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https://gitweb.dealii.org/ - dealii.git/log
vishalkenchan [Wed, 10 Jan 2018 11:09:35 +0000 (12:09 +0100)]
updating copy-right headers
vishalkenchan [Wed, 10 Jan 2018 10:42:45 +0000 (11:42 +0100)]
suppress PHG warning saying: PHG_EDGE_SIZE_THRESHOLD is low
Daniel Arndt [Mon, 8 Jan 2018 23:24:39 +0000 (00:24 +0100)]
Merge pull request #5708 from davydden/bugfix/fix_zoltan
fix Zoltan debug output
Denis Davydov [Mon, 8 Jan 2018 21:25:17 +0000 (22:25 +0100)]
fix Zoltan debug output
Timo Heister [Mon, 8 Jan 2018 17:55:24 +0000 (12:55 -0500)]
Merge pull request #5696 from bangerth/fix-hierarchical-2
Fix hierarchical renumbering
Luca Heltai [Mon, 8 Jan 2018 12:00:48 +0000 (13:00 +0100)]
Merge pull request #5695 from masterleinad/dummy_cylindrical_manifold
Dummy implementation for CylindricalManifold for spacedim!=3
Wolfgang Bangerth [Mon, 8 Jan 2018 08:54:34 +0000 (02:54 -0600)]
Merge pull request #5655 from Jie-Cheng/petsc_mmult
Add PETScWrappers::MatrixBase::mmult
Wolfgang Bangerth [Thu, 4 Jan 2018 15:41:26 +0000 (08:41 -0700)]
Update documentation.
Wolfgang Bangerth [Sun, 31 Dec 2017 23:36:07 +0000 (16:36 -0700)]
Add a changelog entry.
Wolfgang Bangerth [Sun, 31 Dec 2017 23:33:21 +0000 (16:33 -0700)]
Add a test.
Wolfgang Bangerth [Sun, 31 Dec 2017 23:33:15 +0000 (16:33 -0700)]
Ensure that DoFRenumbering::hierarchical() is independent of the previous DoF indices.
Wolfgang Bangerth [Mon, 8 Jan 2018 08:09:01 +0000 (02:09 -0600)]
Merge pull request #5705 from marcfehling/step-26_positivity_preservation
Extended step-26 documentation with regard to positivity preservation.
Wolfgang Bangerth [Mon, 8 Jan 2018 08:08:06 +0000 (01:08 -0700)]
Minor edits to the positivity-preserving section of step-25
Wolfgang Bangerth [Mon, 8 Jan 2018 00:08:33 +0000 (18:08 -0600)]
Merge pull request #5706 from masterleinad/update_bits_cone_03
Update output of bits/cone_03
Daniel Arndt [Tue, 2 Jan 2018 23:38:34 +0000 (00:38 +0100)]
Dummy implementation for CylindricalManifold for spacedim!=3
Daniel Arndt [Sun, 7 Jan 2018 11:48:07 +0000 (12:48 +0100)]
Update output of bits/cone_03
Marc Fehling [Sun, 7 Jan 2018 01:37:07 +0000 (02:37 +0100)]
Extended step-26 documentation with regard to positivity preservation.
Luca Heltai [Sat, 6 Jan 2018 21:19:56 +0000 (22:19 +0100)]
Merge pull request #5682 from masterleinad/replace_cylinder_boundary
Replace CylinderBoundary by CylindricalManifold in tests
Luca Heltai [Sat, 6 Jan 2018 21:19:24 +0000 (22:19 +0100)]
Merge pull request #5703 from masterleinad/replace_hypershell
Replace HyperShellBoundary by SphericalManifold in tests
Luca Heltai [Sat, 6 Jan 2018 21:19:06 +0000 (22:19 +0100)]
Merge pull request #5698 from masterleinad/rebase_opencascade_boundaries
Rebase Opencascade Boundary classes
Luca Heltai [Sat, 6 Jan 2018 21:18:45 +0000 (22:18 +0100)]
Merge pull request #5697 from masterleinad/replace_cone_boundary
Replace ConeBoundary by CylindricalManifold
Daniel Arndt [Sat, 6 Jan 2018 00:00:29 +0000 (01:00 +0100)]
Merge pull request #5700 from Rombur/cuda_assert
Make AssertCuda use Assert instead of AssertThrow
Denis Davydov [Fri, 5 Jan 2018 20:59:47 +0000 (21:59 +0100)]
Merge pull request #5702 from vishalkenchan/bug_fix/rol_vector_adaptor
ROL: bug fix applyBinary function in Rol::VectorAdaptor
Wolfgang Bangerth [Fri, 5 Jan 2018 18:33:57 +0000 (12:33 -0600)]
Merge pull request #5701 from masterleinad/fix_tests_5691
Fix failing tests after #5691
Matthias Maier [Fri, 5 Jan 2018 17:54:57 +0000 (11:54 -0600)]
Merge pull request #5699 from Rombur/pedantic
Do not use pedantic when cuda support is enabled
Daniel Arndt [Fri, 5 Jan 2018 14:08:11 +0000 (15:08 +0100)]
Use SphericalManifold in mpi/p4est_2d_constraintmatrix_03
Daniel Arndt [Fri, 5 Jan 2018 16:02:40 +0000 (17:02 +0100)]
Simplify mpi/p4est_2d_constraintmatrix_03
Bruno Turcksin [Fri, 5 Jan 2018 16:45:04 +0000 (11:45 -0500)]
Do not use pedantic when cuda support is enabled
nvcc generates code that produces a lot of warnings when pedantic is used.
