]> https://gitweb.dealii.org/ - dealii.git/log
dealii.git
6 years agobug fix applyBinary function in Rol::VectorAdaptor 5702/head
vishalkenchan [Fri, 5 Jan 2018 13:40:06 +0000 (14:40 +0100)]
bug fix applyBinary function in Rol::VectorAdaptor

6 years agoMerge pull request #5462 from masterleinad/fix_test_project_03 5264/head
Denis Davydov [Tue, 14 Nov 2017 14:54:51 +0000 (15:54 +0100)]
Merge pull request #5462 from masterleinad/fix_test_project_03

Fix numerics/project_03

6 years agoMerge pull request #5459 from masterleinad/use_c++14_deprecated
Timo Heister [Tue, 14 Nov 2017 14:48:46 +0000 (09:48 -0500)]
Merge pull request #5459 from masterleinad/use_c++14_deprecated

Use c++14's [[deprecated]] if possible

6 years agoMerge pull request #5443 from davydden/vtu_binary
Wolfgang Bangerth [Tue, 14 Nov 2017 13:37:24 +0000 (06:37 -0700)]
Merge pull request #5443 from davydden/vtu_binary

filter XML binary output in some tests

6 years agoFix numerics/project_03 5462/head
Daniel Arndt [Tue, 14 Nov 2017 13:04:10 +0000 (14:04 +0100)]
Fix numerics/project_03

6 years agoMerge pull request #5461 from jppelteret/fix_5455
Jean-Paul Pelteret [Tue, 14 Nov 2017 08:32:38 +0000 (09:32 +0100)]
Merge pull request #5461 from jppelteret/fix_5455

Add header to tests using Sacado::Rad.

6 years agoUse [[deprecated]] if available 5459/head
Daniel Arndt [Mon, 13 Nov 2017 22:40:06 +0000 (23:40 +0100)]
Use [[deprecated]] if available

6 years agoAdd header to tests using Sacado::Rad. 5461/head
Jean-Paul Pelteret [Tue, 14 Nov 2017 06:35:45 +0000 (07:35 +0100)]
Add header to tests using Sacado::Rad.

For some older versions of Trilinos, the header for templated
Sacado::Rad numbers is missing from Sacado.hpp.

6 years agoMerge pull request #5385 from tjhei/prm_escape_latex
Wolfgang Bangerth [Tue, 14 Nov 2017 05:11:40 +0000 (22:11 -0700)]
Merge pull request #5385 from tjhei/prm_escape_latex

 escape characters in LaTeX format of ParameterHandler

6 years agoFix position of DEAL_II_DEPRECATED
Daniel Arndt [Mon, 13 Nov 2017 21:39:27 +0000 (22:39 +0100)]
Fix position of DEAL_II_DEPRECATED

6 years agofilter out binary data from XML output for some data_out tests 5443/head
Denis Davydov [Sun, 12 Nov 2017 19:47:02 +0000 (20:47 +0100)]
filter out binary data from XML output for some data_out tests

6 years agoMerge pull request #5452 from masterleinad/merge_grid_tools
Wolfgang Bangerth [Mon, 13 Nov 2017 17:13:31 +0000 (10:13 -0700)]
Merge pull request #5452 from masterleinad/merge_grid_tools

Merge parallel::GridTools into GridTools

6 years agocleanup a few data_out_base_vtu tests
Denis Davydov [Sun, 12 Nov 2017 19:20:05 +0000 (20:20 +0100)]
cleanup a few data_out_base_vtu tests

6 years agoUpdate changelog entries 5452/head
Daniel Arndt [Mon, 13 Nov 2017 14:56:33 +0000 (15:56 +0100)]
Update changelog entries

6 years agoReintroduce distributed/grid_tools.h for a deprecation warning
Daniel Arndt [Mon, 13 Nov 2017 14:51:39 +0000 (15:51 +0100)]
Reintroduce distributed/grid_tools.h for a deprecation warning

6 years agoMerge pull request #5447 from masterleinad/deprecate_vector_view
Wolfgang Bangerth [Mon, 13 Nov 2017 14:38:45 +0000 (07:38 -0700)]
Merge pull request #5447 from masterleinad/deprecate_vector_view

