]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
6 years agoAvoid warnings regarding comparisons between signed and unsigned variables 5568/head
Daniel Arndt [Sun, 3 Dec 2017 00:20:38 +0000 (01:20 +0100)]
Avoid warnings regarding comparisons between signed and unsigned variables

6 years agoMerge pull request #5566 from kronbichler/revert_rtuc_long_double
Martin Kronbichler [Sat, 2 Dec 2017 20:12:57 +0000 (21:12 +0100)]
Merge pull request #5566 from kronbichler/revert_rtuc_long_double

Revert Mapping::transform_real_to_unit_cell to long double.

6 years agoRevert Mapping::transform_real_to_unit_cell to long double. 5566/head
Martin Kronbichler [Sat, 2 Dec 2017 17:30:40 +0000 (18:30 +0100)]
Revert Mapping::transform_real_to_unit_cell to long double.

6 years agoMerge pull request #5563 from sairajat/fix-docu
Martin Kronbichler [Sat, 2 Dec 2017 12:39:46 +0000 (13:39 +0100)]
Merge pull request #5563 from sairajat/fix-docu

Fix documentation for face support points in fe

6 years agoFix documentation for face support points in fe 5563/head
RAJAT ARORA [Sat, 2 Dec 2017 08:53:24 +0000 (03:53 -0500)]
Fix documentation for face support points in fe

6 years agoMerge pull request #5544 from bangerth/cleanup
Daniel Arndt [Sat, 2 Dec 2017 08:31:05 +0000 (09:31 +0100)]
Merge pull request #5544 from bangerth/cleanup

Minor cleanups to FE_FaceQ.

6 years agoMerge pull request #5561 from bangerth/fix-tests
Daniel Arndt [Fri, 1 Dec 2017 23:57:21 +0000 (00:57 +0100)]
Merge pull request #5561 from bangerth/fix-tests

Fix a number of failing tests.

6 years agoAdjust one test. 5544/head
Wolfgang Bangerth [Fri, 1 Dec 2017 23:54:51 +0000 (16:54 -0700)]
Adjust one test.

6 years agoFix a number of failing tests. 5561/head
Wolfgang Bangerth [Fri, 1 Dec 2017 23:39:46 +0000 (16:39 -0700)]
Fix a number of failing tests.

These tests, for a variety of reasons, no longer compiled. I believe that most of
the issues were introduced in #5547. This fixes them.

6 years agoMerge pull request #5505 from davydden/dense_parallel
Wolfgang Bangerth [Fri, 1 Dec 2017 23:20:54 +0000 (16:20 -0700)]
Merge pull request #5505 from davydden/dense_parallel

add wrappers for ScaLAPACK

6 years agoMerge pull request #5559 from kronbichler/fix_mapping_q1_real_to_unit_singular
Wolfgang Bangerth [Fri, 1 Dec 2017 23:07:16 +0000 (16:07 -0700)]
Merge pull request #5559 from kronbichler/fix_mapping_q1_real_to_unit_singular

Fix singularity (FPE) in MappingQ1::transform_real_to_unit_cell

6 years agoMerge pull request #5533 from bangerth/update-instructions
Denis Davydov [Fri, 1 Dec 2017 18:09:47 +0000 (19:09 +0100)]
Merge pull request #5533 from bangerth/update-instructions

Tell users to build with ZOLTAN.

6 years agoMerge pull request #5547 from masterleinad/p_s_zoltan_default
Denis Davydov [Fri, 1 Dec 2017 18:08:13 +0000 (19:08 +0100)]
Merge pull request #5547 from masterleinad/p_s_zoltan_default

Make partition_zoltan the default choice for p::s::Triangulation

6 years agoMerge pull request #5560 from masterleinad/rand_signed_overflow
Daniel Arndt [Fri, 1 Dec 2017 16:29:26 +0000 (17:29 +0100)]
Merge pull request #5560 from masterleinad/rand_signed_overflow

Avoid signed integer overflow in Testing::rand

6 years agoAvoid signed integer overflow in Testing::rand 5560/head
Daniel Arndt [Fri, 1 Dec 2017 13:50:59 +0000 (14:50 +0100)]
Avoid signed integer overflow in Testing::rand

6 years agoAdd test case. 5559/head
Martin Kronbichler [Fri, 1 Dec 2017 08:42:33 +0000 (09:42 +0100)]
Add test case.

