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https://gitweb.dealii.org/ - dealii.git/log
Matthias Maier [Fri, 27 Apr 2018 15:29:22 +0000 (10:29 -0500)]
zoltan/tria_zoltan_01: Always run with mpirun annotation to avoid race condition
Closes #5773
Matthias Maier [Fri, 27 Apr 2018 14:48:44 +0000 (09:48 -0500)]
Merge pull request #6300 from kronbichler/issue_5667_dof_info
Face loop functionality in MatrixFree, FEFaceEvaluation class, test cases
Matthias Maier [Fri, 27 Apr 2018 14:36:44 +0000 (09:36 -0500)]
Merge pull request #6330 from masterleinad/fix_dh_fe_collection_problem
Only replace FECollection in *DoFHandler if necessary
Martin Kronbichler [Fri, 27 Apr 2018 14:25:31 +0000 (16:25 +0200)]
Merge pull request #6358 from masterleinad/fix_netcdf
Fix up remaining uses of 'output' in GridIn::read_netcdf
Daniel Arndt [Fri, 27 Apr 2018 13:44:57 +0000 (15:44 +0200)]
Fix up remainign uses of 'output'in GridIn::read_netcdf
Matthias Maier [Fri, 27 Apr 2018 13:26:59 +0000 (08:26 -0500)]
Merge pull request #6178 from luca-heltai/patterns-tools-utility-function
Added to_string and to_value
Martin Kronbichler [Fri, 27 Apr 2018 12:49:36 +0000 (14:49 +0200)]
Write changelog entries.
Bruno Turcksin [Fri, 27 Apr 2018 12:34:54 +0000 (08:34 -0400)]
Merge pull request #6350 from masterleinad/fix_cuda_assert
Allow Asserts for functions running on host
Daniel Arndt [Thu, 26 Apr 2018 21:45:12 +0000 (23:45 +0200)]
Allow Asserts for functions running on host
Luca Heltai [Wed, 25 Apr 2018 13:00:42 +0000 (15:00 +0200)]
Failing test in mapping q eulerian.
Luca Heltai [Wed, 25 Apr 2018 09:32:56 +0000 (11:32 +0200)]
Only replace FECollection in *DoFHandler if necessary
Daniel Arndt [Fri, 27 Apr 2018 09:22:04 +0000 (11:22 +0200)]
Comparison operator for FiniteElement and FECollection
Martin Kronbichler [Fri, 27 Apr 2018 11:42:01 +0000 (13:42 +0200)]
Merge pull request #6346 from tamiko/minor_updates
License header updates
Martin Kronbichler [Fri, 27 Apr 2018 11:37:09 +0000 (13:37 +0200)]
Merge pull request #6344 from masterleinad/fix_cppcheck
Fix issues reported by cppcheck
Martin Kronbichler [Thu, 26 Apr 2018 11:35:01 +0000 (13:35 +0200)]
Use an enum rather than a plain number to index into dof index arrays.
Martin Kronbichler [Wed, 25 Apr 2018 17:46:07 +0000 (19:46 +0200)]
Add 37 test files checking many aspects of FEFaceEvaluation.
Katharina Kormann [Wed, 25 Apr 2018 16:47:34 +0000 (18:47 +0200)]
Introduce the new class FEFaceEvaluation. Speed up vector access for contiguous case.
Martin Kronbichler [Wed, 25 Apr 2018 16:24:21 +0000 (18:24 +0200)]
Fix the setup of face connectivity.
Martin Kronbichler [Thu, 26 Apr 2018 15:57:47 +0000 (17:57 +0200)]
Add tests for multiple components in single DoFHandler.
Martin Kronbichler [Mon, 23 Apr 2018 18:08:19 +0000 (20:08 +0200)]
Introduce face loop functionality in MatrixFree. Rework DoFInfo.
Daniel Arndt [Thu, 26 Apr 2018 22:58:48 +0000 (00:58 +0200)]
Make sure that FE_Nothing can be identified by its name
Martin Kronbichler [Fri, 27 Apr 2018 06:49:22 +0000 (08:49 +0200)]
Merge pull request #6303 from Rombur/cuda_chol
Direct solvers on GPU
Matthias Maier [Thu, 26 Apr 2018 21:15:50 +0000 (16:15 -0500)]
update copyright
Matthias Maier [Thu, 26 Apr 2018 21:04:50 +0000 (16:04 -0500)]
manually fix garbled header
Matthias Maier [Thu, 26 Apr 2018 17:32:02 +0000 (12:32 -0500)]
Update LICENSE file
Good news - ./contrib does not contain any third-party stuff any more
and is exclusively copyrighted by us and licensed under LGPL-2.1 or
later.
