]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
6 years agoadd FiniteElement::get_sub_fe 5205/head
Timo Heister [Fri, 6 Oct 2017 18:46:06 +0000 (14:46 -0400)]
add FiniteElement::get_sub_fe

6 years agoMerge pull request #5170 from bangerth/fix-warning
Daniel Arndt [Thu, 28 Sep 2017 20:25:54 +0000 (22:25 +0200)]
Merge pull request #5170 from bangerth/fix-warning

Fix a warning about a missing return statement.

6 years agoFix a warning about a missing return statement. 5170/head
Wolfgang Bangerth [Thu, 28 Sep 2017 17:00:35 +0000 (11:00 -0600)]
Fix a warning about a missing return statement.

6 years agoMerge pull request #5154 from davydden/lapack_cholesky
Denis Davydov [Thu, 28 Sep 2017 16:13:26 +0000 (18:13 +0200)]
Merge pull request #5154 from davydden/lapack_cholesky

extend LAPACKFullMatrix to do Cholesky, inverse of SPD, norms and con…

6 years agoMerge pull request #5164 from bangerth/cleanups
Daniel Arndt [Thu, 28 Sep 2017 16:12:46 +0000 (18:12 +0200)]
Merge pull request #5164 from bangerth/cleanups

Two small cleanups in the code that computes hanging node constraints.

6 years agoMerge pull request #5168 from bangerth/doc-update
Daniel Arndt [Thu, 28 Sep 2017 15:35:08 +0000 (17:35 +0200)]
Merge pull request #5168 from bangerth/doc-update

Properly qualify a function name.

6 years agoMerge pull request #5106 from luca-heltai/extract-used-vertices
Wolfgang Bangerth [Thu, 28 Sep 2017 15:30:29 +0000 (09:30 -0600)]
Merge pull request #5106 from luca-heltai/extract-used-vertices

GridTools::extract_used_vertices

6 years agoProperly qualify a function name. 5168/head
Wolfgang Bangerth [Thu, 28 Sep 2017 15:29:06 +0000 (09:29 -0600)]
Properly qualify a function name.

6 years agoMerge pull request #5107 from eldarkh/fix-hp-rt-issues
Wolfgang Bangerth [Thu, 28 Sep 2017 15:28:03 +0000 (09:28 -0600)]
Merge pull request #5107 from eldarkh/fix-hp-rt-issues

More support for vector-valued hp FE spaces

6 years agoMerge pull request #5166 from luca-heltai/switch-order-sundials
Wolfgang Bangerth [Thu, 28 Sep 2017 13:29:36 +0000 (07:29 -0600)]
Merge pull request #5166 from luca-heltai/switch-order-sundials

Switch order of arguments in constructors for SUNDIALS::*

6 years agoMerge pull request #5074 from jwitte08/vectorized_tensor_product_matrix_sum
Martin Kronbichler [Thu, 28 Sep 2017 08:10:48 +0000 (10:10 +0200)]
Merge pull request #5074 from jwitte08/vectorized_tensor_product_matrix_sum

Vectorized tensor product matrix

6 years agoAdded a changelog entry. 5074/head
Julius Witte [Wed, 27 Sep 2017 11:32:17 +0000 (13:32 +0200)]
Added a changelog entry.

6 years agoSwitched order of arguments in SUNDIALS::* constructors. 5166/head
Luca Heltai [Thu, 28 Sep 2017 07:59:56 +0000 (09:59 +0200)]
Switched order of arguments in SUNDIALS::* constructors.

6 years agoMerge pull request #5165 from bangerth/simplify
David Wells [Wed, 27 Sep 2017 21:46:08 +0000 (17:46 -0400)]
Merge pull request #5165 from bangerth/simplify

Simplify some con/destructors by using =default.

6 years agoSimplify some con/destructors by using =default. 5165/head
Wolfgang Bangerth [Wed, 27 Sep 2017 19:40:05 +0000 (13:40 -0600)]
Simplify some con/destructors by using =default.

