]>
https://gitweb.dealii.org/ - dealii.git/log
Matthias Maier [Thu, 6 Apr 2017 01:26:28 +0000 (20:26 -0500)]
CMake: Also check for enabled zlib support in p4est
Even though we might not necessarily use zlib compression in p4est
output at all, p4est might silently fail if zlib support is disabled.
Work around this issue by always requiring a p4est installation with
enabled zlib support.
Closes #4151
Wolfgang Bangerth [Tue, 4 Apr 2017 15:20:35 +0000 (09:20 -0600)]
Merge pull request #4181 from tjhei/r_8_5_pr_4180
[8.5] take over #4180: add step-57 DOI
Timo Heister [Tue, 4 Apr 2017 15:17:50 +0000 (11:17 -0400)]
add step-57 DOI
Wolfgang Bangerth [Tue, 4 Apr 2017 13:13:38 +0000 (07:13 -0600)]
Merge pull request #4179 from jppelteret/r_8_5-pr_4174
[8.5] take over #4174: Add DOI citation to step-44
Wolfgang Bangerth [Tue, 4 Apr 2017 13:13:24 +0000 (07:13 -0600)]
Merge pull request #4178 from jppelteret/r_8_5-pr_4145
[8.5] take over #4145: add @dealiiTutorialDOI{} macro for tutorial programs
Jean-Paul Pelteret [Mon, 3 Apr 2017 07:09:44 +0000 (09:09 +0200)]
Add DOI citation to step-44
Timo Heister [Thu, 30 Mar 2017 15:11:01 +0000 (11:11 -0400)]
add @dealiiTutorialDOI{} macro for tutorial programs
Wolfgang Bangerth [Tue, 4 Apr 2017 12:39:27 +0000 (06:39 -0600)]
Merge pull request #4177 from tjhei/r_8_5_pr4173
[8.5] take over #4173: change MathJax CDN
Timo Heister [Sun, 2 Apr 2017 17:12:25 +0000 (13:12 -0400)]
change MathJax CDN
https://cdn.mathjax.org is shutting down, so switch to the recommended alternative CDN.
Fixes #4169
Timo Heister [Fri, 31 Mar 2017 16:46:48 +0000 (12:46 -0400)]
Merge pull request #4159 from tamiko/pr_4157-8.5
[8.5] CMake: Workaround: Ensure "mpiuni/mpi.h" is reachable
Daniel Arndt [Fri, 31 Mar 2017 15:30:02 +0000 (17:30 +0200)]
Merge pull request #4166 from masterleinad/restrict_parallel_petsc_8_5
[8.5] take over #4165: Restrict tests requiring a parallel PETSc
Daniel Arndt [Fri, 31 Mar 2017 14:03:36 +0000 (16:03 +0200)]
Restrict tests requiring a parallel PETSc
Matthias Maier [Thu, 30 Mar 2017 22:38:47 +0000 (17:38 -0500)]
CMake: Workaround: Ensure "mpiuni/mpi.h" is reachable
In case of a sequential build without mpi support and sequential petsc a
dummy mpi.h file installed by petsc must be reachable in from our final
set of include directories.
Normally this is not an issue - petsc exports such information in the
file "petscvariables" that we parse. But some distributions have chosen
to not install this file...
Closes #4157
Wolfgang Bangerth [Fri, 31 Mar 2017 12:39:12 +0000 (06:39 -0600)]
Merge pull request #4164 from masterleinad/take_over_4156
[8.5] take over #4156: fix cmake regex for finding MPI version
Timo Heister [Thu, 30 Mar 2017 21:37:53 +0000 (17:37 -0400)]
fix cmake regex for finding MPI version
cmake regex is greedy, which means that the old regex
MPI_VERSION.*([0-9]+)
would only put the last digit of the version into the group \1 because
.* consumes the others. Fix this.