Since the code is generated by nvcc there is nothing we can do about it except
not using pedantic.
Daniel Arndt [Fri, 5 Jan 2018 16:02:51 +0000 (17:02 +0100)]
Replace HyperShellBoundary by SphericalManifold in tests
Daniel Arndt [Fri, 5 Jan 2018 13:58:29 +0000 (14:58 +0100)]
Merge pull request #5684 from masterleinad/replace_boundary
Replace StraightBoundary by FlatManifold in tests
vishalkenchan [Fri, 5 Jan 2018 13:40:06 +0000 (14:40 +0100)]
bug fix applyBinary function in Rol::VectorAdaptor
Daniel Arndt [Thu, 4 Jan 2018 23:38:48 +0000 (00:38 +0100)]
Changelog entry
Daniel Arndt [Fri, 5 Jan 2018 11:43:55 +0000 (12:43 +0100)]
Fix failing tests after #5691
Daniel Arndt [Thu, 4 Jan 2018 17:07:09 +0000 (18:07 +0100)]
Simplify computation of normal vector in 2D
Daniel Arndt [Tue, 2 Jan 2018 18:56:56 +0000 (19:56 +0100)]
Replace StraightBoundary by FlatManifold in tests
Daniel Arndt [Tue, 2 Jan 2018 18:56:32 +0000 (19:56 +0100)]
Move implementation of normal_vector and get_normal_at_vertices from StraightBoundary to FlatManifold
Bruno Turcksin [Fri, 5 Jan 2018 02:23:44 +0000 (21:23 -0500)]
Make AssertCuda use Assert instead of AssertThrow
We used AssertThrow instead of Assert in AssertCuda because of a bug that has
now been fixed.
Jie Cheng [Wed, 20 Dec 2017 20:47:56 +0000 (15:47 -0500)]
Add PETScWrappers::MatrixBase::mmult
Daniel Arndt [Thu, 4 Jan 2018 23:12:31 +0000 (00:12 +0100)]
Rebase Opencascade Boundary classes onto FlatManifold
Daniel Arndt [Thu, 4 Jan 2018 16:20:52 +0000 (17:20 +0100)]
Changelog entry
Daniel Arndt [Thu, 4 Jan 2018 16:17:40 +0000 (17:17 +0100)]
Update documentation
Daniel Arndt [Thu, 4 Jan 2018 16:09:45 +0000 (17:09 +0100)]
Replace ConeBoundary by CylindricalManifold in tests
Daniel Arndt [Thu, 4 Jan 2018 16:08:21 +0000 (17:08 +0100)]
Implement CylindricalManifold::push_forward_gradient
Daniel Arndt [Thu, 4 Jan 2018 16:01:41 +0000 (17:01 +0100)]
Simplify CylindricalManifold::push_forward
Wolfgang Bangerth [Sun, 31 Dec 2017 22:24:59 +0000 (15:24 -0700)]
Add comment.
Daniel Arndt [Thu, 4 Jan 2018 14:38:52 +0000 (15:38 +0100)]
Merge pull request #5694 from bangerth/glossary
Write something about the Z order in the glossary.
Wolfgang Bangerth [Tue, 2 Jan 2018 22:54:47 +0000 (15:54 -0700)]
Write something about the Z order in the glossary.
Wolfgang Bangerth [Thu, 4 Jan 2018 13:51:47 +0000 (07:51 -0600)]
Merge pull request #5691 from gassmoeller/write_float_vtu
Write data and vertices as floats
Rene Gassmoeller [Thu, 4 Jan 2018 13:38:14 +0000 (14:38 +0100)]
Add changelog
Rene Gassmoeller [Wed, 3 Jan 2018 18:15:03 +0000 (19:15 +0100)]
Update test results
Rene Gassmoeller [Tue, 26 Dec 2017 21:33:47 +0000 (15:33 -0600)]
Write data and vertices as floats
Timo Heister [Wed, 3 Jan 2018 10:00:26 +0000 (05:00 -0500)]
Merge pull request #5689 from bangerth/fix
Use the correct iterator type in DoFRenumbering::hierarchical().