6 years agoAdd changelog
Martin Kronbichler [Fri, 1 Dec 2017 08:42:11 +0000 (09:42 +0100)]
Add changelog

6 years agoFix singularity (FPE) in MappingQ1::real_to_unit_cell.
Martin Kronbichler [Fri, 1 Dec 2017 08:41:59 +0000 (09:41 +0100)]
Fix singularity (FPE) in MappingQ1::real_to_unit_cell.

6 years agoMake sure to not call p::s::Triangulation with a default partitioner in the tests 5547/head
Daniel Arndt [Thu, 30 Nov 2017 16:28:12 +0000 (17:28 +0100)]
Make sure to not call p::s::Triangulation with a default partitioner in the tests

6 years agoMerge pull request #5556 from Rombur/arpack_2
Timo Heister [Thu, 30 Nov 2017 15:09:50 +0000 (10:09 -0500)]
Merge pull request #5556 from Rombur/arpack_2

Remove Doxygen markers inside ArpackSolver::solve

6 years agoRemove Doxygen markers inside ArpackSolver::solve 5556/head
Bruno Turcksin [Thu, 30 Nov 2017 14:46:47 +0000 (09:46 -0500)]
Remove Doxygen markers inside ArpackSolver::solve

6 years agoMerge pull request #5553 from Rombur/arpack
Denis Davydov [Thu, 30 Nov 2017 12:35:09 +0000 (13:35 +0100)]
Merge pull request #5553 from Rombur/arpack

Improve documentation of Arpack

6 years agoMerge pull request #5555 from bangerth/doc-update
Denis Davydov [Thu, 30 Nov 2017 09:42:16 +0000 (10:42 +0100)]
Merge pull request #5555 from bangerth/doc-update

Update function documentation.

6 years agoMerge pull request #5554 from adamqc/fix-base-name
Daniel Arndt [Thu, 30 Nov 2017 08:09:17 +0000 (09:09 +0100)]
Merge pull request #5554 from adamqc/fix-base-name

Fix bug in JobIdentifier::base_name.

6 years agoUpdate function documentation. 5555/head
Wolfgang Bangerth [Thu, 30 Nov 2017 06:02:06 +0000 (23:02 -0700)]
Update function documentation.

6 years agoFix bug in JobIdentifier::base_name. 5554/head
Ce Qin [Thu, 30 Nov 2017 04:35:50 +0000 (12:35 +0800)]
Fix bug in JobIdentifier::base_name.

6 years agoImprove documentation of ArpackSolver::AdditionalData 5553/head
Bruno Turcksin [Wed, 29 Nov 2017 19:33:28 +0000 (14:33 -0500)]
Improve documentation of ArpackSolver::AdditionalData

6 years agoRemove Doxygen marker of commens inside the solve function
Bruno Turcksin [Wed, 29 Nov 2017 19:32:41 +0000 (14:32 -0500)]
Remove Doxygen marker of commens inside the solve function

6 years agoMerge pull request #5551 from jodlbauer/fix_reduction_control
Daniel Arndt [Wed, 29 Nov 2017 16:34:04 +0000 (17:34 +0100)]
Merge pull request #5551 from jodlbauer/fix_reduction_control

fixed history in ReductionControl::check() for final iteration

6 years agorun quick test with 5 cores 5505/head
Denis Davydov [Wed, 29 Nov 2017 13:01:01 +0000 (14:01 +0100)]
run quick test with 5 cores

6 years agocleanup public interface
Denis Davydov [Wed, 29 Nov 2017 12:58:09 +0000 (13:58 +0100)]
cleanup public interface

6 years agoadded avg reduction test to solver_control_02 5551/head
jodlbauer [Wed, 29 Nov 2017 12:53:14 +0000 (13:53 +0100)]
added avg reduction test to solver_control_02

