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https://gitweb.dealii.org/ - dealii.git/log
Wolfgang Bangerth [Sun, 15 Mar 2015 04:48:07 +0000 (23:48 -0500)]
Add an assertion to GridGenerator::create_union_triangulation().
Wolfgang Bangerth [Thu, 12 Mar 2015 14:53:15 +0000 (09:53 -0500)]
Merge pull request #654 from bangerth/doc-updates-6
Doc updates 6
Wolfgang Bangerth [Wed, 11 Mar 2015 02:20:10 +0000 (21:20 -0500)]
Link to the discussion of the 'goto' in step-26.
Wolfgang Bangerth [Wed, 11 Mar 2015 00:41:18 +0000 (19:41 -0500)]
Document the use and reasoning of goto in step-26.
Matthias Maier [Thu, 12 Mar 2015 10:24:35 +0000 (11:24 +0100)]
Merge pull request #644 from bangerth/explain-operator-or
Explain the use of operator| for the update_* flags.
Martin Kronbichler [Thu, 12 Mar 2015 07:46:47 +0000 (08:46 +0100)]
Merge pull request #658 from bangerth/remove-exceptions-without-arguments-5
Improve what an exception says.
Wolfgang Bangerth [Thu, 12 Mar 2015 01:36:58 +0000 (20:36 -0500)]
Improve what an exception says.
This happens to be a case one of my students ran into today. Again for #610.
Bruno Turcksin [Wed, 11 Mar 2015 21:46:55 +0000 (16:46 -0500)]
Merge pull request #214 from Rombur/muelu
Bruno Turcksin [Mon, 6 Oct 2014 14:31:30 +0000 (09:31 -0500)]
Add MueLu preconditioner using MueLu::MLParameterListInterpreter.
Martin Kronbichler [Wed, 11 Mar 2015 20:12:03 +0000 (21:12 +0100)]
Merge pull request #616 from bangerth/remove-deprecated-functions-14
Remove deprecated functions 14
Wolfgang Bangerth [Wed, 11 Mar 2015 19:17:04 +0000 (14:17 -0500)]
Merge pull request #656 from tcclevenger/fix_wiki_links
Fixed Wiki links in README
tcclevenger [Wed, 11 Mar 2015 18:40:21 +0000 (14:40 -0400)]
Fixed Wiki links in README
Wolfgang Bangerth [Mon, 9 Mar 2015 22:18:18 +0000 (17:18 -0500)]
Reindent.
Wolfgang Bangerth [Mon, 9 Mar 2015 22:17:45 +0000 (17:17 -0500)]
Adjust test output.
Apparently the previous couple of commits also fixed a test that previously
produced output that I cannot explain and that now looks completely reasonable.
Wolfgang Bangerth [Mon, 9 Mar 2015 19:52:19 +0000 (14:52 -0500)]
Follow Martin K's advice on what the argument should be.
Wolfgang Bangerth [Mon, 9 Mar 2015 19:48:33 +0000 (14:48 -0500)]
Document changes in semantics to apply_boundary_values.
Wolfgang Bangerth [Mon, 9 Mar 2015 19:16:03 +0000 (14:16 -0500)]
Document changes to TrilinosWrappers::SparseMatrix::clear_row().
While there, also remove the second, nonsensical call to compress().
Wolfgang Bangerth [Mon, 9 Mar 2015 19:15:11 +0000 (14:15 -0500)]
Clone the _04 test and also check const_iterators.
Wolfgang Bangerth [Mon, 9 Mar 2015 05:11:44 +0000 (00:11 -0500)]
Ensure that we can run iterators over Trilinos matrices that are not stored locally.
Wolfgang Bangerth [Mon, 9 Mar 2015 03:22:16 +0000 (22:22 -0500)]
Update comments.
In particular, avoid unclear use of language for end() iterators, and
avoid references to the STL that only old-timers still
understand. Also talk about the semantics in the parallel context.
Wolfgang Bangerth [Mon, 9 Mar 2015 03:13:33 +0000 (22:13 -0500)]
Update comments.