Matthias Maier [Thu, 26 Apr 2018 17:21:35 +0000 (12:21 -0500)]
Contrib: Improve update-copyright script
Bruno Turcksin [Mon, 23 Apr 2018 22:41:31 +0000 (18:41 -0400)]
Add changelog entry
Bruno Turcksin [Mon, 23 Apr 2018 22:38:52 +0000 (18:38 -0400)]
Remove unnecessary code
Bruno Turcksin [Mon, 23 Apr 2018 22:38:13 +0000 (18:38 -0400)]
Add test for direct solvers on the device
Bruno Turcksin [Mon, 23 Apr 2018 22:37:33 +0000 (18:37 -0400)]
Add direct solver on the device
Bruno Turcksin [Mon, 23 Apr 2018 22:32:37 +0000 (18:32 -0400)]
Add handles for cuSOLVER and cuSPARSE in Utilities::CUDA::Handle
Bruno Turcksin [Mon, 23 Apr 2018 22:28:49 +0000 (18:28 -0400)]
Add cuSOLVER asserts
Bruno Turcksin [Mon, 23 Apr 2018 22:25:50 +0000 (18:25 -0400)]
Add support for cuSOLVER in build system
Daniel Arndt [Thu, 26 Apr 2018 20:38:06 +0000 (22:38 +0200)]
Address comments
Matthias Maier [Thu, 26 Apr 2018 17:53:21 +0000 (12:53 -0500)]
Merge pull request #6347 from jppelteret/follow_up_to_6335
CMake: Add missing boost headers to AdolC module
Martin Kronbichler [Thu, 26 Apr 2018 17:48:23 +0000 (19:48 +0200)]
Merge pull request #6345 from tamiko/cppcheck
Bugfix: Close #ifdef at the right point
Jean-Paul Pelteret [Thu, 26 Apr 2018 17:45:15 +0000 (19:45 +0200)]
CMake: Add missing boost headers to AdolC module
Jean-Paul Pelteret [Thu, 26 Apr 2018 17:24:42 +0000 (19:24 +0200)]
Merge pull request #6335 from tamiko/fix_adolc_test
CMake: Link in Boost libraries for ADOLc check
Matthias Maier [Thu, 26 Apr 2018 16:59:44 +0000 (11:59 -0500)]
Bugfix: Close #ifdef at the right point
This was found by cppcheck that rightfully complains about the #endif
statement closing at the wrong position.
Luca Heltai [Thu, 26 Apr 2018 15:06:10 +0000 (17:06 +0200)]
Merge pull request #6340 from drwells/update-copyright-notices-2
Update copyright notices 2
Martin Kronbichler [Thu, 26 Apr 2018 15:04:13 +0000 (17:04 +0200)]
Merge pull request #6290 from GivAlz/fix_distributed_cpt_loc
Fixed distributed cpt locations return tuple and added test
Daniel Arndt [Thu, 26 Apr 2018 14:40:47 +0000 (16:40 +0200)]
Fix issues reported by cppcheck
Matthias Maier [Wed, 25 Apr 2018 20:44:52 +0000 (15:44 -0500)]
CMake: simplify check
Matthias Maier [Wed, 25 Apr 2018 20:41:00 +0000 (15:41 -0500)]
CMake: Add boost and adolc compatibility check
Make sure to only ever use an external ADOL-C library (that uses the
Boost pool allocator and is linked against external boost) if deal.II is
also configured with external Boost.
Matthias Maier [Wed, 25 Apr 2018 20:23:17 +0000 (15:23 -0500)]
CMake: Let FindADOLC.cmake check whether adolc uses Boost pool allocator
Let the find module check whether adolc uses the Boost pool allocator.
If yes, add all boost libraries to the link interface.
Matthias Maier [Wed, 25 Apr 2018 18:14:49 +0000 (13:14 -0500)]
CMake: add a safeguard
Matthias Maier [Wed, 25 Apr 2018 18:12:50 +0000 (13:12 -0500)]
CMake: run boost configure before adolc configure
Martin Kronbichler [Thu, 26 Apr 2018 11:45:13 +0000 (13:45 +0200)]
Merge pull request #6341 from masterleinad/fix_subscribe_move
Only run assign_subscriptor in Debug mode
Daniel Arndt [Thu, 26 Apr 2018 08:16:32 +0000 (10:16 +0200)]
Only run assign_subscriptor in Debug mode
Denis Davydov [Thu, 26 Apr 2018 07:51:19 +0000 (09:51 +0200)]
Merge pull request #6337 from drwells/update-gridgenerator-examples-3
Update gridgenerator examples 3
David Wells [Wed, 25 Apr 2018 20:20:39 +0000 (16:20 -0400)]
Update step-15 results.