6 years agoindentation
jodlbauer [Wed, 29 Nov 2017 12:14:09 +0000 (13:14 +0100)]
indentation

6 years agofixed history in ReductionControl::check() for final iteration
jodlbauer [Wed, 29 Nov 2017 11:49:07 +0000 (12:49 +0100)]
fixed history in ReductionControl::check() for final iteration

6 years agomove ProcessGrid into a stand-alone header under Utilities::MPI namespace
Denis Davydov [Wed, 29 Nov 2017 11:03:05 +0000 (12:03 +0100)]
move ProcessGrid into a stand-alone header under Utilities::MPI namespace

6 years agofurther improvements
Denis Davydov [Mon, 27 Nov 2017 06:40:25 +0000 (07:40 +0100)]
further improvements

6 years agoMerge pull request #5548 from bangerth/grammar
Martin Kronbichler [Wed, 29 Nov 2017 11:02:14 +0000 (12:02 +0100)]
Merge pull request #5548 from bangerth/grammar

Grammar update.

6 years agoMerge pull request #5545 from bangerth/move-tests
Martin Kronbichler [Wed, 29 Nov 2017 11:01:46 +0000 (12:01 +0100)]
Merge pull request #5545 from bangerth/move-tests

Move tests.

6 years agoMerge pull request #5549 from BenBrands/collect_periodic_faces
Martin Kronbichler [Wed, 29 Nov 2017 11:00:49 +0000 (12:00 +0100)]
Merge pull request #5549 from BenBrands/collect_periodic_faces

small fix of a template parameter in function orthogonal_equality

6 years agoGrammar update. 5548/head
Wolfgang Bangerth [Wed, 29 Nov 2017 01:39:39 +0000 (18:39 -0700)]
Grammar update.

6 years agoMake partition_zoltan the default choice for p::s::Triangulation
Daniel Arndt [Tue, 28 Nov 2017 20:38:24 +0000 (21:38 +0100)]
Make partition_zoltan the default choice for p::s::Triangulation

6 years agoAlso move a necessary header file. 5545/head
Wolfgang Bangerth [Tue, 28 Nov 2017 20:41:17 +0000 (13:41 -0700)]
Also move a necessary header file.

6 years agovarious cleanups and fixes to ScaLAPACK wrappers
Denis Davydov [Mon, 20 Nov 2017 10:58:28 +0000 (11:58 +0100)]
various cleanups and fixes to ScaLAPACK wrappers

6 years agoadd a quick test
Denis Davydov [Wed, 22 Nov 2017 22:46:35 +0000 (23:46 +0100)]
add a quick test

6 years agofind ScaLAPACK with cmake, document the new interface, add changelog
Denis Davydov [Mon, 20 Nov 2017 09:11:56 +0000 (10:11 +0100)]
find ScaLAPACK with cmake, document the new interface, add changelog

6 years agoAdded routine and tests to compute all eigenpairs of s.p.d matrices
Benjamin Brands [Mon, 20 Nov 2017 07:39:51 +0000 (08:39 +0100)]
Added routine and tests to compute all eigenpairs of s.p.d matrices

6 years agoseperated Blacs context into separate class ProcessGrid
Benjamin Brands [Thu, 16 Nov 2017 12:26:00 +0000 (13:26 +0100)]
seperated Blacs context into separate class ProcessGrid

6 years agoadded routine to compute all eigenvalues for symmetric matrices
Benjamin Brands [Wed, 15 Nov 2017 08:52:47 +0000 (09:52 +0100)]
added routine to compute all eigenvalues for symmetric matrices

6 years agoadd scaling results
Denis Davydov [Sat, 16 Sep 2017 15:02:44 +0000 (17:02 +0200)]
add scaling results

6 years agoadd ScaLAPACK wrappers for dense parallel linear algebra
Denis Davydov [Wed, 6 Sep 2017 12:33:29 +0000 (14:33 +0200)]
add ScaLAPACK wrappers for dense parallel linear algebra

6 years agoMerge pull request #5543 from masterleinad/fix_unsigned_warning
Bruno Turcksin [Tue, 28 Nov 2017 19:36:05 +0000 (14:36 -0500)]
Merge pull request #5543 from masterleinad/fix_unsigned_warning

Fix warning regarding unsigned int comparison

6 years agoMove pattern tests into parameter_handler/.
Wolfgang Bangerth [Tue, 28 Nov 2017 18:10:33 +0000 (11:10 -0700)]
Move pattern tests into parameter_handler/.

