]>
https://gitweb.dealii.org/ - dealii.git/log
David Wells [Sat, 5 Nov 2016 02:46:45 +0000 (22:46 -0400)]
Initialize two DoFInfo fields.
These are the same values used in the reinit function.
David Wells [Sat, 5 Nov 2016 01:40:58 +0000 (21:40 -0400)]
Merge pull request #3463 from bangerth/rename-variables-3
Rename some variables.
David Wells [Sat, 5 Nov 2016 00:43:58 +0000 (20:43 -0400)]
Merge pull request #3464 from bangerth/rename-functions-and-variables
Rename local variables with names equal to members of the base class.
David Wells [Fri, 4 Nov 2016 23:58:32 +0000 (19:58 -0400)]
Merge pull request #3465 from bangerth/clarify-code
Clarify the intent of a piece of code.
David Wells [Fri, 4 Nov 2016 23:21:07 +0000 (19:21 -0400)]
Merge pull request #3466 from bangerth/initialize-variable-5
Initialize a member variable of LogStream.
Martin Kronbichler [Fri, 4 Nov 2016 22:25:06 +0000 (23:25 +0100)]
Merge pull request #3467 from bangerth/initialize-variable-6
Initialize member variables.
David Wells [Fri, 4 Nov 2016 22:24:03 +0000 (18:24 -0400)]
Merge pull request #3459 from bangerth/rename-arguments
Rename function arguments.
David Wells [Fri, 4 Nov 2016 22:13:41 +0000 (18:13 -0400)]
Merge pull request #3458 from bangerth/rename-variables
Rename some variables.
Wolfgang Bangerth [Fri, 4 Nov 2016 20:38:24 +0000 (14:38 -0600)]
Initialize member variables.
Wolfgang Bangerth [Fri, 4 Nov 2016 20:35:12 +0000 (14:35 -0600)]
Initialize a member variable of LogStream.
The variable really was never initialized, even though some
output depended on it. I suspect that it just happened to always
be initialized to 'false'. Make this explicit.
Wolfgang Bangerth [Fri, 4 Nov 2016 20:31:09 +0000 (14:31 -0600)]
Clarify the intent of a piece of code.
The code uses integer division, followed by a double precision multiplication.
It is admittedly not immediately obvious what it is supposed to do. Clarify
that we really mean the integer division.
Wolfgang Bangerth [Fri, 4 Nov 2016 20:22:25 +0000 (14:22 -0600)]
Rename local variables with names equal to members of the base class.
This is certainly confusing.
While there, notice that the functions that *compute* quadrature points
and weights are called 'set_*', but are 'const'. That makes no sense.
In fact, they just compute and return these values, so call them
'get_*' instead.
Wolfgang Bangerth [Fri, 4 Nov 2016 20:16:13 +0000 (14:16 -0600)]
Rename some variables.
There are variables of the same name in the base class. Avoid the
confusion of having similarly named variables in the local scope.
Matthias Maier [Fri, 4 Nov 2016 18:44:42 +0000 (13:44 -0500)]
Merge pull request #3450 from bangerth/fix-warning
No need for double parentheses.
Matthias Maier [Fri, 4 Nov 2016 18:44:28 +0000 (13:44 -0500)]
Merge pull request #3446 from bangerth/fix-DataOutRotation-build_one_patch
Rename a function argument.
Matthias Maier [Fri, 4 Nov 2016 18:43:24 +0000 (13:43 -0500)]
Merge pull request #3453 from bangerth/initialize-variables-4
Initialize member variables.
Matthias Maier [Fri, 4 Nov 2016 18:41:03 +0000 (13:41 -0500)]
Merge pull request #3338 from kalj/check-for-compute-capability
Check for compute capability
Denis Davydov [Fri, 4 Nov 2016 18:34:42 +0000 (19:34 +0100)]
Merge pull request #3461 from kalj/patch-1
Use a single if block
Karl Ljungkvist [Fri, 4 Nov 2016 18:30:45 +0000 (19:30 +0100)]
Use a single if block
Fix warning from PVS about two if blocks with identical condition. Fixes #3369.
Wolfgang Bangerth [Fri, 4 Nov 2016 16:49:55 +0000 (10:49 -0600)]
Rename function arguments.
The Nedelec class used 'degree' in a few places, but it was
really the 'order' of the element. The polynomial degree as
used in the base class is 'order+1'.
