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https://gitweb.dealii.org/ - dealii.git/log
Martin Kronbichler [Wed, 25 Apr 2018 08:57:36 +0000 (10:57 +0200)]
Fix warning about missing return statement in ICC.
Martin Kronbichler [Wed, 25 Apr 2018 07:02:02 +0000 (09:02 +0200)]
Merge pull request #6285 from kkormann/issue_5667_fe_eval_template
Introduce face functionality to fe_evaluation.
Denis Davydov [Wed, 25 Apr 2018 04:58:12 +0000 (06:58 +0200)]
Merge pull request #6323 from bangerth/typo
Fix a grammar mistake.
Wolfgang Bangerth [Wed, 25 Apr 2018 03:54:29 +0000 (21:54 -0600)]
Merge pull request #6322 from masterleinad/fix_petsc_instantiation
Instantiate distribute_local_to_global for another combination of PETScWrapper objects
Wolfgang Bangerth [Wed, 25 Apr 2018 03:36:07 +0000 (21:36 -0600)]
Fix a grammar mistake.
Wolfgang Bangerth [Tue, 24 Apr 2018 23:37:29 +0000 (17:37 -0600)]
Merge pull request #6305 from masterleinad/object_fe_collection_dh
Store the FECollection object and not just the pointer in DoFHandler and hp::DoFHandler
Daniel Arndt [Tue, 24 Apr 2018 22:33:13 +0000 (00:33 +0200)]
Instantiate distribute_local_to_global for another combination of PETScWrapper objects
Denis Davydov [Tue, 24 Apr 2018 20:44:24 +0000 (22:44 +0200)]
Merge pull request #6320 from tjhei/doxygen_fixes2
more doxygen fixes
Timo Heister [Tue, 24 Apr 2018 20:41:23 +0000 (16:41 -0400)]
more doxygen fixes
Denis Davydov [Tue, 24 Apr 2018 20:32:48 +0000 (22:32 +0200)]
Merge pull request #6319 from tjhei/doxygen_fixes
doxygen fixes
Timo Heister [Tue, 24 Apr 2018 20:27:50 +0000 (16:27 -0400)]
doxygen fixes
warnings/errors that appear during doxygen generation
Katharina Kormann [Fri, 20 Apr 2018 19:15:43 +0000 (21:15 +0200)]
Introduce face functionality to fe_evaluation.
Distinguish cell and face type by new template argument.
Matthias Maier [Tue, 24 Apr 2018 19:57:02 +0000 (14:57 -0500)]
Merge pull request #6318 from tjhei/doxygen_formatting2
fix some ugly doxygen formatting
Timo Heister [Tue, 24 Apr 2018 19:49:37 +0000 (15:49 -0400)]
fix some ugly doxygen formatting
Matthias Maier [Tue, 24 Apr 2018 18:40:53 +0000 (13:40 -0500)]
Merge pull request #6315 from masterleinad/less_iterations_complex_solver
Allow less iterations in petsc_complex/solver_real_02
Matthias Maier [Tue, 24 Apr 2018 18:19:17 +0000 (13:19 -0500)]
Merge pull request #6316 from tjhei/doxygen_formatting
Doxygen formatting
Denis Davydov [Tue, 24 Apr 2018 18:03:39 +0000 (20:03 +0200)]
Merge pull request #6317 from tjhei/doxygen_add_rol
enable ROL in doxygen
Timo Heister [Tue, 24 Apr 2018 17:45:03 +0000 (13:45 -0400)]
enable ROL in doxygen
otherwise rol namespace will not be in the documentation
Timo Heister [Tue, 24 Apr 2018 17:43:34 +0000 (13:43 -0400)]
put @ref on separate lines
Timo Heister [Tue, 24 Apr 2018 17:42:37 +0000 (13:42 -0400)]
fix doxygen group sections
Daniel Arndt [Tue, 24 Apr 2018 15:58:18 +0000 (17:58 +0200)]
Allow less iterations in petsc_complex/solver_real_02