6 years agoMove tensor tests into their own directory.
Wolfgang Bangerth [Tue, 28 Nov 2017 18:09:16 +0000 (11:09 -0700)]
Move tensor tests into their own directory.

6 years agoCreate a directory for tensors.
Wolfgang Bangerth [Tue, 28 Nov 2017 18:07:18 +0000 (11:07 -0700)]
Create a directory for tensors.

6 years agoAdd a CMakeLists.txt file.
Wolfgang Bangerth [Tue, 28 Nov 2017 18:04:31 +0000 (11:04 -0700)]
Add a CMakeLists.txt file.

6 years agoMove DataOut tests from numerics/ to a new directory data_out/.
Wolfgang Bangerth [Tue, 28 Nov 2017 18:03:21 +0000 (11:03 -0700)]
Move DataOut tests from numerics/ to a new directory data_out/.

6 years agoMove DataOutBase tests from base/ to a new directory data_out/.
Wolfgang Bangerth [Tue, 28 Nov 2017 18:02:41 +0000 (11:02 -0700)]
Move DataOutBase tests from base/ to a new directory data_out/.

6 years agoMerge pull request #5542 from GivAlz/new_serialize_cellid
Wolfgang Bangerth [Tue, 28 Nov 2017 17:36:46 +0000 (10:36 -0700)]
Merge pull request #5542 from GivAlz/new_serialize_cellid

Adding serialize for CellId

6 years agoMinor cleanups.
Wolfgang Bangerth [Tue, 28 Nov 2017 17:35:19 +0000 (10:35 -0700)]
Minor cleanups.

6 years agosmall fix of template parameter in function orthogonal_equality 5549/head
Benjamin Brands [Tue, 28 Nov 2017 17:32:56 +0000 (18:32 +0100)]
small fix of template parameter in function orthogonal_equality

6 years agoMerge pull request #4577 from simfeld/fix-hp-face-dg
Wolfgang Bangerth [Tue, 28 Nov 2017 17:32:47 +0000 (10:32 -0700)]
Merge pull request #4577 from simfeld/fix-hp-face-dg

Fix FE_Face elements for use in hp

6 years agoMerge pull request #5478 from masterleinad/array_view_3
Wolfgang Bangerth [Tue, 28 Nov 2017 17:25:33 +0000 (10:25 -0700)]
Merge pull request #5478 from masterleinad/array_view_3

Remove (empty) default constructor for ArrayView

6 years agoMerge pull request #5496 from masterleinad/serialize_hp_dof_handler_test
Wolfgang Bangerth [Tue, 28 Nov 2017 17:24:06 +0000 (10:24 -0700)]
Merge pull request #5496 from masterleinad/serialize_hp_dof_handler_test

Test serialization of hp::DoFHandler

6 years agoMerge pull request #5531 from davydden/fix_parameter_acceptor
Wolfgang Bangerth [Tue, 28 Nov 2017 17:23:24 +0000 (10:23 -0700)]
Merge pull request #5531 from davydden/fix_parameter_acceptor

do not use base/revision.h in parameter_acceptor.h

6 years agoAdding serialize for CellId 5542/head
Giovanni Alzetta [Tue, 28 Nov 2017 16:49:33 +0000 (17:49 +0100)]
Adding serialize for CellId

6 years agoFix warning regarding unsigned int comparison 5543/head
Daniel Arndt [Tue, 28 Nov 2017 14:42:17 +0000 (15:42 +0100)]
Fix warning regarding unsigned int comparison

6 years agoMerge pull request #5541 from bangerth/grammar
Timo Heister [Tue, 28 Nov 2017 03:12:23 +0000 (22:12 -0500)]
Merge pull request #5541 from bangerth/grammar

More grammar fixes.

