]>
https://gitweb.dealii.org/ - dealii.git/log
Wolfgang Bangerth [Mon, 16 Jan 2017 22:40:23 +0000 (15:40 -0700)]
Better document FE_PolyTensor.
Martin Kronbichler [Mon, 16 Jan 2017 21:43:12 +0000 (22:43 +0100)]
Merge pull request #3811 from drwells/symmetric-tensor-default-methods
Make SymmetricTensor trivially copyable.
David Wells [Mon, 16 Jan 2017 21:31:51 +0000 (16:31 -0500)]
Merge pull request #3809 from bangerth/document_FETools_compute_node_matrix
Document FETools::compute_node_matrix.
Wolfgang Bangerth [Mon, 16 Jan 2017 19:36:35 +0000 (12:36 -0700)]
Document FETools::compute_node_matrix.
David Wells [Mon, 16 Jan 2017 04:44:42 +0000 (23:44 -0500)]
Make SymmetricTensor trivially copyable.
This is a follow up to
0004f1cbcd2 which made Tensors trivially copyable.
Denis Davydov [Mon, 16 Jan 2017 14:13:27 +0000 (15:13 +0100)]
Merge pull request #3806 from davydden/pum_reference
fe_enriched: update bibtex reference
Denis Davydov [Mon, 16 Jan 2017 08:51:56 +0000 (09:51 +0100)]
fe_enriched: update bibtex reference
Martin Kronbichler [Mon, 16 Jan 2017 10:45:12 +0000 (11:45 +0100)]
Merge pull request #3805 from drwells/tensor-default-methods
Make Tensors trivially copyable.
David Wells [Sun, 15 Jan 2017 23:08:07 +0000 (18:08 -0500)]
Make Tensors trivially copyable.
The implicitly defined copy constructors and assignment operators are no
different from the ones implemented prior to this patch, so we can clean things
up a bit by just using the defaults here.
This has the nice effect of making the class "trivially copyable", which means
compilers may optimize things by using memcpy to copy things instead of the copy
constructor.
David Wells [Sun, 15 Jan 2017 21:36:27 +0000 (16:36 -0500)]
Merge pull request #3804 from Rombur/fix_shared_ptr
Fix a test.
Bruno Turcksin [Sun, 15 Jan 2017 20:45:38 +0000 (15:45 -0500)]
Fix a test.
Jean-Paul Pelteret [Sun, 15 Jan 2017 09:41:57 +0000 (10:41 +0100)]
Merge pull request #3803 from tamiko/a_default_parameter
Bugfix: Add forgotten default parameter to function
Martin Kronbichler [Sun, 15 Jan 2017 08:19:58 +0000 (09:19 +0100)]
Merge pull request #3801 from drwells/remove-Reference-friendship
Get rid of some unused friendship declarations.
Martin Kronbichler [Sun, 15 Jan 2017 08:18:48 +0000 (09:18 +0100)]
Merge pull request #3799 from kronbichler/master
Cleanup code in vectorization
Matthias Maier [Sun, 15 Jan 2017 08:08:52 +0000 (02:08 -0600)]
Bugfix: Add forgotten default parameter to function
One of the overloaded GridGenerator::subdivided_hyper_rectangle variants
has a missing default parameter for the last argument.
In reference to #3802
David Wells [Sun, 15 Jan 2017 02:53:53 +0000 (21:53 -0500)]
Get rid of some unused friendship declarations.
Clang warns about the second one with the following:
/home/drwells/Documents/Code/CPP/dealii-dev-clang/include/deal.II/lac/sparse_matrix.h:1645:93: warning:
dependent nested name specifier 'SparseMatrixIterators::Accessor<number2, false>::' for friend
class declaration is not supported; turning off access control for 'SparseMatrix'
[-Wunsupported-friend]
template <typename number2> friend class SparseMatrixIterators::Accessor<number2, false>::Reference;
Additionally, MSVC runs into errors with this friendship
declaration (and can compile the library without it), so we can get rid
of it.
David Wells [Sat, 14 Jan 2017 23:27:22 +0000 (18:27 -0500)]
Merge pull request #3800 from drwells/speed-up-test
Make a test run faster.