Daniel Arndt [Tue, 24 Apr 2018 15:53:16 +0000 (17:53 +0200)]
Remove parameter names for defaulted member functions
Matthias Maier [Tue, 24 Apr 2018 14:26:57 +0000 (09:26 -0500)]
Merge pull request #6313 from masterleinad/capitalize_gmsh
Capitalize Gmsh appropriately
Daniel Arndt [Tue, 24 Apr 2018 14:19:36 +0000 (16:19 +0200)]
Capitalize Gmsh appropriately
Bruno Turcksin [Tue, 24 Apr 2018 12:09:02 +0000 (08:09 -0400)]
Merge pull request #6309 from masterleinad/fix_cuda
Fix failing CUDA test
Daniel Arndt [Tue, 24 Apr 2018 00:30:40 +0000 (02:30 +0200)]
Add assertion for nonempty hp::FECollection
Daniel Arndt [Tue, 24 Apr 2018 09:59:16 +0000 (11:59 +0200)]
Fix failing CUDA test
Martin Kronbichler [Tue, 24 Apr 2018 09:04:37 +0000 (11:04 +0200)]
Merge pull request #6295 from luca-heltai/minmax-diameter-with-mapping
Min/Max diameter with mapping
Denis Davydov [Tue, 24 Apr 2018 06:48:36 +0000 (08:48 +0200)]
Merge pull request #6302 from tamiko/fix_a_test_16
Tests: metis/metis_05 add output variant
Denis Davydov [Tue, 24 Apr 2018 04:59:57 +0000 (06:59 +0200)]
Merge pull request #6308 from tamiko/cmake_würgaround
CMake: Ensure to be compatible with version 3.11 FindBlas.cmake
Matthias Maier [Tue, 24 Apr 2018 04:17:47 +0000 (23:17 -0500)]
CMake: Ensure to be compatible with version 3.11 FindBlas.cmake
We have to work around some upstream changes [1] that break our project
configuration. Let's simply filter out the "PkgConfig::PKGC_BLAS" string
and hope for the best.
[1] https://gitlab.kitware.com/cmake/cmake/issues/17934
Daniel Arndt [Mon, 23 Apr 2018 23:32:38 +0000 (01:32 +0200)]
Store the FECollection object and not just the pointer in DoFHandler and hp::DoFHandler
Matthias Maier [Mon, 23 Apr 2018 22:21:06 +0000 (17:21 -0500)]
Merge pull request #6299 from tjhei/msvc_support
blacklist MSVC 2015 or older
Matthias Maier [Mon, 23 Apr 2018 22:18:18 +0000 (17:18 -0500)]
Tests: metis/metis_05 add output variant
Denis Davydov [Mon, 23 Apr 2018 21:59:48 +0000 (23:59 +0200)]
Merge pull request #6301 from bangerth/update-changelog
Minor updates to changelog entries.
Wolfgang Bangerth [Mon, 23 Apr 2018 21:57:04 +0000 (15:57 -0600)]
Minor updates to changelog entries.
Timo Heister [Mon, 23 Apr 2018 21:54:29 +0000 (17:54 -0400)]
Merge pull request #6284 from tamiko/fix_cornercase
Tests: Always create a small 'detailed.log' file
Luca Heltai [Mon, 23 Apr 2018 18:01:54 +0000 (20:01 +0200)]
Fixed issues by TH and WB.
Wolfgang Bangerth [Mon, 23 Apr 2018 20:08:00 +0000 (14:08 -0600)]
Merge pull request #6298 from tamiko/petsc_390
PETSc: Port to version 3.9.0
Timo Heister [Mon, 23 Apr 2018 17:45:08 +0000 (13:45 -0400)]
blacklist MSVC 2015 or older
because we can no longer support it
Matthias Maier [Mon, 23 Apr 2018 18:13:31 +0000 (13:13 -0500)]
Doc: Update latest known version to 3.9.0
David Wells [Mon, 23 Apr 2018 17:50:56 +0000 (13:50 -0400)]
Merge pull request #6287 from drwells/update-gridgenerator-examples-1
Update basic Manifold usage in the examples.