David Wells [Fri, 31 Mar 2017 03:40:28 +0000 (23:40 -0400)]
Merge pull request #4161 from tamiko/pr_4160-8.5
[8.5] Examples: Require MPI for step-18
Matthias Maier [Thu, 30 Mar 2017 23:28:12 +0000 (18:28 -0500)]
Merge pull request #4154 from tjhei/r_8_5_pr4152
[8.5] take over #4152: fix step-55
Matthias Maier [Thu, 30 Mar 2017 23:23:02 +0000 (18:23 -0500)]
Examples: Require MPI for step-18
Timo Heister [Thu, 30 Mar 2017 19:09:45 +0000 (15:09 -0400)]
fix step-55
This causes crashes with PETSc and solver convergence issues with
Trilinos with more than one rank.
Matthias Maier [Thu, 30 Mar 2017 19:03:30 +0000 (14:03 -0500)]
Merge pull request #4148 from tamiko/cmake_2.8.8_compatibility
CMake: Compatibility with 2.8.8, do not build examples per default
Matthias Maier [Thu, 30 Mar 2017 16:45:54 +0000 (11:45 -0500)]
CMake: Default to not building examples
Matthias Maier [Thu, 30 Mar 2017 16:40:57 +0000 (11:40 -0500)]
CMake: Bugfix: Ensure compatibility with cmake-2.8.8
Timo Heister [Thu, 30 Mar 2017 14:42:51 +0000 (10:42 -0400)]
Merge pull request #4144 from kronbichler/take_over_documentation
[8.5] Take over #4138: Update documentation of FEEvaluation
Martin Kronbichler [Thu, 30 Mar 2017 08:49:04 +0000 (10:49 +0200)]
Update documentation of FEEvaluation
Wolfgang Bangerth [Wed, 29 Mar 2017 13:18:56 +0000 (07:18 -0600)]
Merge pull request #4137 from drwells/fix-double-angle-bracket
Convert a template '>>' to a '> >'.
David Wells [Wed, 29 Mar 2017 13:06:25 +0000 (09:06 -0400)]
Convert a template '>>' to a '> >'.
Wolfgang Bangerth [Wed, 29 Mar 2017 12:11:57 +0000 (06:11 -0600)]
Merge pull request #4136 from masterleinad/takeover_astyle
[8.5] take over #4125: Update documentation on location of astyle.rc.
Wolfgang Bangerth [Wed, 29 Mar 2017 12:11:31 +0000 (06:11 -0600)]
Merge pull request #4135 from masterleinad/takeover_abf_03
[8.5] take over #4134: Fix test on some platforms
Simon Sticko [Tue, 28 Mar 2017 07:13:03 +0000 (09:13 +0200)]
Update documentation on location of astyle.rc.
Martin Kronbichler [Wed, 29 Mar 2017 07:18:55 +0000 (09:18 +0200)]
Fix test on some platforms
Daniel Arndt [Wed, 29 Mar 2017 00:14:27 +0000 (02:14 +0200)]
Merge pull request #4132 from drwells/fix-quick-tests-8.5
[8.5] take over #4131: Remove tests.h dependency from the quick tests.
David Wells [Tue, 28 Mar 2017 21:03:55 +0000 (17:03 -0400)]
Remove tests.h dependency from the quick tests.
The release candidates ship without this file.
Matthias Maier [Tue, 28 Mar 2017 17:01:43 +0000 (12:01 -0500)]
Merge pull request #4129 from drwells/add-user-version-flag
Always add the user version flag.
Martin Kronbichler [Tue, 28 Mar 2017 16:51:59 +0000 (18:51 +0200)]
Merge pull request #4130 from tjhei/r_8_5_pr4127
[8.5] take over #4127: Fix bug in matrix-free evaluation kernel for degree 9 in 2D
Martin Kronbichler [Tue, 28 Mar 2017 14:08:07 +0000 (16:08 +0200)]
Make the stack size selection a single parameter
Martin Kronbichler [Tue, 28 Mar 2017 10:11:49 +0000 (12:11 +0200)]
Fix bug in matrix-free evaluation kernel for degree 9 in 2D
David Wells [Tue, 28 Mar 2017 16:16:18 +0000 (12:16 -0400)]
Always add the user version flag.