6 years agoMerge pull request #5149 from bangerth/more-hp-work
David Wells [Wed, 27 Sep 2017 17:35:53 +0000 (13:35 -0400)]
Merge pull request #5149 from bangerth/more-hp-work

More steps towards hp in parallel.

6 years agomove thread mutex 5154/head
Denis Davydov [Wed, 27 Sep 2017 14:47:01 +0000 (16:47 +0200)]
move thread mutex

6 years agoPrefer std::make_shared() over operator new(). 5164/head
Wolfgang Bangerth [Wed, 27 Sep 2017 16:57:05 +0000 (10:57 -0600)]
Prefer std::make_shared() over operator new().

6 years agominor documentation cleanup
Denis Davydov [Wed, 27 Sep 2017 08:34:53 +0000 (10:34 +0200)]
minor documentation cleanup

6 years agoSimplify some pieces of code.
Wolfgang Bangerth [Wed, 27 Sep 2017 14:47:57 +0000 (08:47 -0600)]
Simplify some pieces of code.

6 years agoReorder statements to avoid some computations when not necessary.
Wolfgang Bangerth [Tue, 26 Sep 2017 21:23:25 +0000 (15:23 -0600)]
Reorder statements to avoid some computations when not necessary.

6 years agoMerge pull request #5156 from luca-heltai/arkode
Wolfgang Bangerth [Wed, 27 Sep 2017 14:08:02 +0000 (08:08 -0600)]
Merge pull request #5156 from luca-heltai/arkode

ARKode interface.

6 years agoMerge pull request #5148 from tamiko/make_dealii_great_again
Luca Heltai [Wed, 27 Sep 2017 14:01:28 +0000 (16:01 +0200)]
Merge pull request #5148 from tamiko/make_dealii_great_again

Fix FindASSIMP.cmake and improve DEAL_II_DISABLE_EXTRA_DIAGNOSTICS

6 years agoMerge pull request #5162 from masterleinad/restrict_tests_p4est
Luca Heltai [Wed, 27 Sep 2017 14:00:45 +0000 (16:00 +0200)]
Merge pull request #5162 from masterleinad/restrict_tests_p4est

Restrict tests requiring p4est

6 years agoFixed WB comments. 5106/head
Luca Heltai [Wed, 27 Sep 2017 13:41:08 +0000 (15:41 +0200)]
Fixed WB comments.

6 years agoGridTools::find_closest_vertex with mapping argument.
Luca Heltai [Tue, 19 Sep 2017 14:37:50 +0000 (16:37 +0200)]
GridTools::find_closest_vertex with mapping argument.

6 years agoAdded test with MappingQEulerian.
Luca Heltai [Tue, 19 Sep 2017 13:22:45 +0000 (15:22 +0200)]
Added test with MappingQEulerian.

6 years agoGridTools::find_closest_vertex(map, point)
Luca Heltai [Tue, 19 Sep 2017 12:49:28 +0000 (14:49 +0200)]
GridTools::find_closest_vertex(map, point)

6 years agoNew GridTools::extract_used_vertices function.
Luca Heltai [Mon, 18 Sep 2017 15:35:17 +0000 (17:35 +0200)]
New GridTools::extract_used_vertices function.

6 years agoMerge pull request #5159 from bangerth/doc-update
Luca Heltai [Wed, 27 Sep 2017 12:51:17 +0000 (14:51 +0200)]
Merge pull request #5159 from bangerth/doc-update

Update documentation in VectorMemory and derived classes.

6 years agodeal2lkit -> deal.II, 2015 -> 2017 5156/head
Luca Heltai [Wed, 27 Sep 2017 12:41:07 +0000 (14:41 +0200)]
deal2lkit -> deal.II, 2015 -> 2017

6 years agoChangeLog.
Luca Heltai [Wed, 27 Sep 2017 12:36:31 +0000 (14:36 +0200)]
ChangeLog.

6 years agoBrusselator test with jacobian.
Luca Heltai [Wed, 27 Sep 2017 12:33:48 +0000 (14:33 +0200)]
Brusselator test with jacobian.

6 years agoTest all nonjacobian interfaces.
Luca Heltai [Wed, 27 Sep 2017 10:53:16 +0000 (12:53 +0200)]
Test all nonjacobian interfaces.