6 years agoMore grammar fixes. 5541/head
Wolfgang Bangerth [Mon, 27 Nov 2017 23:04:49 +0000 (16:04 -0700)]
More grammar fixes.

6 years agoMerge pull request #5538 from tjhei/trilinos_compress_check
Daniel Arndt [Mon, 27 Nov 2017 22:57:46 +0000 (23:57 +0100)]
Merge pull request #5538 from tjhei/trilinos_compress_check

check Trilinos compress() argument

6 years agoMerge pull request #5475 from bangerth/cuthill-mckk
Daniel Arndt [Mon, 27 Nov 2017 22:44:13 +0000 (23:44 +0100)]
Merge pull request #5475 from bangerth/cuthill-mckk

Generalize the numbering in the Cuthill-McKee algorithm.

6 years agoMerge pull request #5540 from bangerth/grammar
Timo Heister [Mon, 27 Nov 2017 20:38:29 +0000 (15:38 -0500)]
Merge pull request #5540 from bangerth/grammar

Change grammar of function documentation.

6 years agoChange grammar of function documentation. 5540/head
Wolfgang Bangerth [Mon, 27 Nov 2017 20:11:02 +0000 (13:11 -0700)]
Change grammar of function documentation.

6 years agoAdd another test. 5475/head
Wolfgang Bangerth [Thu, 16 Nov 2017 16:36:18 +0000 (09:36 -0700)]
Add another test.

6 years agoAdd changelog entry.
Wolfgang Bangerth [Thu, 16 Nov 2017 15:58:21 +0000 (08:58 -0700)]
Add changelog entry.

6 years agoAdd a test.
Wolfgang Bangerth [Thu, 16 Nov 2017 15:50:50 +0000 (08:50 -0700)]
Add a test.

6 years agoGeneralize the numbering in the Cuthill-McKee algorithm.
Wolfgang Bangerth [Thu, 9 Nov 2017 00:24:00 +0000 (17:24 -0700)]
Generalize the numbering in the Cuthill-McKee algorithm.

6 years agocheck Trilinos compress() argument 5538/head
Timo Heister [Mon, 27 Nov 2017 17:04:38 +0000 (12:04 -0500)]
check Trilinos compress() argument

6 years agoMerge pull request #5512 from GivAlz/Failing_find_active
Daniel Arndt [Mon, 27 Nov 2017 16:41:57 +0000 (17:41 +0100)]
Merge pull request #5512 from GivAlz/Failing_find_active

Fix: solving issues of find active cell around point(cache) with points at the edge

6 years agoMerge pull request #5537 from masterleinad/fix_wsign
Wolfgang Bangerth [Mon, 27 Nov 2017 13:29:27 +0000 (06:29 -0700)]
Merge pull request #5537 from masterleinad/fix_wsign

Fix Wsign-compare warning

6 years agoFix Wsign-compare warning 5537/head
Daniel Arndt [Mon, 27 Nov 2017 11:40:26 +0000 (12:40 +0100)]
Fix Wsign-compare warning

6 years agoMerge pull request #5535 from bangerth/grammar-issues
Martin Kronbichler [Mon, 27 Nov 2017 10:53:36 +0000 (11:53 +0100)]
Merge pull request #5535 from bangerth/grammar-issues

Use uniform grammar in function documentation.

6 years agoUse uniform grammar in function documentation. 5535/head
Wolfgang Bangerth [Mon, 27 Nov 2017 04:50:45 +0000 (21:50 -0700)]
Use uniform grammar in function documentation.

6 years agoTell users to build with ZOLTAN. 5533/head
Wolfgang Bangerth [Sun, 26 Nov 2017 23:22:00 +0000 (16:22 -0700)]
Tell users to build with ZOLTAN.

6 years agoMerge pull request #5514 from niveshd/zoltanPartition
Wolfgang Bangerth [Sun, 26 Nov 2017 23:19:33 +0000 (16:19 -0700)]
Merge pull request #5514 from niveshd/zoltanPartition

Mesh partitioning with zoltan instead of metis.