Wolfgang Bangerth [Fri, 4 Nov 2016 16:48:16 +0000 (10:48 -0600)]
Rename some variables.
There are variables of the same name in the base class. Avoid the
confusion of having similarly named variables in the local scope.
Daniel Arndt [Fri, 4 Nov 2016 16:24:42 +0000 (17:24 +0100)]
Merge pull request #3455 from masterleinad/fix_parpack_test
Fix parpack test
Timo Heister [Fri, 4 Nov 2016 14:38:20 +0000 (10:38 -0400)]
Merge pull request #3448 from davydden/matrix_free_Laplace_GMG_unit_test
add another matrix-free laplace GMG unit test
Daniel Arndt [Fri, 4 Nov 2016 14:13:24 +0000 (15:13 +0100)]
Merge pull request #3449 from drwells/pvs-timer-initialization
Add some missing initializations to Timer.
Daniel Arndt [Fri, 4 Nov 2016 13:57:06 +0000 (14:57 +0100)]
Fix parpack test
Wolfgang Bangerth [Fri, 4 Nov 2016 13:43:55 +0000 (07:43 -0600)]
Initialize member variables.
Denis Davydov [Fri, 4 Nov 2016 13:43:51 +0000 (14:43 +0100)]
Merge pull request #3452 from bangerth/initialize-variables
Initialize member variables.
Wolfgang Bangerth [Fri, 4 Nov 2016 13:40:28 +0000 (07:40 -0600)]
Initialize member variables.
Wolfgang Bangerth [Thu, 3 Nov 2016 22:53:45 +0000 (16:53 -0600)]
Rename a function argument.
DataOutRotation::build_one_patch took a variable named 'patches',
but unlike in #3445, it is not a reference to the class's member
variable of the same name. Rather, it is an array this function
needs to fill in, and nobody else sees it. Consequently,
rename it 'my_patches'.
While there, also update the documentation, which is no longer
in agreement with the implementation.
Wolfgang Bangerth [Fri, 4 Nov 2016 13:13:41 +0000 (07:13 -0600)]
No need for double parentheses.
Denis Davydov [Fri, 4 Nov 2016 11:52:32 +0000 (12:52 +0100)]
do not require Trilinos for matrix_free tests which do not use it
Denis Davydov [Fri, 4 Nov 2016 11:47:14 +0000 (12:47 +0100)]
add another matrix-free laplace GMG unit test
David Wells [Fri, 4 Nov 2016 11:22:56 +0000 (07:22 -0400)]
Add some missing initializations to Timer.
Some of these were caught by PVS studio.
David Wells [Fri, 4 Nov 2016 10:55:24 +0000 (06:55 -0400)]
Merge pull request #3445 from bangerth/dont-duplicate-variable
Let DataOut::build_one_patch use a member variable.
David Wells [Fri, 4 Nov 2016 10:49:41 +0000 (06:49 -0400)]
Merge pull request #3444 from class4kayaker/static_fix
Fix FE_QHier static analysis warning
Wolfgang Bangerth [Fri, 4 Nov 2016 00:52:22 +0000 (18:52 -0600)]
Merge pull request #3434 from bangerth/initialize-member-variable
Initialize a member variable.
David Wells [Thu, 3 Nov 2016 23:17:58 +0000 (19:17 -0400)]
Merge pull request #3435 from bangerth/initialize-member-variable-2
Initialize member variables to invalid values.
Wolfgang Bangerth [Thu, 3 Nov 2016 22:34:08 +0000 (16:34 -0600)]
Let DataOut::build_one_patch use a member variable.
Currently, it takes a reference to a variable as argument, but this variable
is a member variable of the class to which it has access. That's duplicative.
To make things even more confusing, the local variable and the member
are named the same.
Fix this by just not taking the reference as argument, and directly
accessing the member of the class.
Wolfgang Bangerth [Thu, 3 Nov 2016 22:31:17 +0000 (16:31 -0600)]
Merge pull request #3439 from bangerth/simplify-computation
Simplify an initialization.
Wolfgang Bangerth [Thu, 3 Nov 2016 22:31:07 +0000 (16:31 -0600)]
Merge pull request #3437 from bangerth/be-careful-with-streams
Be more careful with streams.
Wolfgang Bangerth [Thu, 3 Nov 2016 22:30:59 +0000 (16:30 -0600)]
Merge pull request #3436 from bangerth/avoid-pointless-condition
Avoid a pointless comparison.