In particular, avoid unclear use of language for end() iterators, and
avoid references to the STL that only old-timers still understand.
Wolfgang Bangerth [Sun, 8 Mar 2015 22:24:12 +0000 (17:24 -0500)]
Merge pull request #652 from drwells/step-20-compressed-sparsity
Use `BlockCompressedSparsityPattern` in step-20.
David Wells [Sat, 7 Mar 2015 15:58:29 +0000 (10:58 -0500)]
Use `BlockCompressedSparsityPattern` in step-20.
Step-20 now introduces the block compressed sparsity pattern. This
should close issue 306.
Wolfgang Bangerth [Fri, 27 Feb 2015 19:56:25 +0000 (13:56 -0600)]
Remove deprecated function TrilinosWrappers::SparseMatrix::compress() without argument.
Wolfgang Bangerth [Fri, 27 Feb 2015 19:56:11 +0000 (13:56 -0600)]
Remove deprecated function BlockMatrixBase::compress() without argument.
Wolfgang Bangerth [Fri, 27 Feb 2015 19:55:27 +0000 (13:55 -0600)]
Avoid calls to naked compress() without a VectorOperation argument.
Wolfgang Bangerth [Fri, 27 Feb 2015 19:42:38 +0000 (13:42 -0600)]
Remove a test.
This test mixes add and write access to a Trilinos sparse matrix. This does not work reliably and is, I think, not an operation we want to support as it cannot be done efficiently.
Timo Heister [Fri, 6 Mar 2015 21:07:27 +0000 (16:07 -0500)]
Merge pull request #651 from bangerth/doc-fixes-11
Update documentation in a small way.
Wolfgang Bangerth [Fri, 6 Mar 2015 21:00:52 +0000 (15:00 -0600)]
Update documentation in a small way.
Timo Heister [Thu, 5 Mar 2015 23:16:36 +0000 (18:16 -0500)]
Merge pull request #649 from bangerth/doc-fixes-10
Doc fixes 10
Wolfgang Bangerth [Thu, 5 Mar 2015 22:55:35 +0000 (16:55 -0600)]
Provide a reference to step-14.
Wolfgang Bangerth [Thu, 5 Mar 2015 22:45:40 +0000 (16:45 -0600)]
Significantly improve an error message.
Addresses #610.
Wolfgang Bangerth [Thu, 5 Mar 2015 22:06:13 +0000 (16:06 -0600)]
Merge pull request #648 from QiaoLei-88/step33DocIssue
Step33 doc issue (#646)
Wolfgang Bangerth [Thu, 5 Mar 2015 22:00:27 +0000 (16:00 -0600)]
Fix a typo.
Lei Qiao [Thu, 5 Mar 2015 17:53:37 +0000 (11:53 -0600)]
correct type of output example from 'code' to 'verbatim'
Lei Qiao [Thu, 5 Mar 2015 17:46:59 +0000 (11:46 -0600)]
fix mathbf and braces issues
Martin Kronbichler [Thu, 5 Mar 2015 07:14:27 +0000 (08:14 +0100)]
Merge pull request #647 from QiaoLei-88/fixStep33Intro
fix formula error in intro and result parts of step-33 #646
Lei Qiao [Thu, 5 Mar 2015 04:33:09 +0000 (22:33 -0600)]
fix bracket mismatch in result part of step-33
Lei Qiao [Thu, 5 Mar 2015 04:12:03 +0000 (22:12 -0600)]
fix formula error in intro of step-33 #646
Timo Heister [Thu, 5 Mar 2015 02:36:35 +0000 (21:36 -0500)]
Merge pull request #640 from bangerth/further-exception-cleanups-2
More exception cleanups
Wolfgang Bangerth [Wed, 4 Mar 2015 13:33:12 +0000 (07:33 -0600)]
One more exception conversion.
Wolfgang Bangerth [Wed, 4 Mar 2015 02:42:00 +0000 (20:42 -0600)]
Avoid exceptions that take references to their arguments -- it's not clear that this would work reliably.