David Wells [Wed, 25 Apr 2018 20:16:27 +0000 (16:16 -0400)]
Use VTU output in step-15.
David Wells [Thu, 26 Apr 2018 03:17:16 +0000 (23:17 -0400)]
Merge pull request #6333 from masterleinad/fix_subscribe_move
Check own subscriptions when assigning in Subscriptor
David Wells [Thu, 26 Apr 2018 02:12:56 +0000 (22:12 -0400)]
Reformat some copyright headers.
David Wells [Thu, 26 Apr 2018 02:12:32 +0000 (22:12 -0400)]
Reassign copyright from mathlab to deal.II.
Done with the permission of Luca Heltai.
David Wells [Thu, 26 Apr 2018 01:55:28 +0000 (21:55 -0400)]
Merge pull request #6331 from tjhei/update_copyright
update copyright years
Luca Heltai [Wed, 25 Apr 2018 22:17:03 +0000 (00:17 +0200)]
Fixed minor comments.
Bruno Turcksin [Wed, 25 Apr 2018 21:23:32 +0000 (17:23 -0400)]
Merge pull request #6304 from drwells/update-gridgenerator-examples-2
Update gridgenerator examples 2
David Wells [Sun, 22 Apr 2018 23:46:05 +0000 (19:46 -0400)]
Change step-10 to use FE_Nothing.
David Wells [Sun, 22 Apr 2018 23:44:43 +0000 (19:44 -0400)]
Update step-10 for 9.0.
This commit changes the output (which was altered as a result of the new
TFI scheme for placing new vertices) and the manifold handling (which
was altered by the 'attach default manifolds to triangulations' change
in GridGenerator).
Wolfgang Bangerth [Wed, 25 Apr 2018 21:12:44 +0000 (15:12 -0600)]
Merge pull request #6338 from drwells/update-gridgenerator-examples-4
Update GridGenerator examples 4
Bruno Turcksin [Wed, 25 Apr 2018 21:08:41 +0000 (17:08 -0400)]
Merge pull request #6310 from kronbichler/matrix_free_module
Matrix free module
David Wells [Wed, 25 Apr 2018 20:28:45 +0000 (16:28 -0400)]
Update step-11.
There is no graphical output for this step so this is easy.
Martin Kronbichler [Wed, 25 Apr 2018 18:53:23 +0000 (20:53 +0200)]
Merge pull request #6324 from kronbichler/fix_compile_warning
Fix warning about missing return statement in ICC
Daniel Arndt [Wed, 25 Apr 2018 16:51:28 +0000 (18:51 +0200)]
Check own subscriptions when assigning in Subscriptor
Timo Heister [Wed, 25 Apr 2018 14:34:37 +0000 (10:34 -0400)]
update copyright years
Timo Heister [Wed, 25 Apr 2018 14:33:58 +0000 (10:33 -0400)]
Merge pull request #6292 from masterleinad/fix_coverity_issues
Fix various issues reported by coverity
Matthias Maier [Wed, 25 Apr 2018 13:57:19 +0000 (08:57 -0500)]
Merge pull request #6321 from masterleinad/add_codecov_support
Add Codecov support
Martin Kronbichler [Wed, 25 Apr 2018 11:43:27 +0000 (13:43 +0200)]
Merge pull request #6327 from masterleinad/fix_typo_dof_handler
Replace DofHandler by DoFHandler
Daniel Arndt [Wed, 25 Apr 2018 11:12:35 +0000 (13:12 +0200)]
Replace DofHandler by DoFHandler
Daniel Arndt [Wed, 25 Apr 2018 10:11:06 +0000 (12:11 +0200)]
Update documentation
Daniel Arndt [Wed, 25 Apr 2018 09:23:07 +0000 (11:23 +0200)]
Require codecov-bash to be downloaded manually
Martin Kronbichler [Wed, 25 Apr 2018 08:57:36 +0000 (10:57 +0200)]
Fix warning about missing return statement in ICC.
Martin Kronbichler [Tue, 24 Apr 2018 13:24:46 +0000 (15:24 +0200)]
Link main matrix-free objects and data structures to module.
Martin Kronbichler [Tue, 24 Apr 2018 13:24:21 +0000 (15:24 +0200)]
Write doxygen module for MatrixFree with face capabilities.