6 years agoMerge pull request #5528 from tamiko/generalized_interpolation_5
Wolfgang Bangerth [Sun, 26 Nov 2017 22:34:14 +0000 (15:34 -0700)]
Merge pull request #5528 from tamiko/generalized_interpolation_5

Allow non-interpolatory elements in FESystem for generalized supp.p.

6 years agoMerge pull request #5532 from masterleinad/fix_empty_lines
Wolfgang Bangerth [Sun, 26 Nov 2017 22:31:13 +0000 (15:31 -0700)]
Merge pull request #5532 from masterleinad/fix_empty_lines

Fix empty lines in subdomain_ids_parallel_08 output

6 years agoFix empty lines in subdomain_ids_parallel_08 output 5532/head
Daniel Arndt [Sun, 26 Nov 2017 22:16:43 +0000 (23:16 +0100)]
Fix empty lines in subdomain_ids_parallel_08 output

6 years agodo not use base/revision.h in parameter_acceptor.h 5531/head
Denis Davydov [Sun, 26 Nov 2017 18:13:02 +0000 (19:13 +0100)]
do not use base/revision.h in parameter_acceptor.h

6 years agoadd changelog entry 5514/head
Nivesh Dommaraju [Sun, 26 Nov 2017 17:49:16 +0000 (11:49 -0600)]
add changelog entry

6 years agoadd zoltan tests
Nivesh Dommaraju [Sun, 26 Nov 2017 17:49:02 +0000 (11:49 -0600)]
add zoltan tests

6 years agoAdd support for Zoltan graph partitioner
Nivesh Dommaraju [Sun, 26 Nov 2017 17:47:53 +0000 (11:47 -0600)]
Add support for Zoltan graph partitioner

Zoltan is used for graph partitioning. The following page for zoltan's
guide has more information.
http://www.cs.sandia.gov/zoltan/ug_html/ug_alg_phg.html

Implementation:
 - 4 query functions, as need by zoltan, are added in sparsity_tools.cc
 - additional option has been added to "partition_triangulation"
   function to choose between "metis" or "zoltan"

6 years agoCMake: Add check for Zoltan to trilinos configuration
Nivesh Dommaraju [Sun, 26 Nov 2017 17:45:11 +0000 (11:45 -0600)]
CMake: Add check for Zoltan to trilinos configuration

6 years agoupdate documentation 5528/head
Matthias Maier [Sat, 25 Nov 2017 18:39:21 +0000 (12:39 -0600)]
update documentation

6 years agoupdate test output
Matthias Maier [Fri, 24 Nov 2017 17:36:59 +0000 (11:36 -0600)]
update test output

6 years agoadd a new assert checking for non-interpolatory base elements
Matthias Maier [Fri, 24 Nov 2017 17:27:47 +0000 (11:27 -0600)]
add a new assert checking for non-interpolatory base elements

6 years agoremove duplicate asserts
Matthias Maier [Fri, 24 Nov 2017 16:41:23 +0000 (10:41 -0600)]
remove duplicate asserts

6 years agoBugfix: Allow non-interpolatory elements in FESystem for generalized s.p.
Matthias Maier [Fri, 24 Nov 2017 16:26:07 +0000 (10:26 -0600)]
Bugfix: Allow non-interpolatory elements in FESystem for generalized s.p.

In case we encounter a non-interpolatory base element we now simply fill
the corresponding degrees of freedom with NaNs.

6 years agoAdded tolerance and test for GridTools::find_active_cell_around_point and test 5512/head
Giovanni Alzetta [Tue, 21 Nov 2017 14:56:57 +0000 (15:56 +0100)]
Added tolerance and test for GridTools::find_active_cell_around_point and test

6 years agoMerge pull request #5526 from GivAlz/new_bbox_serialization
Wolfgang Bangerth [Sat, 25 Nov 2017 04:57:04 +0000 (21:57 -0700)]
Merge pull request #5526 from GivAlz/new_bbox_serialization

Adding serialize function to boundingbox class

6 years agoAdding serialize function to boundingbox class and test 5526/head
Giovanni Alzetta [Fri, 24 Nov 2017 11:27:14 +0000 (12:27 +0100)]
Adding serialize function to boundingbox class and test


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