David Wells [Wed, 3 Jan 2018 05:33:11 +0000 (00:33 -0500)]
Merge pull request #5692 from masterleinad/avoid_compiler_warning
Avoid compiler warning regarding writing past the end of an array
David Wells [Wed, 3 Jan 2018 05:31:15 +0000 (00:31 -0500)]
Merge pull request #5693 from masterleinad/fix_typo_grid_out
Fix typo in GridOutFlags::Vtu
Daniel Arndt [Tue, 2 Jan 2018 14:10:47 +0000 (15:10 +0100)]
Fix typo
Daniel Arndt [Tue, 2 Jan 2018 18:49:58 +0000 (19:49 +0100)]
Avoid compiler warning regarding writing
beyond the end of an array
Wolfgang Bangerth [Sun, 31 Dec 2017 22:31:18 +0000 (15:31 -0700)]
Use the correct iterator type in DoFRenumbering::hierarchical().
Timo Heister [Mon, 1 Jan 2018 09:28:43 +0000 (04:28 -0500)]
Merge pull request #5685 from bangerth/fix-hierarchical
Clean up some odds and ends.
Timo Heister [Mon, 1 Jan 2018 09:26:56 +0000 (04:26 -0500)]
Merge pull request #5687 from bangerth/doc-update
Update a couple of comments for p::s::Triangulation.
Timo Heister [Mon, 1 Jan 2018 09:26:10 +0000 (04:26 -0500)]
Merge pull request #5688 from bangerth/micro-fix
Make an input argument to a function 'const'.
Wolfgang Bangerth [Sun, 31 Dec 2017 22:27:47 +0000 (15:27 -0700)]
Make an input argument to a function 'const'.
Wolfgang Bangerth [Sun, 31 Dec 2017 22:25:20 +0000 (15:25 -0700)]
Update a couple of comments.
Wolfgang Bangerth [Sat, 30 Dec 2017 21:22:36 +0000 (14:22 -0700)]
Rename a variable for clarity.
Wolfgang Bangerth [Sat, 30 Dec 2017 18:19:36 +0000 (11:19 -0700)]
Clean up some odds and ends.
Daniel Arndt [Fri, 29 Dec 2017 15:17:49 +0000 (16:17 +0100)]
Replace CylinderManifold by CylindricalManifold in tests
Martin Kronbichler [Fri, 29 Dec 2017 14:13:08 +0000 (15:13 +0100)]
Merge pull request #5680 from bangerth/add-tests
Add a couple of tests for TrilinosWrappers::SparseMatrix::n_nonzero_entries().
Luca Heltai [Fri, 29 Dec 2017 11:25:45 +0000 (12:25 +0100)]
Merge pull request #5611 from juan42/add_idas_detection
Add check if sundials has idas
David Wells [Thu, 28 Dec 2017 21:36:32 +0000 (16:36 -0500)]
Merge pull request #5668 from eldarkh/fix-hdiv-seminorm
Fix the way H-div seminorm is computed
Wolfgang Bangerth [Thu, 28 Dec 2017 19:56:39 +0000 (12:56 -0700)]
Add a couple of tests for TrilinosWrappers::SparseMatrix::n_nonzero_entries().
Daniel Arndt [Thu, 28 Dec 2017 18:00:19 +0000 (19:00 +0100)]
Merge pull request #5679 from masterleinad/improve_fix_tests
Add GMSH quicktest
Eldar Khattatov [Thu, 28 Dec 2017 17:37:42 +0000 (12:37 -0500)]
Fix Hdiv seminorm
Denis Davydov [Thu, 28 Dec 2017 16:46:57 +0000 (17:46 +0100)]
Merge pull request #5678 from masterleinad/improve_fix_tests_2
Fix BOOST/ZLIB quicktest
Daniel Arndt [Thu, 28 Dec 2017 14:20:58 +0000 (15:20 +0100)]
Add GMSH quicktest
Daniel Arndt [Thu, 28 Dec 2017 14:19:59 +0000 (15:19 +0100)]
Fix BOOST/ZLIB quicktest
Wolfgang Bangerth [Thu, 28 Dec 2017 14:38:27 +0000 (08:38 -0600)]
Merge pull request #5676 from kronbichler/vectorized_array_streaming_stores
Streaming store operation for VectorizedArray
Daniel Arndt [Thu, 28 Dec 2017 08:27:47 +0000 (09:27 +0100)]
Merge pull request #5677 from davydden/test/zlib_boost_quick_test
tests: add a quick test for Zlib with Boost
Martin Kronbichler [Wed, 27 Dec 2017 15:16:21 +0000 (16:16 +0100)]
Add changelog.