David Wells [Sat, 14 Jan 2017 21:25:01 +0000 (16:25 -0500)]
Make a test run faster.
This test previously tended to time out on clang in debug mode (it took
about 580 seconds). This commit skips an extra refinement level to get
the computation time down to about 70 seconds.
Martin Kronbichler [Sat, 14 Jan 2017 17:56:03 +0000 (18:56 +0100)]
Cleanup code in vectorization
Martin Kronbichler [Sat, 14 Jan 2017 17:47:43 +0000 (18:47 +0100)]
Merge pull request #3793 from bangerth/simplify-function
Simplify FE_BDM::get_dpo_vector() somewhat.
Wolfgang Bangerth [Sat, 14 Jan 2017 05:06:02 +0000 (22:06 -0700)]
Simplify FE_BDM::get_dpo_vector() somewhat.
In particular, make it a bit easier to read.
Matthias Maier [Sat, 14 Jan 2017 16:13:58 +0000 (10:13 -0600)]
Merge pull request #3797 from bangerth/make-compile
Make things compile again.
Wolfgang Bangerth [Sat, 14 Jan 2017 16:05:02 +0000 (09:05 -0700)]
Make things compile again.
Martin Kronbichler [Sat, 14 Jan 2017 11:27:23 +0000 (12:27 +0100)]
Merge pull request #3791 from bangerth/fix-abf
Fix the polynomial degree the ABF element reports about itself.
Martin Kronbichler [Sat, 14 Jan 2017 11:26:20 +0000 (12:26 +0100)]
Merge pull request #3796 from bangerth/make-function-safer
Add a few assertions to FETools::compute_node_matrix().
Martin Kronbichler [Sat, 14 Jan 2017 11:25:25 +0000 (12:25 +0100)]
Merge pull request #3795 from bangerth/indent-arguments
Indent function arguments to align them.
Martin Kronbichler [Sat, 14 Jan 2017 11:24:59 +0000 (12:24 +0100)]
Merge pull request #3794 from bangerth/fix-FE_PolyTensor
Guard access to mutable variables with a mutex.
Martin Kronbichler [Sat, 14 Jan 2017 11:21:39 +0000 (12:21 +0100)]
Merge pull request #3790 from kronbichler/cleanup_step-37
Cleanup step-37
Martin Kronbichler [Sat, 14 Jan 2017 11:20:42 +0000 (12:20 +0100)]
Merge pull request #3766 from kronbichler/improve_vectorized_array
Gather and scatter operations in vectorized array
Wolfgang Bangerth [Sat, 14 Jan 2017 05:17:52 +0000 (22:17 -0700)]
Add a few assertions to FETools::compute_node_matrix().
Wolfgang Bangerth [Sat, 14 Jan 2017 05:14:57 +0000 (22:14 -0700)]
Indent function arguments to align them.include/deal.II/fe/fe.h
Wolfgang Bangerth [Sat, 14 Jan 2017 05:13:01 +0000 (22:13 -0700)]
Add changelog entry.
Wolfgang Bangerth [Sat, 14 Jan 2017 05:09:48 +0000 (22:09 -0700)]
Guard access to mutable variables with a mutex.
Wolfgang Bangerth [Fri, 13 Jan 2017 22:39:44 +0000 (15:39 -0700)]
Add test.
Wolfgang Bangerth [Fri, 13 Jan 2017 22:32:29 +0000 (15:32 -0700)]
Add changelog entry.
Wolfgang Bangerth [Fri, 13 Jan 2017 22:29:50 +0000 (15:29 -0700)]
Fix the polynomial degree the ABF element reports about itself.
As stated in the original paper (http://www-users.math.umn.edu/~arnold/papers/vecquad.pdf),
section 5, and as also stated in our discussion of the PolynomialsABF element, the
ABF space of order 'r' actually contains polynomials of degree 'r+2'. Report this
accurately.
Without this, the computation of embedding matrices fails in 3d because we integrate
the least squares matrix terms with a quadrature formula of too low order.