Deprecate VectorView

6 years agoMerge pull request #5453 from tjhei/petsc_lu_doc
Wolfgang Bangerth [Mon, 13 Nov 2017 14:35:26 +0000 (07:35 -0700)]
Merge pull request #5453 from tjhei/petsc_lu_doc

update documentation for PETSc PreconditionLU

6 years agoupdate documentation for PETSc PreconditionLU 5453/head
Timo Heister [Mon, 13 Nov 2017 14:05:16 +0000 (09:05 -0500)]
update documentation for PETSc PreconditionLU

6 years agoMerge distributed/grid_tools into grid/grid_tools
Daniel Arndt [Mon, 13 Nov 2017 11:37:24 +0000 (12:37 +0100)]
Merge distributed/grid_tools into grid/grid_tools

6 years agoRemove 'parallel' prefix in distributed/grid_tools
Daniel Arndt [Sun, 12 Nov 2017 20:35:40 +0000 (21:35 +0100)]
Remove 'parallel' prefix in distributed/grid_tools

6 years agoMerge pull request #5448 from bangerth/add-instantiation
Martin Kronbichler [Mon, 13 Nov 2017 13:33:35 +0000 (14:33 +0100)]
Merge pull request #5448 from bangerth/add-instantiation

Add a missing instantiation.

6 years agoMerge pull request #5444 from masterleinad/fix_interface_matrix_entry
Daniel Arndt [Mon, 13 Nov 2017 00:42:42 +0000 (01:42 +0100)]
Merge pull request #5444 from masterleinad/fix_interface_matrix_entry

Fix missing include file in multigrid/interface_matrix_entry_01

6 years agoMove deprecation declaration at the end 5447/head
Daniel Arndt [Sun, 12 Nov 2017 23:59:58 +0000 (00:59 +0100)]
Move deprecation declaration at the end

6 years agoAdd a test. 5448/head
Wolfgang Bangerth [Sun, 12 Nov 2017 23:30:29 +0000 (16:30 -0700)]
Add a test.

6 years agoAdd changelog entry.
Wolfgang Bangerth [Sun, 12 Nov 2017 23:13:41 +0000 (16:13 -0700)]
Add changelog entry.

6 years agoAdd missing instantiation of function.
Wolfgang Bangerth [Sun, 12 Nov 2017 23:13:34 +0000 (16:13 -0700)]
Add missing instantiation of function.

6 years agoDeprecate VectorView
Daniel Arndt [Sun, 12 Nov 2017 21:09:31 +0000 (22:09 +0100)]
Deprecate VectorView

6 years agoMerge pull request #5445 from drwells/update-gdbinit
Wolfgang Bangerth [Sun, 12 Nov 2017 21:11:19 +0000 (14:11 -0700)]
Merge pull request #5445 from drwells/update-gdbinit

Update the GDB pretty-printer.

6 years agoMerge pull request #5446 from drwells/convert-to-utf8
Wolfgang Bangerth [Sun, 12 Nov 2017 21:10:48 +0000 (14:10 -0700)]
Merge pull request #5446 from drwells/convert-to-utf8

Prefer UTF-8 to latin-1.

6 years agoPrefer UTF-8 to latin-1. 5446/head
David Wells [Sun, 12 Nov 2017 20:56:13 +0000 (15:56 -0500)]
Prefer UTF-8 to latin-1.

6 years agoUpdate the GDB pretty-printer. 5445/head
David Wells [Sun, 12 Nov 2017 20:52:15 +0000 (15:52 -0500)]
Update the GDB pretty-printer.

The data array variable was renamed from 'val' to 'values' in 2faae204c26.