6 years agoARKode interface.
Luca Heltai [Tue, 26 Sep 2017 14:45:49 +0000 (16:45 +0200)]
ARKode interface.

6 years agoAdd ARKode to FindSUNDIALS.
Luca Heltai [Tue, 26 Sep 2017 14:45:36 +0000 (16:45 +0200)]
Add ARKode to FindSUNDIALS.

6 years agoMerge pull request #5163 from masterleinad/unused_param_param_acceptor
Daniel Arndt [Wed, 27 Sep 2017 12:01:35 +0000 (14:01 +0200)]
Merge pull request #5163 from masterleinad/unused_param_param_acceptor

Remove unused parameter

6 years agoMerge pull request #5153 from bangerth/avoid-raw-pointers
Luca Heltai [Wed, 27 Sep 2017 11:04:23 +0000 (13:04 +0200)]
Merge pull request #5153 from bangerth/avoid-raw-pointers

Avoid raw pointers in SUNDIALS IDA interfaces.

6 years agoMerge pull request #5161 from drwells/add-deal-ii-with-petsc-with-hypre
Denis Davydov [Wed, 27 Sep 2017 11:02:09 +0000 (13:02 +0200)]
Merge pull request #5161 from drwells/add-deal-ii-with-petsc-with-hypre

Add DEAL_II_PETSC_WITH_HYPRE.

6 years agoRemove unused parameter 5163/head
Daniel Arndt [Wed, 27 Sep 2017 10:16:51 +0000 (12:16 +0200)]
Remove unused parameter

6 years agoRestrict tests requiring p4est 5162/head
Daniel Arndt [Wed, 27 Sep 2017 10:12:40 +0000 (12:12 +0200)]
Restrict tests requiring p4est

6 years agoa changelog for LAPACKSupport::Property
Denis Davydov [Wed, 27 Sep 2017 07:10:23 +0000 (09:10 +0200)]
a changelog for LAPACKSupport::Property

6 years agouse Testing::rand() to generate matrices
Denis Davydov [Wed, 27 Sep 2017 07:09:54 +0000 (09:09 +0200)]
use Testing::rand() to generate matrices

6 years agoadd a changelog
Denis Davydov [Tue, 26 Sep 2017 14:24:23 +0000 (16:24 +0200)]
add a changelog

6 years agoadd thread mutex to const functions which use mutable variables
Denis Davydov [Tue, 26 Sep 2017 14:00:32 +0000 (16:00 +0200)]
add thread mutex to const functions which use mutable variables

6 years agoextend LAPACKFullMatrix to do Cholesky, inverse of SPD, norms and condition number...
Denis Davydov [Tue, 26 Sep 2017 13:40:07 +0000 (15:40 +0200)]
extend LAPACKFullMatrix to do Cholesky, inverse of SPD, norms and condition number estimate

6 years agoAdd DEAL_II_WITH_PETSC_WITH_HYPRE. 5161/head
David Wells [Wed, 27 Sep 2017 00:34:14 +0000 (20:34 -0400)]
Add DEAL_II_WITH_PETSC_WITH_HYPRE.

This does not change any functionality but does make it easier to
disable (or enable) tests based on the availability of hypre within
PETSc.

6 years agoFix flux_sparsity and project_boundary_values for vector-valued hp objects 5107/head
Eldar Khattatov [Tue, 26 Sep 2017 22:43:52 +0000 (18:43 -0400)]
Fix flux_sparsity and project_boundary_values for vector-valued hp objects

6 years agoMerge pull request #4994 from jppelteret/petsc_mumps
David Wells [Tue, 26 Sep 2017 22:04:57 +0000 (18:04 -0400)]
Merge pull request #4994 from jppelteret/petsc_mumps

Setup and use DEAL_II_PETSC_WITH_MUMPS in PETSc solver.

6 years agoMerge pull request #5158 from bangerth/avoid-raw-pointers-2
Daniel Arndt [Tue, 26 Sep 2017 21:55:15 +0000 (23:55 +0200)]
Merge pull request #5158 from bangerth/avoid-raw-pointers-2

Avoid raw pointers in favor of VectorMemory::Pointer in SolverQMRS.