This gets around a bug where, if a user requests '-std=c++03' and is using a
compiler which defaults to C++11 or newer (e.g., GCC 6) then the library is
compiled with the default language flag (e.g., gnu++14) but
DEAL_II_WITH_CXX11=OFF: this causes compilation errors with boost::optional.
Wolfgang Bangerth [Mon, 27 Mar 2017 21:48:35 +0000 (15:48 -0600)]
Merge pull request #4124 from tjhei/r_8_5_pr4122
[8.5] take over #4122: Avoid multiple deprecation warnings in steps
Timo Heister [Mon, 27 Mar 2017 19:32:56 +0000 (15:32 -0400)]
fix step-41 warning
Timo Heister [Mon, 27 Mar 2017 19:16:41 +0000 (15:16 -0400)]
Avoid multigrid deprecation warnings in step-16/39
Wolfgang Bangerth [Mon, 27 Mar 2017 18:47:59 +0000 (12:47 -0600)]
Merge pull request #4121 from tjhei/p8.5-doxygen
[8.5] fix doxygen errors
Timo Heister [Mon, 27 Mar 2017 18:43:09 +0000 (14:43 -0400)]
fix doxygen errors
Daniel Arndt [Mon, 27 Mar 2017 12:20:57 +0000 (14:20 +0200)]
Merge pull request #4118 from tamiko/remove_cuda
[8.5] CMake: Remove CUDA feature
Matthias Maier [Mon, 27 Mar 2017 01:41:28 +0000 (20:41 -0500)]
CMake: Remove CUDA feature
Daniel Arndt [Sun, 26 Mar 2017 21:58:56 +0000 (23:58 +0200)]
Merge pull request #4116 from bangerth/fix-abf-02
Fix FE_ABF::convert_generalized_support_point_values_to_nodal_values
Daniel Arndt [Sun, 26 Mar 2017 15:44:07 +0000 (17:44 +0200)]
Fix FE_ABF::convert_generalized_support_point_values_to_nodal_values
Timo Heister [Fri, 24 Mar 2017 21:26:53 +0000 (17:26 -0400)]
removed unfinished steps (release tasks step 8).
Timo Heister [Fri, 24 Mar 2017 21:04:01 +0000 (17:04 -0400)]
add AUTHORS
Wolfgang Bangerth [Fri, 24 Mar 2017 15:02:01 +0000 (09:02 -0600)]
Merge pull request #4112 from tjhei/r85_pr4108
[for 8.5] take over #4108: Make sure to clean all data before filling MG transfer data fields
Martin Kronbichler [Fri, 24 Mar 2017 08:55:25 +0000 (09:55 +0100)]
Make sure to clean all data before filling MG transfer data fields
Timo Heister [Thu, 23 Mar 2017 19:15:14 +0000 (15:15 -0400)]
update VERSION
Wolfgang Bangerth [Thu, 23 Mar 2017 18:40:24 +0000 (12:40 -0600)]
Merge pull request #4099 from tjhei/doxygen_fixes
8.5 task: doxygen formatting fixes
Wolfgang Bangerth [Thu, 23 Mar 2017 16:29:02 +0000 (10:29 -0600)]
Merge pull request #4100 from tjhei/tag_filename
8.5 task: update TAG file URL
Timo Heister [Thu, 23 Mar 2017 16:28:29 +0000 (12:28 -0400)]
address comment
Timo Heister [Thu, 23 Mar 2017 16:23:39 +0000 (12:23 -0400)]
Merge pull request #4098 from bangerth/update-changes-file
Replace individual files by one changelog for the whole release.
Wolfgang Bangerth [Thu, 23 Mar 2017 16:15:02 +0000 (10:15 -0600)]
Adjust for the upcoming release.
Wolfgang Bangerth [Thu, 23 Mar 2017 15:55:43 +0000 (09:55 -0600)]
Remove now obsolete files.