6 years agoFix missing include filed in multigrid/interface_matrix_entry_01 5444/head
Daniel Arndt [Sun, 12 Nov 2017 20:35:40 +0000 (21:35 +0100)]
Fix missing include filed in multigrid/interface_matrix_entry_01

6 years agoMerge pull request #5442 from davydden/fix_illegal_character
David Wells [Sun, 12 Nov 2017 19:33:57 +0000 (14:33 -0500)]
Merge pull request #5442 from davydden/fix_illegal_character

fix illegal character (<F6> instead of oe)

6 years agofix illegal character (<F6> instead of oe) 5442/head
Denis Davydov [Sun, 12 Nov 2017 19:26:45 +0000 (20:26 +0100)]
fix illegal character (<F6> instead of oe)

6 years agoMerge pull request #5439 from kronbichler/extend_trilinos_direct_solver
Jean-Paul Pelteret [Fri, 10 Nov 2017 21:02:53 +0000 (22:02 +0100)]
Merge pull request #5439 from kronbichler/extend_trilinos_direct_solver

 Let Trilinos direct solver use given factorization with LA::distributed::Vector

6 years agomove to namespace 5385/head
Timo Heister [Fri, 10 Nov 2017 19:23:16 +0000 (14:23 -0500)]
move to namespace

6 years agoMerge pull request #5434 from tjhei/test_dos_2_unix
Timo Heister [Fri, 10 Nov 2017 18:03:17 +0000 (13:03 -0500)]
Merge pull request #5434 from tjhei/test_dos_2_unix

fix dos formatted files in contrib/utilities/indent

6 years agoMerge pull request #5380 from vishalkenchan/rol/vector_adaptor
Jean-Paul Pelteret [Fri, 10 Nov 2017 15:46:45 +0000 (16:46 +0100)]
Merge pull request #5380 from vishalkenchan/rol/vector_adaptor

Using Trilinos/ROL library

6 years agoAdd test. 5439/head
Martin Kronbichler [Fri, 10 Nov 2017 14:33:31 +0000 (15:33 +0100)]
Add test.

6 years agoChangelog
Martin Kronbichler [Fri, 10 Nov 2017 13:52:33 +0000 (14:52 +0100)]
Changelog

6 years agoEnable Trilinos direct solvers with LA::distributed::Vector.
Martin Kronbichler [Fri, 10 Nov 2017 13:50:09 +0000 (14:50 +0100)]
Enable Trilinos direct solvers with LA::distributed::Vector.

6 years agoadded rol tests 5380/head
vishalkenchan [Fri, 10 Nov 2017 09:15:36 +0000 (10:15 +0100)]
added rol tests

6 years agoadd a vector adaptor to use Trilinos/ROL library; added cmake variable DEAL_II_TRILIN...
vishalkenchan [Fri, 10 Nov 2017 09:15:12 +0000 (10:15 +0100)]
add a vector adaptor to use Trilinos/ROL library; added cmake variable DEAL_II_TRILINOS_WITH_ROL

6 years agofix dos formatted files in contrib/utilities/indent 5434/head
Timo Heister [Thu, 9 Nov 2017 18:58:51 +0000 (13:58 -0500)]
fix dos formatted files in contrib/utilities/indent

6 years agoMerge pull request #5408 from kronbichler/speedup_spherical_manifold
Martin Kronbichler [Thu, 9 Nov 2017 20:19:07 +0000 (21:19 +0100)]
Merge pull request #5408 from kronbichler/speedup_spherical_manifold

Speed up SphericalManifold::get_new_point

6 years agoMerge pull request #5433 from bangerth/fix-inst.in
Timo Heister [Thu, 9 Nov 2017 18:27:19 +0000 (13:27 -0500)]
Merge pull request #5433 from bangerth/fix-inst.in

Rename class groups in template-arguments.in.

6 years agoMerge pull request #5430 from bangerth/new-tests
Denis Davydov [Thu, 9 Nov 2017 17:30:45 +0000 (18:30 +0100)]
Merge pull request #5430 from bangerth/new-tests

Add tests for VectorTools::integrate_difference() using complex data types.

6 years agoRename class groups in template-arguments.in. 5433/head
Wolfgang Bangerth [Thu, 9 Nov 2017 15:08:54 +0000 (08:08 -0700)]
Rename class groups in template-arguments.in.

The previous name no longer adequately represented what these classes were. Fix this.

6 years agoMerge pull request #5428 from bangerth/set-perms
Timo Heister [Thu, 9 Nov 2017 16:06:42 +0000 (11:06 -0500)]
Merge pull request #5428 from bangerth/set-perms

Set file permissions in the indentation script.