6 years agoUpdate documentation in VectorMemory and derived classes. 5159/head
Wolfgang Bangerth [Tue, 26 Sep 2017 19:08:49 +0000 (13:08 -0600)]
Update documentation in VectorMemory and derived classes.

6 years agoAvoid raw pointers in favor of VectorMemory::Pointer in SolverQMRS. 5158/head
Wolfgang Bangerth [Tue, 26 Sep 2017 18:59:47 +0000 (12:59 -0600)]
Avoid raw pointers in favor of VectorMemory::Pointer in SolverQMRS.

6 years agoMerge pull request #5116 from luca-heltai/parameter-acceptor
Luca Heltai [Tue, 26 Sep 2017 17:27:31 +0000 (19:27 +0200)]
Merge pull request #5116 from luca-heltai/parameter-acceptor

ParameterAcceptor.

6 years agoMerge pull request #5157 from tjhei/step56-template-naming
Wolfgang Bangerth [Tue, 26 Sep 2017 17:20:11 +0000 (11:20 -0600)]
Merge pull request #5157 from tjhei/step56-template-naming

minor: step-56: consistent template arg naming

6 years agoAdded initialize with input_stream, and optional prm. 5116/head
Luca Heltai [Mon, 25 Sep 2017 11:49:13 +0000 (13:49 +0200)]
Added initialize with input_stream, and optional prm.

6 years agoAdded default prm to add_parameter().
Luca Heltai [Wed, 20 Sep 2017 15:04:15 +0000 (17:04 +0200)]
Added default prm to add_parameter().

6 years agoChangelog.
Luca Heltai [Wed, 20 Sep 2017 12:22:04 +0000 (14:22 +0200)]
Changelog.

6 years agoTest for path handling.
Luca Heltai [Wed, 20 Sep 2017 12:13:02 +0000 (14:13 +0200)]
Test for path handling.

6 years agoTest failing custom format in output.
Luca Heltai [Wed, 20 Sep 2017 10:24:57 +0000 (12:24 +0200)]
Test failing custom format in output.

6 years agoTest tex output.
Luca Heltai [Wed, 20 Sep 2017 10:05:59 +0000 (12:05 +0200)]
Test tex output.

6 years agoTest xml format.
Luca Heltai [Wed, 20 Sep 2017 10:01:30 +0000 (12:01 +0200)]
Test xml format.

6 years agoTest global section names.
Luca Heltai [Wed, 20 Sep 2017 09:52:37 +0000 (11:52 +0200)]
Test global section names.

6 years agoTest with Point<dim>.
Luca Heltai [Wed, 20 Sep 2017 09:46:58 +0000 (11:46 +0200)]
Test with Point<dim>.

6 years agoTest Using add parameter.
Luca Heltai [Wed, 20 Sep 2017 09:43:43 +0000 (11:43 +0200)]
Test Using add parameter.

6 years agoParameterAcceptor class.
Luca Heltai [Wed, 20 Sep 2017 09:27:19 +0000 (11:27 +0200)]
ParameterAcceptor class.

6 years agominor: step-56: consistent template arg naming 5157/head
Timo Heister [Tue, 26 Sep 2017 17:18:47 +0000 (13:18 -0400)]
minor: step-56: consistent template arg naming

6 years agoMerge pull request #5152 from bangerth/minor-updates
Timo Heister [Tue, 26 Sep 2017 01:20:10 +0000 (21:20 -0400)]
Merge pull request #5152 from bangerth/minor-updates

Better document MPILogInitAll.

6 years agoAvoid raw pointers in SUNDIALS IDA interfaces. 5153/head
Wolfgang Bangerth [Tue, 26 Sep 2017 00:35:52 +0000 (18:35 -0600)]
Avoid raw pointers in SUNDIALS IDA interfaces.

6 years agoBetter document MPILogInitAll. 5152/head
Wolfgang Bangerth [Mon, 25 Sep 2017 23:48:12 +0000 (17:48 -0600)]
Better document MPILogInitAll.