Martin Kronbichler [Wed, 27 Dec 2017 15:16:09 +0000 (16:16 +0100)]
New test.
Martin Kronbichler [Wed, 27 Dec 2017 15:16:00 +0000 (16:16 +0100)]
Add VectorizedArray::streaming_store.
Denis Davydov [Wed, 27 Dec 2017 18:19:35 +0000 (19:19 +0100)]
tests: add a quick test for Zlib with Boost
Martin Kronbichler [Wed, 27 Dec 2017 14:52:29 +0000 (15:52 +0100)]
Merge pull request #5670 from ExtremOPS/updateSparseMatrixMMULT
Update sparse matrix mmult with DynamicSparsityPattern::compute_mmult_pattern(..)
Denis Davydov [Mon, 25 Dec 2017 07:48:37 +0000 (08:48 +0100)]
Merge pull request #5674 from bangerth/doc-update-2
Update the documentation of some PETScWrappers::MatrixBase member variables
Wolfgang Bangerth [Sat, 23 Dec 2017 16:20:52 +0000 (09:20 -0700)]
Update the documentation of some PETScWrappers::MatrixBase member variables.
Denis Davydov [Sun, 24 Dec 2017 17:57:43 +0000 (18:57 +0100)]
Merge pull request #5671 from bangerth/doc-update
Move deleted operators out of the private: section of a class.
Wolfgang Bangerth [Sun, 24 Dec 2017 16:09:42 +0000 (10:09 -0600)]
Merge pull request #5673 from masterleinad/fix_intel_warnings
Fix Intel 18 warnings in OpenCASCADE wrapper
Wolfgang Bangerth [Sat, 23 Dec 2017 16:16:44 +0000 (09:16 -0700)]
Move deleted operators out of the private: section of a class.
There is no longer a reason to hide these operators. They aren't usable anyway, so we
may as well document this publicly.
Daniel Arndt [Sat, 23 Dec 2017 17:24:19 +0000 (18:24 +0100)]
Fix Intel 18 warnings in OpenCASCADE wrapper
Christoph Goering [Fri, 22 Dec 2017 22:02:17 +0000 (23:02 +0100)]
added change log
Christoph Goering [Fri, 22 Dec 2017 22:01:27 +0000 (23:01 +0100)]
improved readability inside SparseMatrix::mmult(..) with DynamicSparsityPattern::compute_mmult_pattern(..)
Daniel Arndt [Sat, 23 Dec 2017 23:05:00 +0000 (00:05 +0100)]
Merge pull request #5604 from masterleinad/extract_hanging_node_parallel
Make DoFTools::extract_hanging_node_dofs for p::d/s::Triangualations
Luca Heltai [Sat, 23 Dec 2017 18:51:08 +0000 (19:51 +0100)]
Merge pull request #5669 from davydden/arclength_boundary_02
disable unstable arclength_boundary_02 test
Denis Davydov [Sat, 23 Dec 2017 18:49:18 +0000 (19:49 +0100)]
Merge pull request #5672 from masterleinad/update_project_to_object_01
Update test output for grid/project_to_object_01
Daniel Arndt [Sat, 23 Dec 2017 17:16:25 +0000 (18:16 +0100)]
Merge pull request #5665 from tjhei/trilinos_sparsity_copy_from
implement missing TrilinosWrappers::SparsityPattern::copy_from()
Daniel Arndt [Sat, 23 Dec 2017 16:42:52 +0000 (17:42 +0100)]
Update test output for grid/project_to_object_01
Daniel Arndt [Thu, 21 Dec 2017 17:27:59 +0000 (18:27 +0100)]
Simplify the logic used and extract all locally relevant DoFs
Denis Davydov [Fri, 22 Dec 2017 20:11:43 +0000 (21:11 +0100)]
disable unstable arclength_boundary_02 test
Martin Kronbichler [Sat, 23 Dec 2017 15:38:53 +0000 (16:38 +0100)]
Merge pull request #5562 from gassmoeller/optimize_spherical_manifold_get_new_point
Optimize spherical manifold get_new_point into get_new_points
Timo Heister [Fri, 22 Dec 2017 14:14:09 +0000 (09:14 -0500)]
implement missing TrilinosWrappers::SparsityPattern::copy_from()
also test the different copy_from implementations.
Denis Davydov [Fri, 22 Dec 2017 03:13:19 +0000 (04:13 +0100)]
Merge pull request #5656 from davydden/feature/blas64
support 64bit BLAS
Denis Davydov [Thu, 21 Dec 2017 23:05:29 +0000 (00:05 +0100)]
Merge pull request #5663 from bangerth/grammar
Fix the grammar of a few doc strings.
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