6 years agoMerge pull request #5431 from bangerth/add-changelog
Denis Davydov [Thu, 9 Nov 2017 15:06:22 +0000 (16:06 +0100)]
Merge pull request #5431 from bangerth/add-changelog

Add a changelog entry for complex-valued vectors.

6 years agoAdd a changelog entry for complex-valued vectors. 5431/head
Wolfgang Bangerth [Thu, 9 Nov 2017 15:00:24 +0000 (08:00 -0700)]
Add a changelog entry for complex-valued vectors.

6 years agoAdd tests for VectorTools::integrate_difference() using complex data types. 5430/head
Wolfgang Bangerth [Thu, 9 Nov 2017 14:52:31 +0000 (07:52 -0700)]
Add tests for VectorTools::integrate_difference() using complex data types.

6 years agoMinor adjustments to one test.
Wolfgang Bangerth [Thu, 9 Nov 2017 14:52:03 +0000 (07:52 -0700)]
Minor adjustments to one test.

6 years agoMerge pull request #5419 from bangerth/more-complex
Martin Kronbichler [Thu, 9 Nov 2017 08:17:33 +0000 (09:17 +0100)]
Merge pull request #5419 from bangerth/more-complex

Allow outputting complex-valued data through DataOut.

6 years agoMerge pull request #5429 from bangerth/instantiations
Jean-Paul Pelteret [Thu, 9 Nov 2017 05:36:45 +0000 (06:36 +0100)]
Merge pull request #5429 from bangerth/instantiations

Instantiate some more functions for the codim-1 case.

6 years agoInstantiate some more functions for the codim-1 case. 5429/head
Wolfgang Bangerth [Thu, 9 Nov 2017 00:22:10 +0000 (17:22 -0700)]
Instantiate some more functions for the codim-1 case.

While there, also simplify the file slightly.

6 years agoSet file permissions in the indentation script. 5428/head
Wolfgang Bangerth [Wed, 8 Nov 2017 20:15:18 +0000 (13:15 -0700)]
Set file permissions in the indentation script.

6 years agoAdd more tests that check both real and complex-valued output at the same time. 5419/head
Wolfgang Bangerth [Wed, 8 Nov 2017 19:56:36 +0000 (12:56 -0700)]
Add more tests that check both real and complex-valued output at the same time.

6 years agoSimplify code a bit.
Wolfgang Bangerth [Wed, 8 Nov 2017 19:52:26 +0000 (12:52 -0700)]
Simplify code a bit.

6 years agoMerge pull request #5423 from drwells/fix-unity-build
Jean-Paul Pelteret [Wed, 8 Nov 2017 19:37:22 +0000 (20:37 +0100)]
Merge pull request #5423 from drwells/fix-unity-build

Disambiguate parallel::GridTools and GridTools.

6 years agoMerge pull request #5424 from bangerth/fix-test
Matthias Maier [Wed, 8 Nov 2017 17:46:01 +0000 (11:46 -0600)]
Merge pull request #5424 from bangerth/fix-test

Fix test.

6 years agoMerge pull request #5425 from bangerth/fix-line-endings
Matthias Maier [Wed, 8 Nov 2017 17:45:42 +0000 (11:45 -0600)]
Merge pull request #5425 from bangerth/fix-line-endings

Consistently use UNIX line endings.

6 years agoConsistently use UNIX line endings. 5425/head
Wolfgang Bangerth [Wed, 8 Nov 2017 17:42:04 +0000 (10:42 -0700)]
Consistently use UNIX line endings.

6 years agoConvert DOS to Unix line endings. 5424/head
Wolfgang Bangerth [Wed, 8 Nov 2017 17:31:47 +0000 (10:31 -0700)]
Convert DOS to Unix line endings.

6 years agoFix test output.
Wolfgang Bangerth [Wed, 8 Nov 2017 17:29:06 +0000 (10:29 -0700)]
Fix test output.