6 years agoProvide output from all processors. 5149/head
Wolfgang Bangerth [Mon, 25 Sep 2017 23:39:04 +0000 (17:39 -0600)]
Provide output from all processors.

6 years agoAdd a test.
Wolfgang Bangerth [Mon, 25 Sep 2017 21:51:47 +0000 (15:51 -0600)]
Add a test.

6 years agoAdd another warning to DEAL_II_DISABLE_EXTRA_DIAGNOSTICS 5148/head
Matthias Maier [Mon, 25 Sep 2017 21:43:50 +0000 (16:43 -0500)]
Add another warning to DEAL_II_DISABLE_EXTRA_DIAGNOSTICS

6 years agoCMake: Make FindASSIMP.cmake more pretty
Matthias Maier [Mon, 25 Sep 2017 21:35:33 +0000 (16:35 -0500)]
CMake: Make FindASSIMP.cmake more pretty

 - use DEAL_II_FIND_PATH to set up include directory
 - don't use tabs :-)

6 years agoMerge pull request #5146 from masterleinad/fix_multigrid_lapack
David Wells [Mon, 25 Sep 2017 19:59:16 +0000 (15:59 -0400)]
Merge pull request #5146 from masterleinad/fix_multigrid_lapack

Restrict multigrid tests to only run with LAPACK

6 years agoMerge pull request #5147 from masterleinad/fix_utilities
David Wells [Mon, 25 Sep 2017 19:58:55 +0000 (15:58 -0400)]
Merge pull request #5147 from masterleinad/fix_utilities

Restrict lac/utilities_02 to only run with LAPACK

6 years agoMerge pull request #5140 from masterleinad/array_view_cbegin
David Wells [Mon, 25 Sep 2017 19:58:01 +0000 (15:58 -0400)]
Merge pull request #5140 from masterleinad/array_view_cbegin

Introduce ArrayView::cbegin and ArrayView::cend

6 years agoExclude interfaces to ghost cells from DoF index unification.
Wolfgang Bangerth [Thu, 21 Sep 2017 20:05:33 +0000 (14:05 -0600)]
Exclude interfaces to ghost cells from DoF index unification.

6 years agoRestrict lac/utilities_02 to only run with LAPACK 5147/head
Daniel Arndt [Mon, 25 Sep 2017 12:48:41 +0000 (14:48 +0200)]
Restrict lac/utilities_02 to only run with LAPACK

6 years agoRestrict multigrid tests to only run with LAPACK 5146/head
Daniel Arndt [Mon, 25 Sep 2017 12:27:34 +0000 (14:27 +0200)]
Restrict multigrid tests to only run with LAPACK

6 years agoMerge pull request #5144 from tamiko/disable_tests
Daniel Arndt [Mon, 25 Sep 2017 08:29:00 +0000 (10:29 +0200)]
Merge pull request #5144 from tamiko/disable_tests

Temporarily disable two tests

6 years agoTemporarily disable two tests 5144/head
Matthias Maier [Mon, 25 Sep 2017 04:38:20 +0000 (23:38 -0500)]
Temporarily disable two tests

Closes #5126
Closes #5128
In reference to #4857

6 years agoMerge pull request #5124 from GivAlz/BBoxMerge
Wolfgang Bangerth [Mon, 25 Sep 2017 01:39:32 +0000 (19:39 -0600)]
Merge pull request #5124 from GivAlz/BBoxMerge

Added functions merge_with and volume to BoundingBox

6 years agoMerge pull request #5143 from drwells/move-vector-length
Wolfgang Bangerth [Mon, 25 Sep 2017 01:30:23 +0000 (19:30 -0600)]
Merge pull request #5143 from drwells/move-vector-length

Move a function out of an anonymous namespace.