Wolfgang Bangerth [Thu, 23 Mar 2017 15:56:54 +0000 (09:56 -0600)]
Update the changelog file for the release.
Timo Heister [Thu, 23 Mar 2017 16:14:20 +0000 (12:14 -0400)]
Merge pull request #4101 from bangerth/update-copyright
Update copyright years.
Wolfgang Bangerth [Thu, 23 Mar 2017 16:08:23 +0000 (10:08 -0600)]
Update copyright years.
Timo Heister [Thu, 23 Mar 2017 16:07:21 +0000 (12:07 -0400)]
8.5 task: update TAG file URL
Daniel Arndt [Thu, 23 Mar 2017 16:02:10 +0000 (17:02 +0100)]
Merge pull request #4097 from masterleinad/check_cell_loop
Check array access in MatrixFree::cell_loop
Timo Heister [Thu, 23 Mar 2017 15:57:07 +0000 (11:57 -0400)]
doxygen formatting fixes
- wrong indentation
- code blocks not marked correctly
- some @ref fixes
Daniel Arndt [Thu, 23 Mar 2017 14:39:49 +0000 (15:39 +0100)]
Check array access in MatrixFree::cell_loop
Timo Heister [Thu, 23 Mar 2017 13:44:04 +0000 (09:44 -0400)]
Merge pull request #4096 from kronbichler/fix_clang_warning_mapping
Fix warning with clang compiler
Luca Heltai [Thu, 23 Mar 2017 12:32:30 +0000 (13:32 +0100)]
Merge pull request #4064 from bangerth/replace-FE_interpolate
Replace FE::interpolate() by FE::convert_support_point_values_to_nodal_values().
Martin Kronbichler [Thu, 23 Mar 2017 12:23:21 +0000 (13:23 +0100)]
Add warning with clang compiler
Wolfgang Bangerth [Wed, 22 Mar 2017 21:49:17 +0000 (15:49 -0600)]
Merge pull request #3886 from kronbichler/master
Fix support points on quad for MappingQGeneric and StraightBoundary.
Wolfgang Bangerth [Wed, 22 Mar 2017 21:34:46 +0000 (15:34 -0600)]
Merge pull request #4094 from masterleinad/fix_indexset_asc_etc
Refactor and fix IndexSet::is_ascending_and_one_to_one
Timo Heister [Wed, 22 Mar 2017 20:53:14 +0000 (16:53 -0400)]
Merge pull request #4095 from masterleinad/fix_sparsity_compress
Check access in SparsityPatter::compress()
Luca Heltai [Wed, 22 Mar 2017 20:01:58 +0000 (21:01 +0100)]
Merge pull request #4091 from tamiko/opencascade_compatibility
Opencascade 7 fixes
Martin Kronbichler [Wed, 22 Mar 2017 19:20:30 +0000 (20:20 +0100)]
Work on review comments
Martin Kronbichler [Sun, 19 Mar 2017 09:16:53 +0000 (10:16 +0100)]
Performance improvements. Augment documentation.
Luca Heltai [Wed, 22 Mar 2017 18:45:37 +0000 (19:45 +0100)]
Fixed closest_point_to_shape.
Luca Heltai [Wed, 22 Mar 2017 18:39:40 +0000 (19:39 +0100)]
Fixed circle_normal_projection.