6 years agoMerge pull request #5391 from jppelteret/ad-product_types
Matthias Maier [Wed, 8 Nov 2017 17:27:55 +0000 (11:27 -0600)]
Merge pull request #5391 from jppelteret/ad-product_types

Implement more product types for AD numbers

6 years agoMerge pull request #5422 from tjhei/doxygen_deprecated
Wolfgang Bangerth [Wed, 8 Nov 2017 16:45:52 +0000 (09:45 -0700)]
Merge pull request #5422 from tjhei/doxygen_deprecated

doxygen: fix deprecated function signatures

6 years agoInclude Adol-C product types header in fe_values 5391/head
Jean-Paul Pelteret [Wed, 8 Nov 2017 16:36:08 +0000 (17:36 +0100)]
Include Adol-C product types header in fe_values

Fixes #5420

6 years agoDisambiguate parallel::GridTools and GridTools. 5423/head
David Wells [Wed, 8 Nov 2017 16:30:56 +0000 (11:30 -0500)]
Disambiguate parallel::GridTools and GridTools.

6 years agoImplement ProductType for Adol-C numbers
Jean-Paul Pelteret [Fri, 3 Nov 2017 18:56:53 +0000 (19:56 +0100)]
Implement ProductType for Adol-C numbers

6 years agoAdd support and implement ProductType for Trilinos Sacado::Rad numbers
Jean-Paul Pelteret [Fri, 3 Nov 2017 18:56:01 +0000 (19:56 +0100)]
Add support and implement ProductType for Trilinos Sacado::Rad numbers

6 years agoMerge pull request #5421 from jppelteret/fix_5420
Jean-Paul Pelteret [Wed, 8 Nov 2017 15:30:03 +0000 (16:30 +0100)]
Merge pull request #5421 from jppelteret/fix_5420

Fix expansion for Adol-C numbers

6 years agodoxygen: fix deprecatedfunction signatures 5422/head
Timo Heister [Wed, 8 Nov 2017 14:49:44 +0000 (09:49 -0500)]
doxygen: fix deprecatedfunction signatures

Deprecated functions show up with a trailing "1". Fix this.

Example: has_generalized_face_support_points() in http://www.dealii.org/developer/doxygen/deal.II/classFiniteElement.html

6 years agobreak
Timo Heister [Wed, 8 Nov 2017 14:31:16 +0000 (09:31 -0500)]
break

6 years agoupdate
Timo Heister [Wed, 8 Nov 2017 14:22:44 +0000 (09:22 -0500)]
update

6 years agoFix expansion for Adol-C numbers 5421/head
Jean-Paul Pelteret [Wed, 8 Nov 2017 13:40:40 +0000 (14:40 +0100)]
Fix expansion for Adol-C numbers

6 years agoMerge pull request #5358 from GivAlz/new_distribute_bboxes
Bruno Turcksin [Wed, 8 Nov 2017 13:21:50 +0000 (08:21 -0500)]
Merge pull request #5358 from GivAlz/new_distribute_bboxes

New function parallel::GridTools::exchange_local_bounding_boxes

6 years agoAdded function parallel::GridTools::exchange_local_bounding_boxes and tests 5358/head
Giovanni Alzetta [Fri, 27 Oct 2017 12:45:10 +0000 (12:45 +0000)]
Added function parallel::GridTools::exchange_local_bounding_boxes and tests

6 years agoMerge pull request #5406 from tcclevenger/interface_matrix_entry
Martin Kronbichler [Wed, 8 Nov 2017 09:17:03 +0000 (10:17 +0100)]
Merge pull request #5406 from tcclevenger/interface_matrix_entry

Add functionality to create sparsity pattern for MG interface matrices

6 years agoAdd a test for the cell-data case.
Wolfgang Bangerth [Wed, 8 Nov 2017 04:18:05 +0000 (21:18 -0700)]
Add a test for the cell-data case.

6 years agoOutput complex-valued data for cell data.
Wolfgang Bangerth [Wed, 8 Nov 2017 04:17:03 +0000 (21:17 -0700)]
Output complex-valued data for cell data.

6 years agoAdd another test for a vector element.
Wolfgang Bangerth [Wed, 8 Nov 2017 04:03:06 +0000 (21:03 -0700)]
Add another test for a vector element.

6 years agoAdd a test for a vector element.
Wolfgang Bangerth [Wed, 8 Nov 2017 04:00:47 +0000 (21:00 -0700)]
Add a test for a vector element.