Jonathan Robey [Thu, 3 Nov 2016 21:26:55 +0000 (14:26 -0700)]
Fix FE_QHier static analysis warning
Fix to #3406
Denis Davydov [Thu, 3 Nov 2016 20:42:02 +0000 (21:42 +0100)]
Merge pull request #3442 from Rombur/add-assertthrow
Add a forgotten assert.
Bruno Turcksin [Thu, 3 Nov 2016 20:39:39 +0000 (16:39 -0400)]
Add a forgotten assert.
Bruno Turcksin [Thu, 3 Nov 2016 20:32:51 +0000 (16:32 -0400)]
Merge pull request #3441 from bangerth/initialize-variables-2
Initialize a member variable to invalid values.
David Wells [Thu, 3 Nov 2016 20:10:06 +0000 (16:10 -0400)]
Merge pull request #3431 from bangerth/make-variable-names-uniform
Make variable names uniform.
Daniel Arndt [Thu, 3 Nov 2016 18:47:22 +0000 (19:47 +0100)]
Merge pull request #3432 from bangerth/fix-blockvectorbase-memory_consumption
Fix BlockVectorBase::memory_consumption.
Wolfgang Bangerth [Thu, 3 Nov 2016 18:16:56 +0000 (12:16 -0600)]
Initialize a member variable to invalid values.
Wolfgang Bangerth [Thu, 3 Nov 2016 17:58:48 +0000 (11:58 -0600)]
Simplify an initialization.
Wolfgang Bangerth [Thu, 3 Nov 2016 17:56:41 +0000 (11:56 -0600)]
Be more careful with streams.
In particular, stop also if in.fail() is true, not just if in.eof() is true.
I suspect that it matters little in practice, but who knows.
Wolfgang Bangerth [Thu, 3 Nov 2016 17:55:03 +0000 (11:55 -0600)]
Avoid a pointless comparison.
The function works in 3d, so checking for 'dim>1' makes no difference.
Wolfgang Bangerth [Thu, 3 Nov 2016 17:45:24 +0000 (11:45 -0600)]
Initialize member variables to invalid values.
Wolfgang Bangerth [Thu, 3 Nov 2016 17:43:38 +0000 (11:43 -0600)]
Initialize a member variable.
Timo Heister [Thu, 3 Nov 2016 17:32:14 +0000 (13:32 -0400)]
Merge pull request #3433 from bangerth/fix-DataOut-memory_consumption
Update memory consumption output.
Wolfgang Bangerth [Thu, 3 Nov 2016 17:18:28 +0000 (11:18 -0600)]
Merge pull request #3394 from drwells/pvs-function-lib-warnings
Silence a PVS studio warning about repeated code.
Wolfgang Bangerth [Thu, 3 Nov 2016 17:18:10 +0000 (11:18 -0600)]
Merge pull request #3395 from drwells/pvs-timestep-uninitialized-warning
Fix an member initialization PVS studio warning.
Wolfgang Bangerth [Thu, 3 Nov 2016 16:58:55 +0000 (11:58 -0500)]
Update memory consumption output.
Apparently, #3333 adds 96 bytes to the memory required by DataOut.
Wolfgang Bangerth [Thu, 3 Nov 2016 16:57:28 +0000 (11:57 -0500)]
Fix BlockVectorBase::memory_consumption.
The existing implementation forgot to add the memory required for
the std::vector of blocks, it only added the memory required for
the blocks themselves. It turns out that fixing this also allows
to simplify the code significantly.
Wolfgang Bangerth [Thu, 3 Nov 2016 16:39:47 +0000 (10:39 -0600)]
Make variable names uniform.
Specifically, in DataPostprocessor-derived classes in the tutorial programs,
use the names of function arguments that we also use in DataPostprocessor.
Denis Davydov [Thu, 3 Nov 2016 16:34:23 +0000 (17:34 +0100)]
Merge pull request #3430 from bangerth/rename-local-variables
Rename local variables.
Wolfgang Bangerth [Thu, 3 Nov 2016 16:32:28 +0000 (10:32 -0600)]
Rename local variables.
Instead of uh, duh, dduh, use standard names for variables.