Martin Kronbichler [Fri, 13 Jan 2017 20:15:52 +0000 (21:15 +0100)]
Merge pull request #3788 from masterleinad/check_add_indices_sizes
Check that add_indices respects index_space_size
Martin Kronbichler [Fri, 13 Jan 2017 17:47:45 +0000 (18:47 +0100)]
Cleanup step-37 regarding shared_ptr usage.
Martin Kronbichler [Fri, 13 Jan 2017 17:47:18 +0000 (18:47 +0100)]
Disable warning about deprecated functionality.
Martin Kronbichler [Fri, 13 Jan 2017 17:47:02 +0000 (18:47 +0100)]
Add additional access method to the underlying shared ptr
Bruno Turcksin [Fri, 13 Jan 2017 18:29:43 +0000 (13:29 -0500)]
Merge pull request #3786 from Rombur/documentation
Augment documentation for Triangulation.
Daniel Arndt [Fri, 13 Jan 2017 16:54:27 +0000 (17:54 +0100)]
Check that add_indices respects index_space_size
Bruno Turcksin [Fri, 13 Jan 2017 14:35:28 +0000 (09:35 -0500)]
Augment documentation for Triangulation.
Bruno Turcksin [Fri, 13 Jan 2017 13:44:47 +0000 (08:44 -0500)]
Merge pull request #3785 from tamiko/cuda_fixes_3
CMake: Various fixes for the cuda configuration
Matthias Maier [Fri, 13 Jan 2017 11:13:47 +0000 (05:13 -0600)]
CMake: Remove obsolete file
Daniel Arndt [Fri, 13 Jan 2017 10:14:41 +0000 (11:14 +0100)]
Merge pull request #3763 from elddle/Fix-get_ria_vector
Fix a get_ria_vector for FE_BDM
Matthias Maier [Fri, 13 Jan 2017 09:35:49 +0000 (03:35 -0600)]
Merge pull request #3761 from jppelteret/symm_tensor_contract_3
Add contract3() function with SymmetricTensor arguments.
Karl Ljungkvist [Fri, 13 Jan 2017 08:14:02 +0000 (09:14 +0100)]
remove forgotten dot
Matthias Maier [Thu, 12 Jan 2017 17:03:13 +0000 (11:03 -0600)]
add a changes file
Matthias Maier [Thu, 12 Jan 2017 17:00:30 +0000 (11:00 -0600)]
CMake: Make sure the cuda wrapper only uses -std=c++11
Matthias Maier [Thu, 12 Jan 2017 16:54:39 +0000 (10:54 -0600)]
CMake: Properly propagate all compiler flags to the cuda wrapper
Matthias Maier [Thu, 12 Jan 2017 16:34:42 +0000 (10:34 -0600)]
CMake: Rename all object targets to obj_<foo>_(debug|release)
This change is necessary to please the cuda wrapper nvcc that insists on
exporting the target name as preprocessor definition. Unfortunately, a
period "." is an invalid character and we end up with warnings of the
form
"missing whitespace after the macro name"
Fix this by renaming all object targets to only contain underscores.
Matthias Maier [Thu, 12 Jan 2017 16:24:07 +0000 (10:24 -0600)]
CMake: Avoid bogus preprocessor definitions
The macro CUDA_WARP_SRCS expects the target to have a set of
preprocessor definitions that does not contain an empty element.
Matthias Maier [Thu, 12 Jan 2017 15:46:50 +0000 (09:46 -0600)]
CMake: Fix a typo
Martin Kronbichler [Fri, 13 Jan 2017 08:01:34 +0000 (09:01 +0100)]
Merge pull request #3764 from Rombur/shared_ptr
Use shared_ptr to store MatrixFree data in MatrixFreeOperators::Base
Daniel Arndt [Thu, 12 Jan 2017 23:12:16 +0000 (00:12 +0100)]
Merge pull request #3778 from tamiko/add_a_boost_check
CMake: Define BOOST_NO_CXX11_HDR_UNORDERED_MAP for bundled boost if <gcc-4.8
Jean-Paul Pelteret [Thu, 12 Jan 2017 22:50:05 +0000 (23:50 +0100)]
Merge pull request #3777 from jppelteret/step-18-update_results
Update results for step-18
Jean-Paul Pelteret [Thu, 12 Jan 2017 13:06:26 +0000 (14:06 +0100)]
Update results for step-18
fixes #3757
Matthias Maier [Thu, 12 Jan 2017 22:20:22 +0000 (16:20 -0600)]
CMake: Refactor macros and augment comment
Matthias Maier [Thu, 12 Jan 2017 13:26:27 +0000 (07:26 -0600)]
CMake: Define BOOST_NO_CXX11_HDR_UNORDERED_MAP for bundled boost if <gcc-4.8
Closes #3624.