Wolfgang Bangerth [Wed, 4 Mar 2015 23:03:56 +0000 (17:03 -0600)]
Merge pull request #645 from rosskynch/fix_642
Fix issue #642
Ross Kynch [Wed, 4 Mar 2015 16:49:18 +0000 (16:49 +0000)]
Removed p=3 case as it takes far too long to run (issue #642). Test is still valid as the solution should be exact at p=2
Wolfgang Bangerth [Wed, 4 Mar 2015 16:30:27 +0000 (10:30 -0600)]
Explain the use of operator| for the update_* flags.
Wolfgang Bangerth [Wed, 4 Mar 2015 16:26:18 +0000 (10:26 -0600)]
Merge pull request #643 from tjhei/fe_field_fct_exc
Use and document VectorTools::ExcPointNotAvailableHere
Timo Heister [Wed, 4 Mar 2015 15:56:57 +0000 (10:56 -0500)]
Use and document VectorTools::ExcPointNotAvailableHere
ExcPointNotAvailableHere is duplicated in VectorTools and
FEFieldFunction and is awkward to use in the latter because of the
template arguments.
- provide textual description of Exception
- deprecate the version in FEFieldFunction
- update documentation
- update test
Wolfgang Bangerth [Wed, 4 Mar 2015 13:32:19 +0000 (07:32 -0600)]
Merge pull request #639 from bangerth/clarify-step-8
Clarify a statement in the documentation of step-8.
Wolfgang Bangerth [Wed, 4 Mar 2015 00:49:54 +0000 (18:49 -0600)]
Clarify a statement in the documentation of step-8.
Wolfgang Bangerth [Wed, 4 Mar 2015 02:40:05 +0000 (20:40 -0600)]
Provide a changes.h entry.
Wolfgang Bangerth [Wed, 4 Mar 2015 02:37:30 +0000 (20:37 -0600)]
Minor code cleanup.
Wolfgang Bangerth [Wed, 4 Mar 2015 02:36:48 +0000 (20:36 -0600)]
More improvements on exceptions with no message.
Wolfgang Bangerth [Mon, 2 Mar 2015 18:51:24 +0000 (12:51 -0600)]
Merge pull request #631 from davydden/tensor
Extra functionality of Tensor class
Denis Davydov [Wed, 4 Feb 2015 14:20:03 +0000 (15:20 +0100)]
allow contraction of tensors of different base type
Wolfgang Bangerth [Mon, 2 Mar 2015 16:53:27 +0000 (10:53 -0600)]
Merge pull request #634 from bangerth/revert-previous-commit
Revert commit
e86e602ae14 .
Wolfgang Bangerth [Mon, 2 Mar 2015 16:52:20 +0000 (10:52 -0600)]
Revert commit
e86e602ae14 .
This undoes the changes of commit
13796ae50a7ac24 (through issue #621) that don't compile of their own.
Wolfgang Bangerth [Mon, 2 Mar 2015 15:14:59 +0000 (09:14 -0600)]
Merge pull request #632 from davydden/error_estimator
templating ParallelData in error_estimator
Martin Kronbichler [Mon, 2 Mar 2015 15:11:25 +0000 (16:11 +0100)]
Merge pull request #633 from bangerth/accelerate-indent
Accelerate indent
Wolfgang Bangerth [Mon, 2 Mar 2015 15:07:35 +0000 (09:07 -0600)]
Indent files that had been forgotten by the indentation script.
Wolfgang Bangerth [Mon, 2 Mar 2015 15:06:55 +0000 (09:06 -0600)]
Accelerate indentation of all files from 7 to 1.1 seconds.
Denis Davydov [Wed, 4 Feb 2015 14:20:16 +0000 (15:20 +0100)]
patched error_estimator
Timo Heister [Mon, 2 Mar 2015 14:47:55 +0000 (09:47 -0500)]
Merge pull request #630 from bangerth/fix-symmetric-tensor-product-type
Add ProductType description also for SymmetricTensor. Address issue #600
Wolfgang Bangerth [Mon, 2 Mar 2015 14:45:46 +0000 (08:45 -0600)]
Add ProductType description also for SymmetricTensor.