Martin Kronbichler [Wed, 25 Apr 2018 07:02:02 +0000 (09:02 +0200)]
Merge pull request #6285 from kkormann/issue_5667_fe_eval_template
Introduce face functionality to fe_evaluation.
Denis Davydov [Wed, 25 Apr 2018 04:58:12 +0000 (06:58 +0200)]
Merge pull request #6323 from bangerth/typo
Fix a grammar mistake.
Wolfgang Bangerth [Wed, 25 Apr 2018 03:54:29 +0000 (21:54 -0600)]
Merge pull request #6322 from masterleinad/fix_petsc_instantiation
Instantiate distribute_local_to_global for another combination of PETScWrapper objects
Wolfgang Bangerth [Wed, 25 Apr 2018 03:36:07 +0000 (21:36 -0600)]
Fix a grammar mistake.
Wolfgang Bangerth [Tue, 24 Apr 2018 23:37:29 +0000 (17:37 -0600)]
Merge pull request #6305 from masterleinad/object_fe_collection_dh
Store the FECollection object and not just the pointer in DoFHandler and hp::DoFHandler
Daniel Arndt [Tue, 24 Apr 2018 22:33:13 +0000 (00:33 +0200)]
Instantiate distribute_local_to_global for another combination of PETScWrapper objects
Daniel Arndt [Tue, 24 Apr 2018 14:58:50 +0000 (16:58 +0200)]
Add codecov support
Denis Davydov [Tue, 24 Apr 2018 20:44:24 +0000 (22:44 +0200)]
Merge pull request #6320 from tjhei/doxygen_fixes2
more doxygen fixes
Timo Heister [Tue, 24 Apr 2018 20:41:23 +0000 (16:41 -0400)]
more doxygen fixes
Denis Davydov [Tue, 24 Apr 2018 20:32:48 +0000 (22:32 +0200)]
Merge pull request #6319 from tjhei/doxygen_fixes
doxygen fixes
Timo Heister [Tue, 24 Apr 2018 20:27:50 +0000 (16:27 -0400)]
doxygen fixes
warnings/errors that appear during doxygen generation
Katharina Kormann [Fri, 20 Apr 2018 19:15:43 +0000 (21:15 +0200)]
Introduce face functionality to fe_evaluation.
Distinguish cell and face type by new template argument.
Matthias Maier [Tue, 24 Apr 2018 19:57:02 +0000 (14:57 -0500)]
Merge pull request #6318 from tjhei/doxygen_formatting2
fix some ugly doxygen formatting
Timo Heister [Tue, 24 Apr 2018 19:49:37 +0000 (15:49 -0400)]
fix some ugly doxygen formatting
Matthias Maier [Tue, 24 Apr 2018 18:40:53 +0000 (13:40 -0500)]
Merge pull request #6315 from masterleinad/less_iterations_complex_solver
Allow less iterations in petsc_complex/solver_real_02
Matthias Maier [Tue, 24 Apr 2018 18:19:17 +0000 (13:19 -0500)]
Merge pull request #6316 from tjhei/doxygen_formatting
Doxygen formatting
Denis Davydov [Tue, 24 Apr 2018 18:03:39 +0000 (20:03 +0200)]
Merge pull request #6317 from tjhei/doxygen_add_rol
enable ROL in doxygen
Timo Heister [Tue, 24 Apr 2018 17:45:03 +0000 (13:45 -0400)]
enable ROL in doxygen
otherwise rol namespace will not be in the documentation
Timo Heister [Tue, 24 Apr 2018 17:43:34 +0000 (13:43 -0400)]
put @ref on separate lines
Timo Heister [Tue, 24 Apr 2018 17:42:37 +0000 (13:42 -0400)]
fix doxygen group sections
Daniel Arndt [Tue, 24 Apr 2018 15:58:18 +0000 (17:58 +0200)]
Allow less iterations in petsc_complex/solver_real_02
Daniel Arndt [Tue, 24 Apr 2018 15:53:16 +0000 (17:53 +0200)]
Remove parameter names for defaulted member functions
Matthias Maier [Tue, 24 Apr 2018 14:26:57 +0000 (09:26 -0500)]
Merge pull request #6313 from masterleinad/capitalize_gmsh
Capitalize Gmsh appropriately
Daniel Arndt [Tue, 24 Apr 2018 14:19:36 +0000 (16:19 +0200)]
Capitalize Gmsh appropriately
Bruno Turcksin [Tue, 24 Apr 2018 12:09:02 +0000 (08:09 -0400)]
Merge pull request #6309 from masterleinad/fix_cuda
Fix failing CUDA test
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