David Wells [Sun, 22 Apr 2018 21:12:08 +0000 (17:12 -0400)]
Update basic Manifold usage in the examples.
Wolfgang Bangerth [Mon, 23 Apr 2018 16:50:38 +0000 (10:50 -0600)]
Merge pull request #6281 from masterleinad/hp_dh
Store a copy of the FECollection object in hp::DoFHandler
Matthias Maier [Mon, 23 Apr 2018 16:36:47 +0000 (11:36 -0500)]
add a changes entry
Matthias Maier [Mon, 23 Apr 2018 16:34:12 +0000 (11:34 -0500)]
PETSc: Port to version 3.9.0
In version 3.9.0 *SolverPackage was renamed to *SolverType. Guard the
two instances where we call such functions.
Wolfgang Bangerth [Mon, 23 Apr 2018 16:05:30 +0000 (10:05 -0600)]
Merge pull request #6293 from tjhei/harden_deprecated_check
harden cmake deprecation check
Luca Heltai [Mon, 23 Apr 2018 15:33:26 +0000 (17:33 +0200)]
Changelog.
Luca Heltai [Mon, 23 Apr 2018 15:28:41 +0000 (17:28 +0200)]
Added test.
Luca Heltai [Mon, 23 Apr 2018 15:01:54 +0000 (17:01 +0200)]
Added optional mapping to minimal/maximal grid diameter.
Timo Heister [Mon, 23 Apr 2018 14:56:31 +0000 (10:56 -0400)]
harden cmake deprecation check
It turns out MSVC 2015 passes the CXX14 check for the deprecated
attribute, but then complains when it is used in a constructor:
E:\jenkins\workspace\workspace\dealii-windows-
compile\CC\msvc2015\label\win\include\deal.II/base/table_indices.h(129):
error C2416: attribute 'deprecated' cannot be applied in this context
Fix this.
Denis Davydov [Mon, 23 Apr 2018 07:09:46 +0000 (09:09 +0200)]
Merge pull request #6289 from BenBrands/rm_scalapack_15_b
Remove failing ScaLAPACK tests
Benjamin Brands [Mon, 23 Apr 2018 06:26:59 +0000 (08:26 +0200)]
Remove failing ScaLAPACK tests
Denis Davydov [Mon, 23 Apr 2018 05:31:03 +0000 (07:31 +0200)]
Merge pull request #6288 from masterleinad/householder_base
Don't derive Householder from FullMatrix
Daniel Arndt [Sun, 22 Apr 2018 23:30:00 +0000 (01:30 +0200)]
Don't derive Householder from FullMatrix
Daniel Arndt [Sun, 22 Apr 2018 22:51:59 +0000 (00:51 +0200)]
Merge pull request #6286 from masterleinad/fix_msvc_comparison
Fix MSVC warning regarding comparison of signed and unsigned numbers
Daniel Arndt [Sun, 22 Apr 2018 20:20:09 +0000 (22:20 +0200)]
Merge pull request #6185 from drwells/remove-more-Boundary-references
Remove more boundary references
Daniel Arndt [Sun, 22 Apr 2018 20:04:05 +0000 (22:04 +0200)]
Fix MSVC warning regarding comparison of signed and unsigned numbers
Matthias Maier [Sun, 22 Apr 2018 17:18:28 +0000 (12:18 -0500)]
Tests: Always create a small 'detailed.log' file
This ensures that scripts like `run_testsuite.cmake` always have the
correct compiler versions at hand.
Daniel Arndt [Sun, 22 Apr 2018 05:16:45 +0000 (07:16 +0200)]
Merge pull request #5990 from tjhei/step-37-print-vec-info
step-37: print vectorization info
Daniel Arndt [Sat, 21 Apr 2018 22:30:41 +0000 (00:30 +0200)]
Merge pull request #6282 from bangerth/more-2
Use a std::map instead of a std::list of std::pair.