Wolfgang Bangerth [Mon, 2 Mar 2015 14:42:53 +0000 (08:42 -0600)]
Merge pull request #625 from bangerth/further-exception-cleanups
Further additions of error texts for exceptions.
Wolfgang Bangerth [Mon, 2 Mar 2015 14:43:10 +0000 (08:43 -0600)]
Improve error message according to Martin K's suggestions.
Timo Heister [Mon, 2 Mar 2015 14:39:40 +0000 (09:39 -0500)]
Merge pull request #629 from kronbichler/master
Work around bug in clang-3.6 with AVX.
Martin Kronbichler [Mon, 2 Mar 2015 14:31:47 +0000 (15:31 +0100)]
Work around bug in clang-3.6 with AVX.
Timo Heister [Mon, 2 Mar 2015 13:04:12 +0000 (08:04 -0500)]
Merge pull request #628 from kronbichler/master
Make step-33 compile without C++11
Martin Kronbichler [Mon, 2 Mar 2015 12:57:21 +0000 (13:57 +0100)]
Avoid compiler warning
Martin Kronbichler [Mon, 2 Mar 2015 12:55:25 +0000 (13:55 +0100)]
Make compile without C++11
Timo Heister [Mon, 2 Mar 2015 12:35:54 +0000 (07:35 -0500)]
Merge pull request #627 from kronbichler/master
Fix compiler warnings with clang 3.6. Comparing the address of a reference to an object with the zero pointer like in
&dof_handler.get_fe() != 0
will always evaluate to true. Thus, these assertions do not make sense and clang rightfully complains.
Martin Kronbichler [Mon, 2 Mar 2015 09:47:16 +0000 (10:47 +0100)]
Fix compiler warnings with clang 3.6.
Comparing the address of a reference to an object with the zero pointer like in
&dof_handler.get_fe() != 0
will always evaluate to true. Thus, these assertions do not make sense and clang is right to complain.
Matthias Maier [Mon, 2 Mar 2015 09:25:29 +0000 (10:25 +0100)]
Merge pull request #626 from rosskynch/cmake_bugfix_umfpack
Fix include bug when using bundled umfpack
Martin Kronbichler [Mon, 2 Mar 2015 09:01:05 +0000 (10:01 +0100)]
Merge pull request #624 from bangerth/minor-vector-cleanups
Minor vector cleanups
Wolfgang Bangerth [Mon, 2 Mar 2015 00:49:04 +0000 (18:49 -0600)]
Convert several more DeclException0 to DeclExceptionMsg.
Ross Kynch [Sun, 1 Mar 2015 19:10:19 +0000 (19:10 +0000)]
Fix issue when using the bundled umfpack - cmake moves all headers to a single directory where this header file includes a relative directory (../../AMD/Include)
Wolfgang Bangerth [Sun, 1 Mar 2015 19:07:37 +0000 (13:07 -0600)]
Fix another occurrence of allocate() in the serialization load function.
This also uncovers a memory leak we had.
Wolfgang Bangerth [Sun, 1 Mar 2015 16:20:47 +0000 (10:20 -0600)]
Ensure we don't create a memory leak.
Wolfgang Bangerth [Sun, 1 Mar 2015 16:18:16 +0000 (10:18 -0600)]
Since all arguments to Vector::allocate() are the same, remove it.
Wolfgang Bangerth [Sun, 1 Mar 2015 16:15:19 +0000 (10:15 -0600)]
Move assertion whether we are out of memory to the location where we allocate it.
Wolfgang Bangerth [Sun, 1 Mar 2015 17:04:36 +0000 (11:04 -0600)]
Provide a number of exceptions with explanatory text.
Wolfgang Bangerth [Sun, 1 Mar 2015 16:37:47 +0000 (10:37 -0600)]
Convert Assert(...,ExcIO()) to AssertThrow(...,ExcIO()).
Wolfgang Bangerth [Sun, 1 Mar 2015 16:22:38 +0000 (10:22 -0600)]
Provide ExcDivideByZero with some explanatory text.