Daniel Arndt [Wed, 22 Mar 2017 18:11:52 +0000 (19:11 +0100)]
Check access in SparsityPatter::compress()
Daniel Arndt [Wed, 22 Mar 2017 17:17:06 +0000 (18:17 +0100)]
Refactor and fix IndexSet::is_ascending_ad_one_to_one
Matthias Maier [Wed, 22 Mar 2017 02:16:54 +0000 (21:16 -0500)]
CMake: Add TKSTEP209 to the opencascade link interface
Matthias Maier [Tue, 21 Mar 2017 19:34:16 +0000 (14:34 -0500)]
tests/opencascade: Fix two tests
Matthias Maier [Tue, 21 Mar 2017 19:08:39 +0000 (14:08 -0500)]
Add a changes.h entry
Matthias Maier [Tue, 21 Mar 2017 19:00:04 +0000 (14:00 -0500)]
CMake: Extract opencascade version in a more robust manner
Matthias Maier [Tue, 21 Mar 2017 18:53:38 +0000 (13:53 -0500)]
Opencascade: Add an include for version 7 compatibility
Matthias Maier [Tue, 21 Mar 2017 18:52:24 +0000 (13:52 -0500)]
Opencascade: Bugfix. Call Handle macro in a compatible fashion
Matthias Maier [Tue, 21 Mar 2017 18:51:15 +0000 (13:51 -0500)]
Opencascade: Fix includes for version 7
Matthias Maier [Tue, 21 Mar 2017 18:12:31 +0000 (13:12 -0500)]
CMake: Add include/opencascade to include path alternatives
Martin Kronbichler [Mon, 20 Mar 2017 10:46:01 +0000 (11:46 +0100)]
Merge pull request #4086 from bangerth/improve-exception
Improve the wording of an exception.
Daniel Arndt [Sun, 19 Mar 2017 21:39:25 +0000 (22:39 +0100)]
Merge pull request #4087 from bangerth/update-reference
Update the reference to a paper that has been accepted.
Wolfgang Bangerth [Sun, 19 Mar 2017 21:31:18 +0000 (15:31 -0600)]
Update the reference to a paper that has been accepted.
Wolfgang Bangerth [Sun, 19 Mar 2017 21:28:08 +0000 (15:28 -0600)]
Improve the wording of an exception.
Wolfgang Bangerth [Tue, 14 Mar 2017 13:30:44 +0000 (07:30 -0600)]
Rename variables in a function.
Match variable names at a calling site to the ones used in the called function.
Wolfgang Bangerth [Tue, 14 Mar 2017 00:46:45 +0000 (18:46 -0600)]
Use FE::convert_generalized_support_point_values_to_nodal_values().
Wolfgang Bangerth [Mon, 13 Mar 2017 23:41:06 +0000 (17:41 -0600)]
Implement the new FiniteElement::convert_generalized_support_point_values_to_nodal_values interface.
This is easily done by copying the implementation of the
existing FiniteElement::interpolate() functions in the
various derived classes, removing the 'offset' argument,
and reordering+renaming the other two arguments.
Wolfgang Bangerth [Fri, 24 Feb 2017 19:41:32 +0000 (12:41 -0700)]
Introduce FiniteElement::convert_generalized_support_point_values_to_nodal_values.
Wolfgang Bangerth [Sun, 19 Mar 2017 17:48:40 +0000 (11:48 -0600)]
Merge pull request #4082 from masterleinad/restrict_lapackfmprint
Restrict LAPACKFullMatrix::print_formatted to matrix states
Daniel Arndt [Sat, 18 Mar 2017 16:50:32 +0000 (17:50 +0100)]
Restrict LAPACKFullMatrix::print_formatted to matrix states
Martin Kronbichler [Sun, 19 Mar 2017 09:32:40 +0000 (10:32 +0100)]
Merge pull request #4080 from tjhei/fe_field_func_parallel
Fix FEFieldFunction behavior for nonlocal cells
Martin Kronbichler [Sun, 19 Mar 2017 09:29:02 +0000 (10:29 +0100)]
Merge pull request #4083 from drwells/other-coverity-fixes
Other coverity fixes
Martin Kronbichler [Sun, 19 Mar 2017 09:16:41 +0000 (10:16 +0100)]
Add new test
Martin Kronbichler [Sun, 19 Mar 2017 06:54:46 +0000 (07:54 +0100)]
Add changelog
Martin Kronbichler [Fri, 17 Mar 2017 14:21:31 +0000 (15:21 +0100)]
Unify interpolation from surrounding points.
Query multiple points from mapping.
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