Daniel Arndt [Sat, 21 Apr 2018 06:49:32 +0000 (08:49 +0200)]
Changelog entry
Daniel Arndt [Wed, 18 Apr 2018 19:56:35 +0000 (21:56 +0200)]
Store a copy of the FECollection object in hp::DoFHandler
Denis Davydov [Sat, 21 Apr 2018 19:41:22 +0000 (21:41 +0200)]
Merge pull request #6283 from bangerth/doc-update
Avoid using 'info' as a word.
Wolfgang Bangerth [Sat, 21 Apr 2018 19:12:36 +0000 (13:12 -0600)]
Avoid using 'info' as a word.
Use 'information' instead, or if it refers to a variable then at least mark it up.
Wolfgang Bangerth [Sat, 21 Apr 2018 18:58:43 +0000 (12:58 -0600)]
Merge pull request #6272 from tjhei/document_example_dof_points
add doc for write_gnuplot_dof_support_point_info
Timo Heister [Thu, 19 Apr 2018 19:20:31 +0000 (15:20 -0400)]
add doc for write_gnuplot_dof_support_point_info
the code is complicated enough that an example is useful
Timo Heister [Sat, 21 Apr 2018 18:13:11 +0000 (14:13 -0400)]
changelog
Timo Heister [Fri, 2 Mar 2018 21:29:29 +0000 (16:29 -0500)]
step-37: print vectorization info
Wolfgang Bangerth [Sat, 21 Apr 2018 14:35:18 +0000 (08:35 -0600)]
Use a std::map instead of a std::list of std::pair.
The only relevant change is that where previously, when we unpacked one
data set in p::d::Triangulation::notify_ready_to_unpack(), we just dropped
*one* data set but not necessarily the one that had been detached. Now we
actually drop the *correct* one by searching for the key and dropping
that element of the map.
Timo Heister [Sat, 21 Apr 2018 17:39:35 +0000 (13:39 -0400)]
Merge pull request #6280 from bangerth/more
Group all variables in p::d::Tria for data attachment into one structure.
Martin Kronbichler [Sat, 21 Apr 2018 13:18:58 +0000 (15:18 +0200)]
Merge pull request #6210 from kkormann/issue_5667_face_info
Face initialization for matrix-free DG.
Daniel Arndt [Sat, 21 Apr 2018 07:55:54 +0000 (09:55 +0200)]
Merge pull request #6269 from Rombur/cuda_handle
Encapsulate all the cuda handles in a structure
Daniel Arndt [Sat, 21 Apr 2018 06:41:53 +0000 (08:41 +0200)]
Merge pull request #6278 from tjhei/bump_bundled_boost_msvc_ver
updated bundled boost msvc version
Wolfgang Bangerth [Fri, 20 Apr 2018 23:39:04 +0000 (17:39 -0600)]
Rename some variables and clean up code.
David Wells [Fri, 13 Apr 2018 23:13:05 +0000 (19:13 -0400)]
Update the step-32 results.
Use a lovely coffee color scheme for the new plots to emphasize the
color gradient.
David Wells [Sat, 7 Apr 2018 23:21:14 +0000 (19:21 -0400)]
Fix some examples in the manifold module.
The second to last example was wrong: it set manifold ids on the
interior, but should not have. Otherwise, this commit:
1. uses a consistent initialization order
2. refers to SphericalManifold as 'manifold'
3. uses the relatively new Triangulation::set_all_manifold_ids function
4. explicitly remove the manifolds attached to the Triangulations so
that the effect of each manifold is clear.
to tidy things up.
David Wells [Fri, 6 Apr 2018 15:50:36 +0000 (11:50 -0400)]
Use '%' to avoid some doxygen links to Boundary.
David Wells [Fri, 6 Apr 2018 15:50:12 +0000 (11:50 -0400)]
Explicitly deprecate the Boundary module.
David Wells [Thu, 5 Apr 2018 21:40:43 +0000 (17:40 -0400)]
Remove HyperShellBoundary from step-32.
As of
ff7cc4c8075 this functionality is also in Manifold, so we do not
need to use a Boundary object here.