Denis Davydov [Thu, 3 Nov 2016 16:19:37 +0000 (17:19 +0100)]
Merge pull request #3393 from davydden/mf_mass_n_q_points_1d
add n_q_points_1d template argument to MatrixFreeOperators::MassOperator
Martin Kronbichler [Thu, 3 Nov 2016 14:29:08 +0000 (15:29 +0100)]
Merge pull request #3391 from davydden/mf_base_diag_fixes
fix matrix-free unit tests due to a change to DiagonalMatrix in Base …
Bruno Turcksin [Thu, 3 Nov 2016 14:18:37 +0000 (10:18 -0400)]
Merge pull request #3428 from bangerth/remove-accidental-files
Remove accidentally added files.
Wolfgang Bangerth [Thu, 3 Nov 2016 14:16:35 +0000 (08:16 -0600)]
Remove accidentally added files.
David Wells [Thu, 3 Nov 2016 13:51:07 +0000 (09:51 -0400)]
Fix an member initialization PVS studio warning.
The variable is now initialized with the same logic used in the
'restart' function.
Denis Davydov [Thu, 3 Nov 2016 13:54:34 +0000 (14:54 +0100)]
use fe_degree+2 quadrature points in matrix_free/mass_operator_0x
David Wells [Thu, 3 Nov 2016 13:13:32 +0000 (09:13 -0400)]
Silence a PVS studio warning about repeated code.
What we had is correct, but this patch should fix the warning (and make
a little less work for the optimizer).
Denis Davydov [Thu, 3 Nov 2016 13:01:40 +0000 (14:01 +0100)]
add n_q_points_1d template argument to MatrixFreeOperators::MassOperator
the rationale is support different usage cases. Say, when projecting
a function one would use fe_degree+2. However when projecting the
MatrixFree quadrature data given by Table<>, most often this data
corresponds to fe_degree+1. So while being given a MatrixFree data
object, we use it even though the mass matrix could be slightly
under-integrated.
Denis Davydov [Thu, 3 Nov 2016 07:48:13 +0000 (08:48 +0100)]
fix matrix-free unit tests due to a change to DiagonalMatrix in Base class
while here, also use LaplaceOperator and add a few missing typedefs.
Karl Ljungkvist [Wed, 2 Nov 2016 07:35:04 +0000 (08:35 +0100)]
improve error output
Denis Davydov [Thu, 3 Nov 2016 06:43:55 +0000 (07:43 +0100)]
Merge pull request #3387 from bangerth/rename-variables
Rename local variables.
Denis Davydov [Thu, 3 Nov 2016 06:43:49 +0000 (07:43 +0100)]
Merge pull request #3385 from bangerth/initialize-variable-2
Initialize a member variable.
Denis Davydov [Thu, 3 Nov 2016 06:43:43 +0000 (07:43 +0100)]
Merge pull request #3384 from bangerth/initialize-variable
Initialize a member variable.
Denis Davydov [Thu, 3 Nov 2016 05:27:21 +0000 (06:27 +0100)]
Merge pull request #3390 from bangerth/fix-invalid-sizeof
Fix a nonsensical use of sizeof().
Wolfgang Bangerth [Thu, 3 Nov 2016 04:32:01 +0000 (23:32 -0500)]
Fix a nonsensical use of sizeof().
David Wells [Thu, 3 Nov 2016 02:50:00 +0000 (22:50 -0400)]
Merge pull request #3386 from bangerth/initialize-variable-3
Initialize a member variable.
Wolfgang Bangerth [Thu, 3 Nov 2016 01:51:17 +0000 (19:51 -0600)]
Rename local variables.
The variables in question have the same name as a function argument, and
are only used in a local block. They may as well be renamed.
Wolfgang Bangerth [Thu, 3 Nov 2016 01:45:38 +0000 (19:45 -0600)]
Initialize a member variable.
Also add a piece to the documentation of a member function.
Wolfgang Bangerth [Thu, 3 Nov 2016 01:44:26 +0000 (19:44 -0600)]
Initialize a member variable.
Wolfgang Bangerth [Thu, 3 Nov 2016 01:27:13 +0000 (19:27 -0600)]
Initialize a member variable.
David Wells [Wed, 2 Nov 2016 23:23:51 +0000 (19:23 -0400)]
Merge pull request #3383 from bangerth/remove-unused-variable
Remove SolverCG::res2.
David Wells [Wed, 2 Nov 2016 22:37:14 +0000 (18:37 -0400)]
Merge pull request #3381 from bangerth/remove-duplicate-variable
Remove a duplicate variable.