6 years agoMerge pull request #5142 from davydden/oversubscribe
Wolfgang Bangerth [Mon, 25 Sep 2017 00:57:25 +0000 (18:57 -0600)]
Merge pull request #5142 from davydden/oversubscribe

explicitly oversubscribe with MPI

6 years agoMerge pull request #5135 from davydden/python_wrappers_warnings
Bruno Turcksin [Mon, 25 Sep 2017 00:15:28 +0000 (20:15 -0400)]
Merge pull request #5135 from davydden/python_wrappers_warnings

fix Python wrappers warnings

6 years agoMerge pull request #5137 from davydden/missing_instantiations_2
David Wells [Sun, 24 Sep 2017 21:00:00 +0000 (17:00 -0400)]
Merge pull request #5137 from davydden/missing_instantiations_2

add missing instantiations of DataOutBase::write_filtered_data

6 years agoMove a function out of an anonymous namespace. 5143/head
David Wells [Sun, 24 Sep 2017 19:38:52 +0000 (15:38 -0400)]
Move a function out of an anonymous namespace.

We only call this function in debug mode right now, so the compiler
complains (in release mode) that we have an unused function.

6 years agoMerge pull request #5134 from davydden/slepc_fix_test
Denis Davydov [Sun, 24 Sep 2017 16:54:19 +0000 (18:54 +0200)]
Merge pull request #5134 from davydden/slepc_fix_test

increase precision in Slepc SHEP test to avoid missed eigenpairs

6 years agoexplicitly oversubscribe with MPI 5142/head
Denis Davydov [Sun, 24 Sep 2017 16:09:48 +0000 (18:09 +0200)]
explicitly oversubscribe with MPI

6 years agoMerge pull request #5136 from davydden/missing_instantiations_1
Daniel Arndt [Sun, 24 Sep 2017 13:00:49 +0000 (15:00 +0200)]
Merge pull request #5136 from davydden/missing_instantiations_1

add missing instantiation for ConstraintMatrix::distribute_local_to_g…

6 years agoMerge pull request #5129 from davydden/fe_move_tests
Daniel Arndt [Sun, 24 Sep 2017 10:25:47 +0000 (12:25 +0200)]
Merge pull request #5129 from davydden/fe_move_tests

additional output for fe_move on macOS

6 years agoChangelog entry 5140/head
Daniel Arndt [Sun, 24 Sep 2017 09:30:48 +0000 (11:30 +0200)]
Changelog entry

6 years agoIntroduce ArrayView::cbegin and ArrayView::cend
Daniel Arndt [Sun, 24 Sep 2017 09:15:00 +0000 (11:15 +0200)]
Introduce ArrayView::cbegin and ArrayView::cend

6 years agoMerge branch 'master' into BBoxMerge 5124/head
Giovanni Alzetta [Sun, 24 Sep 2017 09:08:01 +0000 (11:08 +0200)]
Merge branch 'master' into BBoxMerge

6 years agoAdded functions merge_with and volume to BoundingBox
Giovanni Alzetta [Fri, 22 Sep 2017 11:31:47 +0000 (11:31 +0000)]
Added functions merge_with and volume to BoundingBox

6 years agoadd missing instantiation for ConstraintMatrix::distribute_local_to_global() 5136/head
Denis Davydov [Sun, 24 Sep 2017 06:42:46 +0000 (08:42 +0200)]
add missing instantiation for ConstraintMatrix::distribute_local_to_global()

6 years agoadd missing instantiations of DataOutBase::write_filtered_data 5137/head
Denis Davydov [Sun, 24 Sep 2017 07:03:44 +0000 (09:03 +0200)]
add missing instantiations of DataOutBase::write_filtered_data

6 years agoremove unused variable in TriangulationWrapper 5135/head
Denis Davydov [Sun, 24 Sep 2017 05:04:54 +0000 (07:04 +0200)]
remove unused variable in TriangulationWrapper

6 years agofix a warning in python wrappers
Denis Davydov [Sun, 24 Sep 2017 05:04:09 +0000 (07:04 +0200)]
fix a warning in python wrappers

6 years agoincrease precision in Slepc SHEP test to avoid missed eigenpairs 5134/head
Denis Davydov [Sat, 23 Sep 2017 21:40:39 +0000 (23:40 +0200)]
increase precision in Slepc SHEP test to avoid missed eigenpairs


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