Wolfgang Bangerth [Thu, 12 Jan 2017 21:47:55 +0000 (14:47 -0700)]
Merge pull request #3779 from tamiko/cuda_fixes_1
CMake: let *_cuda targets depend on *.inst targets
elddle [Thu, 12 Jan 2017 16:46:08 +0000 (11:46 -0500)]
Fix get_ria_vector for BDM
David Wells [Thu, 12 Jan 2017 16:45:30 +0000 (11:45 -0500)]
Merge pull request #3783 from tjhei/fix_compressed_fe_index_is_active
fix hp fe_index_is_active()
Wolfgang Bangerth [Thu, 12 Jan 2017 16:40:25 +0000 (09:40 -0700)]
Merge pull request #3780 from drwells/doxygen-link-fixes
Doxygen link fixes
Wolfgang Bangerth [Thu, 12 Jan 2017 16:10:16 +0000 (09:10 -0700)]
Merge pull request #3781 from drwells/analogous-grammar-fix
Write 'is analogous to', not 'is analogy to'.
David Wells [Thu, 12 Jan 2017 15:08:20 +0000 (10:08 -0500)]
Fix some dead UNV links.
Timo Heister [Thu, 12 Jan 2017 15:50:43 +0000 (10:50 -0500)]
fix hp fe_index_is_active()
David Wells [Thu, 12 Jan 2017 15:23:53 +0000 (10:23 -0500)]
Write 'is analogous to', not 'is analogy to'.
Jean-Paul Pelteret [Tue, 10 Jan 2017 16:21:00 +0000 (17:21 +0100)]
Documentation update
Change ".." to "\ldots" in tensor and symmetric tensor documentation
Jean-Paul Pelteret [Tue, 10 Jan 2017 15:10:26 +0000 (16:10 +0100)]
Add contract3() function with SymmetricTensor arguments.
fixes #2691
Timo Heister [Thu, 12 Jan 2017 15:12:13 +0000 (10:12 -0500)]
Merge pull request #3776 from tamiko/fix_spaces_testsuite
CMake: Simplify run_test.sh and avoid array handling magic
David Wells [Thu, 12 Jan 2017 15:01:58 +0000 (10:01 -0500)]
Fix doxygen formatting of URLs with hyphens.
The script wrapcomments.py was previously allowed to split lines after hyphens
which results in broken links.
Matthias Maier [Thu, 12 Jan 2017 15:06:48 +0000 (09:06 -0600)]
CMake: let *_cuda targets depend on *.inst targets
Bruno Turcksin [Tue, 10 Jan 2017 23:08:04 +0000 (18:08 -0500)]
Use shared_ptr to store MatrixFree data in MatrixFreeOperators::Base
Matthias Maier [Thu, 12 Jan 2017 11:47:55 +0000 (05:47 -0600)]
CMake: Update DEAL_II_ADD_TEST macro
Matthias Maier [Thu, 12 Jan 2017 11:41:43 +0000 (05:41 -0600)]
CMake: Simplify run_test.sh and avoid array handling magic
Matthias Maier [Thu, 12 Jan 2017 11:43:12 +0000 (05:43 -0600)]
Merge pull request #3775 from kronbichler/fix_test_1
Fix test output
Martin Kronbichler [Thu, 12 Jan 2017 07:56:29 +0000 (08:56 +0100)]
Fix test output
Martin Kronbichler [Thu, 12 Jan 2017 05:58:36 +0000 (06:58 +0100)]
Merge pull request #3773 from kronbichler/mg_transfer_mf_legendre
Allow for FE_DGQLegendre in MGTransferMatrixFree
Martin Kronbichler [Thu, 12 Jan 2017 05:48:50 +0000 (06:48 +0100)]
Merge pull request #3771 from bangerth/fix-face-domination
Fix face domination between FE_Q and FE_DGQ.