Wolfgang Bangerth [Wed, 2 Nov 2016 22:28:21 +0000 (16:28 -0600)]
Merge pull request #3333 from bangerth/update-DataPostprocessor-inputs
Update the way DataPostprocessor receives its input.
Wolfgang Bangerth [Mon, 31 Oct 2016 22:10:06 +0000 (16:10 -0600)]
Add changelog entry.
Wolfgang Bangerth [Mon, 31 Oct 2016 22:06:02 +0000 (16:06 -0600)]
Add a bunch of tests.
Wolfgang Bangerth [Mon, 31 Oct 2016 21:37:19 +0000 (15:37 -0600)]
Update the way DataPostprocessor receives its input.
In the past, the two functions we use to postprocess data got lists of arguments
for the solution, its derivatives, the evaluation points, and normal vectors.
This is not flexible enough: We can not easily add other information that
we have needed in the past or that users have requested, such as a pointer
to the cell we're currently on, or the material-id of the cell.
Rather than adding each possible argument anyone may want to use
individually to the list of the postprocessor function arguments, we use
a technique here that has proven useful in ASPECT: the functions simply
take a reference to a structure that contains these individual pieces
of information. We can extend the members of these structures without
backward compatibility issues because the functions still get a
reference to the same structure, we just grow the structure
itself. Functions that never used the new members of the structure
will continue to work as they always did.
Wolfgang Bangerth [Wed, 2 Nov 2016 21:30:09 +0000 (15:30 -0600)]
Remove SolverCG::res2.
This variable was only used inside the SolverCG::criterion() function that was
supposed to let derived classes overload when the solver terminates. But the
criterion() function was never called anywhere, so there is no point in
keeping it. Furthermore, the res2 variable it returns was never set. So
remove the whole shebang.
Denis Davydov [Wed, 2 Nov 2016 21:11:08 +0000 (22:11 +0100)]
Merge pull request #3382 from bangerth/initialize-member-variable
Initialize all member variables in a copy constructor.
Wolfgang Bangerth [Wed, 2 Nov 2016 21:09:48 +0000 (15:09 -0600)]
Initialize all member variables in a copy constructor.
Wolfgang Bangerth [Wed, 2 Nov 2016 21:03:32 +0000 (15:03 -0600)]
Remove a duplicate variable.
The variable already exists in the base class Function. We don't need to
duplicate it in the class FEFieldFunction.
Martin Kronbichler [Wed, 2 Nov 2016 20:39:19 +0000 (21:39 +0100)]
Merge pull request #3341 from davydden/diagonal_matrix
instantiate ConstraintMatrix::distribute_local_to_global() for Diagon…
Matthias Maier [Wed, 2 Nov 2016 19:59:15 +0000 (14:59 -0500)]
Merge pull request #3337 from kalj/cuda-default-off
Don't load cuda unless explicitly enabled
Denis Davydov [Wed, 2 Nov 2016 09:02:40 +0000 (10:02 +0100)]
instantiate ConstraintMatrix::distribute_local_to_global() for DiagonalMatrix
To that end, add a few missing functions to DiagonalMatrix and update
documentation.
Martin Kronbichler [Wed, 2 Nov 2016 18:54:18 +0000 (19:54 +0100)]
Merge pull request #3340 from davydden/mf_base_updates
use DiagonalMatrix in MatrixFreeOperators
Denis Davydov [Wed, 2 Nov 2016 07:34:37 +0000 (08:34 +0100)]
use DiagonalMatrix in MatrixFreeOperators::Base
To that end add a few missing function to DiagonalMatrix and also
switch to Jacobi preconditioner in VectorTools::project() from
quadrature points.
Karl Ljungkvist [Tue, 1 Nov 2016 16:01:00 +0000 (17:01 +0100)]
set default compute capability to 3.5, or check that something valid was specified
Karl Ljungkvist [Tue, 24 May 2016 23:04:38 +0000 (18:04 -0500)]
don't load cuda unless explicitly enabled
David Wells [Wed, 2 Nov 2016 00:33:09 +0000 (20:33 -0400)]
Merge pull request #3339 from Rombur/exception
Add an include file necessary when not using multithreading.
Bruno Turcksin [Tue, 1 Nov 2016 19:33:48 +0000 (15:33 -0400)]
Add an include file necessary when not using multithreading.
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