Timo Heister [Sun, 1 Mar 2015 16:46:58 +0000 (11:46 -0500)]
Merge pull request #623 from tjhei/simd_intel_part2
move EnableOpenMPSimdFor struct into parallel.h so it is public
use in tests/lac/intel-15-bug
Timo Heister [Sat, 28 Feb 2015 22:20:20 +0000 (17:20 -0500)]
move EnableOpenMPSimdFor to parallel.h, update test
- move EnableOpenMPSimdFor struct into parallel.h so it is public
- use in tests/lac/intel-15-bug
Timo Heister [Sun, 1 Mar 2015 16:02:38 +0000 (11:02 -0500)]
Merge pull request #620 from bangerth/introduce-DeclExceptionMsg
Introduce DeclExceptionMsg.
Wolfgang Bangerth [Sat, 28 Feb 2015 20:59:44 +0000 (14:59 -0600)]
Convert ExcInternalError to DeclExceptionMsg.
Wolfgang Bangerth [Sat, 28 Feb 2015 03:45:04 +0000 (21:45 -0600)]
Introduce DeclExceptionMsg.
Timo Heister [Sat, 28 Feb 2015 22:09:00 +0000 (17:09 -0500)]
Merge pull request #619 from bangerth/remove-exceptions-without-arguments-4
More work to make exceptions more meaningful.
Wolfgang Bangerth [Sat, 28 Feb 2015 21:10:18 +0000 (15:10 -0600)]
Merge pull request #622 from drwells/remove-deprecated-mpi-macro
Remove use of `DEAL_II_COMPILER_SUPPORTS_MPI`.
David Wells [Sat, 28 Feb 2015 16:09:42 +0000 (11:09 -0500)]
Remove use of `DEAL_II_COMPILER_SUPPORTS_MPI`.
This macro was removed in favor of `DEAL_II_WITH_MPI` in early 2015;
see `doc/news/changes.h` for more information.
Wolfgang Bangerth [Sat, 28 Feb 2015 13:44:36 +0000 (07:44 -0600)]
Merge pull request #608 from tjhei/no_long_double_simd
[WIP] Disabled SIMD vector operations for certain types
Timo Heister [Thu, 26 Feb 2015 14:14:11 +0000 (09:14 -0500)]
Disable SIMD vector operations for certain types
Disable long double SIMD instructions on ICC. This is to work around a
bug that generates wrong code at least up to intel 15 (see tests/lac
/vector-vector, tests/lac/intel-15-bug, and the discussion at
https://github.com/dealii/dealii/issues/598).
Wolfgang Bangerth [Sat, 28 Feb 2015 02:14:43 +0000 (20:14 -0600)]
More work to make exceptions more meaningful.
Wolfgang Bangerth [Sat, 28 Feb 2015 02:08:16 +0000 (20:08 -0600)]
Merge pull request #614 from bangerth/remove-exceptions-without-arguments-2
Significantly improve another exception that currently does not print any text.
Wolfgang Bangerth [Sat, 28 Feb 2015 02:09:46 +0000 (20:09 -0600)]
Address Timo's concerns during review.
Timo Heister [Fri, 27 Feb 2015 21:14:48 +0000 (16:14 -0500)]
Merge pull request #618 from bangerth/remove-exceptions-without-argument-3
Remove assertion without argument.
Specifically, replace ExcNumberNotFinite with a way to provide both this number and a (lengthy) explanation of what may possibly have caused this problem.
Wolfgang Bangerth [Fri, 27 Feb 2015 20:37:52 +0000 (14:37 -0600)]
Remove assertion without argument.
Specifically, replace ExcNumberNotFinite with a way to provide both this number and a (lengthy) explanation of what may possibly have caused this problem. I see my students struggle with this error.
Wolfgang Bangerth [Fri, 27 Feb 2015 19:21:59 +0000 (13:21 -0600)]
Merge pull request #615 from tjhei/add_interpolate_assert
add size assert to VectorTools::interpolate
Timo Heister [Fri, 27 Feb 2015 19:11:29 +0000 (14:11 -0500)]
add size assert to VectorTools::interpolate
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