6 years agoAdd a test for a scalar element.
Wolfgang Bangerth [Wed, 8 Nov 2017 03:56:59 +0000 (20:56 -0700)]
Add a test for a scalar element.

6 years agoOutput both real and imaginary parts of the solution.
Wolfgang Bangerth [Wed, 8 Nov 2017 03:56:39 +0000 (20:56 -0700)]
Output both real and imaginary parts of the solution.

6 years agoDeal better with complex-valued vectors.
Wolfgang Bangerth [Wed, 8 Nov 2017 00:55:49 +0000 (17:55 -0700)]
Deal better with complex-valued vectors.

Specifically, add a safety check, and correctly count real/imaginary part as two.

6 years agoMerge pull request #5382 from jppelteret/ad-build_template_arguments
Bruno Turcksin [Wed, 8 Nov 2017 01:36:01 +0000 (20:36 -0500)]
Merge pull request #5382 from jppelteret/ad-build_template_arguments

Update build system template arguments for AD number types.

6 years agoMerge pull request #5418 from bangerth/cleanups
Bruno Turcksin [Wed, 8 Nov 2017 01:24:56 +0000 (20:24 -0500)]
Merge pull request #5418 from bangerth/cleanups

Minor updates to DoFRenumbering::Cuthill_McKee.

6 years agoRevert an if-else and other restructuring. 5418/head
Wolfgang Bangerth [Tue, 7 Nov 2017 22:51:55 +0000 (15:51 -0700)]
Revert an if-else and other restructuring.

6 years agoSome comment updates and minor restructuring.
Wolfgang Bangerth [Tue, 7 Nov 2017 22:42:21 +0000 (15:42 -0700)]
Some comment updates and minor restructuring.

6 years agoMerge pull request #5412 from agrayver/subdomain-wise-fix
Wolfgang Bangerth [Tue, 7 Nov 2017 18:53:09 +0000 (11:53 -0700)]
Merge pull request #5412 from agrayver/subdomain-wise-fix

Fix erroneous assert and add a test

6 years agoMerge pull request #5393 from gassmoeller/fix_manifold_normal_vector
Wolfgang Bangerth [Tue, 7 Nov 2017 18:14:42 +0000 (11:14 -0700)]
Merge pull request #5393 from gassmoeller/fix_manifold_normal_vector

Fix algorithm in Manifold::normal_vector

6 years agoFix erroneous assert 5412/head
Alexander Grayver [Mon, 6 Nov 2017 16:00:46 +0000 (17:00 +0100)]
Fix erroneous assert

6 years agoTest third algorithm 5393/head
Rene Gassmoeller [Mon, 6 Nov 2017 21:23:03 +0000 (14:23 -0700)]
Test third algorithm

6 years agocopyright year
Timo Heister [Tue, 7 Nov 2017 15:29:01 +0000 (10:29 -0500)]
copyright year

6 years agoprovide alternative labels to be backwards compatible
Timo Heister [Tue, 7 Nov 2017 15:28:24 +0000 (10:28 -0500)]
provide alternative labels to be backwards compatible

6 years agoMerge pull request #5416 from davydden/tests/full_mmatrix_10_mkl
Denis Davydov [Tue, 7 Nov 2017 13:13:12 +0000 (14:13 +0100)]
Merge pull request #5416 from davydden/tests/full_mmatrix_10_mkl

lower the tolerance for full_matrix_10 test with float numbers

6 years agoMerge pull request #5415 from kronbichler/replace_fabs_by_abs
Denis Davydov [Tue, 7 Nov 2017 10:34:25 +0000 (11:34 +0100)]
Merge pull request #5415 from kronbichler/replace_fabs_by_abs

Replace std::fabs() by std::abs() for complex numbers.

6 years agolower the tolerance for full_matrix_10 test with float numbers 5416/head
Denis Davydov [Tue, 7 Nov 2017 09:27:31 +0000 (10:27 +0100)]
lower the tolerance for full_matrix_10 test with float numbers

6 years agoReplace std::fabs() by std::abs() for complex numbers. 5415/head
Martin Kronbichler [Tue, 7 Nov 2017 09:03:45 +0000 (10:03 +0100)]
Replace std::fabs() by std::abs() for complex numbers.


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