Wolfgang Bangerth [Wed, 11 Jan 2017 20:19:50 +0000 (13:19 -0700)]
Add changelog entry.
Wolfgang Bangerth [Wed, 11 Jan 2017 20:19:47 +0000 (13:19 -0700)]
Add test.
Wolfgang Bangerth [Wed, 11 Jan 2017 20:18:32 +0000 (13:18 -0700)]
Fix face domination between FE_Q and FE_DGQ.
Right now, one got an answer if one asked the FE_DGQ whether or not
it dominates the FE_Q, but not the other way around. Make this symmetric.
While there, also include FE_DGP in the test.
Daniel Arndt [Thu, 12 Jan 2017 00:40:43 +0000 (01:40 +0100)]
Merge pull request #3770 from kronbichler/introduce_fe_dgq_legendre
Introduce FE_DGQLegendre and FE_DGQHermite
David Wells [Thu, 12 Jan 2017 00:09:45 +0000 (19:09 -0500)]
Merge pull request #3772 from bangerth/fix-type-mismatch
Fix missing 'spacedim' template argument.
Daniel Arndt [Wed, 11 Jan 2017 22:15:06 +0000 (23:15 +0100)]
Merge pull request #3768 from masterleinad/test_fe_mf
Implement function to check for MatrixFree support
Martin Kronbichler [Wed, 11 Jan 2017 22:04:15 +0000 (23:04 +0100)]
Merge pull request #3769 from kronbichler/fix_parallel_vector_comm
Change communication pattern in parallel vector.
Martin Kronbichler [Wed, 11 Jan 2017 21:58:42 +0000 (22:58 +0100)]
Allow for FE_DGQLegendre in MGTransferMatrixFree
Martin Kronbichler [Wed, 11 Jan 2017 18:14:45 +0000 (19:14 +0100)]
List incompatible change
Martin Kronbichler [Wed, 11 Jan 2017 18:14:34 +0000 (19:14 +0100)]
Add another test
Martin Kronbichler [Wed, 11 Jan 2017 17:49:02 +0000 (18:49 +0100)]
Introduce FE_DGQLegendre and FE_DGQHermite
Wolfgang Bangerth [Wed, 11 Jan 2017 20:27:08 +0000 (13:27 -0700)]
Add changelog entry.
Wolfgang Bangerth [Wed, 11 Jan 2017 20:26:56 +0000 (13:26 -0700)]
Fix missing 'spacedim' template argument.
Bruno Turcksin [Wed, 11 Jan 2017 19:55:17 +0000 (14:55 -0500)]
Merge pull request #3755 from jppelteret/fix_step-18_rotation_matrix
Fix rotation matrix definition in step-18
Daniel Arndt [Wed, 11 Jan 2017 17:40:21 +0000 (18:40 +0100)]
Merge pull request #3767 from kronbichler/chebyshev_common_vector_interface
Use common vector interface for Chebyshev smoother
Daniel Arndt [Mon, 9 Jan 2017 13:44:33 +0000 (14:44 +0100)]
Implement function to check for MatrixFree support
Martin Kronbichler [Wed, 11 Jan 2017 17:29:33 +0000 (18:29 +0100)]
Change communication pattern in parallel vector.
Martin Kronbichler [Wed, 11 Jan 2017 10:46:30 +0000 (11:46 +0100)]
Gather and scatter operations in vectorized array
Jean-Paul Pelteret [Mon, 9 Jan 2017 18:15:08 +0000 (19:15 +0100)]
Update step-18 to use rotation matrix defined in physics module.
Jean-Paul Pelteret [Mon, 9 Jan 2017 17:06:18 +0000 (18:06 +0100)]
Added functions to compute rotation matrices in 2d and 3d.
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