David Wells [Thu, 5 Apr 2018 21:39:50 +0000 (17:39 -0400)]
Redo some documentation to use manifolds.
We should describe things in terms of the Manifold classes since the
Boundary classes are deprecated.
Wolfgang Bangerth [Fri, 20 Apr 2018 20:17:12 +0000 (14:17 -0600)]
Group all variables in p::d::Tria for data attachment into one structure.
David Wells [Thu, 5 Apr 2018 21:39:06 +0000 (17:39 -0400)]
Avoid tria_boundary_lib.h and tria_boundary.h.
These headers only contain only deprecated declarations.
David Wells [Thu, 5 Apr 2018 21:40:04 +0000 (17:40 -0400)]
Explicitly deprecate get_boundary.
Martin Kronbichler [Mon, 16 Apr 2018 10:00:27 +0000 (12:00 +0200)]
Add internal function for identification of faces.
Martin Kronbichler [Thu, 12 Apr 2018 11:37:27 +0000 (13:37 +0200)]
Add methods to compute the face data in MappingInfo.
Katharina Kormann [Mon, 9 Apr 2018 19:47:36 +0000 (21:47 +0200)]
Face initialization for matrix-free DG.
Denis Davydov [Fri, 20 Apr 2018 19:59:25 +0000 (21:59 +0200)]
Merge pull request #6276 from bangerth/fix-test-2
Fix a test by increasing the precision of output.
Denis Davydov [Fri, 20 Apr 2018 18:30:45 +0000 (20:30 +0200)]
Merge pull request #6275 from bangerth/fix-test
Fix test for GCC 4.8.4 by doing a conversion explicitly.
Denis Davydov [Fri, 20 Apr 2018 18:30:28 +0000 (20:30 +0200)]
Merge pull request #6279 from tjhei/file_permissions
fix a file permission
Timo Heister [Fri, 20 Apr 2018 18:26:44 +0000 (14:26 -0400)]
fix a file permission
Timo Heister [Fri, 20 Apr 2018 18:15:16 +0000 (14:15 -0400)]
updated bundled boost msvc version
Wolfgang Bangerth [Fri, 20 Apr 2018 16:14:25 +0000 (10:14 -0600)]
Fix a test by increasing the precision of output.
The test outputs 6 digits, so if there is a difference in the 7th digit that
leads to different 6-digit-rounding, then that produces a difference that is
exactly at the numdiff threshold and the test fails.
Fix this by outputting 7 digits. The difference between the current output
and the stored output is then at most one half of the numdiff tolerance,
and the test succeeds.
Wolfgang Bangerth [Fri, 20 Apr 2018 16:04:58 +0000 (10:04 -0600)]
Fix test for GCC 4.8.4 by doing a conversion explicitly.
Martin Kronbichler [Fri, 20 Apr 2018 15:12:05 +0000 (17:12 +0200)]
Merge pull request #6233 from luca-heltai/disentangle-manifold-and-boundary
Separate manifold_id from boundary_id
Jean-Paul Pelteret [Fri, 20 Apr 2018 13:55:26 +0000 (15:55 +0200)]
Merge pull request #6273 from bangerth/doc-update
Clarify the documentation of DoFTools::extract_dofs().
Wolfgang Bangerth [Fri, 20 Apr 2018 13:23:55 +0000 (07:23 -0600)]
Clarify the documentation of DoFTools::extract_dofs().
Denis Davydov [Fri, 20 Apr 2018 05:15:58 +0000 (07:15 +0200)]
Merge pull request #6267 from adamqc/hp-dh-default-constructor
Add default constructor for hp::DoFHandler.
Ce Qin [Fri, 20 Apr 2018 02:22:10 +0000 (10:22 +0800)]
Add changelog.
Wolfgang Bangerth [Thu, 19 Apr 2018 22:43:31 +0000 (16:43 -0600)]
Merge pull request #6271 from bangerth/doc-update
Further clarify something about p::d::Triangulation and attached data.
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