [Tue, 15 Nov 2016 18:09:43 +0000 (13:09 -0500)]
Merge pull request #3588 from bangerth/update-some-comments

Update some comments that were not quite accurate any more.

7 years agoEnsure that cloning a mapping also copies all internal variables.
Wolfgang Bangerth [Tue, 15 Nov 2016 17:17:29 +0000 (10:17 -0700)]
Ensure that cloning a mapping also copies all internal variables.

MappingQ has a member variable 'use_mapping_q_on_all_cells', but this variable is not
replicated when calling MappingQ::clone(). Fix this.

7 years agoUpdate some comments that were not quite accurate any more. 3588/head
Wolfgang Bangerth [Tue, 15 Nov 2016 17:15:56 +0000 (10:15 -0700)]
Update some comments that were not quite accurate any more.

Also just minor cleanups. No functional changes.

7 years agoMerge pull request #3585 from kalj/mg-fix
Wolfgang Bangerth [Tue, 15 Nov 2016 13:36:07 +0000 (06:36 -0700)]
Merge pull request #3585 from kalj/mg-fix

Fix array lenghts

7 years agoMerge pull request #3582 from bangerth/add-comment
Martin Kronbichler [Tue, 15 Nov 2016 12:08:49 +0000 (13:08 +0100)]
Merge pull request #3582 from bangerth/add-comment

Add a reference to step-33.

7 years agoMerge pull request #3584 from bangerth/improve-error
Martin Kronbichler [Tue, 15 Nov 2016 11:58:45 +0000 (12:58 +0100)]
Merge pull request #3584 from bangerth/improve-error

Improve an error message.

7 years agoFix array lenghts 3585/head
Karl Ljungkvist [Thu, 9 Jun 2016 12:47:45 +0000 (14:47 +0200)]
Fix array lenghts

7 years agoImprove an error message. 3584/head
Wolfgang Bangerth [Tue, 15 Nov 2016 00:30:51 +0000 (17:30 -0700)]
Improve an error message.

7 years agoMerge pull request #3579 from bangerth/initialize-members-2
David Wells [Mon, 14 Nov 2016 22:00:30 +0000 (17:00 -0500)]
Merge pull request #3579 from bangerth/initialize-members-2

Initialize the 'matrix' and 'vector' members in the PETSc wrappers.

7 years agoAdd a reference to step-33. 3582/head
Wolfgang Bangerth [Mon, 14 Nov 2016 19:58:22 +0000 (12:58 -0700)]
Add a reference to step-33.

7 years agoMerge pull request #3581 from bangerth/make-comment-more-readable
Timo Heister [Mon, 14 Nov 2016 19:10:49 +0000 (14:10 -0500)]
Merge pull request #3581 from bangerth/make-comment-more-readable

Make comment more readable.

7 years agoMake comment more readable. 3581/head
Wolfgang Bangerth [Mon, 14 Nov 2016 18:05:41 +0000 (11:05 -0700)]
Make comment more readable.

7 years agoInitialize the 'matrix' and 'vector' members in the PETSc wrappers. 3579/head
Wolfgang Bangerth [Mon, 14 Nov 2016 14:10:43 +0000 (07:10 -0700)]
Initialize the 'matrix' and 'vector' members in the PETSc wrappers.

These members are of type 'Mat' and 'Vec', which are typedefed to pointers to otherwise
opaque types. Initialize these members to 'NULL'.

7 years agoMerge pull request #3575 from bangerth/initialize-member-variable-2
David Wells [Mon, 14 Nov 2016 13:40:16 +0000 (08:40 -0500)]
Merge pull request #3575 from bangerth/initialize-member-variable-2

Initialize member variables.

7 years agoMerge pull request #3577 from masterleinad/initialize_quick_tests
Daniel Arndt [Sun, 13 Nov 2016 20:02:24 +0000 (21:02 +0100)]
Merge pull request #3577 from masterleinad/initialize_quick_tests

Initialize all variables in quick_tests/step

7 years agoInitialize all variables in quick_tests/step 3577/head
Daniel Arndt [Sun, 13 Nov 2016 18:39:17 +0000 (19:39 +0100)]
Initialize all variables in quick_tests/step

7 years agoMerge pull request #3572 from davydden/pvs/parpack
David Wells [Sat, 12 Nov 2016 16:47:59 +0000 (11:47 -0500)]
Merge pull request #3572 from davydden/pvs/parpack

parpack: initialize member variables

7 years agoMerge pull request #3574 from bangerth/initialize-member-variable
David Wells [Sat, 12 Nov 2016 16:32:44 +0000 (11:32 -0500)]
Merge pull request #3574 from bangerth/initialize-member-variable

Initialize a member variable.

8 years agoInitialize member variables. 3575/head
Wolfgang Bangerth [Sat, 12 Nov 2016 14:41:16 +0000 (07:41 -0700)]
Initialize member variables.

8 years agoInitialize a member variable. 3574/head
Wolfgang Bangerth [Sat, 12 Nov 2016 14:33:19 +0000 (07:33 -0700)]
Initialize a member variable.

8 years agoMerge pull request #3573 from drwells/petsc-matrix-accessor-copy-operator
Wolfgang Bangerth [Sat, 12 Nov 2016 14:26:31 +0000 (07:26 -0700)]
Merge pull request #3573 from drwells/petsc-matrix-accessor-copy-operator

Petsc matrix accessor copy operator

8 years agoAdd a test for copying PETSc matrix iterators. 3573/head
David Wells [Sat, 12 Nov 2016 03:21:07 +0000 (22:21 -0500)]
Add a test for copying PETSc matrix iterators.

8 years agoRemove an unnecessary copy constructor.
David Wells [Sat, 12 Nov 2016 03:08:32 +0000 (22:08 -0500)]
Remove an unnecessary copy constructor.

PVS studio rightfully complains that we should define operator= whenever
we explicitly define a copy constructor. However, since our copy
constructor does nothing special it is in fact equivalent to the default
copy constructor, so we can just get get rid of it and let the compiler
generate the correct copying code.

8 years agoMerge pull request #3570 from bangerth/fix-typo
David Wells [Sat, 12 Nov 2016 01:13:37 +0000 (20:13 -0500)]
Merge pull request #3570 from bangerth/fix-typo

Fix comment style.

8 years agoMerge pull request #3528 from masterleinad/update_postprocess
Wolfgang Bangerth [Sat, 12 Nov 2016 01:06:52 +0000 (18:06 -0700)]
Merge pull request #3528 from masterleinad/update_postprocess

Update DataPostprocessor in examples

8 years agoUpdate DataPostprocessor in examples 3528/head
Daniel Arndt [Fri, 11 Nov 2016 13:31:46 +0000 (14:31 +0100)]
Update DataPostprocessor in examples

8 years agoFix comment style. 3570/head
Wolfgang Bangerth [Fri, 11 Nov 2016 21:04:43 +0000 (14:04 -0700)]
Fix comment style.

8 years agoparpack: initialize member variables 3572/head
Denis Davydov [Fri, 11 Nov 2016 22:09:47 +0000 (23:09 +0100)]
parpack: initialize member variables

8 years agoMerge pull request #3571 from bangerth/rename-variables
Denis Davydov [Fri, 11 Nov 2016 21:12:29 +0000 (22:12 +0100)]
Merge pull request #3571 from bangerth/rename-variables

Rename a local variable.


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